Epo encodes mouse erythropoietin, a secreted glycoprotein cytokine hormone of the EPO/TPO family. The mature ligand is produced mainly by kidney in adult mammals and liver in fetal or neonatal contexts, is induced by hypoxia-regulated HIF signaling, and circulates to erythroid progenitors where it binds EPOR and activates JAK2/STAT and MAPK-linked signaling. The core supported function is endocrine receptor-ligand control of definitive erythropoiesis: survival, proliferation, differentiation, maturation, and hemoglobinization of erythroid cells. Many automated response, neural, immune, cardiac-development, cell-surface, and generic transcription annotations reflect downstream or non-core contexts and should not obscure the primary EPOR ligand function.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0005128
erythropoietin receptor binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo directly functions as the ligand for the erythropoietin receptor.
Reason: EPOR binding is the precise molecular function that initiates Epo signaling and erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
Reactome:R-MMU-9006326
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating event in erythropoietin signaling.
|
|
GO:0005179
hormone activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
Reason: Hormone activity accurately captures the circulating endocrine role of Epo, though receptor binding is the more precise MF.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
|
|
GO:0030218
erythrocyte differentiation
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
Reason: Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is central to the gene function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0030295
protein kinase activator activity
|
IBA
GO_REF:0000033 |
MODIFY |
Summary: Epo activates kinase cascades indirectly through EPOR, but protein kinase activator activity is not the best direct MF term.
Reason: The ligand directly binds EPOR; kinase activation is a downstream BP consequence of receptor signaling rather than an independent protein kinase activator molecular activity. Positive regulation of protein kinase activity remains valid as pathway context, but it is a BP term and should not be proposed as a replacement for this MF annotation.
Proposed replacements:
erythropoietin receptor binding
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0038162
erythropoietin-mediated signaling pathway
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
Reason: This is the pathway named for the ligand and is the correct BP context for downstream JAK2/STAT, PI3K, RAS, and ERK events.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0097696
cell surface receptor signaling pathway via STAT
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream of JAK2.
Reason: STAT signaling is a canonical immediate branch of Epo receptor activation and is part of the core pathway.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0005125
cytokine activity
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
Reason: Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival evidence.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
proliferation and survival of erythroid cells in response to Epo
|
|
GO:0005615
extracellular space
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: Epo is secreted and acts in the extracellular space.
Reason: Extracellular space is the appropriate core location for the circulating ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005128
erythropoietin receptor binding
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Epo directly functions as the ligand for the erythropoietin receptor.
Reason: EPOR binding is the precise molecular function that initiates Epo signaling and erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
Reactome:R-MMU-9006326
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating event in erythropoietin signaling.
|
|
GO:0005179
hormone activity
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
Reason: Hormone activity accurately captures the circulating endocrine role of Epo, though receptor binding is the more precise MF.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
|
|
GO:0005576
extracellular region
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0006950
response to stress
|
IEA
GO_REF:0000117 |
MARK AS OVER ANNOTATED |
Summary: Response to stress is too broad for the supported Epo function.
Reason: The stress connection is better captured by hypoxia-regulated Epo production and erythropoietic response rather than a generic response-to-stress annotation.
Supporting Evidence:
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
PMID:17981124
embryos show severe fetal anemia stemming from deficient erythropoietin (Epo)
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing interstitial cells.
|
|
GO:0043249
erythrocyte maturation
|
IEA
GO_REF:0000043 |
ACCEPT |
Summary: Epo promotes erythrocyte maturation as part of its erythropoietic hormone function.
Reason: Maturation is consistent with UniProt keyword evidence and the Falcon synthesis of Epo as the principal erythroid growth and maturation factor.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: Generic RNA polymerase II transcription regulation is downstream of receptor signaling and too broad for Epo.
Reason: Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0005125
cytokine activity
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
Reason: Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival evidence.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
proliferation and survival of erythroid cells in response to Epo
|
|
GO:0005128
erythropoietin receptor binding
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo directly functions as the ligand for the erythropoietin receptor.
Reason: EPOR binding is the precise molecular function that initiates Epo signaling and erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
Reactome:R-MMU-9006326
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating event in erythropoietin signaling.
|
|
GO:0005179
hormone activity
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
Reason: Hormone activity accurately captures the circulating endocrine role of Epo, though receptor binding is the more precise MF.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
|
|
GO:0005615
extracellular space
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo is secreted and acts in the extracellular space.
Reason: Extracellular space is the appropriate core location for the circulating ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0008284
positive regulation of cell population proliferation
|
ISO
GO_REF:0000119 |
KEEP AS NON CORE |
Summary: Epo promotes proliferation of erythroid progenitors, but the term is broader than the core ligand function.
Reason: The annotation is directionally correct as an erythroid outcome but should be interpreted in the erythropoietic context, not as generic proliferation across cell types.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0009986
cell surface
|
ISO
GO_REF:0000119 |
REMOVE |
Summary: Cell surface localization is not supported for Epo as a secreted ligand.
Reason: Epo acts on cell-surface EPOR after secretion, but the Epo protein itself is not a membrane or cell-surface resident protein in UniProt or Falcon.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0010523
negative regulation of calcium ion transport into cytosol
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of calcium ion transport into cytosol is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0030218
erythrocyte differentiation
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
Reason: Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is central to the gene function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0038162
erythropoietin-mediated signaling pathway
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
Reason: This is the pathway named for the ligand and is the correct BP context for downstream JAK2/STAT, PI3K, RAS, and ERK events.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: Generic RNA polymerase II transcription regulation is downstream of receptor signaling and too broad for Epo.
Reason: Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0046579
positive regulation of Ras protein signal transduction
|
ISO
GO_REF:0000119 |
KEEP AS NON CORE |
Summary: RAS activation is a recognized downstream branch of Epo signaling.
Reason: This captures a downstream pathway module, whereas the core function remains EPOR ligand activity and erythropoietin-mediated signaling.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
Reactome:R-MMU-9029152
Reactome models Epo:Epor:JAK2-linked complexes mediating GDP-GTP exchange on Ras.
|
|
GO:0071474
cellular hyperosmotic response
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: cellular hyperosmotic response is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0097696
cell surface receptor signaling pathway via STAT
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream of JAK2.
Reason: STAT signaling is a canonical immediate branch of Epo receptor activation and is part of the core pathway.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:1902219
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:1902251
negative regulation of erythrocyte apoptotic process
|
ISO
GO_REF:0000119 |
ACCEPT |
Summary: Epo prevents apoptosis of erythroid cells during erythropoiesis.
Reason: Erythroid survival is a core biological effect of Epo/EPOR signaling.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0000122
negative regulation of transcription by RNA polymerase II
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: Generic RNA polymerase II transcription regulation is downstream of receptor signaling and too broad for Epo.
Reason: Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0001666
response to hypoxia
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: Epo expression and systemic Epo response are hypoxia-regulated.
Reason: Hypoxia is a major upstream regulator and physiological context for Epo production, but the gene product function is the secreted hormone signal.
Supporting Evidence:
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
PMID:17981124
embryos show severe fetal anemia stemming from deficient erythropoietin (Epo)
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing interstitial cells.
|
|
GO:0005125
cytokine activity
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
Reason: Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival evidence.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
proliferation and survival of erythroid cells in response to Epo
|
|
GO:0005615
extracellular space
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: Epo is secreted and acts in the extracellular space.
Reason: Extracellular space is the appropriate core location for the circulating ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0006953
acute-phase response
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: acute-phase response is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0007584
response to nutrient
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to nutrient is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0008284
positive regulation of cell population proliferation
|
IEA
GO_REF:0000120 |
KEEP AS NON CORE |
Summary: Epo promotes proliferation of erythroid progenitors, but the term is broader than the core ligand function.
Reason: The annotation is directionally correct as an erythroid outcome but should be interpreted in the erythropoietic context, not as generic proliferation across cell types.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0009651
response to salt stress
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to salt stress is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0009986
cell surface
|
IEA
GO_REF:0000107 |
REMOVE |
Summary: Cell surface localization is not supported for Epo as a secreted ligand.
Reason: Epo acts on cell-surface EPOR after secretion, but the Epo protein itself is not a membrane or cell-surface resident protein in UniProt or Falcon.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0010523
negative regulation of calcium ion transport into cytosol
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of calcium ion transport into cytosol is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0010976
positive regulation of neuron projection development
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neuron projection development reflects non-erythroid neurotrophic contexts rather than the conserved core Epo function.
Reason: Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation is automated/orthology-derived and not supported as a primary mouse Epo function here.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0030218
erythrocyte differentiation
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
Reason: Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is central to the gene function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0032496
response to lipopolysaccharide
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to lipopolysaccharide is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0033189
response to vitamin A
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to vitamin A is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0033574
response to testosterone
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to testosterone is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0038162
erythropoietin-mediated signaling pathway
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
Reason: This is the pathway named for the ligand and is the correct BP context for downstream JAK2/STAT, PI3K, RAS, and ERK events.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0042104
positive regulation of activated T cell proliferation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: Activated T cell proliferation is not supported as a core mouse Epo function in the reviewed evidence.
Reason: This transferred immune term is outside the canonical EPOR ligand role in erythropoiesis and lacks direct support in UniProt/Falcon/local publications.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0043627
response to estrogen
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to estrogen is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0044297
cell body
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: Cell body localization is not a supported core location for mouse Epo.
Reason: The core location is extracellular/secreted; cell body appears to be transferred from non-canonical contexts and should not be treated as a general Epo localization.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0045666
positive regulation of neuron differentiation
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neuron differentiation reflects non-erythroid neurotrophic contexts rather than the conserved core Epo function.
Reason: Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation is automated/orthology-derived and not supported as a primary mouse Epo function here.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0045893
positive regulation of DNA-templated transcription
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: Generic RNA polymerase II transcription regulation is downstream of receptor signaling and too broad for Epo.
Reason: Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0046579
positive regulation of Ras protein signal transduction
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: RAS activation is a recognized downstream branch of Epo signaling.
Reason: This captures a downstream pathway module, whereas the core function remains EPOR ligand activity and erythropoietin-mediated signaling.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
Reactome:R-MMU-9029152
Reactome models Epo:Epor:JAK2-linked complexes mediating GDP-GTP exchange on Ras.
|
|
GO:0048678
response to axon injury
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to axon injury is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0051602
response to electrical stimulus
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to electrical stimulus is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0055093
response to hyperoxia
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to hyperoxia is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0070374
positive regulation of ERK1 and ERK2 cascade
|
IEA
GO_REF:0000107 |
KEEP AS NON CORE |
Summary: ERK1/2 activation can occur downstream of Epo signaling but is not the primary annotation level for Epo.
Reason: MAPK/ERK is a downstream branch of Epo/EPOR signaling, best retained as non-core rather than as the defining function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0070555
response to interleukin-1
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to interleukin-1 is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0071474
cellular hyperosmotic response
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: cellular hyperosmotic response is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0071548
response to dexamethasone
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: response to dexamethasone is a broad stimulus-response annotation transferred from automated evidence.
Reason: The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling, not this broad stimulus-response term as an Epo function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0097696
cell surface receptor signaling pathway via STAT
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream of JAK2.
Reason: STAT signaling is a canonical immediate branch of Epo receptor activation and is part of the core pathway.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:1902219
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress
|
IEA
GO_REF:0000107 |
MARK AS OVER ANNOTATED |
Summary: negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress is an osmotic/calcium-stress transfer that is not part of the core mouse Epo function.
Reason: These annotations likely derive from context-specific non-erythroid or cellular-stress experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis as primary Epo biology.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:1902251
negative regulation of erythrocyte apoptotic process
|
IEA
GO_REF:0000107 |
ACCEPT |
Summary: Epo prevents apoptosis of erythroid cells during erythropoiesis.
Reason: Erythroid survival is a core biological effect of Epo/EPOR signaling.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0005615
extracellular space
|
ISO
GO_REF:0000096 |
ACCEPT |
Summary: Epo is secreted and acts in the extracellular space.
Reason: Extracellular space is the appropriate core location for the circulating ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0008284
positive regulation of cell population proliferation
|
ISO
GO_REF:0000096 |
KEEP AS NON CORE |
Summary: Epo promotes proliferation of erythroid progenitors, but the term is broader than the core ligand function.
Reason: The annotation is directionally correct as an erythroid outcome but should be interpreted in the erythropoietic context, not as generic proliferation across cell types.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0010976
positive regulation of neuron projection development
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neuron projection development reflects non-erythroid neurotrophic contexts rather than the conserved core Epo function.
Reason: Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation is automated/orthology-derived and not supported as a primary mouse Epo function here.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0042104
positive regulation of activated T cell proliferation
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: Activated T cell proliferation is not supported as a core mouse Epo function in the reviewed evidence.
Reason: This transferred immune term is outside the canonical EPOR ligand role in erythropoiesis and lacks direct support in UniProt/Falcon/local publications.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0044297
cell body
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: Cell body localization is not a supported core location for mouse Epo.
Reason: The core location is extracellular/secreted; cell body appears to be transferred from non-canonical contexts and should not be treated as a general Epo localization.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0045666
positive regulation of neuron differentiation
|
ISO
GO_REF:0000096 |
MARK AS OVER ANNOTATED |
Summary: positive regulation of neuron differentiation reflects non-erythroid neurotrophic contexts rather than the conserved core Epo function.
Reason: Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation is automated/orthology-derived and not supported as a primary mouse Epo function here.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0070374
positive regulation of ERK1 and ERK2 cascade
|
ISO
GO_REF:0000096 |
KEEP AS NON CORE |
Summary: ERK1/2 activation can occur downstream of Epo signaling but is not the primary annotation level for Epo.
Reason: MAPK/ERK is a downstream branch of Epo/EPOR signaling, best retained as non-core rather than as the defining function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
ISO
GO_REF:0000119 |
MARK AS OVER ANNOTATED |
Summary: Proteasome-mediated ubiquitin-dependent protein catabolism is not a supported Epo function.
Reason: This appears to be an indirect transferred pathway context, not a process performed or directly controlled by the secreted Epo ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte proliferation and differentiation, and secreted localization.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity in definitive erythropoiesis, while non-erythroid response and development terms are context-specific or less directly supported.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9006326 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9006327 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9006329 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9012652 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9012653 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9012656 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9027266 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9027268 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9027429 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9027436 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9029146 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9029147 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9029152 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9029162 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9030346 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9030353 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005576
extracellular region
|
TAS
Reactome:R-MMU-9032476 |
ACCEPT |
Summary: Epo is an extracellular secreted ligand.
Reason: Extracellular region is correct, although extracellular space is the more specific location used for the core function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
|
GO:0005128
erythropoietin receptor binding
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Epo directly functions as the ligand for the erythropoietin receptor.
Reason: EPOR binding is the precise molecular function that initiates Epo signaling and erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
Reactome:R-MMU-9006326
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating event in erythropoietin signaling.
|
|
GO:0038162
erythropoietin-mediated signaling pathway
|
ISS
GO_REF:0000024 |
ACCEPT |
Summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
Reason: This is the pathway named for the ligand and is the correct BP context for downstream JAK2/STAT, PI3K, RAS, and ERK events.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0033033
negative regulation of myeloid cell apoptotic process
|
IDA
PMID:17981124 SUMO-specific protease 1 is essential for stabilization of H... |
MODIFY |
Summary: The SENP1/HIF paper supports deficient Epo production causing fetal anemia, not broad myeloid apoptosis as a direct Epo annotation.
Reason: The defensible Epo terms are erythroid differentiation and negative regulation of erythrocyte apoptosis, not broad myeloid apoptosis.
Proposed replacements:
erythrocyte differentiation
negative regulation of erythrocyte apoptotic process
Supporting Evidence:
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
PMID:17981124
embryos show severe fetal anemia stemming from deficient erythropoietin (Epo)
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing interstitial cells.
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0018105
peptidyl-serine phosphorylation
|
IDA
PMID:21095239 Phosphorylation of Bcl-associated death protein (Bad) by ery... |
MODIFY |
Summary: Epo does not catalyze peptidyl-serine phosphorylation; it stimulates kinases that phosphorylate substrates such as Bad.
Reason: PMID:21095239 attributes Bad phosphorylation to Epo-activated JNK1, not to Epo as an enzyme. The correct curation is positive regulation of kinase activity and erythroid cell survival.
Proposed replacements:
positive regulation of protein kinase activity
negative regulation of erythrocyte apoptotic process
Supporting Evidence:
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-uniprot.txt
Binds to EPOR leading to EPOR dimerization and JAK2 activation.
|
|
GO:0030295
protein kinase activator activity
|
IDA
PMID:21095239 Phosphorylation of Bcl-associated death protein (Bad) by ery... |
MODIFY |
Summary: Epo activates kinase cascades indirectly through EPOR, but protein kinase activator activity is not the best direct MF term.
Reason: The ligand directly binds EPOR; kinase activation is a downstream BP consequence of receptor signaling rather than an independent protein kinase activator molecular activity. Positive regulation of protein kinase activity remains valid as pathway context, but it is a BP term and should not be proposed as a replacement for this MF annotation.
Proposed replacements:
erythropoietin receptor binding
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0043066
negative regulation of apoptotic process
|
IDA
PMID:21095239 Phosphorylation of Bcl-associated death protein (Bad) by ery... |
MODIFY |
Summary: Epo has anti-apoptotic effects, but the broad apoptotic-process term should be narrowed to erythroid survival where supported.
Reason: The strongest supported context is negative regulation of apoptosis in Epo-dependent erythroid cells, already represented by the more specific erythrocyte apoptotic-process term.
Proposed replacements:
negative regulation of erythrocyte apoptotic process
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0045860
positive regulation of protein kinase activity
|
IDA
PMID:21095239 Phosphorylation of Bcl-associated death protein (Bad) by ery... |
ACCEPT |
Summary: Epo signaling positively regulates downstream kinase activity after EPOR engagement.
Reason: JAK2, JNK1, and MAPK-family activation are supported downstream of Epo/EPOR signaling.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK signaling that coordinate erythroid survival, proliferation, and differentiation.
|
|
GO:0005128
erythropoietin receptor binding
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
ACCEPT |
Summary: Epo directly functions as the ligand for the erythropoietin receptor.
Reason: EPOR binding is the precise molecular function that initiates Epo signaling and erythroid outcomes.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
Reactome:R-MMU-9006326
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating event in erythropoietin signaling.
|
|
GO:0001525
angiogenesis
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
KEEP AS NON CORE |
Summary: Angiogenic effects of Epo are plausible but secondary and not the defining mouse Epo function.
Reason: The cached source is review-level and Falcon treats non-erythroid tissue effects as context-dependent; retain only as non-core pending stronger direct mouse evidence.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0003007
heart morphogenesis
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
MARK AS OVER ANNOTATED |
Summary: heart morphogenesis is too specific and developmental for the evidence available in this review.
Reason: The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis as the supported core function.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0055008
cardiac muscle tissue morphogenesis
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
MARK AS OVER ANNOTATED |
Summary: cardiac muscle tissue morphogenesis is too specific and developmental for the evidence available in this review.
Reason: The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis as the supported core function.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0055010
ventricular cardiac muscle tissue morphogenesis
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
MARK AS OVER ANNOTATED |
Summary: ventricular cardiac muscle tissue morphogenesis is too specific and developmental for the evidence available in this review.
Reason: The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis as the supported core function.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0060979
vasculogenesis involved in coronary vascular morphogenesis
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
MARK AS OVER ANNOTATED |
Summary: vasculogenesis involved in coronary vascular morphogenesis is too specific and developmental for the evidence available in this review.
Reason: The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis as the supported core function.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0061032
visceral serous pericardium development
|
TAS
PMID:20299672 Epicardial-myocardial signaling directing coronary vasculoge... |
MARK AS OVER ANNOTATED |
Summary: visceral serous pericardium development is too specific and developmental for the evidence available in this review.
Reason: The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis as the supported core function.
Supporting Evidence:
PMID:20299672
mediated in part by secreted growth factors
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary to the core endocrine erythropoiesis function.
|
|
GO:0006357
regulation of transcription by RNA polymerase II
|
IDA
PMID:17300687 Erythropoietin contributes to implantation: ectopic hemoglob... |
MODIFY |
Summary: Epo signaling can regulate hemoglobin-related gene expression in decidual cells, but this broad transcription term overstates the direct function.
Reason: The PMID:17300687 evidence is better represented as Epo-dependent hemoglobin biosynthesis and decidual survival, downstream of receptor signaling.
Proposed replacements:
hemoglobin biosynthetic process
embryo implantation
Supporting Evidence:
PMID:17300687
destroyed Hb-containing cells and resulted in apoptosis
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation as a downstream biological outcome of EPOR signaling.
|
|
GO:0006915
apoptotic process
|
IDA
PMID:17300687 Erythropoietin contributes to implantation: ectopic hemoglob... |
MODIFY |
Summary: The decidual evidence concerns apoptosis after Epo signaling blockade, so the direction should be anti-apoptotic rather than generic apoptotic process.
Reason: Epo signaling supports survival; use negative regulation of apoptotic process instead of the broad apoptotic process term.
Proposed replacements:
negative regulation of apoptotic process
Supporting Evidence:
PMID:17300687
destroyed Hb-containing cells and resulted in apoptosis
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation as a downstream biological outcome of EPOR signaling.
|
|
GO:0007566
embryo implantation
|
IDA
PMID:17300687 Erythropoietin contributes to implantation: ectopic hemoglob... |
KEEP AS NON CORE |
Summary: Epo contributes to mouse implantation through decidual-cell hemoglobin synthesis and survival.
Reason: The PMID:17300687 evidence supports this developmental context, but it is not the core conserved function of Epo.
Supporting Evidence:
PMID:17300687
destroyed Hb-containing cells and resulted in apoptosis
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation as a downstream biological outcome of EPOR signaling.
|
|
GO:0042541
hemoglobin biosynthetic process
|
IDA
PMID:17300687 Erythropoietin contributes to implantation: ectopic hemoglob... |
KEEP AS NON CORE |
Summary: Epo signaling promotes hemoglobin synthesis in erythroid and decidual contexts.
Reason: Hemoglobin synthesis is a downstream outcome of Epo signaling, not a molecular function of Epo itself.
Supporting Evidence:
PMID:17300687
destroyed Hb-containing cells and resulted in apoptosis
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation as a downstream biological outcome of EPOR signaling.
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0030218
erythrocyte differentiation
|
IDA
PMID:15591122 BMP4 and Madh5 regulate the erythroid response to acute anem... |
ACCEPT |
Summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
Reason: Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is central to the gene function.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Binds to EPOR leading to EPOR dimerization and JAK2 activation.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required for survival and terminal differentiation in definitive erythropoiesis.
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis, severe anemia, and embryonic lethality around E13-E13.5.
PMID:15591122
mobilization and differentiation of erythroid progenitors in the adult spleen
PMID:21095239
Epo-activated JNK1 phosphorylated Bad at threonine 201
|
|
GO:0001666
response to hypoxia
|
IDA
PMID:15016652 Superoxide dismutase-3 promotes full expression of the EPO r... |
KEEP AS NON CORE |
Summary: Epo expression and systemic Epo response are hypoxia-regulated.
Reason: Hypoxia is a major upstream regulator and physiological context for Epo production, but the gene product function is the secreted hormone signal.
Supporting Evidence:
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
PMID:17981124
embryos show severe fetal anemia stemming from deficient erythropoietin (Epo)
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing interstitial cells.
|
|
GO:0005615
extracellular space
|
IDA
PMID:15016652 Superoxide dismutase-3 promotes full expression of the EPO r... |
ACCEPT |
Summary: Epo is secreted and acts in the extracellular space.
Reason: Extracellular space is the appropriate core location for the circulating ligand.
Supporting Evidence:
file:mouse/Epo/Epo-uniprot.txt
SUBCELLULAR LOCATION: Secreted.
file:mouse/Epo/Epo-uniprot.txt
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal or neonatal mammals.
PMID:15016652
hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
file:mouse/Epo/Epo-deep-research-falcon.md
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing cells to act on marrow erythroid precursors.
|
Q: Which non-erythroid Epo annotations in mouse have direct endogenous-ligand evidence strong enough to keep in GO, and which should be retired as orthology-transfer over-annotations?
Suggested experts: erythropoietin signaling curators, mouse developmental biology curators
Q: Should GO annotation for Epo use erythropoietin receptor binding plus Epo-mediated signaling instead of protein kinase activator activity for ligand-driven JAK2 activation?
Suggested experts: GO molecular function curators, cytokine signaling experts
Q: Can the cardiac/coronary developmental TAS annotations from PMID:20299672 be traced to direct Epo-specific statements in full text, or should they be replaced by broader non-core angiogenesis context only?
Suggested experts: cardiovascular development curators, MGI/Reactome curators
Experiment: In primary mouse erythroid progenitors, perturb endogenous Epo or EPOR and measure JAK2, STAT5, ERK, and Bad phosphorylation together with survival and differentiation readouts.
Hypothesis: Epo core function is EPOR ligand activity that drives JAK2/STAT and survival signaling in erythroid progenitors.
Type: Endogenous ligand-receptor signaling assay
Experiment: Use Epo conditional loss or neutralization in candidate neural, immune, and cardiac contexts represented by transferred annotations, with rescue by physiological Epo, to test whether endogenous Epo is required for the annotated process.
Hypothesis: Most broad non-erythroid transferred annotations will not show a direct endogenous Epo requirement comparable to erythropoiesis.
Type: Context-specific non-erythroid validation
Experiment: Use endogenous tagging or validated antibodies in renal Epo-producing cells and erythroid target cells to distinguish intracellular production/secretory pathway signal from extracellular ligand and cell-surface receptor localization.
Hypothesis: Epo protein is secreted/extracellular, and cell-surface signal in GOA reflects EPOR-bound ligand or receptor localization rather than Epo as a membrane-resident protein.
Type: Secreted versus cell-surface localization check
provider: falcon
model: Edison Scientific Literature
cached: false
start_time: '2026-05-04T02:21:37.733588'
end_time: '2026-05-04T02:31:01.725127'
duration_seconds: 563.99
template_file: templates/gene_research_go_focused.md
template_variables:
organism: mouse
gene_id: Epo
gene_symbol: Epo
uniprot_accession: P07321
protein_description: 'RecName: Full=Erythropoietin; Flags: Precursor;'
gene_info: Name=Epo;
organism_full: Mus musculus (Mouse).
protein_family: Belongs to the EPO/TPO family. .
protein_domains: 4_helix_cytokine-like_core. (IPR009079); EPO/TPO_CS. (IPR019767);
EPO_TPO. (IPR001323); Erythroptn. (IPR003013); EPO_TPO (PF00758)
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BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'Epo' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene Epo (gene ID: Epo, UniProt: P07321) in mouse.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
Question: You are an expert researcher providing comprehensive, well-cited information.
Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies
Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.
BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.
DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'Epo' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information
Please provide a comprehensive research report on the gene Epo (gene ID: Epo, UniProt: P07321) in mouse.
The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.
You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.
We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.
We are interested in where in or outside the cell the gene product carries out its function.
We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.
Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.
The research target is mouse erythropoietin (Epo), a secreted glycoprotein cytokine hormone required for definitive erythropoiesis; the retrieved mouse developmental genetics and renal physiology literature consistently addresses Epo/EpoR signaling and embryonic phenotypes that align with the UniProt entry description (P07321; erythropoietin precursor) rather than an unrelated “Epo” symbol in another organism or context (lee2001erythropoietin(epo)and pages 4-5, halvorsen2002physiologyoferythropoietin pages 1-2).
EPO is the principal endocrine growth factor that promotes erythroid progenitor survival, proliferation, and maturation, supporting red blood cell production (erythropoiesis) (juul2000nonerythropoieticrolesof pages 1-4, halvorsen2002physiologyoferythropoietin pages 1-2). In mouse embryogenesis, EPO is essential for definitive erythropoiesis (fetal liver–derived erythropoiesis), while the initial emergence of primitive erythropoiesis in the yolk sac begins largely independently of EPO (lee2001erythropoietin(epo)and pages 4-5).
EPO is part of the hematopoietin/cytokine signaling system and is described in cytokine-receptor structure reviews as a “long cytokine” with long helices packed in an antiparallel arrangement—consistent with the canonical four-helix-bundle cytokine architecture typical for this class of ligands (bagley2001structuralandfunctional pages 2-4). The erythropoietin receptor (EPOR) is a simple homodimeric cytokine receptor, and ligand binding involves defined receptor “hot spots,” including a key hydrophobic contact residue Phe93 in an EPOR loop implicated in ligand binding (bagley2001structuralandfunctional pages 2-4).
Canonical site of production and secretion: A 2024 review focused on renal interstitial biology summarizes that EPO is mainly secreted by renal interstitial fibroblast-like cells in the kidney cortex—often termed renal EPO-producing (REP) cells—and then enters the circulation to act on erythroid precursor cells in bone marrow that express EPOR (suzuki2024crosstalkbetweenoxygen pages 1-2).
Emerging nuance—tubular EPO production: In a 2024 mouse kidney ischemia–reperfusion injury (IRI) model, prolonged roxadustat exposure (24 h) induced detectable Epo protein production within proximal and distal tubules by immunohistochemistry, whereas short hypoxia/short roxadustat predominantly induced interstitial/peritubular Epo production (yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6). This finding suggests that under some injury/drug-exposure conditions, renal epithelial compartments may contribute to Epo production (yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6).
EPOR lacks intrinsic kinase activity; upon EPO binding, EPOR dimerization/activation enables signaling through the cytoplasmic tyrosine kinase JAK2 (juul2000nonerythropoieticrolesof pages 1-4). Downstream, signaling involves phosphorylation cascades and activation of transcription factors such as STAT5A/STAT5B (halvorsen2002physiologyoferythropoietin pages 1-2).
A phosphoproteomics study of EPO-driven erythropoiesis emphasizes canonical EPO/EPOR signaling modules including JAK2/STAT5 and RAS/MEK/ERK (MAPK/ERK) and expands the network to additional EPO-regulated phosphorylation targets involved in adaptor function, cytoskeletal remodeling, and metabolism (held2020phosphoproteomicdiscoveryof pages 1-2). This work supports the view that EPO signaling is not limited to a single transcriptional axis but coordinates multiple cellular programs needed for proliferation, survival, and late-stage erythroid differentiation (held2020phosphoproteomicdiscoveryof pages 1-2).
A central regulatory principle is that Epo expression is strongly induced by hypoxia through the hypoxia-inducible factor (HIF) system in renal EPO-producing cells (suzuki2024crosstalkbetweenoxygen pages 1-2). In the 2024 review focused on REP cells, HIF-2α is described as the major activator of EPO gene expression in REP cells, while upstream prolyl hydroxylase domain (PHD) enzymes—requiring oxygen, Fe2+, and α-ketoglutarate—control HIF-α stability; PHD2 is highlighted as a dominant oxygen sensor controlling EPO via HIF2α hydroxylation (suzuki2024crosstalkbetweenoxygen pages 1-2). The same review emphasizes crosstalk with iron biology: iron availability can modulate HIF2α accumulation and thereby influence EPO induction (suzuki2024crosstalkbetweenoxygen pages 1-2).
Mouse genetic evidence strongly supports Epo’s essential role in definitive erythropoiesis. Epo and EpoR homozygous-null mice exhibit impaired definitive erythropoiesis with severe anemia and die around embryonic day E13–E13.5, demonstrating an essential requirement for this ligand–receptor system during development (lee2001erythropoietin(epo)and pages 4-5). Expression timing studies show Epo mRNA is detectable in the embryo proper (not yolk sac) beginning around E9.0, aligning with a role in supporting erythroid cell survival/expansion after circulation begins (lee2001erythropoietin(epo)and pages 4-5).
A mouse EpoR rescue/transgenic study provides quantitative EPOR binding parameters and receptor abundance:
- EPOR binding-site counts per bone-marrow mononuclear cell were ~67 (wild type), 71 (Tg-B), 27 (Rescued-B), and 83 (Rescued-A) (suzuki2002erythroidspecificexpressionof pages 6-8).
- Ligand-binding affinity (Kd) for recombinant human EPO was similar between rescued and wild type: 201 pM (rescued) vs 270 pM (wild type) (suzuki2002erythroidspecificexpressionof pages 6-8).
- Functional progenitor assays showed genotype-dependent sensitivity: high-EPOR expressors reached a CFU-E response plateau at 0.1 U/mL EPO, whereas low-expressor rescued progenitors required higher EPO concentrations (notably 1–10 U/mL) to increase colony formation (suzuki2002erythroidspecificexpressionof pages 8-9, suzuki2002erythroidspecificexpressionof pages 6-8).
In a 2024 mouse kidney IRI model, hypoxia and roxadustat produced large fold-changes in renal Epo protein induction:
- 4 h hypoxia (7% O2) increased interstitial cell–derived Epo production by ~75-fold before IRI.
- 4 h roxadustat increased interstitial cell–derived Epo production by ~6-fold before IRI.
- 24–72 h roxadustat pretreatment increased Epo production during IRI by ~9-fold, and immunohistochemistry localized inducible Epo to proximal and distal tubules with 24 h roxadustat (yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6).
A 2024 review synthesizes recent mechanistic understanding that renal interstitial fibroblast-like REP cells are the principal endocrine EPO source in the kidney cortex and that HIF-2α is the major transcriptional activator driving Epo in these cells; upstream PHD enzymes serve as oxygen/iron-dependent regulators (suzuki2024crosstalkbetweenoxygen pages 1-2). This framing aligns kidney EPO regulation with broader systemic iron control, emphasizing network-level regulation rather than single-gene control (suzuki2024crosstalkbetweenoxygen pages 1-2).
A 2024 experimental study reports that prolonged HIF-PHD inhibition (roxadustat) can induce tubular Epo expression and associates this with improved kidney function after IRI, whereas short hypoxia or short roxadustat that induces mainly interstitial Epo did not confer the same renoprotection in their model (yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6). This suggests a hypothesis that the site and timing of Epo production (tubular vs interstitial; peri-injury vs pre-injury) may be relevant for non-erythropoietic tissue outcomes—though this remains model- and context-dependent (yasuoka2024tubularendogenouserythropoietin pages 1-2).
A 2024 European Renal Best Practice clinical practice document describes HIF-PH inhibitors as mimicking hypoxia to induce HIF target genes that promote erythropoiesis via endogenous erythropoietin and iron-metabolism effects (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4). The guidance emphasizes that efficacy has been demonstrated in >30 phase 3 clinical trials and includes multiple quantitative endpoints in large randomized programs (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4).
EPO signaling is clinically leveraged through erythropoiesis-stimulating agents (ESAs) and, increasingly, through oral HIF-PH inhibitors that raise endogenous EPO. A clinical review in perinatology describes recombinant EPO dosing used clinically (e.g., 300–1400 U/kg/week) to increase red cell production and reduce transfusions in certain neonatal contexts (juul2000nonerythropoieticrolesof pages 1-4).
The 2024 practice document reports multiple large phase 3 programs. Examples of quantitative outcomes include:
- Pooled ANDES/OLYMPUS/ALPS analysis (n=4277) showing hemoglobin increase 1.9 vs 0.2 g/dL, response 80% vs 9%, and rescue therapy 9% vs 31% over 52 weeks (roxadustat vs placebo) (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4).
- ASCEND-ND (n=3872) showing daprodustat non-inferior to darbepoetin with a between-group hemoglobin difference 0.08 g/dL (95% CI 0.03–0.13) (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4).
- In dialysis-dependent CKD trials, multiple HIF-PHIs were non-inferior to ESAs; for example, ROCKIES (n=2133) mean hemoglobin increase 0.77 vs 0.68 g/dL (roxadustat vs epoetin alfa) and ASCEND-D (n=2964) mean hemoglobin increase 0.28 vs 0.10 g/dL (daprodustat vs ESA) (stoumpos2024hypoxiainduciblefactorprolyl pages 7-8).
These data reflect mature real-world translation of the hypoxia/HIF→EPO axis into clinical implementation at scale (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4, stoumpos2024hypoxiainduciblefactorprolyl pages 7-8).
The most strongly supported functional annotation for mouse Epo (UniProt P07321) is: a secreted, hypoxia-inducible endocrine cytokine produced primarily by renal cortical interstitial REP cells that binds EPOR on erythroid progenitors to activate JAK2-dependent signaling (STAT5 and MAPK/ERK modules) required for survival and terminal differentiation in definitive erythropoiesis (suzuki2024crosstalkbetweenoxygen pages 1-2, lee2001erythropoietin(epo)and pages 4-5, halvorsen2002physiologyoferythropoietin pages 1-2). Mouse genetics (embryonic lethality at ~E13–E13.5 with Epo or Epor loss) provides high-confidence causal evidence that this ligand–receptor pair is essential rather than merely modulatory in vivo (lee2001erythropoietin(epo)and pages 4-5).
A key emerging theme from 2024 work is that “EPO biology” is not only about circulating hormone levels; rather, cell identity and microenvironmental cues (oxygen and iron) shape Epo output, and drug modulation of the HIF/PHD axis can produce compartment-specific patterns (interstitial vs tubular) that may matter for non-erythropoietic outcomes in specific injury models (suzuki2024crosstalkbetweenoxygen pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 1-2).
The following table consolidates the most actionable functional-annotation facts (identity → mechanism → localization → regulation → quantitative data → applications) with citations.
| Aspect | Summary |
|---|---|
| Identity | Target verified as mouse Epo / erythropoietin (UniProt P07321), a secreted precursor hormone/cytokine essential for erythropoiesis; literature and mouse genetic evidence consistently match this identity rather than another ambiguous symbol usage (lee2001erythropoietin(epo)and pages 4-5, halvorsen2002physiologyoferythropoietin pages 1-2). |
| Structure/family | EPO is a glycoprotein cytokine of the hematopoietin/cytokine receptor system; reviews classify EPO among the “long” cytokines with packed antiparallel helices, consistent with the canonical 4-helix bundle family architecture, and EPOR is a homodimeric cytokine receptor with key ligand-contact residues such as EPOR Phe93 (juul2000nonerythropoieticrolesof pages 1-4, bagley2001structuralandfunctional pages 2-4). |
| Secretion/localization | In adult kidney, EPO is produced mainly by renal interstitial fibroblast-like/pericyte-like REP cells in the cortex and secreted into circulation to act on bone marrow erythroid precursors; 2024 work also reports inducible tubular Epo production in proximal and distal tubules under prolonged roxadustat exposure during kidney injury (suzuki2024crosstalkbetweenoxygen pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6). |
| Primary function | Primary annotated function is endocrine stimulation of definitive erythropoiesis: EPO promotes proliferation, survival, maturation, and terminal differentiation of erythroid progenitors and coordinates iron mobilization needed for hemoglobin synthesis (suzuki2024crosstalkbetweenoxygen pages 1-2, lee2001erythropoietin(epo)and pages 4-5, halvorsen2002physiologyoferythropoietin pages 1-2). |
| Receptor/signaling | EPO binds EPOR, stabilizing/activating the receptor dimer and triggering JAK2 activation; canonical downstream signaling includes STAT5, RAS/MEK/ERK (MAPK), and broader EPOR/JAK2-linked phosphosignaling networks involved in erythroid proliferation, survival, cytoskeletal remodeling, and differentiation (juul2000nonerythropoieticrolesof pages 1-4, held2020phosphoproteomicdiscoveryof pages 1-2, halvorsen2002physiologyoferythropoietin pages 1-2, bagley2001structuralandfunctional pages 2-4). |
| Regulation | Epo expression is strongly induced by hypoxia through HIF signaling in renal EPO-producing cells, with HIF-2α identified as the major activator and PHD2 as a dominant upstream oxygen sensor; iron status also modulates this axis (suzuki2024crosstalkbetweenoxygen pages 1-2, stoumpos2024hypoxiainduciblefactorprolyl pages 3-4). |
| Mouse genetic evidence | Mouse Epo and Epor loss-of-function causes defective definitive erythropoiesis, severe anemia, and embryonic lethality around E13–E13.5; primitive yolk-sac erythropoiesis initiates largely without EPO, but later expansion/survival and fetal-liver definitive erythropoiesis require it (juul2000nonerythropoieticrolesof pages 1-4, lee2001erythropoietin(epo)and pages 4-5, juul2000nonerythropoieticrolesof pages 6-8). |
| Quantitative data | Quantitative mouse/related data include EPOR binding affinities of about 201 pM (rescued) vs 270 pM (wild type), with marrow mononuclear-cell EPOR site counts of ~67 (WT), 71 (Tg-B), 27 (Rescued-B), and 83 (Rescued-A); high-EPOR CFU-E responses plateaued at 0.1 U/mL Epo, while low-EPOR rescued cells required 1–10 U/mL; in 2024 kidney work, hypoxia increased interstitial Epo production by ~75-fold, 4 h roxadustat by ~6-fold, and 24–72 h roxadustat increased post-IRI Epo by ~9-fold (suzuki2002erythroidspecificexpressionof pages 8-9, suzuki2002erythroidspecificexpressionof pages 6-8, yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6). |
| Recent developments 2024 | 2024 studies emphasize renewed interest in renal EPO cell plasticity, oxygen/iron crosstalk in REP cells, and compartment-specific Epo induction; notably, prolonged roxadustat was reported to shift Epo production toward renal tubules with renoprotective association, while reviews highlight broader pericyte/HIF biology beyond classic erythropoiesis (suzuki2024crosstalkbetweenoxygen pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 1-2, yasuoka2024tubularendogenouserythropoietin pages 2-6). |
| Applications/clinical | Clinically, endogenous or recombinant EPO biology underpins anemia therapy; 2024 European Renal Best Practice guidance reports >30 phase 3 trials of HIF-prolyl hydroxylase inhibitors, which raise endogenous EPO and improve hemoglobin in CKD anemia. Example: pooled ANDES/OLYMPUS/ALPS (n=4277) showed Hb increase 1.9 vs 0.2 g/dL, response 80% vs 9%, and rescue therapy 9% vs 31% over 52 weeks; in dialysis CKD, multiple HIF-PHIs were non-inferior to ESAs for Hb correction/maintenance (stoumpos2024hypoxiainduciblefactorprolyl pages 3-4, stoumpos2024hypoxiainduciblefactorprolyl pages 7-8). |
Table: This table summarizes the core functional annotation of mouse Epo (UniProt P07321), including identity verification, molecular function, localization, signaling, regulation, mouse genetics, quantitative findings, and 2024 developments. It is useful as a compact evidence-backed reference for the final report.
References
(lee2001erythropoietin(epo)and pages 4-5): Robert Lee, Nathalie Kertesz, Sean B. Joseph, Armin Jegalian, and Hong Wu. Erythropoietin (epo) and epor expression and 2 waves of erythropoiesis. Blood, 98 5:1408-15, Sep 2001. URL: https://doi.org/10.1182/blood.v98.5.1408, doi:10.1182/blood.v98.5.1408. This article has 83 citations and is from a highest quality peer-reviewed journal.
(halvorsen2002physiologyoferythropoietin pages 1-2): S. Halvorsen and AG Bechensteen. Physiology of erythropoietin during mammalian development. Acta Pædiatrica, 91:17-26, Sep 2002. URL: https://doi.org/10.1111/j.1651-2227.2002.tb02901.x, doi:10.1111/j.1651-2227.2002.tb02901.x. This article has 67 citations.
(juul2000nonerythropoieticrolesof pages 1-4): Sandra E. Juul. Nonerythropoietic roles of erythropoietin in the fetus and neonate. Clinics in perinatology, 27 3:527-41, Sep 2000. URL: https://doi.org/10.1016/s0095-5108(05)70037-3, doi:10.1016/s0095-5108(05)70037-3. This article has 103 citations and is from a domain leading peer-reviewed journal.
(bagley2001structuralandfunctional pages 2-4): Christopher J. Bagley, Joanna M. Woodcock, Mark A. Guthridge, Frank C. Stomski, and Angel F. Lopez. Structural and functional hot spots in cytokine receptors. International Journal of Hematology, 73:299-307, Apr 2001. URL: https://doi.org/10.1007/bf02981954, doi:10.1007/bf02981954. This article has 16 citations and is from a peer-reviewed journal.
(suzuki2024crosstalkbetweenoxygen pages 1-2): Norio Suzuki, Yuma Iwamura, Koichiro Kato, Hirotaka Ishioka, Yusuke Konta, Koji Sato, Nao Uchida, Noa Koida, Hiroki Sekine, Tetsuhiro Tanaka, Naonori Kumagai, and Taku Nakai. Crosstalk between oxygen signaling and iron metabolism in renal interstitial fibroblasts. Journal of Clinical Biochemistry and Nutrition, 74:179-184, Feb 2024. URL: https://doi.org/10.3164/jcbn.24-8, doi:10.3164/jcbn.24-8. This article has 7 citations and is from a peer-reviewed journal.
(yasuoka2024tubularendogenouserythropoietin pages 1-2): Yukiko Yasuoka, Yuichiro Izumi, Takashi Fukuyama, Tomomi Oshima, Taiga Yamazaki, Takayuki Uematsu, Noritada Kobayashi, Masayoshi Nanami, Yoshitaka Shimada, Yasushi Nagaba, Masashi Mukoyama, Jeff M Sands, Noriko Takahashi, Katsumasa Kawahara, and Hiroshi Nonoguchi. Tubular endogenous erythropoietin protects renal function against ischemic reperfusion injury. International Journal of Molecular Sciences, Jan 2024. URL: https://doi.org/10.3390/ijms25021223, doi:10.3390/ijms25021223. This article has 6 citations.
(yasuoka2024tubularendogenouserythropoietin pages 2-6): Yukiko Yasuoka, Yuichiro Izumi, Takashi Fukuyama, Tomomi Oshima, Taiga Yamazaki, Takayuki Uematsu, Noritada Kobayashi, Masayoshi Nanami, Yoshitaka Shimada, Yasushi Nagaba, Masashi Mukoyama, Jeff M Sands, Noriko Takahashi, Katsumasa Kawahara, and Hiroshi Nonoguchi. Tubular endogenous erythropoietin protects renal function against ischemic reperfusion injury. International Journal of Molecular Sciences, Jan 2024. URL: https://doi.org/10.3390/ijms25021223, doi:10.3390/ijms25021223. This article has 6 citations.
(held2020phosphoproteomicdiscoveryof pages 1-2): Matthew A. Held, Emily Greenfest-Allen, Edward Jachimowicz, Christian J. Stoeckert, Matthew P. Stokes, Antony W. Wood, and Don M. Wojchowski. Phospho-proteomic discovery of novel signal transducers including thioredoxin-interacting protein as mediators of erythropoietin-dependent human erythropoiesis. Experimental Hematology, 84:29-44, Apr 2020. URL: https://doi.org/10.1016/j.exphem.2020.03.003, doi:10.1016/j.exphem.2020.03.003. This article has 20 citations and is from a peer-reviewed journal.
(suzuki2002erythroidspecificexpressionof pages 6-8): Norio Suzuki, Osamu Ohneda, Satoru Takahashi, Masato Higuchi, Harumi Y. Mukai, Tatsutoshi Nakahata, Shigehiko Imagawa, and Masayuki Yamamoto. Erythroid-specific expression of the erythropoietin receptor rescued its null mutant mice from lethality. Blood, 100 7:2279-88, Oct 2002. URL: https://doi.org/10.1182/blood-2002-01-0124, doi:10.1182/blood-2002-01-0124. This article has 283 citations and is from a highest quality peer-reviewed journal.
(suzuki2002erythroidspecificexpressionof pages 8-9): Norio Suzuki, Osamu Ohneda, Satoru Takahashi, Masato Higuchi, Harumi Y. Mukai, Tatsutoshi Nakahata, Shigehiko Imagawa, and Masayuki Yamamoto. Erythroid-specific expression of the erythropoietin receptor rescued its null mutant mice from lethality. Blood, 100 7:2279-88, Oct 2002. URL: https://doi.org/10.1182/blood-2002-01-0124, doi:10.1182/blood-2002-01-0124. This article has 283 citations and is from a highest quality peer-reviewed journal.
(stoumpos2024hypoxiainduciblefactorprolyl pages 3-4): Sokratis Stoumpos, Kirsty Crowe, Pantelis Sarafidis, Jonathan Barratt, Davide Bolignano, Lucia Del Vecchio, Jolanta Małyszko, Andrzej Więcek, Alberto Ortiz, and Mario Cozzolino. Hypoxia-inducible factor prolyl hydroxylase inhibitors for anaemia in chronic kidney disease: a clinical practice document by the european renal best practice board of the european renal association. Nephrology Dialysis Transplantation, 39:1710-1730, Apr 2024. URL: https://doi.org/10.1093/ndt/gfae075, doi:10.1093/ndt/gfae075. This article has 55 citations and is from a domain leading peer-reviewed journal.
(stoumpos2024hypoxiainduciblefactorprolyl pages 7-8): Sokratis Stoumpos, Kirsty Crowe, Pantelis Sarafidis, Jonathan Barratt, Davide Bolignano, Lucia Del Vecchio, Jolanta Małyszko, Andrzej Więcek, Alberto Ortiz, and Mario Cozzolino. Hypoxia-inducible factor prolyl hydroxylase inhibitors for anaemia in chronic kidney disease: a clinical practice document by the european renal best practice board of the european renal association. Nephrology Dialysis Transplantation, 39:1710-1730, Apr 2024. URL: https://doi.org/10.1093/ndt/gfae075, doi:10.1093/ndt/gfae075. This article has 55 citations and is from a domain leading peer-reviewed journal.
(juul2000nonerythropoieticrolesof pages 6-8): Sandra E. Juul. Nonerythropoietic roles of erythropoietin in the fetus and neonate. Clinics in perinatology, 27 3:527-41, Sep 2000. URL: https://doi.org/10.1016/s0095-5108(05)70037-3, doi:10.1016/s0095-5108(05)70037-3. This article has 103 citations and is from a domain leading peer-reviewed journal.
---
id: P07321
gene_symbol: Epo
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:10090
label: Mus musculus
description: >-
Epo encodes mouse erythropoietin, a secreted glycoprotein cytokine hormone of the EPO/TPO
family. The mature ligand is produced mainly by kidney in adult mammals and liver in fetal
or neonatal contexts, is induced by hypoxia-regulated HIF signaling, and circulates to erythroid
progenitors where it binds EPOR and activates JAK2/STAT and MAPK-linked signaling. The core
supported function is endocrine receptor-ligand control of definitive erythropoiesis: survival,
proliferation, differentiation, maturation, and hemoglobinization of erythroid cells. Many
automated response, neural, immune, cardiac-development, cell-surface, and generic transcription
annotations reflect downstream or non-core contexts and should not obscure the primary EPOR
ligand function.
existing_annotations:
- term:
id: GO:0005128
label: erythropoietin receptor binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo directly functions as the ligand for the erythropoietin receptor.
action: ACCEPT
reason: >-
EPOR binding is the precise molecular function that initiates Epo signaling and erythroid
outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the
initiating event in erythropoietin signaling.
reference_section_type: RESULTS
- term:
id: GO:0005179
label: hormone activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
action: ACCEPT
reason: >-
Hormone activity accurately captures the circulating endocrine role of Epo, though receptor
binding is the more precise MF.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- term:
id: GO:0030218
label: erythrocyte differentiation
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
action: ACCEPT
reason: >-
Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is
central to the gene function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0030295
label: protein kinase activator activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: >-
Epo activates kinase cascades indirectly through EPOR, but protein kinase activator
activity is not the best direct MF term.
action: MODIFY
reason: >-
The ligand directly binds EPOR; kinase activation is a downstream BP consequence of
receptor signaling rather than an independent protein kinase activator molecular activity.
Positive regulation of protein kinase activity remains valid as pathway context, but
it is a BP term and should not be proposed as a replacement for this MF annotation.
proposed_replacement_terms:
- id: GO:0005128
label: erythropoietin receptor binding
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0038162
label: erythropoietin-mediated signaling pathway
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
action: ACCEPT
reason: >-
This is the pathway named for the ligand and is the correct BP context for downstream
JAK2/STAT, PI3K, RAS, and ERK events.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0097696
label: cell surface receptor signaling pathway via STAT
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream
of JAK2.
action: ACCEPT
reason: >-
STAT signaling is a canonical immediate branch of Epo receptor activation and is part
of the core pathway.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
action: ACCEPT
reason: >-
Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival
evidence.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: proliferation and survival of erythroid cells in response to Epo
reference_section_type: ABSTRACT
- term:
id: GO:0005615
label: extracellular space
evidence_type: IBA
original_reference_id: GO_REF:0000033
review:
summary: Epo is secreted and acts in the extracellular space.
action: ACCEPT
reason: Extracellular space is the appropriate core location for the circulating ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005128
label: erythropoietin receptor binding
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Epo directly functions as the ligand for the erythropoietin receptor.
action: ACCEPT
reason: >-
EPOR binding is the precise molecular function that initiates Epo signaling and erythroid
outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the
initiating event in erythropoietin signaling.
reference_section_type: RESULTS
- term:
id: GO:0005179
label: hormone activity
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
action: ACCEPT
reason: >-
Hormone activity accurately captures the circulating endocrine role of Epo, though receptor
binding is the more precise MF.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0006950
label: response to stress
evidence_type: IEA
original_reference_id: GO_REF:0000117
review:
summary: Response to stress is too broad for the supported Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The stress connection is better captured by hypoxia-regulated Epo production and erythropoietic
response rather than a generic response-to-stress annotation.
supported_by:
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: PMID:17981124
supporting_text: embryos show severe fetal anemia stemming from deficient erythropoietin
(Epo)
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing
interstitial cells.
reference_section_type: RESULTS
- term:
id: GO:0043249
label: erythrocyte maturation
evidence_type: IEA
original_reference_id: GO_REF:0000043
review:
summary: Epo promotes erythrocyte maturation as part of its erythropoietic hormone function.
action: ACCEPT
reason: >-
Maturation is consistent with UniProt keyword evidence and the Falcon synthesis of Epo
as the principal erythroid growth and maturation factor.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
Generic RNA polymerase II transcription regulation is downstream of receptor signaling
and too broad for Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation
is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0005125
label: cytokine activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
action: ACCEPT
reason: >-
Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival
evidence.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: proliferation and survival of erythroid cells in response to Epo
reference_section_type: ABSTRACT
- term:
id: GO:0005128
label: erythropoietin receptor binding
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo directly functions as the ligand for the erythropoietin receptor.
action: ACCEPT
reason: >-
EPOR binding is the precise molecular function that initiates Epo signaling and erythroid
outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the
initiating event in erythropoietin signaling.
reference_section_type: RESULTS
- term:
id: GO:0005179
label: hormone activity
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo is a secreted endocrine hormone regulating erythrocyte mass.
action: ACCEPT
reason: >-
Hormone activity accurately captures the circulating endocrine role of Epo, though receptor
binding is the more precise MF.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- term:
id: GO:0005615
label: extracellular space
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo is secreted and acts in the extracellular space.
action: ACCEPT
reason: Extracellular space is the appropriate core location for the circulating ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
Epo promotes proliferation of erythroid progenitors, but the term is broader than the
core ligand function.
action: KEEP_AS_NON_CORE
reason: >-
The annotation is directionally correct as an erythroid outcome but should be interpreted
in the erythropoietic context, not as generic proliferation across cell types.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0009986
label: cell surface
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Cell surface localization is not supported for Epo as a secreted ligand.
action: REMOVE
reason: >-
Epo acts on cell-surface EPOR after secretion, but the Epo protein itself is not a membrane
or cell-surface resident protein in UniProt or Falcon.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0010523
label: negative regulation of calcium ion transport into cytosol
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
negative regulation of calcium ion transport into cytosol is an osmotic/calcium-stress
transfer that is not part of the core mouse Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0030218
label: erythrocyte differentiation
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
action: ACCEPT
reason: >-
Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is
central to the gene function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0038162
label: erythropoietin-mediated signaling pathway
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
action: ACCEPT
reason: >-
This is the pathway named for the ligand and is the correct BP context for downstream
JAK2/STAT, PI3K, RAS, and ERK events.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
Generic RNA polymerase II transcription regulation is downstream of receptor signaling
and too broad for Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation
is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0046579
label: positive regulation of Ras protein signal transduction
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: RAS activation is a recognized downstream branch of Epo signaling.
action: KEEP_AS_NON_CORE
reason: >-
This captures a downstream pathway module, whereas the core function remains EPOR ligand
activity and erythropoietin-mediated signaling.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9029152
supporting_text: Reactome models Epo:Epor:JAK2-linked complexes mediating GDP-GTP exchange
on Ras.
reference_section_type: RESULTS
- term:
id: GO:0071474
label: cellular hyperosmotic response
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
cellular hyperosmotic response is an osmotic/calcium-stress transfer that is not part
of the core mouse Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0097696
label: cell surface receptor signaling pathway via STAT
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream
of JAK2.
action: ACCEPT
reason: >-
STAT signaling is a canonical immediate branch of Epo receptor activation and is part
of the core pathway.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:1902219
label: >-
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic
stress
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic
stress is an osmotic/calcium-stress transfer that is not part of the core mouse Epo
function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: Epo prevents apoptosis of erythroid cells during erythropoiesis.
action: ACCEPT
reason: Erythroid survival is a core biological effect of Epo/EPOR signaling.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0000122
label: negative regulation of transcription by RNA polymerase II
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Generic RNA polymerase II transcription regulation is downstream of receptor signaling
and too broad for Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation
is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0001666
label: response to hypoxia
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo expression and systemic Epo response are hypoxia-regulated.
action: KEEP_AS_NON_CORE
reason: >-
Hypoxia is a major upstream regulator and physiological context for Epo production,
but the gene product function is the secreted hormone signal.
supported_by:
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: PMID:17981124
supporting_text: embryos show severe fetal anemia stemming from deficient erythropoietin
(Epo)
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing
interstitial cells.
reference_section_type: RESULTS
- term:
id: GO:0005125
label: cytokine activity
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo is a hematopoietic cytokine ligand acting through EPOR.
action: ACCEPT
reason: >-
Cytokine activity is supported by UniProt, Falcon, and Epo-dependent erythroid survival
evidence.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: proliferation and survival of erythroid cells in response to Epo
reference_section_type: ABSTRACT
- term:
id: GO:0005615
label: extracellular space
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: Epo is secreted and acts in the extracellular space.
action: ACCEPT
reason: Extracellular space is the appropriate core location for the circulating ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0006953
label: acute-phase response
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
acute-phase response is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0007584
label: response to nutrient
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to nutrient is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000120
review:
summary: >-
Epo promotes proliferation of erythroid progenitors, but the term is broader than the
core ligand function.
action: KEEP_AS_NON_CORE
reason: >-
The annotation is directionally correct as an erythroid outcome but should be interpreted
in the erythropoietic context, not as generic proliferation across cell types.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0009651
label: response to salt stress
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to salt stress is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0009986
label: cell surface
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Cell surface localization is not supported for Epo as a secreted ligand.
action: REMOVE
reason: >-
Epo acts on cell-surface EPOR after secretion, but the Epo protein itself is not a membrane
or cell-surface resident protein in UniProt or Falcon.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0010523
label: negative regulation of calcium ion transport into cytosol
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
negative regulation of calcium ion transport into cytosol is an osmotic/calcium-stress
transfer that is not part of the core mouse Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0010976
label: positive regulation of neuron projection development
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
positive regulation of neuron projection development reflects non-erythroid neurotrophic
contexts rather than the conserved core Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation
is automated/orthology-derived and not supported as a primary mouse Epo function here.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0030218
label: erythrocyte differentiation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
action: ACCEPT
reason: >-
Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is
central to the gene function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0032496
label: response to lipopolysaccharide
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to lipopolysaccharide is a broad stimulus-response annotation transferred from
automated evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0033189
label: response to vitamin A
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to vitamin A is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0033574
label: response to testosterone
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to testosterone is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0038162
label: erythropoietin-mediated signaling pathway
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
action: ACCEPT
reason: >-
This is the pathway named for the ligand and is the correct BP context for downstream
JAK2/STAT, PI3K, RAS, and ERK events.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0042104
label: positive regulation of activated T cell proliferation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Activated T cell proliferation is not supported as a core mouse Epo function in the
reviewed evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This transferred immune term is outside the canonical EPOR ligand role in erythropoiesis
and lacks direct support in UniProt/Falcon/local publications.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0043627
label: response to estrogen
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to estrogen is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0044297
label: cell body
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Cell body localization is not a supported core location for mouse Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The core location is extracellular/secreted; cell body appears to be transferred from
non-canonical contexts and should not be treated as a general Epo localization.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0045666
label: positive regulation of neuron differentiation
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
positive regulation of neuron differentiation reflects non-erythroid neurotrophic contexts
rather than the conserved core Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation
is automated/orthology-derived and not supported as a primary mouse Epo function here.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0045893
label: positive regulation of DNA-templated transcription
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
Generic RNA polymerase II transcription regulation is downstream of receptor signaling
and too broad for Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Epo can induce transcriptional programs through EPOR/JAK/STAT, but the appropriate annotation
is erythropoietin-mediated signaling or specific downstream erythroid outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0046579
label: positive regulation of Ras protein signal transduction
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: RAS activation is a recognized downstream branch of Epo signaling.
action: KEEP_AS_NON_CORE
reason: >-
This captures a downstream pathway module, whereas the core function remains EPOR ligand
activity and erythropoietin-mediated signaling.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9029152
supporting_text: Reactome models Epo:Epor:JAK2-linked complexes mediating GDP-GTP exchange
on Ras.
reference_section_type: RESULTS
- term:
id: GO:0048678
label: response to axon injury
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to axon injury is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0051602
label: response to electrical stimulus
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to electrical stimulus is a broad stimulus-response annotation transferred
from automated evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0055093
label: response to hyperoxia
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to hyperoxia is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0070374
label: positive regulation of ERK1 and ERK2 cascade
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
ERK1/2 activation can occur downstream of Epo signaling but is not the primary annotation
level for Epo.
action: KEEP_AS_NON_CORE
reason: >-
MAPK/ERK is a downstream branch of Epo/EPOR signaling, best retained as non-core rather
than as the defining function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0070555
label: response to interleukin-1
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to interleukin-1 is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0071474
label: cellular hyperosmotic response
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
cellular hyperosmotic response is an osmotic/calcium-stress transfer that is not part
of the core mouse Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0071548
label: response to dexamethasone
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
response to dexamethasone is a broad stimulus-response annotation transferred from automated
evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The review evidence supports hypoxia-regulated Epo production and erythropoietic signaling,
not this broad stimulus-response term as an Epo function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0097696
label: cell surface receptor signaling pathway via STAT
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo/EPOR signaling activates STAT-family transcriptional signaling downstream
of JAK2.
action: ACCEPT
reason: >-
STAT signaling is a canonical immediate branch of Epo receptor activation and is part
of the core pathway.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:1902219
label: >-
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic
stress
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: >-
negative regulation of intrinsic apoptotic signaling pathway in response to osmotic
stress is an osmotic/calcium-stress transfer that is not part of the core mouse Epo
function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
These annotations likely derive from context-specific non-erythroid or cellular-stress
experiments in other species; they are not supported by the mouse UniProt/Falcon synthesis
as primary Epo biology.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
evidence_type: IEA
original_reference_id: GO_REF:0000107
review:
summary: Epo prevents apoptosis of erythroid cells during erythropoiesis.
action: ACCEPT
reason: Erythroid survival is a core biological effect of Epo/EPOR signaling.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0005615
label: extracellular space
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: Epo is secreted and acts in the extracellular space.
action: ACCEPT
reason: Extracellular space is the appropriate core location for the circulating ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0008284
label: positive regulation of cell population proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: >-
Epo promotes proliferation of erythroid progenitors, but the term is broader than the
core ligand function.
action: KEEP_AS_NON_CORE
reason: >-
The annotation is directionally correct as an erythroid outcome but should be interpreted
in the erythropoietic context, not as generic proliferation across cell types.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0010976
label: positive regulation of neuron projection development
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: >-
positive regulation of neuron projection development reflects non-erythroid neurotrophic
contexts rather than the conserved core Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation
is automated/orthology-derived and not supported as a primary mouse Epo function here.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0042104
label: positive regulation of activated T cell proliferation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: >-
Activated T cell proliferation is not supported as a core mouse Epo function in the
reviewed evidence.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This transferred immune term is outside the canonical EPOR ligand role in erythropoiesis
and lacks direct support in UniProt/Falcon/local publications.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0044297
label: cell body
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: Cell body localization is not a supported core location for mouse Epo.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The core location is extracellular/secreted; cell body appears to be transferred from
non-canonical contexts and should not be treated as a general Epo localization.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0045666
label: positive regulation of neuron differentiation
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: >-
positive regulation of neuron differentiation reflects non-erythroid neurotrophic contexts
rather than the conserved core Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
Falcon notes non-erythropoietic roles can occur in specific contexts, but the annotation
is automated/orthology-derived and not supported as a primary mouse Epo function here.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0070374
label: positive regulation of ERK1 and ERK2 cascade
evidence_type: ISO
original_reference_id: GO_REF:0000096
review:
summary: >-
ERK1/2 activation can occur downstream of Epo signaling but is not the primary annotation
level for Epo.
action: KEEP_AS_NON_CORE
reason: >-
MAPK/ERK is a downstream branch of Epo/EPOR signaling, best retained as non-core rather
than as the defining function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: ISO
original_reference_id: GO_REF:0000119
review:
summary: >-
Proteasome-mediated ubiquitin-dependent protein catabolism is not a supported Epo function.
action: MARK_AS_OVER_ANNOTATED
reason: >-
This appears to be an indirect transferred pathway context, not a process performed
or directly controlled by the secreted Epo ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
The UniProt function statement centers Epo on EPOR binding, JAK2 activation, erythrocyte
proliferation and differentiation, and secreted localization.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies the best-supported function as secreted endocrine EPOR ligand activity
in definitive erythropoiesis, while non-erythroid response and development terms are
context-specific or less directly supported.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9006326
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9006327
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9006329
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9012652
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9012653
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9012656
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9027266
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9027268
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9027429
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9027436
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9029146
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9029147
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9029152
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9029162
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9030346
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9030353
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005576
label: extracellular region
evidence_type: TAS
original_reference_id: Reactome:R-MMU-9032476
review:
summary: Epo is an extracellular secreted ligand.
action: ACCEPT
reason: >-
Extracellular region is correct, although extracellular space is the more specific location
used for the core function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
- term:
id: GO:0005128
label: erythropoietin receptor binding
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: Epo directly functions as the ligand for the erythropoietin receptor.
action: ACCEPT
reason: >-
EPOR binding is the precise molecular function that initiates Epo signaling and erythroid
outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the
initiating event in erythropoietin signaling.
reference_section_type: RESULTS
- term:
id: GO:0038162
label: erythropoietin-mediated signaling pathway
evidence_type: ISS
original_reference_id: GO_REF:0000024
review:
summary: Epo initiates the erythropoietin-mediated signaling pathway by binding EPOR.
action: ACCEPT
reason: >-
This is the pathway named for the ligand and is the correct BP context for downstream
JAK2/STAT, PI3K, RAS, and ERK events.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0033033
label: negative regulation of myeloid cell apoptotic process
evidence_type: IDA
original_reference_id: PMID:17981124
review:
summary: >-
The SENP1/HIF paper supports deficient Epo production causing fetal anemia, not broad
myeloid apoptosis as a direct Epo annotation.
action: MODIFY
reason: >-
The defensible Epo terms are erythroid differentiation and negative regulation of erythrocyte
apoptosis, not broad myeloid apoptosis.
proposed_replacement_terms:
- id: GO:0030218
label: erythrocyte differentiation
- id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
supported_by:
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: PMID:17981124
supporting_text: embryos show severe fetal anemia stemming from deficient erythropoietin
(Epo)
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing
interstitial cells.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0018105
label: peptidyl-serine phosphorylation
evidence_type: IDA
original_reference_id: PMID:21095239
review:
summary: >-
Epo does not catalyze peptidyl-serine phosphorylation; it stimulates kinases that phosphorylate
substrates such as Bad.
action: MODIFY
reason: >-
PMID:21095239 attributes Bad phosphorylation to Epo-activated JNK1, not to Epo as an
enzyme. The correct curation is positive regulation of kinase activity and erythroid
cell survival.
proposed_replacement_terms:
- id: GO:0045860
label: positive regulation of protein kinase activity
- id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
supported_by:
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: Binds to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- term:
id: GO:0030295
label: protein kinase activator activity
evidence_type: IDA
original_reference_id: PMID:21095239
review:
summary: >-
Epo activates kinase cascades indirectly through EPOR, but protein kinase activator
activity is not the best direct MF term.
action: MODIFY
reason: >-
The ligand directly binds EPOR; kinase activation is a downstream BP consequence of
receptor signaling rather than an independent protein kinase activator molecular activity.
Positive regulation of protein kinase activity remains valid as pathway context, but
it is a BP term and should not be proposed as a replacement for this MF annotation.
proposed_replacement_terms:
- id: GO:0005128
label: erythropoietin receptor binding
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0043066
label: negative regulation of apoptotic process
evidence_type: IDA
original_reference_id: PMID:21095239
review:
summary: >-
Epo has anti-apoptotic effects, but the broad apoptotic-process term should be narrowed
to erythroid survival where supported.
action: MODIFY
reason: >-
The strongest supported context is negative regulation of apoptosis in Epo-dependent
erythroid cells, already represented by the more specific erythrocyte apoptotic-process
term.
proposed_replacement_terms:
- id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0045860
label: positive regulation of protein kinase activity
evidence_type: IDA
original_reference_id: PMID:21095239
review:
summary: Epo signaling positively regulates downstream kinase activity after EPOR engagement.
action: ACCEPT
reason: JAK2, JNK1, and MAPK-family activation are supported downstream of Epo/EPOR signaling.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- term:
id: GO:0005128
label: erythropoietin receptor binding
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: Epo directly functions as the ligand for the erythropoietin receptor.
action: ACCEPT
reason: >-
EPOR binding is the precise molecular function that initiates Epo signaling and erythroid
outcomes.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the
initiating event in erythropoietin signaling.
reference_section_type: RESULTS
- term:
id: GO:0001525
label: angiogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
Angiogenic effects of Epo are plausible but secondary and not the defining mouse Epo
function.
action: KEEP_AS_NON_CORE
reason: >-
The cached source is review-level and Falcon treats non-erythroid tissue effects as
context-dependent; retain only as non-core pending stronger direct mouse evidence.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0003007
label: heart morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
heart morphogenesis is too specific and developmental for the evidence available in
this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence
for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis
as the supported core function.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0055008
label: cardiac muscle tissue morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
cardiac muscle tissue morphogenesis is too specific and developmental for the evidence
available in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence
for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis
as the supported core function.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0055010
label: ventricular cardiac muscle tissue morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
ventricular cardiac muscle tissue morphogenesis is too specific and developmental for
the evidence available in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence
for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis
as the supported core function.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0060979
label: vasculogenesis involved in coronary vascular morphogenesis
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
vasculogenesis involved in coronary vascular morphogenesis is too specific and developmental
for the evidence available in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence
for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis
as the supported core function.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0061032
label: visceral serous pericardium development
evidence_type: TAS
original_reference_id: PMID:20299672
review:
summary: >-
visceral serous pericardium development is too specific and developmental for the evidence
available in this review.
action: MARK_AS_OVER_ANNOTATED
reason: >-
The locally cached PMID:20299672 abstract does not provide direct Epo-specific evidence
for these heart/coronary/pericardial morphogenesis terms, and Falcon identifies erythropoiesis
as the supported core function.
supported_by:
- reference_id: PMID:20299672
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon treats non-erythropoietic tissue outcomes as context-dependent and secondary
to the core endocrine erythropoiesis function.
reference_section_type: RESULTS
- term:
id: GO:0006357
label: regulation of transcription by RNA polymerase II
evidence_type: IDA
original_reference_id: PMID:17300687
review:
summary: >-
Epo signaling can regulate hemoglobin-related gene expression in decidual cells, but
this broad transcription term overstates the direct function.
action: MODIFY
reason: >-
The PMID:17300687 evidence is better represented as Epo-dependent hemoglobin biosynthesis
and decidual survival, downstream of receptor signaling.
proposed_replacement_terms:
- id: GO:0042541
label: hemoglobin biosynthetic process
- id: GO:0007566
label: embryo implantation
supported_by:
- reference_id: PMID:17300687
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation
as a downstream biological outcome of EPOR signaling.
reference_section_type: RESULTS
- term:
id: GO:0006915
label: apoptotic process
evidence_type: IDA
original_reference_id: PMID:17300687
review:
summary: >-
The decidual evidence concerns apoptosis after Epo signaling blockade, so the direction
should be anti-apoptotic rather than generic apoptotic process.
action: MODIFY
reason: >-
Epo signaling supports survival; use negative regulation of apoptotic process instead
of the broad apoptotic process term.
proposed_replacement_terms:
- id: GO:0043066
label: negative regulation of apoptotic process
supported_by:
- reference_id: PMID:17300687
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation
as a downstream biological outcome of EPOR signaling.
reference_section_type: RESULTS
- term:
id: GO:0007566
label: embryo implantation
evidence_type: IDA
original_reference_id: PMID:17300687
review:
summary: >-
Epo contributes to mouse implantation through decidual-cell hemoglobin synthesis and
survival.
action: KEEP_AS_NON_CORE
reason: >-
The PMID:17300687 evidence supports this developmental context, but it is not the core
conserved function of Epo.
supported_by:
- reference_id: PMID:17300687
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation
as a downstream biological outcome of EPOR signaling.
reference_section_type: RESULTS
- term:
id: GO:0042541
label: hemoglobin biosynthetic process
evidence_type: IDA
original_reference_id: PMID:17300687
review:
summary: Epo signaling promotes hemoglobin synthesis in erythroid and decidual contexts.
action: KEEP_AS_NON_CORE
reason: >-
Hemoglobin synthesis is a downstream outcome of Epo signaling, not a molecular function
of Epo itself.
supported_by:
- reference_id: PMID:17300687
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation
as a downstream biological outcome of EPOR signaling.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0030218
label: erythrocyte differentiation
evidence_type: IDA
original_reference_id: PMID:15591122
review:
summary: Epo supports erythrocyte differentiation, especially definitive/stress erythropoiesis.
action: ACCEPT
reason: >-
Erythroid differentiation is a direct biological outcome of Epo/EPOR signaling and is
central to the gene function.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- term:
id: GO:0001666
label: response to hypoxia
evidence_type: IDA
original_reference_id: PMID:15016652
review:
summary: Epo expression and systemic Epo response are hypoxia-regulated.
action: KEEP_AS_NON_CORE
reason: >-
Hypoxia is a major upstream regulator and physiological context for Epo production,
but the gene product function is the secreted hormone signal.
supported_by:
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: PMID:17981124
supporting_text: embryos show severe fetal anemia stemming from deficient erythropoietin
(Epo)
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon emphasizes renal Epo induction by hypoxia through HIF signaling and renal EPO-producing
interstitial cells.
reference_section_type: RESULTS
- term:
id: GO:0005615
label: extracellular space
evidence_type: IDA
original_reference_id: PMID:15016652
review:
summary: Epo is secreted and acts in the extracellular space.
action: ACCEPT
reason: Extracellular space is the appropriate core location for the circulating ligand.
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: 'SUBCELLULAR LOCATION: Secreted.'
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
TISSUE SPECIFICITY: Produced by kidney or liver of adult mammals and by liver of fetal
or neonatal mammals.
reference_section_type: RESULTS
- reference_id: PMID:15016652
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon describes Epo as secreted into circulation from renal interstitial EPO-producing
cells to act on marrow erythroid precursors.
reference_section_type: RESULTS
references:
- id: GO_REF:0000024
title: >-
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator
judgment of sequence similarity
findings:
- statement: >-
Manual orthology transfer supports receptor binding and Epo-mediated signaling from
experimentally characterized erythropoietin orthologs.
supporting_text: >-
GOA ISS rows transfer erythropoietin receptor binding and erythropoietin-mediated signaling
from human EPO.
reference_section_type: RESULTS
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings:
- statement: >-
IBA annotations correctly recover conserved Epo receptor-ligand function and erythroid
signaling, but protein kinase activator activity is better represented as downstream
kinase regulation.
supporting_text: >-
GOA IBA rows include EPOR binding, hormone activity, cytokine activity, erythrocyte
differentiation, Epo-mediated signaling, STAT signaling, and protein kinase activator
activity.
reference_section_type: RESULTS
- id: GO_REF:0000043
title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
findings:
- statement: UniProt keyword mapping supports erythrocyte maturation as an Epo outcome.
supporting_text: GOA maps the UniProt erythrocyte maturation keyword to GO:0043249 for
Epo.
reference_section_type: RESULTS
- id: GO_REF:0000096
title: >-
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
findings:
- statement: >-
Mouse-rat transfer includes plausible downstream proliferation and ERK/neural terms,
but these are non-core or over-extended relative to mouse Epo erythropoiesis.
supporting_text: >-
GOA ISO rows from rat include extracellular space, proliferation, neuron projection
development, T cell proliferation, cell body, neuron differentiation, and ERK cascade
terms.
reference_section_type: RESULTS
- id: GO_REF:0000107
title: >-
Automatic transfer of experimentally verified manual GO annotation data to orthologs using
Ensembl Compara
findings:
- statement: >-
Ensembl Compara transfer contributes many broad response and neural/immune annotations
that should not be treated as core mouse Epo biology.
supporting_text: >-
GOA IEA rows include response to nutrient, salt stress, lipopolysaccharide, vitamin
A, testosterone, estrogen, axon injury, electrical stimulus, hyperoxia, interleukin-1,
and dexamethasone.
reference_section_type: RESULTS
- id: GO_REF:0000117
title: Electronic Gene Ontology annotations created by ARBA machine learning models
findings:
- statement: >-
ARBA assigns a generic response-to-stress annotation that is less informative than hypoxia-regulated
Epo production and erythropoietic signaling.
supporting_text: GOA includes an ARBA response to stress annotation for Epo.
reference_section_type: RESULTS
- id: GO_REF:0000119
title: >-
Automated transfer of experimentally-verified manual GO annotation data to mouse-human
orthologs
findings:
- statement: >-
Mouse-human transfer captures conserved receptor binding, cytokine/hormone activity,
secreted localization, erythropoiesis, Epo signaling, STAT signaling, and erythroid
anti-apoptosis, but also transfers broad transcription, cell surface, osmotic, Ras,
and proteasome terms requiring restraint.
supporting_text: >-
GOA ISO rows from human EPO include both canonical Epo signaling terms and many broad
downstream response annotations.
reference_section_type: RESULTS
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings:
- statement: >-
Combined IEA methods support receptor binding, hormone activity, extracellular localization,
and proliferation as broad Epo outcomes.
supporting_text: >-
GOA IEA rows include erythropoietin receptor binding, hormone activity, extracellular
region/space, and positive regulation of cell population proliferation.
reference_section_type: RESULTS
- id: file:mouse/Epo/Epo-uniprot.txt
title: UniProtKB record for mouse Epo (P07321)
findings:
- statement: >-
UniProt describes Epo as a hormone that binds EPOR, activates JAK2, and regulates erythrocyte
proliferation/differentiation and circulating erythrocyte mass.
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- statement: UniProt localizes mouse Epo as secreted and notes kidney/liver production contexts.
supporting_text: >-
SUBCELLULAR LOCATION: Secreted. TISSUE SPECIFICITY: Produced by kidney or liver of adult
mammals and by liver of fetal or neonatal mammals.
reference_section_type: RESULTS
- id: file:mouse/Epo/Epo-deep-research-falcon.md
title: Falcon deep research report for mouse Epo
findings:
- statement: >-
Falcon verifies the target as mouse erythropoietin P07321 and identifies the core function
as a secreted endocrine cytokine required for definitive erythropoiesis.
supporting_text: >-
The most strongly supported functional annotation for mouse Epo (UniProt P07321) is
a secreted, hypoxia-inducible endocrine cytokine produced primarily by renal cortical
interstitial REP cells that binds EPOR on erythroid progenitors to activate JAK2-dependent
signaling required for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- statement: >-
Falcon summarizes mouse genetic evidence that Epo/Epor loss causes severe anemia and
embryonic lethality around E13-E13.5 due to impaired definitive erythropoiesis.
supporting_text: >-
Mouse Epo and EpoR loss-of-function causes defective definitive erythropoiesis, severe
anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- statement: >-
Falcon highlights hypoxia/HIF regulation of renal Epo production and context-dependent
non-erythropoietic tissue effects as secondary to the core erythropoietic function.
supporting_text: >-
A central regulatory principle is that Epo expression is strongly induced by hypoxia
through the HIF system in renal EPO-producing cells.
reference_section_type: RESULTS
- id: PMID:15016652
title: Superoxide dismutase-3 promotes full expression of the EPO response to hypoxia.
full_text_unavailable: true
findings:
- statement: >-
Mouse renal EPO mRNA induction by hypoxia is attenuated in SOD3 knockout mice, supporting
hypoxia-regulated Epo production.
supporting_text: hypoxic activation of HIF-1 alpha and its target gene EPO in mouse
reference_section_type: ABSTRACT
- id: PMID:15591122
title: BMP4 and Madh5 regulate the erythroid response to acute anemia.
full_text_unavailable: true
findings:
- statement: >-
Acute anemia/hypoxia mobilizes and differentiates erythroid progenitors in mouse spleen,
supporting the stress erythropoiesis context for Epo action.
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- id: PMID:17300687
title: >-
Erythropoietin contributes to implantation: ectopic hemoglobin synthesis in decidual cells
of mice.
full_text_unavailable: true
findings:
- statement: >-
Epo signaling in mouse decidua supports implantation through hemoglobin synthesis and
decidual-cell survival.
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- id: PMID:17981124
title: SUMO-specific protease 1 is essential for stabilization of HIF1alpha during hypoxia.
findings:
- statement: >-
SENP1 regulates hypoxia-induced Epo production through HIF1alpha stability; defective
Epo production causes severe fetal anemia.
supporting_text: embryos show severe fetal anemia stemming from deficient erythropoietin
(Epo)
reference_section_type: ABSTRACT
- id: PMID:20299672
title: Epicardial-myocardial signaling directing coronary vasculogenesis.
full_text_unavailable: true
findings:
- statement: >-
The cached abstract supports a broad role for secreted growth factors in coronary development
but does not itself provide direct Epo-specific evidence for the narrow cardiac GO terms.
supporting_text: mediated in part by secreted growth factors
reference_section_type: ABSTRACT
- id: PMID:21095239
title: >-
Phosphorylation of Bcl-associated death protein (Bad) by erythropoietin-activated c-Jun
N-terminal protein kinase 1 contributes to survival of erythropoietin-dependent cells.
findings:
- statement: >-
Epo supports survival of immature erythroid cells and Epo-dependent murine cells through
JNK1-dependent Bad phosphorylation.
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- statement: >-
The phosphorylation event is performed by JNK1, so Epo should be annotated as regulating
kinase activity and erythroid survival rather than catalyzing phosphorylation.
supporting_text: proliferation and survival of erythroid cells in response to Epo
reference_section_type: ABSTRACT
- id: Reactome:R-MMU-9006326
title: Epo binds Epor:Jak2:Lyn:Irs2
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo binds Epor:Jak2:Lyn:Irs2
reference_section_type: RESULTS
- id: Reactome:R-MMU-9006327
title: Phospho-Jak2 phosphorylates Epor
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Phospho-Jak2 phosphorylates Epor
reference_section_type: RESULTS
- id: Reactome:R-MMU-9006329
title: Jak2 transphosphorylates and is activated in response to Erythropoietin
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Jak2 transphosphorylates and is activated in response to Erythropoietin
reference_section_type: RESULTS
- id: Reactome:R-MMU-9012652
title: p-Stat5 dissociates from Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: p-Stat5 dissociates from Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2
reference_section_type: RESULTS
- id: Reactome:R-MMU-9012653
title: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 phosphorylates Stat5
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 phosphorylates Stat5
reference_section_type: RESULTS
- id: Reactome:R-MMU-9012656
title: phospho-Epor:phospho-Jak2:Lyn:Irs2 binds Stat5
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: phospho-Epor:phospho-Jak2:Lyn:Irs2 binds Stat5
reference_section_type: RESULTS
- id: Reactome:R-MMU-9027266
title: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2:p-Crkl:Rapgef1 binds Shc1
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2:p-Crkl:Rapgef1 binds Shc1
reference_section_type: RESULTS
- id: Reactome:R-MMU-9027268
title: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 binds Pi3k
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 binds Pi3k
reference_section_type: RESULTS
- id: Reactome:R-MMU-9027429
title: Lyn phosphorylates Plcg1,2 in Epo receptor complex
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Lyn phosphorylates Plcg1,2 in Epo receptor complex
reference_section_type: RESULTS
- id: Reactome:R-MMU-9027436
title: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 binds Plcg1,2
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo:p-8Y-Epor:p-12Y-Jak2:Lyn:Irs2 binds Plcg1,2
reference_section_type: RESULTS
- id: Reactome:R-MMU-9029146
title: Epo receptor complex binds Grb2:Sos1
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo receptor complex binds Grb2:Sos1
reference_section_type: RESULTS
- id: Reactome:R-MMU-9029147
title: Jak2 phosphorylates Shc1 in Epo receptor complex
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Jak2 phosphorylates Shc1 in Epo receptor complex
reference_section_type: RESULTS
- id: Reactome:R-MMU-9029152
title: Epo receptor complex mediates exchange of GDP for GTP bound to Ras
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo receptor complex mediates exchange of GDP for GTP bound to Ras
reference_section_type: RESULTS
- id: Reactome:R-MMU-9029162
title: Jak2 phosphorylates Vav1 in Epo receptor complex
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Jak2 phosphorylates Vav1 in Epo receptor complex
reference_section_type: RESULTS
- id: Reactome:R-MMU-9030346
title: Epo receptor complex binds Crkl:Rapgef1
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epo receptor complex binds Crkl:Rapgef1
reference_section_type: RESULTS
- id: Reactome:R-MMU-9030353
title: Lyn phosphorylates Crkl in Epo receptor complex
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Lyn phosphorylates Crkl in Epo receptor complex
reference_section_type: RESULTS
- id: Reactome:R-MMU-9032476
title: Epor-associated Plcg hydrolyzes phosphatidylinositol bisphosphate
findings:
- statement: >-
Reactome places secreted Epo in extracellular receptor-signaling complexes that activate
EPOR/JAK2-linked pathways.
supporting_text: Epor-associated Plcg hydrolyzes phosphatidylinositol bisphosphate
reference_section_type: RESULTS
core_functions:
- description: >-
Secreted endocrine cytokine/hormone ligand that binds erythropoietin receptor (EPOR) on
erythroid progenitors, initiating EPOR dimerization and JAK2-dependent signaling. This
receptor-ligand function is the specific core molecular activity of Epo and is responsible
for downstream STAT, RAS/MAPK, and survival signaling.
molecular_function:
id: GO:0005128
label: erythropoietin receptor binding
directly_involved_in:
- id: GO:0038162
label: erythropoietin-mediated signaling pathway
- id: GO:0097696
label: cell surface receptor signaling pathway via STAT
locations:
- id: GO:0005615
label: extracellular space
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: Reactome:R-MMU-9006326
supporting_text: >-
Reactome models mouse Epo binding the Epor:JAK2-containing receptor complex as the initiating
event in erythropoietin signaling.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon summarizes canonical EPO/EPOR downstream modules as JAK2/STAT5 and RAS/MEK/ERK
signaling that coordinate erythroid survival, proliferation, and differentiation.
reference_section_type: RESULTS
- description: >-
Physiological erythropoietic hormone function: Epo promotes definitive and stress erythropoiesis
by supporting erythroid progenitor survival, proliferation, differentiation, maturation,
and hemoglobin accumulation. This is the core biological outcome of the EPOR ligand activity,
whereas broader transcription, stress, neural, immune, cardiac, and osmotic annotations
are secondary or over-extended.
molecular_function:
id: GO:0005179
label: hormone activity
directly_involved_in:
- id: GO:0030218
label: erythrocyte differentiation
- id: GO:0043249
label: erythrocyte maturation
- id: GO:1902251
label: negative regulation of erythrocyte apoptotic process
locations:
- id: GO:0005615
label: extracellular space
supported_by:
- reference_id: file:mouse/Epo/Epo-uniprot.txt
supporting_text: >-
FUNCTION: Hormone involved in the regulation of erythrocyte proliferation and differentiation
and the maintenance of a physiological level of circulating erythrocyte mass. Binds
to EPOR leading to EPOR dimerization and JAK2 activation.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon synthesizes mouse Epo as a secreted hypoxia-inducible endocrine cytokine that
binds EPOR on erythroid progenitors and activates JAK2-dependent signaling required
for survival and terminal differentiation in definitive erythropoiesis.
reference_section_type: RESULTS
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon reports that mouse Epo and Epor null mutants have impaired definitive erythropoiesis,
severe anemia, and embryonic lethality around E13-E13.5.
reference_section_type: RESULTS
- reference_id: PMID:15591122
supporting_text: mobilization and differentiation of erythroid progenitors in the adult
spleen
reference_section_type: ABSTRACT
- reference_id: PMID:21095239
supporting_text: Epo-activated JNK1 phosphorylated Bad at threonine 201
reference_section_type: ABSTRACT
- reference_id: PMID:17300687
supporting_text: destroyed Hb-containing cells and resulted in apoptosis
reference_section_type: ABSTRACT
- reference_id: file:mouse/Epo/Epo-deep-research-falcon.md
supporting_text: >-
Falcon identifies erythropoietin-mediated erythroid survival and hemoglobin accumulation
as a downstream biological outcome of EPOR signaling.
reference_section_type: RESULTS
proposed_new_terms: []
suggested_questions:
- question: >-
Which non-erythroid Epo annotations in mouse have direct endogenous-ligand evidence strong
enough to keep in GO, and which should be retired as orthology-transfer over-annotations?
experts:
- erythropoietin signaling curators
- mouse developmental biology curators
- question: >-
Should GO annotation for Epo use erythropoietin receptor binding plus Epo-mediated signaling
instead of protein kinase activator activity for ligand-driven JAK2 activation?
experts:
- GO molecular function curators
- cytokine signaling experts
- question: >-
Can the cardiac/coronary developmental TAS annotations from PMID:20299672 be traced to
direct Epo-specific statements in full text, or should they be replaced by broader non-core
angiogenesis context only?
experts:
- cardiovascular development curators
- MGI/Reactome curators
suggested_experiments:
- experiment_type: Endogenous ligand-receptor signaling assay
description: >-
In primary mouse erythroid progenitors, perturb endogenous Epo or EPOR and measure JAK2,
STAT5, ERK, and Bad phosphorylation together with survival and differentiation readouts.
hypothesis: >-
Epo core function is EPOR ligand activity that drives JAK2/STAT and survival signaling
in erythroid progenitors.
- experiment_type: Context-specific non-erythroid validation
description: >-
Use Epo conditional loss or neutralization in candidate neural, immune, and cardiac contexts
represented by transferred annotations, with rescue by physiological Epo, to test whether
endogenous Epo is required for the annotated process.
hypothesis: >-
Most broad non-erythroid transferred annotations will not show a direct endogenous Epo
requirement comparable to erythropoiesis.
- experiment_type: Secreted versus cell-surface localization check
description: >-
Use endogenous tagging or validated antibodies in renal Epo-producing cells and erythroid
target cells to distinguish intracellular production/secretory pathway signal from extracellular
ligand and cell-surface receptor localization.
hypothesis: >-
Epo protein is secreted/extracellular, and cell-surface signal in GOA reflects EPOR-bound
ligand or receptor localization rather than Epo as a membrane-resident protein.