lov-1

UniProt ID: Q09624
Organism: Caenorhabditis elegans
Review Status: COMPLETE
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Gene Description

LOV-1 (Location Of Vulva defective 1) is the C. elegans ortholog of human PKD1/Polycystin-1. It is a large membrane protein with multiple transmembrane domains, a PLAT domain, and a GPS autoproteolytic cleavage site. LOV-1 functions as part of a mechanosensory receptor complex with PKD-2 (the C. elegans TRPP2/Polycystin-2 ortholog) in male-specific sensory neurons. This complex is required for male mating behaviors, specifically response to hermaphrodite contact and vulva location. LOV-1 localizes to sensory cilia in ray neurons, hook neurons, and cephalic (CEM) neurons of adult males. The protein interacts with ATP-2 (F1-ATP synthase beta subunit) via its PLAT domain, with casein kinase II regulatory subunit KIN-10, and with STAM-1 for endosomal trafficking. LOV-1 and PKD-2 act in the same genetic pathway, as double mutants show no enhancement over single mutants.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0016020 membrane
IBA
GO_REF:0000033
ACCEPT
Summary: LOV-1 is a multi-pass transmembrane protein with 11 predicted transmembrane helices according to UniProt. The membrane annotation is well-supported by phylogenetic inference across polycystin family members.
Reason: LOV-1 is clearly a membrane protein based on its domain architecture (multiple TM domains, GPS region, PLAT domain). UniProt annotation indicates "Multi-pass membrane protein" and the IBA annotation is consistent with polycystin family conservation.
Supporting Evidence:
PMID:10517638
lov-1 encodes a putative membrane protein with a mucin-like, serine-threonine-rich amino terminus followed by two blocks of homology to human polycystins
file:worm/lov-1/lov-1-deep-research-falcon.md
model: Edison Scientific Literature
GO:0005262 calcium channel activity
IBA
GO_REF:0000033
MODIFY
Summary: The IBA annotation infers calcium channel activity based on polycystin family membership. In mammals, polycystin-1 and polycystin-2 form a mechanosensitive cation channel. However, direct evidence for LOV-1 having intrinsic calcium channel activity is limited; rather, LOV-1 appears to function as a receptor that partners with the TRP channel PKD-2.
Reason: LOV-1 is a PC1-family member that partners with the TRPP channel PKD-2. The channel activity likely resides primarily in PKD-2, while LOV-1 functions as a receptor component of the complex. A more accurate annotation would be "calcium channel regulator activity" or simply retain the broader "cation channel activity" annotation if the complex is considered a functional unit. However, given the IBA evidence across the polycystin family, this annotation is not entirely wrong but may be an over-annotation for LOV-1 specifically.
Supporting Evidence:
PMID:11553327
It has recently been demonstrated that polycystin-1 and polycystin-2 (encoded by PKD1 and PKD2, respectively) assemble to form a cation channel in vitro
GO:0050982 detection of mechanical stimulus
IBA
GO_REF:0000033
ACCEPT
Summary: LOV-1 functions as a mechanosensory receptor in male-specific sensory neurons. The LOV-1/PKD-2 complex detects contact with the hermaphrodite during mating. This annotation is well-supported by phylogenetic inference and functional studies.
Reason: LOV-1 is required for response to hermaphrodite contact during male mating, which is a mechanosensory behavior. The polycystin complex (PC1/PC2) functions as a mechanosensor in both mammals and C. elegans. The IBA annotation is appropriate.
Supporting Evidence:
PMID:10517638
lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location
PMID:12411744
Based on the role of polycystins in C. elegans sensory neuron function and the conservation of PKD pathways we suggest that polycystins act as sensors of the extracellular environment
IEA
GO_REF:0000044
ACCEPT
Summary: LOV-1 localizes to sensory cilia in male-specific neurons. This is well-documented by multiple publications using GFP fusion proteins.
Reason: The IEA annotation based on UniProt subcellular location is correct and supported by experimental evidence (IDA annotations with same GO term exist). LOV-1::GFP localizes to cilia and ciliary base.
Supporting Evidence:
PMID:11553327
LOV-1::GFP and PKD-2::GFP are expressed in the same male-specific sensory neurons and are concentrated in cilia and cell bodies
GO:0016020 membrane
IEA
GO_REF:0000044
ACCEPT
Summary: Duplicate membrane annotation from UniProt subcellular location mapping. LOV-1 is a multi-pass transmembrane protein.
Reason: This is a valid annotation. LOV-1 has 11 predicted transmembrane helices and is clearly membrane-localized. Duplicate annotations with different evidence codes are acceptable.
Supporting Evidence:
PMID:10517638
lov-1 encodes a putative membrane protein
GO:0070588 calcium ion transmembrane transport
IEA
GO_REF:0000108
MODIFY
Summary: This annotation is inferred from the calcium channel activity annotation. Since the calcium channel activity annotation is questionable for LOV-1 specifically (channel activity may reside primarily in PKD-2), this inferred annotation is similarly uncertain.
Reason: LOV-1 is part of a receptor-channel complex with PKD-2. The transport activity is more directly attributable to PKD-2. LOV-1's role is as a receptor/regulatory component. This annotation follows from the MF annotation which may be an over-annotation.
Supporting Evidence:
PMID:11553327
polycystin-1 and polycystin-2 (encoded by PKD1 and PKD2, respectively) assemble to form a cation channel in vitro
GO:0005515 protein binding
IPI
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
MODIFY
Summary: LOV-1 physically interacts with ATP-2 (F1-ATP synthase beta subunit) via its PLAT domain. This interaction is documented in PMID:15563610.
Reason: The generic "protein binding" annotation is uninformative. LOV-1 interacts with ATP-2 via its PLAT domain, which should be captured with a more specific term. The annotation should be replaced with "protein domain specific binding" which better reflects the documented PLAT domain-mediated interaction.
Proposed replacements: protein domain specific binding
Supporting Evidence:
PMID:15563610
ATP-2, the beta subunit of the ATP synthase, physically associates with the LOV-1 PLAT domain and that this interaction is evolutionarily conserved
GO:0005515 protein binding
IPI
PMID:16481400
Casein kinase II and calcineurin modulate TRPP function and ...
MODIFY
Summary: LOV-1 interacts with KIN-10, the regulatory subunit of casein kinase II. This interaction was identified in a yeast two-hybrid screen and validated.
Reason: Generic "protein binding" is uninformative. The interaction with KIN-10 (casein kinase II regulatory subunit) is through the LOV-1 C-terminus. A more specific term would be preferable.
Proposed replacements: protein domain specific binding
Supporting Evidence:
PMID:16481400
We identified the regulatory subunit of the serine-threonine casein kinase II (CK2) as a binding partner of LOV-1 and human PC-1
GO:0071683 sensory dendrite
NAS
PMID:11553327
The Caenorhabditis elegans autosomal dominant polycystic kid...
ACCEPT
Summary: LOV-1 localizes to sensory structures of male-specific neurons. The neurons expressing LOV-1 have ciliated sensory endings. This annotation captures localization to the sensory process.
Reason: LOV-1::GFP is concentrated in the sensory endings of ray, hook, and CEM neurons. These sensory neurons have ciliated dendrites. The NAS annotation is appropriate based on the published expression pattern.
Supporting Evidence:
PMID:11553327
LOV-1::GFP and PKD-2::GFP are expressed in the same male-specific sensory neurons and are concentrated in cilia and cell bodies
GO:1902435 regulation of male mating behavior
NAS
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: LOV-1 is required for male mating behavior. Loss of lov-1 function results in defects in response to hermaphrodite contact and vulva location during mating.
Reason: This accurately describes LOV-1 function. The gene was identified based on male mating defects and is named for the vulva location defect. LOV-1 is required for proper execution of male mating behavior.
Supporting Evidence:
PMID:10517638
Here we identify a gene, lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location
GO:0019904 protein domain specific binding
IPI
PMID:17581863
STAM and Hrs down-regulate ciliary TRP receptors.
ACCEPT
Summary: LOV-1 interacts with STAM-1A (signal transduction adaptor molecule) via its C-terminus. This interaction is involved in endosomal trafficking and degradation of the LOV-1/PKD-2 complex.
Reason: The protein domain specific binding annotation is appropriate for this interaction. LOV-1 C-terminus interacts with STAM-1A C-terminus, representing a domain-specific interaction.
Supporting Evidence:
PMID:17581863
signal transduction adaptor molecule STAM-1A interacts with C. elegans LOV-1 (PC1), and that STAM functions with hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs) on early endosomes to direct the LOV-1-PKD-2 complex for lysosomal degradation
GO:0034606 response to hermaphrodite contact
IMP
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: lov-1 mutant males are defective in response behavior - the initial sensory response when males contact a hermaphrodite. This is one of the two core behavioral phenotypes of lov-1 mutants.
Reason: This is a core function of LOV-1. The original paper identified lov-1 mutants based on defects in response and vulva location behaviors. This annotation is well-supported by mutant phenotype analysis.
Supporting Evidence:
PMID:10517638
lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location
GO:0034606 response to hermaphrodite contact
IMP
PMID:11553327
The Caenorhabditis elegans autosomal dominant polycystic kid...
ACCEPT
Summary: Confirms the response behavior defect in lov-1 mutants and demonstrates that lov-1 and pkd-2 act in the same pathway.
Reason: This annotation provides additional evidence for LOV-1 function in response behavior, demonstrating the phenotype is consistent across studies.
Supporting Evidence:
PMID:11553327
Mutations in either lov-1 or pkd-2 result in identical male sensory behavioral defects. Also, pkd-2;lov-1 double mutants are no more severe than either of the single mutants, indicating that lov-1 and pkd-2 act together.
GO:0034606 response to hermaphrodite contact
IMP
PMID:12411744
Towards understanding the polycystins.
ACCEPT
Summary: Confirms response behavior defects in lov-1 mutants in the context of polycystin functional studies.
Reason: Additional confirmation of LOV-1 role in response behavior from an independent study.
Supporting Evidence:
PMID:12411744
Mutation analysis in C. elegans showed similarly compromised male mating behaviors in all single and double lov-1 and pkd-2 mutants
GO:0034606 response to hermaphrodite contact
IMP
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: Demonstrates that ATP-2 and LOV-1 act in the same pathway for response behavior.
Reason: Confirms LOV-1 role in response behavior and extends understanding of the pathway to include ATP-2 as a signaling component.
Supporting Evidence:
PMID:15563610
atp-2, lov-1, and pkd-2 act in the same molecular pathway
GO:0034608 vulval location
IMP
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: lov-1 mutant males are defective in vulva location - the behavior where males scan the hermaphrodite body to locate the vulva for spicule insertion. This is the phenotype for which the gene is named.
Reason: This is a core function of LOV-1 and the basis for the gene name (Location Of Vulva). Well-supported by mutant analysis in the original paper.
Supporting Evidence:
PMID:10517638
Here we identify a gene, lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location
GO:0034608 vulval location
IMP
PMID:11553327
The Caenorhabditis elegans autosomal dominant polycystic kid...
ACCEPT
Summary: Confirms vulva location defect in lov-1 mutants and shows lov-1 and pkd-2 act together.
Reason: Confirms the vulva location phenotype and demonstrates genetic pathway relationship with pkd-2.
Supporting Evidence:
PMID:11553327
Mutations in either lov-1 or pkd-2 result in identical male sensory behavioral defects
GO:0034608 vulval location
IMP
PMID:12411744
Towards understanding the polycystins.
ACCEPT
Summary: Confirms vulva location phenotype in context of polycystin function studies.
Reason: Additional confirmation of vulva location phenotype from independent study.
Supporting Evidence:
PMID:12411744
Mutation analysis in C. elegans showed similarly compromised male mating behaviors in all single and double lov-1 and pkd-2 mutants
GO:0034608 vulval location
IMP
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: Demonstrates vulva location defects and ATP-2 pathway involvement.
Reason: Confirms vulva location phenotype and extends pathway understanding.
Supporting Evidence:
PMID:15563610
atp-2, lov-1, and pkd-2 act in the same molecular pathway
GO:0005515 protein binding
IPI
PMID:17581863
STAM and Hrs down-regulate ciliary TRP receptors.
MODIFY
Summary: Duplicate annotation for protein binding with STAM-1. This appears to be redundant with the protein domain specific binding annotation.
Reason: This is a less informative duplicate of the protein domain specific binding annotation (GO:0019904) from the same reference. The interaction with STAM-1A is domain-specific and should be annotated with the more informative term.
Proposed replacements: protein domain specific binding
Supporting Evidence:
PMID:17581863
signal transduction adaptor molecule STAM-1A interacts with C. elegans LOV-1 (PC1)
IDA
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: LOV-1 localizes to cilia in male-specific sensory neurons, demonstrated by GFP fusion protein imaging.
Reason: Direct observation of LOV-1::GFP localization to cilia. Well-supported experimental evidence.
Supporting Evidence:
PMID:15563610
The C. elegans polycystins LOV-1 and PKD-2 are required for male mating behaviors and are localized to sensory cilia
GO:0060179 male mating behavior
IMP
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: lov-1 mutants show defects in male mating behavior, specifically in response and vulva location steps.
Reason: This is a core function of LOV-1. The gene is required for proper male mating behavior.
Supporting Evidence:
PMID:15563610
Disrupting the function of the ATP synthase or overexpression of atp-2 results in a male mating behavior defect
GO:0097730 non-motile cilium
IDA
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: LOV-1 is expressed in sensory neurons with non-motile (primary) cilia. The ray, hook, and CEM neurons have sensory cilia that do not beat.
Reason: The sensory cilia of C. elegans sensory neurons are non-motile cilia. LOV-1 localizes to these structures.
Supporting Evidence:
PMID:10517638
lov-1 is expressed in adult males in sensory neurons of the rays, hook and head
GO:0097730 non-motile cilium
IDA
PMID:17581863
STAM and Hrs down-regulate ciliary TRP receptors.
ACCEPT
Summary: Confirms LOV-1 localization to non-motile cilia with additional detail about ciliary base localization.
Reason: Additional evidence for ciliary localization showing both cilium proper and ciliary base localization.
Supporting Evidence:
PMID:17581863
In a stam-1 mutant, both LOV-1 and PKD-2 improperly accumulate at the ciliary base
GO:0007617 mating behavior
IMP
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: lov-1 mutants are defective in mating behavior. This is a broader term than "male mating behavior" but accurately describes the phenotype.
Reason: LOV-1 is required for mating behavior. This broader term encompasses the specific defects in response and vulva location.
Supporting Evidence:
PMID:10517638
lov-1 (for location of vulva), that is required for two male sensory behaviours
GO:0007617 mating behavior
IMP
PMID:11553327
The Caenorhabditis elegans autosomal dominant polycystic kid...
ACCEPT
Summary: Confirms mating behavior defects in lov-1 mutants.
Reason: Additional evidence for mating behavior requirement.
Supporting Evidence:
PMID:11553327
Mutations in either lov-1 or pkd-2 result in identical male sensory behavioral defects
GO:0007617 mating behavior
IGI
PMID:11553327
The Caenorhabditis elegans autosomal dominant polycystic kid...
ACCEPT
Summary: The IGI annotation based on genetic interaction with pkd-2 supports the mating behavior annotation. Double mutants are no more severe than single mutants.
Reason: The genetic interaction evidence shows lov-1 and pkd-2 act in the same pathway for mating behavior.
Supporting Evidence:
PMID:11553327
pkd-2;lov-1 double mutants are no more severe than either of the single mutants, indicating that lov-1 and pkd-2 act together
GO:0043025 neuronal cell body
IDA
PMID:10517638
A polycystic kidney-disease gene homologue required for male...
ACCEPT
Summary: LOV-1::GFP is observed in cell bodies of male-specific neurons in addition to cilia.
Reason: LOV-1 is expressed in and localizes to neuronal cell bodies, as demonstrated by GFP fusion imaging.
Supporting Evidence:
PMID:11553327
LOV-1::GFP and PKD-2::GFP are expressed in the same male-specific sensory neurons and are concentrated in cilia and cell bodies
GO:0007617 mating behavior
IMP
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: Confirms mating behavior defects and extends to ATP-2 pathway.
Reason: Additional evidence for mating behavior requirement.
Supporting Evidence:
PMID:15563610
Disrupting the function of the ATP synthase or overexpression of atp-2 results in a male mating behavior defect
GO:0019904 protein domain specific binding
IPI
PMID:15563610
ATP-2 interacts with the PLAT domain of LOV-1 and is involve...
ACCEPT
Summary: LOV-1 PLAT domain interacts with ATP-2 N-terminus. This is a well-characterized domain-specific interaction.
Reason: The interaction between LOV-1 PLAT domain and ATP-2 is specific and evolutionarily conserved. Appropriate annotation.
Supporting Evidence:
PMID:15563610
ATP-2, the beta subunit of the ATP synthase, physically associates with the LOV-1 PLAT domain and that this interaction is evolutionarily conserved

Core Functions

LOV-1 functions as a mechanosensory receptor in male sensory cilia, forming a complex with PKD-2 (TRPP2/Polycystin-2) to detect mechanical stimuli during male mating behavior. LOV-1 acts as the receptor component that partners with the ion channel PKD-2.

Supporting Evidence:
  • PMID:10517638
    Here we identify a gene, lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location
  • PMID:11553327
    LOV-1::GFP and PKD-2::GFP are expressed in the same male-specific sensory neurons and are concentrated in cilia and cell bodies

LOV-1 PLAT domain mediates interactions with signaling partners ATP-2 (ATP synthase beta subunit), KIN-10 (CK2 regulatory subunit), and STAM-1 (endosomal adaptor) for signal transduction and receptor trafficking.

Cellular Locations:
Supporting Evidence:
  • PMID:15563610
    ATP-2, the beta subunit of the ATP synthase, physically associates with the LOV-1 PLAT domain and that this interaction is evolutionarily conserved
  • PMID:17581863
    signal transduction adaptor molecule STAM-1A interacts with C. elegans LOV-1 (PC1)

References

Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
A polycystic kidney-disease gene homologue required for male mating behaviour in C. elegans.
  • lov-1 was identified as a gene required for male mating behavior, specifically response to hermaphrodite contact and vulva location.
    "Here we identify a gene, lov-1 (for location of vulva), that is required for two male sensory behaviours: response and vulva location."
  • LOV-1 is expressed in male-specific sensory neurons: ray neurons, hook neurons, and head cephalic (CEM) neurons.
    "lov-1 is expressed in adult males in sensory neurons of the rays, hook and head"
  • LOV-1 is homologous to human PKD1 polycystin.
    "LOV-1 is the closest C. elegans homologue of PKD1"
The Caenorhabditis elegans autosomal dominant polycystic kidney disease gene homologs lov-1 and pkd-2 act in the same pathway.
  • lov-1 and pkd-2 act in the same genetic pathway for mating behavior.
    "pkd-2;lov-1 double mutants are no more severe than either of the single mutants, indicating that lov-1 and pkd-2 act together"
  • LOV-1::GFP and PKD-2::GFP colocalize in cilia and cell bodies of male-specific neurons.
    "LOV-1::GFP and PKD-2::GFP are expressed in the same male-specific sensory neurons and are concentrated in cilia and cell bodies"
  • lov-1 is not required for cilia structure.
    "the cilia of lov-1 and pkd-2 single mutants and of lov-1;pkd-2 double mutants are normal as judged by electron microscopy"
Towards understanding the polycystins.
  • LOV-1 and PKD-2 localize to sensory neuron endings and may function as mechanosensors or chemosensors.
    "Expression analysis localized LOV-1 and PKD-2 to the ends of sensory neurons in male tails and to the tips of CEM neurons in the head, consistent with functions as chemo- or mechanosensors"
ATP-2 interacts with the PLAT domain of LOV-1 and is involved in Caenorhabditis elegans polycystin signaling.
  • ATP-2 physically interacts with LOV-1 PLAT domain and this interaction is conserved.
    "ATP-2, the beta subunit of the ATP synthase, physically associates with the LOV-1 PLAT domain and that this interaction is evolutionarily conserved"
  • ATP-2, LOV-1, and PKD-2 act in the same signaling pathway.
    "atp-2, lov-1, and pkd-2 act in the same molecular pathway"
  • ATP synthase components colocalize with LOV-1 and PKD-2 in cilia.
    "ATP-2 and other ATP synthase components colocalize with LOV-1 and PKD-2 in cilia"
Casein kinase II and calcineurin modulate TRPP function and ciliary localization.
  • CK2 regulatory subunit (KIN-10) binds LOV-1 and modulates PKD-2 ciliary localization.
    "We identified the regulatory subunit of the serine-threonine casein kinase II (CK2) as a binding partner of LOV-1 and human PC-1"
  • Phosphorylation regulates PKD-2 ciliary localization.
    "A dynamic phosphorylation-dephosphorylation cycle may represent a mechanism for modulating TRPP activity, cellular sensation, and ciliary protein localization"
STAM and Hrs down-regulate ciliary TRP receptors.
  • STAM-1A interacts with LOV-1 and directs LOV-1/PKD-2 for lysosomal degradation.
    "signal transduction adaptor molecule STAM-1A interacts with C. elegans LOV-1 (PC1), and that STAM functions with hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs) on early endosomes to direct the LOV-1-PKD-2 complex for lysosomal degradation"
  • LOV-1 localizes to both ciliary base and cilium proper.
    "In a stam-1 mutant, both LOV-1 and PKD-2 improperly accumulate at the ciliary base"
file:worm/lov-1/lov-1-deep-research-falcon.md
Deep research report on lov-1

Tags

caeel-ciliopathy

๐Ÿ“š Additional Documentation

Deep Research Falcon

(lov-1-deep-research-falcon.md)

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template_variables:
organism: worm
gene_id: lov-1
gene_symbol: lov-1
uniprot_accession: Q09624
protein_description: 'RecName: Full=Location of vulva defective 1; AltName: Full=Polycystic
kidney disease 1 protein homolog; AltName: Full=Polycystin-1; Flags: Precursor;'
gene_info: Name=lov-1; Synonyms=pkd-1; ORFNames=ZK945.9/ZK945.10;
organism_full: Caenorhabditis elegans.
protein_family: Belongs to the polycystin family. .
protein_domains: GAIN_B. (IPR057244); GPS. (IPR000203); PKD1_2_channel. (IPR013122);
PLAT/LH2_dom. (IPR001024); PLAT/LH2_dom_sf. (IPR036392)
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citation_count: 28


Question

Gene Research for Functional Annotation

โš ๏ธ CRITICAL: Gene/Protein Identification Context

BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.

Target Gene/Protein Identity (from UniProt):

  • UniProt Accession: Q09624
  • Protein Description: RecName: Full=Location of vulva defective 1; AltName: Full=Polycystic kidney disease 1 protein homolog; AltName: Full=Polycystin-1; Flags: Precursor;
  • Gene Information: Name=lov-1; Synonyms=pkd-1; ORFNames=ZK945.9/ZK945.10;
  • Organism (full): Caenorhabditis elegans.
  • Protein Family: Belongs to the polycystin family. .
  • Key Domains: GAIN_B. (IPR057244); GPS. (IPR000203); PKD1_2_channel. (IPR013122); PLAT/LH2_dom. (IPR001024); PLAT/LH2_dom_sf. (IPR036392)

MANDATORY VERIFICATION STEPS:

  1. Check if the gene symbol "lov-1" matches the protein description above
  2. Verify the organism is correct: Caenorhabditis elegans.
  3. Check if protein family/domains align with what you find in literature
  4. If you find literature for a DIFFERENT gene with the same or similar symbol, STOP

If Gene Symbol is Ambiguous or You Cannot Find Relevant Literature:

DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'lov-1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information

Research Target:

Please provide a comprehensive research report on the gene lov-1 (gene ID: lov-1, UniProt: Q09624) in worm.

The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.

You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.

We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.

We are interested in where in or outside the cell the gene product carries out its function.

We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.

Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.

Output

Question: You are an expert researcher providing comprehensive, well-cited information.

Provide detailed information focusing on:
1. Key concepts and definitions with current understanding
2. Recent developments and latest research (prioritize 2023-2024 sources)
3. Current applications and real-world implementations
4. Expert opinions and analysis from authoritative sources
5. Relevant statistics and data from recent studies

Format as a comprehensive research report with proper citations. Include URLs and publication dates where available.
Always prioritize recent, authoritative sources and provide specific citations for all major claims.

Gene Research for Functional Annotation

โš ๏ธ CRITICAL: Gene/Protein Identification Context

BEFORE YOU BEGIN RESEARCH: You MUST verify you are researching the CORRECT gene/protein. Gene symbols can be ambiguous, especially for less well-characterized genes from non-model organisms.

Target Gene/Protein Identity (from UniProt):

  • UniProt Accession: Q09624
  • Protein Description: RecName: Full=Location of vulva defective 1; AltName: Full=Polycystic kidney disease 1 protein homolog; AltName: Full=Polycystin-1; Flags: Precursor;
  • Gene Information: Name=lov-1; Synonyms=pkd-1; ORFNames=ZK945.9/ZK945.10;
  • Organism (full): Caenorhabditis elegans.
  • Protein Family: Belongs to the polycystin family. .
  • Key Domains: GAIN_B. (IPR057244); GPS. (IPR000203); PKD1_2_channel. (IPR013122); PLAT/LH2_dom. (IPR001024); PLAT/LH2_dom_sf. (IPR036392)

MANDATORY VERIFICATION STEPS:

  1. Check if the gene symbol "lov-1" matches the protein description above
  2. Verify the organism is correct: Caenorhabditis elegans.
  3. Check if protein family/domains align with what you find in literature
  4. If you find literature for a DIFFERENT gene with the same or similar symbol, STOP

If Gene Symbol is Ambiguous or You Cannot Find Relevant Literature:

DO NOT PROCEED WITH RESEARCH ON A DIFFERENT GENE. Instead:
- State clearly: "The gene symbol 'lov-1' is ambiguous or literature is limited for this specific protein"
- Explain what you found (e.g., "Found extensive literature on a different gene with the same symbol in a different organism")
- Describe the protein based ONLY on the UniProt information provided above
- Suggest that the protein function can be inferred from domain/family information

Research Target:

Please provide a comprehensive research report on the gene lov-1 (gene ID: lov-1, UniProt: Q09624) in worm.

The research report should be a detailed narrative explaining the function, biological processes, and localization of the gene product. Citations should be given for all claims.

You should prioritize authoritative reviews and primary scientific literature when conducting research. You can supplement
this with annotations you find in gene/protein databases, but these can be outdated or inaccurate.

We are specifically interested in the primary function of the gene - for enzymes, what reaction is catalyzed, and what is the substrate specificity? For transporters, what is the substrate? For structural proteins or adapters, what is the broader structural role? For signaling molecules, what is the role in the pathway.

We are interested in where in or outside the cell the gene product carries out its function.

We are also interested in the signaling or biochemical pathways in which the gene functions. We are less interested in broad pleiotropic effects, except where these elucidate the precise role.

Include evidence where possible. We are interested in both experimental evidence as well as inference from structure, evolution, or bioinformatic analysis. Precise studies should be prioritized over high-throughput, where available.

Research plan and verification
We verified the target as C. elegans lov-1 (UniProt Q09624), encoding the polycystin-1 homolog โ€œLocation of vulva defective 1โ€ (LOV-1), a member of the polycystin family bearing hallmark domains including a GAIN/GPS module, PLAT/LH2 domain, and a multi-pass C-terminal membrane region that partners with PKD-2 (polycystin-2) in cilia. Experimental studies in C. elegans explicitly use lov-1/pkd-1 as the PC1 homolog and map these domains and functions to cilia and ciliary extracellular vesicles (EVs) (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 1-2, walsh2022trackingnand pages 4-6).

Key concepts and definitions with current understanding
- Protein identity and domains. LOV-1 is the C. elegans homolog of mammalian polycystin-1 (PC1). It possesses a large extracellular N-terminus with a GAIN domain containing a GPCR proteolysis site (GPS), a PLAT/LH2 domain, and an ~11-transmembrane C-terminal region. LOV-1 undergoes GPS-dependent autoproteolysis to yield an N-terminal (NTM) and a C-terminal membrane-tethered fragment (CTM). GPS point mutation (e.g., C2181S) abolishes proper CTM localization and phenocopies lov-1 null in behavior, demonstrating the functional necessity of cleavage (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 6-8, maguire2015myristoylatedcil7is pages 13-17).
- Subcellular localization. LOV-1 is a ciliary protein. Endogenous dual-tagging and live imaging show CTM LOV-1 localizes to the ciliary membrane and tip and is shed on environmentally released ciliary EVs, whereas NTM is enriched at the ciliary base, cilium proper, and extracellular matrix surrounding the cilium, and is excluded from tip EVs (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 2-4, walsh2022trackingnand pages 4-6).
- Functional complex with PKD-2. CTM LOV-1 co-traffics and co-localizes with PKD-2 from ER/soma to dendritic transport vesicles, to cilia, and into EVs. PKD-2 is required for CTMโ€™s somatic exit, ciliary targeting, and EV localization, while PKD-2 can enter cilia/EVs in the absence of LOV-1 (albeit with altered abundance/aggregation), indicating interdependent and independent behaviors within the polycystin pathway (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 8-12, walsh2022trackingnand pages 4-6).

Recent developments and latest research (priority 2023โ€“2024 where available; most recent 2025)
- LOV-1โ€“dependent EV cargo selection and EV subtype logic (Nature Communications 2025). A TurboID-based proximity-labeling strategy (EV-TurboID) mapped polycystin-associated ciliary EV cargos and uncovered a hierarchical assembly for distinct EV subtypes. LOV-1 is essential for loading multiple cargo classes onto PKD-2+ EVs: the polycystin complex recruits PACL-1 (a four-pass, channel-like protein), dorsal and ventral PAML C-type lectins, and TRAF-family proteins TRF-1 and TRF-2 into specific EV subtypes. Loss of lov-1 caused EVs deficient for these cargos; quantitative imaging showed, for example, high PACL-1โ€“PKD-2 colocalization in WT (Pearson R โ‰ˆ 0.83โ€“0.84, p < 2.2ร—10โˆ’16) that was lost in lov-1 mutants, where PACL-1 remained in cell bodies and failed to enter cilia/EVs (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (nikonorova2025polycystinsrecruitcargo pages 1-2, nikonorova2025polycystinsrecruitcargo pages 9-10).
- Assembly dependencies within EV subtypes (Nature Communications 2025). The study reports hierarchical requirements: PKD-2 assembles with LOV-1 first, enabling subsequent recruitment of PACL-1 and PAMLs; TRF-1 and TRF-2 display mutual dependencies for ciliary/EV loading (e.g., trf-2 mutants lacking TRF-1 in EVs and ~10-fold reductions in TRF-2 ciliary levels in trf-1 mutants). Importantly, LOV-1 is required for loading TRF-1/2 on PKD-2+ EVs, as shown by drops in colocalization metrics in lov-1 mutants (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (nikonorova2025polycystinsrecruitcargo pages 7-8, nikonorova2025polycystinsrecruitcargo pages 5-6, nikonorova2025polycystinsrecruitcargo pages 10-11).
- Differential LOV-1 N- vs C-terminus targeting refined (Dec 2022). Live imaging corroborated GPS-dependent processing and differential trafficking kinetics: CTM moves faster anterogradely (โ‰ˆ0.2โ€“0.3 ฮผm/s faster than NTM), accumulates at ciliary tips, and is released on EVs; NTM is excluded from tip EVs and accumulates in extracellular space around cilia (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 8-12, walsh2022trackingnand pages 2-4).

Current applications and real-world implementations
- EV-TurboID for resolving EV cargo composition. The EV-TurboID approach, implemented in living C. elegans, enables cell- and tissue-specific mapping of ciliary EV subtypes and their dependence on core scaffolds like LOV-1. This is directly applicable to dissecting conserved mechanisms of cargo sorting in cilia-derived vesicles relevant to ciliopathies and PKD biology (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (nikonorova2025polycystinsrecruitcargo pages 1-2, nikonorova2025polycystinsrecruitcargo pages 8-9).
- Live endogenous tagging for trafficking/processing. Endogenous dual-tagging of LOV-1 N- and C-termini supports visualization of GPS cleavage, differential targeting, and co-transport with PKD-2, establishing an in vivo platform to interrogate ciliary sorting, EV release, and behavioral outputs (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 2-4, walsh2022trackingnand pages 4-6).

Expert opinions and analysis from authoritative sources
- Mechanistic consensus: LOV-1/PKD-2 define a conserved ciliary polycystin pathway that controls sensory signaling and inter-organismal communication via EVs. The 2022 in vivo imaging and the 2025 EV-cargo mapping together support a model in which LOV-1 (via its CTM) scaffolds PKD-2 and recruits additional membrane cargos into specific EV subtypes, with GPS cleavage being essential for proper localization and function (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560; Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (walsh2022trackingnand pages 6-8, walsh2022trackingnand pages 8-12, nikonorova2025polycystinsrecruitcargo pages 1-2, nikonorova2025polycystinsrecruitcargo pages 7-8).
- Ciliary homeostasis and glia interactions. Studies in 2021 show that ectocytosis/EV budding functions as a safeguard pathway to remove excess ciliary cargo, and that glial uptake of ectosomes shapes cilia, emphasizing neuronโ€“glia regulation of ciliary composition. These principles frame polycystin-associated EVs within broader ciliary cargo homeostasis (Sep 2021; eLife: https://doi.org/10.7554/elife.67670; Feb 2021; bioRxiv: https://doi.org/10.1101/2021.02.14.430969) (maguire2015myristoylatedcil7is pages 13-17, nikonorova2025polycystinsrecruitcargo pages 7-8).
- ECM regulation of polycystin localization. Work in C. elegans indicates that extracellular matrix components regulate polycystin localization, ciliary EV release, and ciliary morphology, connecting tissue context to polycystin function (Jul 2018; bioRxiv preprint: https://doi.org/10.1101/376152) (walsh2022trackingnand pages 20-21).

Relevant statistics and data from recent studies
- GPS processing is essential for function: a GPS point mutant (C2181S) abolishes CTM localization at ciliary tips/EVs and phenocopies lov-1 null in male mating assays (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 6-8).
- Differential trafficking kinetics: CTM exhibits more anterograde events and faster transport than NTM (โ‰ˆ0.2โ€“0.3 ฮผm/s faster), accumulates at tips, and is shed on EVs (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 8-12).
- EV cargo code: Strong colocalization of PACL-1 with PKD-2 in WT cilia/EVs (Pearson R ~0.83โ€“0.84; p < 2.2ร—10โˆ’16) collapses in lov-1 mutants; TRF-1/2 show hierarchical interdependence and LOV-1 dependence for EV loading, including ~10-fold TRF-2 reduction in trf-1 mutants (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (nikonorova2025polycystinsrecruitcargo pages 9-10, nikonorova2025polycystinsrecruitcargo pages 7-8, nikonorova2025polycystinsrecruitcargo pages 5-6).

Biological role, pathways, and localization of LOV-1
- Primary role. LOV-1 functions as the PC1-like scaffold and sensory module in the ciliary membrane of male-specific neurons, where its CTM associates with PKD-2 to form a functional complex; LOV-1 is additionally required independently of PKD-2 for specific chemosensory behaviors (ascaroside #3 detection), pointing to dual polycystin-coupled and polycystin-uncoupled signaling roles (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 12-14, walsh2022trackingnand pages 8-12).
- Subcellular site of action. LOV-1 CTM operates at the ciliary membrane, concentrating at the ciliary tipโ€”an EV-biogenesis zoneโ€”where it co-packages with PKD-2 into EVs for environmental release; LOV-1 NTM resides in the cilium and extracellular matrix but is excluded from EVs (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 2-4, walsh2022trackingnand pages 8-12).
- EV-mediated signaling. LOV-1 scaffolds cargo-specific EV subtypes: PKD-2+ EVs carry PACL-1, PAML-1/2, and TRF-1/2 in a LOV-1โ€“dependent manner, potentially creating distinct โ€œsignalosomesโ€ that may mediate inter-organismal communication and mating-related sensory functions (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3; Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (nikonorova2025polycystinsrecruitcargo pages 1-2, nikonorova2025polycystinsrecruitcargo pages 8-9, walsh2022trackingnand pages 12-14).
- Upstream regulation. ECM components and neuronโ€“glia interactions (phagocytic uptake of ectosomes) modulate ciliary morphology and receptor abundance; IFT dynamics and ectocytosis govern import/removal balance of ciliary cargo including polycystins (Jul 2018; bioRxiv: https://doi.org/10.1101/376152; Sep 2021; eLife: https://doi.org/10.7554/eLife.67670) (walsh2022trackingnand pages 20-21, maguire2015myristoylatedcil7is pages 13-17).

Limitations and open questions
- Biochemical detection of endogenous LOV-1 remains challenging due to low abundance; much of the mechanistic inference relies on endogenous tagging and live-cell imaging rather than biochemical purification (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 4-6).
- While the EV cargo code has been expanded (PACL-1, PAMLs, TRF-1/2), how these cargos modulate channel activity and behavior in cell-autonomous versus EV-mediated, non-autonomous contexts remains an active area (Apr 2025; Nature Communications: https://doi.org/10.1038/s41467-025-57512-3) (nikonorova2025polycystinsrecruitcargo pages 8-9).

Key facts summary
| Category | Specific finding | Evidence (short) | Source (URL, year) |
|---|---|---|---|
| Domain architecture | GAIN/GPS domain, PLAT/LH2, ~11 transmembrane segments; GPS undergoes autoproteolytic cleavage into N-terminal (NTM) and C-terminal (CTM) fragments | GPS-dependent autoproteolysis demonstrated; GPS point mutant (C2181S) disrupts CTM localization (GPS function) (walsh2022trackingnand pages 6-8) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| N- vs C-terminus localization | NTM is secreted to the extracellular matrix and excluded from ciliary-tip EVs; CTM is localized to ciliary membrane/tip and is present on environmentally released ciliary EVs | Distinct N- and C-terminal tag patterns in live imaging; NTM/CTM show different trafficking and EV incorporation (walsh2022trackingnand pages 2-4) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| Co-trafficking and interaction with PKD-2 | CTM co-traffics and co-localizes with PKD-2 from soma โ†’ dendrite โ†’ cilium; CTM requires PKD-2 for somatic exit and stability, while PKD-2 can localize to EVs independently | Co-transport, co-localization, and pkd-2 dependence for CTM shown by live imaging and mutant analyses (walsh2022trackingnand pages 8-12) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| Functional roles (male mating / chemosensation) | lov-1 is required for male mating behaviors; LOV-1 (but not always PKD-2) is necessary for chemosensation to ascaroside #3 in specific sensory circuits | Behavioral assays and circuit-specific analyses show lov-1 mutants defective in pheromone response; LOV-1 has pkd-2โ€“independent chemosensory roles (walsh2022trackingnand pages 12-14) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| EV cargo selection mechanisms | Polycystin CTM and PKD-2 are co-packaged into specific ciliary EVs; EV proteomics reveal heterogeneous cargo and suggest discrete EV "signalosomes" mediated by polycystins | Live co-release observation and EV proteome heterogeneity support selective cargo recruitment to EV subtypes (walsh2022trackingnand pages 12-14) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| Regulators/pathways affecting localization | Extracellular matrix components, IFT/ectocytosis balance, endosomal sorting/ubiquitin pathways, and glial phagocytosis modulate polycystin localization and EV release | Discussion and experimental links to ECM/IFT/ectocytosis and endosomal regulators affecting PKD-2/LOV-1 localization (walsh2022trackingnand pages 20-21) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |
| Evolutionary / clinical relevance | LOV-1 and PKD-2 are conserved with mammalian PC1/PC2; C. elegans findings inform ADPKD-related ciliary biology and polycystin function | Conservation and functional parallels to mammalian polycystins noted; worm model used to probe conserved mechanisms (walsh2022trackingnand pages 1-2) | https://doi.org/10.1371/journal.pgen.1010560 (2022) |

Table: Compact summary of C. elegans lov-1 (polycystin-1 homolog) key findings, evidence, and representative source (Walsh et al., PLoS Genet 2022). Useful as a quick reference linking domain architecture, localization, function, EV roles, regulators, and relevance to human PKD.

References (URLs and publication dates)
- Walsh JD, Wang J, DeHart M, Nikonorova IA, Srinivasan J, Barr MM. Tracking N- and C-termini of C. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics. 2022 Dec;18:e1010560. https://doi.org/10.1371/journal.pgen.1010560 (walsh2022trackingnand pages 1-2, walsh2022trackingnand pages 2-4, walsh2022trackingnand pages 12-14, walsh2022trackingnand pages 6-8, walsh2022trackingnand pages 20-21, walsh2022trackingnand pages 8-12, walsh2022trackingnand pages 4-6)
- Nikonorova IA, desRanleau E, Jacobs KC, Saul J, Walsh JD, Wang J, Barr MM. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in C. elegans. Nature Communications. 2025 Apr;16: Article DOI 10.1038/s41467-025-57512-3. https://doi.org/10.1038/s41467-025-57512-3 (nikonorova2025polycystinsrecruitcargo pages 7-8, nikonorova2025polycystinsrecruitcargo pages 5-6, nikonorova2025polycystinsrecruitcargo pages 1-2, nikonorova2025polycystinsrecruitcargo pages 13-14, nikonorova2025polycystinsrecruitcargo pages 8-9, nikonorova2025polycystinsrecruitcargo pages 10-11, nikonorova2025polycystinsrecruitcargo pages 9-10)
- Razzauti A, Laurent P. Ectocytosis prevents accumulation of ciliary cargo in C. elegans sensory neurons. eLife. 2021 Sep;10:e67670. https://doi.org/10.7554/elife.67670 (maguire2015myristoylatedcil7is pages 13-17)
- Razzauti A, Laurent P. Ectosome uptake by glia sculpts Caenorhabditis elegans sensory cilia. bioRxiv. 2021 Feb. https://doi.org/10.1101/2021.02.14.430969 (nikonorova2025polycystinsrecruitcargo pages 7-8)
- De Vore DM, Knobel KM, Nguyen KCQ, Hall DH, Barr MM. Extracellular matrix regulates morphogenesis and function of ciliated sensory organs in C. elegans. bioRxiv. 2018 Jul. https://doi.org/10.1101/376152 (walsh2022trackingnand pages 20-21)
- Maguire JE. Myristoylated CIL-7 is required for polycystin associated behaviors and extracellular vesicle biogenesis in C. elegans. Thesis/Preprint. 2015 Jan. https://doi.org/10.7282/t3cr5w7w (maguire2015myristoylatedcil7is pages 13-17)

Compliance with identity verification
- The gene symbol โ€œlov-1โ€ in C. elegans matches UniProt Q09624, described as a polycystin-1 homolog bearing GAIN/GPS and PLAT/LH2 domains and a multi-pass C-terminal region; all cited C. elegans literature refers to LOV-1 (pkd-1) as the PC1 homolog and maps these domains and functions accordingly (Dec 2022; PLOS Genetics: https://doi.org/10.1371/journal.pgen.1010560) (walsh2022trackingnand pages 1-2, walsh2022trackingnand pages 4-6).

References

  1. (walsh2022trackingnand pages 1-2): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  2. (walsh2022trackingnand pages 4-6): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  3. (walsh2022trackingnand pages 6-8): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  4. (maguire2015myristoylatedcil7is pages 13-17): Julie Elizabeth Maguire. Myristoylated cil-7 is required for polycystin associated behaviors and extracellular vesicle biogenesis in c. elegans. ArXiv, Jan 2015. URL: https://doi.org/10.7282/t3cr5w7w, doi:10.7282/t3cr5w7w. This article has 0 citations.

  5. (walsh2022trackingnand pages 2-4): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  6. (walsh2022trackingnand pages 8-12): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  7. (nikonorova2025polycystinsrecruitcargo pages 1-2): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  8. (nikonorova2025polycystinsrecruitcargo pages 9-10): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  9. (nikonorova2025polycystinsrecruitcargo pages 7-8): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  10. (nikonorova2025polycystinsrecruitcargo pages 5-6): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  11. (nikonorova2025polycystinsrecruitcargo pages 10-11): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  12. (nikonorova2025polycystinsrecruitcargo pages 8-9): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

  13. (walsh2022trackingnand pages 20-21): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  14. (walsh2022trackingnand pages 12-14): Jonathon D. Walsh, Juan Wang, Molly DeHart, Inna A. Nikonorova, Jagan Srinivasan, and Maureen M. Barr. Tracking n- and c-termini of c. elegans polycystin-1 reveals their distinct targeting requirements and functions in cilia and extracellular vesicles. PLOS Genetics, 18:e1010560, Dec 2022. URL: https://doi.org/10.1371/journal.pgen.1010560, doi:10.1371/journal.pgen.1010560. This article has 11 citations and is from a domain leading peer-reviewed journal.

  15. (nikonorova2025polycystinsrecruitcargo pages 13-14): Inna A. Nikonorova, Elizabeth desRanleau, Katherine C. Jacobs, Josh Saul, Jonathon D. Walsh, Juan Wang, and Maureen M. Barr. Polycystins recruit cargo to distinct ciliary extracellular vesicle subtypes in c. elegans. Nature Communications, Apr 2025. URL: https://doi.org/10.1038/s41467-025-57512-3, doi:10.1038/s41467-025-57512-3. This article has 5 citations and is from a highest quality peer-reviewed journal.

Citations

  1. walsh2022trackingnand pages 20-21
  2. walsh2022trackingnand pages 6-8
  3. walsh2022trackingnand pages 8-12
  4. walsh2022trackingnand pages 4-6
  5. nikonorova2025polycystinsrecruitcargo pages 8-9
  6. walsh2022trackingnand pages 2-4
  7. walsh2022trackingnand pages 12-14
  8. walsh2022trackingnand pages 1-2
  9. nikonorova2025polycystinsrecruitcargo pages 7-8
  10. nikonorova2025polycystinsrecruitcargo pages 1-2
  11. nikonorova2025polycystinsrecruitcargo pages 9-10
  12. nikonorova2025polycystinsrecruitcargo pages 5-6
  13. nikonorova2025polycystinsrecruitcargo pages 10-11
  14. nikonorova2025polycystinsrecruitcargo pages 13-14
  15. https://doi.org/10.1371/journal.pgen.1010560
  16. https://doi.org/10.1038/s41467-025-57512-3
  17. https://doi.org/10.1371/journal.pgen.1010560;
  18. https://doi.org/10.7554/elife.67670;
  19. https://doi.org/10.1101/2021.02.14.430969
  20. https://doi.org/10.1101/376152
  21. https://doi.org/10.1038/s41467-025-57512-3;
  22. https://doi.org/10.1101/376152;
  23. https://doi.org/10.7554/eLife.67670
  24. https://doi.org/10.7554/elife.67670
  25. https://doi.org/10.7282/t3cr5w7w
  26. https://doi.org/10.1371/journal.pgen.1010560,
  27. https://doi.org/10.7282/t3cr5w7w,
  28. https://doi.org/10.1038/s41467-025-57512-3,

๐Ÿ“„ View Raw YAML

id: Q09624
gene_symbol: lov-1
product_type: PROTEIN
status: COMPLETE
taxon:
  id: NCBITaxon:6239
  label: Caenorhabditis elegans
description: LOV-1 (Location Of Vulva defective 1) is the C. elegans ortholog of
  human PKD1/Polycystin-1. It is a large membrane protein with multiple 
  transmembrane domains, a PLAT domain, and a GPS autoproteolytic cleavage site.
  LOV-1 functions as part of a mechanosensory receptor complex with PKD-2 (the 
  C. elegans TRPP2/Polycystin-2 ortholog) in male-specific sensory neurons. This
  complex is required for male mating behaviors, specifically response to 
  hermaphrodite contact and vulva location. LOV-1 localizes to sensory cilia in 
  ray neurons, hook neurons, and cephalic (CEM) neurons of adult males. The 
  protein interacts with ATP-2 (F1-ATP synthase beta subunit) via its PLAT 
  domain, with casein kinase II regulatory subunit KIN-10, and with STAM-1 for 
  endosomal trafficking. LOV-1 and PKD-2 act in the same genetic pathway, as 
  double mutants show no enhancement over single mutants.
existing_annotations:
  - term:
      id: GO:0016020
      label: membrane
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: LOV-1 is a multi-pass transmembrane protein with 11 predicted 
        transmembrane helices according to UniProt. The membrane annotation is 
        well-supported by phylogenetic inference across polycystin family 
        members.
      action: ACCEPT
      reason: LOV-1 is clearly a membrane protein based on its domain 
        architecture (multiple TM domains, GPS region, PLAT domain). UniProt 
        annotation indicates "Multi-pass membrane protein" and the IBA 
        annotation is consistent with polycystin family conservation.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: lov-1 encodes a putative membrane protein with a 
            mucin-like, serine-threonine-rich amino terminus followed by two 
            blocks of homology to human polycystins
        - reference_id: file:worm/lov-1/lov-1-deep-research-falcon.md
          supporting_text: 'model: Edison Scientific Literature'
  - term:
      id: GO:0005262
      label: calcium channel activity
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: The IBA annotation infers calcium channel activity based on 
        polycystin family membership. In mammals, polycystin-1 and polycystin-2 
        form a mechanosensitive cation channel. However, direct evidence for 
        LOV-1 having intrinsic calcium channel activity is limited; rather, 
        LOV-1 appears to function as a receptor that partners with the TRP 
        channel PKD-2.
      action: MODIFY
      reason: LOV-1 is a PC1-family member that partners with the TRPP channel 
        PKD-2. The channel activity likely resides primarily in PKD-2, while 
        LOV-1 functions as a receptor component of the complex. A more accurate 
        annotation would be "calcium channel regulator activity" or simply 
        retain the broader "cation channel activity" annotation if the complex 
        is considered a functional unit. However, given the IBA evidence across 
        the polycystin family, this annotation is not entirely wrong but may be 
        an over-annotation for LOV-1 specifically.
      proposed_replacement_terms:
        - id: GO:0015276
          label: ligand-gated ion channel activity
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: It has recently been demonstrated that polycystin-1 
            and polycystin-2 (encoded by PKD1 and PKD2, respectively) assemble 
            to form a cation channel in vitro
  - term:
      id: GO:0050982
      label: detection of mechanical stimulus
    evidence_type: IBA
    original_reference_id: GO_REF:0000033
    review:
      summary: LOV-1 functions as a mechanosensory receptor in male-specific 
        sensory neurons. The LOV-1/PKD-2 complex detects contact with the 
        hermaphrodite during mating. This annotation is well-supported by 
        phylogenetic inference and functional studies.
      action: ACCEPT
      reason: LOV-1 is required for response to hermaphrodite contact during 
        male mating, which is a mechanosensory behavior. The polycystin complex 
        (PC1/PC2) functions as a mechanosensor in both mammals and C. elegans. 
        The IBA annotation is appropriate.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: 'lov-1 (for location of vulva), that is required for two
            male sensory behaviours: response and vulva location'
        - reference_id: PMID:12411744
          supporting_text: Based on the role of polycystins in C. elegans 
            sensory neuron function and the conservation of PKD pathways we 
            suggest that polycystins act as sensors of the extracellular 
            environment
  - term:
      id: GO:0005929
      label: cilium
    evidence_type: IEA
    original_reference_id: GO_REF:0000044
    review:
      summary: LOV-1 localizes to sensory cilia in male-specific neurons. This 
        is well-documented by multiple publications using GFP fusion proteins.
      action: ACCEPT
      reason: The IEA annotation based on UniProt subcellular location is 
        correct and supported by experimental evidence (IDA annotations with 
        same GO term exist). LOV-1::GFP localizes to cilia and ciliary base.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: LOV-1::GFP and PKD-2::GFP are expressed in the same 
            male-specific sensory neurons and are concentrated in cilia and cell
            bodies
  - term:
      id: GO:0016020
      label: membrane
    evidence_type: IEA
    original_reference_id: GO_REF:0000044
    review:
      summary: Duplicate membrane annotation from UniProt subcellular location 
        mapping. LOV-1 is a multi-pass transmembrane protein.
      action: ACCEPT
      reason: This is a valid annotation. LOV-1 has 11 predicted transmembrane 
        helices and is clearly membrane-localized. Duplicate annotations with 
        different evidence codes are acceptable.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: lov-1 encodes a putative membrane protein
  - term:
      id: GO:0070588
      label: calcium ion transmembrane transport
    evidence_type: IEA
    original_reference_id: GO_REF:0000108
    review:
      summary: This annotation is inferred from the calcium channel activity 
        annotation. Since the calcium channel activity annotation is 
        questionable for LOV-1 specifically (channel activity may reside 
        primarily in PKD-2), this inferred annotation is similarly uncertain.
      action: MODIFY
      reason: LOV-1 is part of a receptor-channel complex with PKD-2. The 
        transport activity is more directly attributable to PKD-2. LOV-1's role 
        is as a receptor/regulatory component. This annotation follows from the 
        MF annotation which may be an over-annotation.
      proposed_replacement_terms:
        - id: GO:0010959
          label: regulation of metal ion transport
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: polycystin-1 and polycystin-2 (encoded by PKD1 and 
            PKD2, respectively) assemble to form a cation channel in vitro
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:15563610
    review:
      summary: LOV-1 physically interacts with ATP-2 (F1-ATP synthase beta 
        subunit) via its PLAT domain. This interaction is documented in 
        PMID:15563610.
      action: MODIFY
      reason: The generic "protein binding" annotation is uninformative. LOV-1 
        interacts with ATP-2 via its PLAT domain, which should be captured with 
        a more specific term. The annotation should be replaced with "protein 
        domain specific binding" which better reflects the documented PLAT 
        domain-mediated interaction.
      proposed_replacement_terms:
        - id: GO:0019904
          label: protein domain specific binding
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: ATP-2, the beta subunit of the ATP synthase, 
            physically associates with the LOV-1 PLAT domain and that this 
            interaction is evolutionarily conserved
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:16481400
    review:
      summary: LOV-1 interacts with KIN-10, the regulatory subunit of casein 
        kinase II. This interaction was identified in a yeast two-hybrid screen 
        and validated.
      action: MODIFY
      reason: Generic "protein binding" is uninformative. The interaction with 
        KIN-10 (casein kinase II regulatory subunit) is through the LOV-1 
        C-terminus. A more specific term would be preferable.
      proposed_replacement_terms:
        - id: GO:0019904
          label: protein domain specific binding
      supported_by:
        - reference_id: PMID:16481400
          supporting_text: We identified the regulatory subunit of the 
            serine-threonine casein kinase II (CK2) as a binding partner of 
            LOV-1 and human PC-1
  - term:
      id: GO:0071683
      label: sensory dendrite
    evidence_type: NAS
    original_reference_id: PMID:11553327
    review:
      summary: LOV-1 localizes to sensory structures of male-specific neurons. 
        The neurons expressing LOV-1 have ciliated sensory endings. This 
        annotation captures localization to the sensory process.
      action: ACCEPT
      reason: LOV-1::GFP is concentrated in the sensory endings of ray, hook, 
        and CEM neurons. These sensory neurons have ciliated dendrites. The NAS 
        annotation is appropriate based on the published expression pattern.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: LOV-1::GFP and PKD-2::GFP are expressed in the same 
            male-specific sensory neurons and are concentrated in cilia and cell
            bodies
  - term:
      id: GO:1902435
      label: regulation of male mating behavior
    evidence_type: NAS
    original_reference_id: PMID:10517638
    review:
      summary: LOV-1 is required for male mating behavior. Loss of lov-1 
        function results in defects in response to hermaphrodite contact and 
        vulva location during mating.
      action: ACCEPT
      reason: This accurately describes LOV-1 function. The gene was identified 
        based on male mating defects and is named for the vulva location defect.
        LOV-1 is required for proper execution of male mating behavior.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: 'Here we identify a gene, lov-1 (for location of vulva),
            that is required for two male sensory behaviours: response and vulva location'
  - term:
      id: GO:0019904
      label: protein domain specific binding
    evidence_type: IPI
    original_reference_id: PMID:17581863
    review:
      summary: LOV-1 interacts with STAM-1A (signal transduction adaptor 
        molecule) via its C-terminus. This interaction is involved in endosomal 
        trafficking and degradation of the LOV-1/PKD-2 complex.
      action: ACCEPT
      reason: The protein domain specific binding annotation is appropriate for 
        this interaction. LOV-1 C-terminus interacts with STAM-1A C-terminus, 
        representing a domain-specific interaction.
      supported_by:
        - reference_id: PMID:17581863
          supporting_text: signal transduction adaptor molecule STAM-1A 
            interacts with C. elegans LOV-1 (PC1), and that STAM functions with 
            hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs) 
            on early endosomes to direct the LOV-1-PKD-2 complex for lysosomal 
            degradation
  - term:
      id: GO:0034606
      label: response to hermaphrodite contact
    evidence_type: IMP
    original_reference_id: PMID:10517638
    review:
      summary: lov-1 mutant males are defective in response behavior - the 
        initial sensory response when males contact a hermaphrodite. This is one
        of the two core behavioral phenotypes of lov-1 mutants.
      action: ACCEPT
      reason: This is a core function of LOV-1. The original paper identified 
        lov-1 mutants based on defects in response and vulva location behaviors.
        This annotation is well-supported by mutant phenotype analysis.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: 'lov-1 (for location of vulva), that is required for two
            male sensory behaviours: response and vulva location'
  - term:
      id: GO:0034606
      label: response to hermaphrodite contact
    evidence_type: IMP
    original_reference_id: PMID:11553327
    review:
      summary: Confirms the response behavior defect in lov-1 mutants and 
        demonstrates that lov-1 and pkd-2 act in the same pathway.
      action: ACCEPT
      reason: This annotation provides additional evidence for LOV-1 function in
        response behavior, demonstrating the phenotype is consistent across 
        studies.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: Mutations in either lov-1 or pkd-2 result in 
            identical male sensory behavioral defects. Also, pkd-2;lov-1 double 
            mutants are no more severe than either of the single mutants, 
            indicating that lov-1 and pkd-2 act together.
  - term:
      id: GO:0034606
      label: response to hermaphrodite contact
    evidence_type: IMP
    original_reference_id: PMID:12411744
    review:
      summary: Confirms response behavior defects in lov-1 mutants in the 
        context of polycystin functional studies.
      action: ACCEPT
      reason: Additional confirmation of LOV-1 role in response behavior from an
        independent study.
      supported_by:
        - reference_id: PMID:12411744
          supporting_text: Mutation analysis in C. elegans showed similarly 
            compromised male mating behaviors in all single and double lov-1 and
            pkd-2 mutants
  - term:
      id: GO:0034606
      label: response to hermaphrodite contact
    evidence_type: IMP
    original_reference_id: PMID:15563610
    review:
      summary: Demonstrates that ATP-2 and LOV-1 act in the same pathway for 
        response behavior.
      action: ACCEPT
      reason: Confirms LOV-1 role in response behavior and extends understanding
        of the pathway to include ATP-2 as a signaling component.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: atp-2, lov-1, and pkd-2 act in the same molecular 
            pathway
  - term:
      id: GO:0034608
      label: vulval location
    evidence_type: IMP
    original_reference_id: PMID:10517638
    review:
      summary: lov-1 mutant males are defective in vulva location - the behavior
        where males scan the hermaphrodite body to locate the vulva for spicule 
        insertion. This is the phenotype for which the gene is named.
      action: ACCEPT
      reason: This is a core function of LOV-1 and the basis for the gene name 
        (Location Of Vulva). Well-supported by mutant analysis in the original 
        paper.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: 'Here we identify a gene, lov-1 (for location of vulva),
            that is required for two male sensory behaviours: response and vulva location'
  - term:
      id: GO:0034608
      label: vulval location
    evidence_type: IMP
    original_reference_id: PMID:11553327
    review:
      summary: Confirms vulva location defect in lov-1 mutants and shows lov-1 
        and pkd-2 act together.
      action: ACCEPT
      reason: Confirms the vulva location phenotype and demonstrates genetic 
        pathway relationship with pkd-2.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: Mutations in either lov-1 or pkd-2 result in 
            identical male sensory behavioral defects
  - term:
      id: GO:0034608
      label: vulval location
    evidence_type: IMP
    original_reference_id: PMID:12411744
    review:
      summary: Confirms vulva location phenotype in context of polycystin 
        function studies.
      action: ACCEPT
      reason: Additional confirmation of vulva location phenotype from 
        independent study.
      supported_by:
        - reference_id: PMID:12411744
          supporting_text: Mutation analysis in C. elegans showed similarly 
            compromised male mating behaviors in all single and double lov-1 and
            pkd-2 mutants
  - term:
      id: GO:0034608
      label: vulval location
    evidence_type: IMP
    original_reference_id: PMID:15563610
    review:
      summary: Demonstrates vulva location defects and ATP-2 pathway 
        involvement.
      action: ACCEPT
      reason: Confirms vulva location phenotype and extends pathway 
        understanding.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: atp-2, lov-1, and pkd-2 act in the same molecular 
            pathway
  - term:
      id: GO:0005515
      label: protein binding
    evidence_type: IPI
    original_reference_id: PMID:17581863
    review:
      summary: Duplicate annotation for protein binding with STAM-1. This 
        appears to be redundant with the protein domain specific binding 
        annotation.
      action: MODIFY
      reason: This is a less informative duplicate of the protein domain 
        specific binding annotation (GO:0019904) from the same reference. The 
        interaction with STAM-1A is domain-specific and should be annotated with
        the more informative term.
      proposed_replacement_terms:
        - id: GO:0019904
          label: protein domain specific binding
      supported_by:
        - reference_id: PMID:17581863
          supporting_text: signal transduction adaptor molecule STAM-1A 
            interacts with C. elegans LOV-1 (PC1)
  - term:
      id: GO:0005929
      label: cilium
    evidence_type: IDA
    original_reference_id: PMID:15563610
    review:
      summary: LOV-1 localizes to cilia in male-specific sensory neurons, 
        demonstrated by GFP fusion protein imaging.
      action: ACCEPT
      reason: Direct observation of LOV-1::GFP localization to cilia. 
        Well-supported experimental evidence.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: The C. elegans polycystins LOV-1 and PKD-2 are 
            required for male mating behaviors and are localized to sensory 
            cilia
  - term:
      id: GO:0060179
      label: male mating behavior
    evidence_type: IMP
    original_reference_id: PMID:15563610
    review:
      summary: lov-1 mutants show defects in male mating behavior, specifically 
        in response and vulva location steps.
      action: ACCEPT
      reason: This is a core function of LOV-1. The gene is required for proper 
        male mating behavior.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: Disrupting the function of the ATP synthase or 
            overexpression of atp-2 results in a male mating behavior defect
  - term:
      id: GO:0097730
      label: non-motile cilium
    evidence_type: IDA
    original_reference_id: PMID:10517638
    review:
      summary: LOV-1 is expressed in sensory neurons with non-motile (primary) 
        cilia. The ray, hook, and CEM neurons have sensory cilia that do not 
        beat.
      action: ACCEPT
      reason: The sensory cilia of C. elegans sensory neurons are non-motile 
        cilia. LOV-1 localizes to these structures.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: lov-1 is expressed in adult males in sensory neurons 
            of the rays, hook and head
  - term:
      id: GO:0097730
      label: non-motile cilium
    evidence_type: IDA
    original_reference_id: PMID:17581863
    review:
      summary: Confirms LOV-1 localization to non-motile cilia with additional 
        detail about ciliary base localization.
      action: ACCEPT
      reason: Additional evidence for ciliary localization showing both cilium 
        proper and ciliary base localization.
      supported_by:
        - reference_id: PMID:17581863
          supporting_text: In a stam-1 mutant, both LOV-1 and PKD-2 improperly 
            accumulate at the ciliary base
  - term:
      id: GO:0007617
      label: mating behavior
    evidence_type: IMP
    original_reference_id: PMID:10517638
    review:
      summary: lov-1 mutants are defective in mating behavior. This is a broader
        term than "male mating behavior" but accurately describes the phenotype.
      action: ACCEPT
      reason: LOV-1 is required for mating behavior. This broader term 
        encompasses the specific defects in response and vulva location.
      supported_by:
        - reference_id: PMID:10517638
          supporting_text: lov-1 (for location of vulva), that is required for 
            two male sensory behaviours
  - term:
      id: GO:0007617
      label: mating behavior
    evidence_type: IMP
    original_reference_id: PMID:11553327
    review:
      summary: Confirms mating behavior defects in lov-1 mutants.
      action: ACCEPT
      reason: Additional evidence for mating behavior requirement.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: Mutations in either lov-1 or pkd-2 result in 
            identical male sensory behavioral defects
  - term:
      id: GO:0007617
      label: mating behavior
    evidence_type: IGI
    original_reference_id: PMID:11553327
    review:
      summary: The IGI annotation based on genetic interaction with pkd-2 
        supports the mating behavior annotation. Double mutants are no more 
        severe than single mutants.
      action: ACCEPT
      reason: The genetic interaction evidence shows lov-1 and pkd-2 act in the 
        same pathway for mating behavior.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: pkd-2;lov-1 double mutants are no more severe than 
            either of the single mutants, indicating that lov-1 and pkd-2 act 
            together
  - term:
      id: GO:0043025
      label: neuronal cell body
    evidence_type: IDA
    original_reference_id: PMID:10517638
    review:
      summary: LOV-1::GFP is observed in cell bodies of male-specific neurons in
        addition to cilia.
      action: ACCEPT
      reason: LOV-1 is expressed in and localizes to neuronal cell bodies, as 
        demonstrated by GFP fusion imaging.
      supported_by:
        - reference_id: PMID:11553327
          supporting_text: LOV-1::GFP and PKD-2::GFP are expressed in the same 
            male-specific sensory neurons and are concentrated in cilia and cell
            bodies
  - term:
      id: GO:0007617
      label: mating behavior
    evidence_type: IMP
    original_reference_id: PMID:15563610
    review:
      summary: Confirms mating behavior defects and extends to ATP-2 pathway.
      action: ACCEPT
      reason: Additional evidence for mating behavior requirement.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: Disrupting the function of the ATP synthase or 
            overexpression of atp-2 results in a male mating behavior defect
  - term:
      id: GO:0019904
      label: protein domain specific binding
    evidence_type: IPI
    original_reference_id: PMID:15563610
    review:
      summary: LOV-1 PLAT domain interacts with ATP-2 N-terminus. This is a 
        well-characterized domain-specific interaction.
      action: ACCEPT
      reason: The interaction between LOV-1 PLAT domain and ATP-2 is specific 
        and evolutionarily conserved. Appropriate annotation.
      supported_by:
        - reference_id: PMID:15563610
          supporting_text: ATP-2, the beta subunit of the ATP synthase, 
            physically associates with the LOV-1 PLAT domain and that this 
            interaction is evolutionarily conserved
references:
  - id: GO_REF:0000033
    title: Annotation inferences using phylogenetic trees
    findings: []
  - id: GO_REF:0000044
    title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular 
      Location vocabulary mapping, accompanied by conservative changes to GO 
      terms applied by UniProt
    findings: []
  - id: GO_REF:0000108
    title: Automatic assignment of GO terms using logical inference, based on on
      inter-ontology links
    findings: []
  - id: PMID:10517638
    title: A polycystic kidney-disease gene homologue required for male mating 
      behaviour in C. elegans.
    findings:
      - statement: lov-1 was identified as a gene required for male mating 
          behavior, specifically response to hermaphrodite contact and vulva 
          location.
        supporting_text: 'Here we identify a gene, lov-1 (for location of vulva),
          that is required for two male sensory behaviours: response and vulva location.'
      - statement: 'LOV-1 is expressed in male-specific sensory neurons: ray neurons,
          hook neurons, and head cephalic (CEM) neurons.'
        supporting_text: lov-1 is expressed in adult males in sensory neurons of
          the rays, hook and head
      - statement: LOV-1 is homologous to human PKD1 polycystin.
        supporting_text: LOV-1 is the closest C. elegans homologue of PKD1
  - id: PMID:11553327
    title: The Caenorhabditis elegans autosomal dominant polycystic kidney 
      disease gene homologs lov-1 and pkd-2 act in the same pathway.
    findings:
      - statement: lov-1 and pkd-2 act in the same genetic pathway for mating 
          behavior.
        supporting_text: pkd-2;lov-1 double mutants are no more severe than 
          either of the single mutants, indicating that lov-1 and pkd-2 act 
          together
      - statement: LOV-1::GFP and PKD-2::GFP colocalize in cilia and cell bodies
          of male-specific neurons.
        supporting_text: LOV-1::GFP and PKD-2::GFP are expressed in the same 
          male-specific sensory neurons and are concentrated in cilia and cell 
          bodies
      - statement: lov-1 is not required for cilia structure.
        supporting_text: the cilia of lov-1 and pkd-2 single mutants and of 
          lov-1;pkd-2 double mutants are normal as judged by electron microscopy
  - id: PMID:12411744
    title: Towards understanding the polycystins.
    findings:
      - statement: LOV-1 and PKD-2 localize to sensory neuron endings and may 
          function as mechanosensors or chemosensors.
        supporting_text: Expression analysis localized LOV-1 and PKD-2 to the 
          ends of sensory neurons in male tails and to the tips of CEM neurons 
          in the head, consistent with functions as chemo- or mechanosensors
  - id: PMID:15563610
    title: ATP-2 interacts with the PLAT domain of LOV-1 and is involved in 
      Caenorhabditis elegans polycystin signaling.
    findings:
      - statement: ATP-2 physically interacts with LOV-1 PLAT domain and this 
          interaction is conserved.
        supporting_text: ATP-2, the beta subunit of the ATP synthase, physically
          associates with the LOV-1 PLAT domain and that this interaction is 
          evolutionarily conserved
      - statement: ATP-2, LOV-1, and PKD-2 act in the same signaling pathway.
        supporting_text: atp-2, lov-1, and pkd-2 act in the same molecular 
          pathway
      - statement: ATP synthase components colocalize with LOV-1 and PKD-2 in 
          cilia.
        supporting_text: ATP-2 and other ATP synthase components colocalize with
          LOV-1 and PKD-2 in cilia
  - id: PMID:16481400
    title: Casein kinase II and calcineurin modulate TRPP function and ciliary 
      localization.
    findings:
      - statement: CK2 regulatory subunit (KIN-10) binds LOV-1 and modulates 
          PKD-2 ciliary localization.
        supporting_text: We identified the regulatory subunit of the 
          serine-threonine casein kinase II (CK2) as a binding partner of LOV-1 
          and human PC-1
      - statement: Phosphorylation regulates PKD-2 ciliary localization.
        supporting_text: A dynamic phosphorylation-dephosphorylation cycle may 
          represent a mechanism for modulating TRPP activity, cellular 
          sensation, and ciliary protein localization
  - id: PMID:17581863
    title: STAM and Hrs down-regulate ciliary TRP receptors.
    findings:
      - statement: STAM-1A interacts with LOV-1 and directs LOV-1/PKD-2 for 
          lysosomal degradation.
        supporting_text: signal transduction adaptor molecule STAM-1A interacts 
          with C. elegans LOV-1 (PC1), and that STAM functions with hepatocyte 
          growth factor-regulated tyrosine kinase substrate (Hrs) on early 
          endosomes to direct the LOV-1-PKD-2 complex for lysosomal degradation
      - statement: LOV-1 localizes to both ciliary base and cilium proper.
        supporting_text: In a stam-1 mutant, both LOV-1 and PKD-2 improperly 
          accumulate at the ciliary base
  - id: file:worm/lov-1/lov-1-deep-research-falcon.md
    title: Deep research report on lov-1
    findings: []
core_functions:
  - description: LOV-1 functions as a mechanosensory receptor in male sensory 
      cilia, forming a complex with PKD-2 (TRPP2/Polycystin-2) to detect 
      mechanical stimuli during male mating behavior. LOV-1 acts as the receptor
      component that partners with the ion channel PKD-2.
    molecular_function:
      id: GO:0019904
      label: protein domain specific binding
    directly_involved_in:
      - id: GO:0034606
        label: response to hermaphrodite contact
      - id: GO:0034608
        label: vulval location
      - id: GO:0060179
        label: male mating behavior
    locations:
      - id: GO:0097730
        label: non-motile cilium
      - id: GO:0016020
        label: membrane
    supported_by:
      - reference_id: PMID:10517638
        supporting_text: 'Here we identify a gene, lov-1 (for location of vulva),
          that is required for two male sensory behaviours: response and vulva location'
      - reference_id: PMID:11553327
        supporting_text: LOV-1::GFP and PKD-2::GFP are expressed in the same 
          male-specific sensory neurons and are concentrated in cilia and cell 
          bodies
  - description: LOV-1 PLAT domain mediates interactions with signaling partners
      ATP-2 (ATP synthase beta subunit), KIN-10 (CK2 regulatory subunit), and 
      STAM-1 (endosomal adaptor) for signal transduction and receptor 
      trafficking.
    molecular_function:
      id: GO:0019904
      label: protein domain specific binding
    directly_involved_in:
      - id: GO:1902435
        label: regulation of male mating behavior
    locations:
      - id: GO:0043025
        label: neuronal cell body
    supported_by:
      - reference_id: PMID:15563610
        supporting_text: ATP-2, the beta subunit of the ATP synthase, physically
          associates with the LOV-1 PLAT domain and that this interaction is 
          evolutionarily conserved
      - reference_id: PMID:17581863
        supporting_text: signal transduction adaptor molecule STAM-1A interacts 
          with C. elegans LOV-1 (PC1)
tags:
  - caeel-ciliopathy