ARG2

UniProt ID: P40360
Organism: Saccharomyces cerevisiae S288C
Review Status: COMPLETE
πŸ“ Provide Detailed Feedback

Gene Description

N-acetylglutamate synthase (NAGS; amino-acid acetyltransferase, EC 2.3.1.1) of Saccharomyces cerevisiae, a mitochondrial matrix enzyme that acetylates L-glutamate with acetyl-CoA to form N-acetyl-L-glutamate, the first step of the acetylated (ornithine-producing) branch of arginine biosynthesis. Like other fungal NAGS it is unrelated in sequence to bacterial ArgA. Arg2 is active only in a stoichiometric complex (metabolon) with the acetylglutamate kinase domain of Arg5,6; complex formation is required for synthase activity and stability and couples arginine feedback inhibition of NAGS and NAGK, the two flux-controlling steps of the pathway. Arg2 provides the anaplerotic supply of N-acetylglutamate, which is otherwise recycled by ornithine acetyltransferase (Arg7). The kinase-associated domain is required for synthase activity, while the separate reductase product is dispensable for this support.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004042 L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor
EXP
PMID:391804
Regulation of activity and synthesis of N-acetylglutamate sy...
ACCEPT
Summary: N-acetylglutamate synthase activity measured in a particulate yeast fraction, including arginine feedback inhibition and regulation of enzyme synthesis.
Supporting Evidence:
PMID:391804
Feedback inhibition of N-acetylgutamate synthase in a particulate fraction from Saccharomyces cerevisiae by L-arginine
GO:0004042 L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor
IBA
GO_REF:0000033
ACCEPT
Summary: Acetyl-CoA-dependent N-acetylglutamate synthase activity; ARG2 itself is among the experimental descendants. Core function.
Supporting Evidence:
file:yeast/ARG2/ARG2-uniprot.txt
Reaction=L-glutamate + acetyl-CoA = N-acetyl-L-glutamate + CoA + H(+);
GO:0004042 L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor
IDA
PMID:11553611
A new yeast metabolon involving at least the two first enzym...
ACCEPT
Summary: Synthase activity assayed for ARG2 (YJL071W) and shown to depend on the Arg5,6 kinase. Core function.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
PMID:11553611
The results imply that the synthase must interact stoichiometrically in vivo with the kinase, the reductase, or both to be active.
GO:0004042 L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor
IEA
GO_REF:0000120
ACCEPT
Summary: Automated RHEA/InterPro assignment consistent with experiment. Core function.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis.
GO:0004042 L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor
IMP
PMID:11553611
A new yeast metabolon involving at least the two first enzym...
ACCEPT
Summary: Gene-dosage/mutant analysis shows ARG2 encodes the synthase activity.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0005739 mitochondrion
EXP
PMID:205532
Arginine metabolism in Saccharomyces cerevisiae: subcellular...
ACCEPT
Summary: ARG2 has supported mitochondrial localization; the matrix assertion is retained separately.
Reason: The fractionation study measured the acetylated ornithine-pathway enzyme activities in particulate fractions and compared their distribution with mitochondrial markers. This directly supports the organelle location. The root-organelle policy preserves mitochondrion as an informative claim. Matrix localization was checked and remains a separate annotation, with its own experimental or inference basis.
Supporting Evidence:
PMID:205532
These enzymes were exclusively particulate.
PMID:205532
suggested that these enzymes were associated with the mitochondria
GO:0005739 mitochondrion
IEA
GO_REF:0000044
ACCEPT
Summary: ARG2 has supported mitochondrial localization; the matrix assertion is retained separately.
Reason: The electronic compartment assignment agrees with the publication-linked curated target localization and existing experimental mitochondrial annotations. Its source stops at the organelle and is retained at that level. The root-organelle policy preserves mitochondrion as an informative claim. Matrix localization was checked and remains a separate annotation, with its own experimental or inference basis.
Supporting Evidence:
PMID:205532
These enzymes were exclusively particulate.
PMID:205532
suggested that these enzymes were associated with the mitochondria
GO:0005759 mitochondrial matrix
IBA
GO_REF:0000033
ACCEPT
Summary: Mitochondrial matrix location; consistent with fractionation data.
Supporting Evidence:
PMID:205532
These enzymes were exclusively particulate.
GO:0005759 mitochondrial matrix
IDA
PMID:205532
Arginine metabolism in Saccharomyces cerevisiae: subcellular...
ACCEPT
Summary: Fractionation associated acetylglutamate synthase with mitochondria; curator assigned the matrix compartment from the full text.
Supporting Evidence:
PMID:205532
suggested that these enzymes were associated with the mitochondria
GO:0005829 cytosol
RCA
GO_REF:0000123
REMOVE
Summary: YeastPathways-derived (GO_REF:0000123) location assigning activity to the cytosol. This enzyme of the acetylated (ornithine-producing) part of the yeast arginine pathway is a mitochondrial matrix protein, shown by subcellular fractionation and by the cleaved mitochondrial presequence; the cytosol term contradicts the experimental location data.
Reason: PMID:205532 explicitly included acetylglutamate synthase among the measured activities restricted to particulate fractions, distinguished from the soluble downstream arginine-pathway enzymes. This is direct biochemical compartment discrimination for the target activity, not rejection from a targeting peptide or absence of a cytosolic database entry. It supports rejecting the pathway-derived cytosolic assignment under the measured native conditions; it does not prove that no precursor molecule or minor conditional pool can ever occur outside mitochondria. Unlike ARG7, no target-specific pre-import autocatalysis is established in the inspected evidence.
Supporting Evidence:
PMID:205532
These enzymes were exclusively particulate.
PMID:205532
suggested that these enzymes were associated with the mitochondria
GO:0006526 L-arginine biosynthetic process
IBA
GO_REF:0000033
ACCEPT
Summary: First step of arginine biosynthesis. Core process.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0006526 L-arginine biosynthetic process
IDA
PMID:11553611
A new yeast metabolon involving at least the two first enzym...
ACCEPT
Summary: ARG2 identified as the structural gene for the first step of arginine biosynthesis.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0006526 L-arginine biosynthetic process
IEA
GO_REF:0000120
ACCEPT
Summary: Automated pathway assignment; correct.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0006526 L-arginine biosynthetic process
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways assignment; correct.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0006592 L-ornithine biosynthetic process
IBA
GO_REF:0000033
ACCEPT
Summary: N-acetylglutamate synthesis is the first step of the acetylated route that produces ornithine (the ornithine-producing segment of the arginine pathway).
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0006592 L-ornithine biosynthetic process
IMP
PMID:11553611
A new yeast metabolon involving at least the two first enzym...
ACCEPT
Summary: Mutant analysis places ARG2 in the ornithine-producing segment of the pathway.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
GO:0103045 L-methionine N-acyltransferase activity
RCA
GO_REF:0000123
MODIFY
Summary: The acetyl-cycle pathway assignment supports glutamate acetylation rather than a methionine-specific reaction.
Reason: The proximate source is SGD_PWY:ARGSYNBSUB-PWY, the arginine acetyl-cycle pathway. Its initiating acetyl-transfer step uses L-glutamate. Target-specific work establishes acetyl-CoA-dependent N-acetylglutamate synthesis; replace this methionine-acceptor assignment with the existing GO:0004042. This is a pathway/reaction-specificity correction, not a claim that all possible side-substrate activities have been experimentally excluded.
Supporting Evidence:
PMID:11553611
Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis.
GO:0106098 NAGS/NAGK complex
IPI
PMID:11553611
A new yeast metabolon involving at least the two first enzym...
ACCEPT
Summary: HA-tagged Arg2 co-immunoprecipitated the Arg5,6-derived kinase, and synthase activity requires stoichiometric complex formation. Core complex membership.
Supporting Evidence:
PMID:11553611
hemagglutinin-tagged synthase coprecipitated with a protein proven by microsequencing to be the kinase
PMID:11553611
The results imply that the synthase must interact stoichiometrically in vivo with the kinase, the reductase, or both to be active.

Core Functions

Acetyl-CoA-dependent acetylation of L-glutamate to N-acetyl-L-glutamate (EC 2.3.1.1), the first, arginine-feedback-inhibited step of arginine biosynthesis, carried out in the mitochondrial matrix as part of the NAGS/NAGK complex with Arg5,6.

Supporting Evidence:
  • PMID:11553611
    Open reading frame YJL071W of Saccharomyces cerevisiae was shown to be ARG2 and identified as the structural gene for acetylglutamate synthase, first step in arginine biosynthesis
  • PMID:11553611
    hemagglutinin-tagged synthase coprecipitated with a protein proven by microsequencing to be the kinase
  • PMID:391804
    Feedback inhibition of N-acetylgutamate synthase in a particulate fraction from Saccharomyces cerevisiae by L-arginine
  • PMID:12603335
    the reductase is dispensable for synthase activity and protein level.

References

Loading supporting content…

Download this section (compressed HTML)

Deep Research

SGD

(ARG2-deep-research-sgd.md)
SGD gene description for ARG2 (yeast) SGD

SGD gene description for ARG2 (yeast)

Acetylglutamate synthase (glutamate N-acetyltransferase); mitochondrial enzyme that catalyzes the first step in the biosynthesis of the arginine precursor ornithine; forms a complex with Arg5,6p

πŸ“š Additional Documentation

Notes

(ARG2-notes.md)

Loading supporting content…

Download this section (compressed HTML)

πŸ“„ View Raw YAML

Loading supporting content…

Download this section (compressed HTML)