FUS3

UniProt ID: P16892
Organism: Saccharomyces cerevisiae S288C
Review Status: COMPLETE
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Gene Description

Fus3 (YBL016W) is the mating-pheromone-response mitogen-activated protein kinase of Saccharomyces cerevisiae, a CMGC-family Ser/Thr kinase that forms the MAPK tier of the Ste11 (MAPKKK) -> Ste7 (MAPKK) -> Fus3 cascade assembled on the Ste5 scaffold. Pheromone binding to the Ste2/Ste3 receptors releases Gbetagamma, which recruits Ste5 to the plasma membrane; there Ste7 dually phosphorylates Fus3 on Thr180 and Tyr182 of its TEY activation loop, a reaction that Ste5 specifically unlocks, making Fus3 activation selective for the mating pathway. Active Fus3 forms a gradient from the tip of the mating projection and shuttles into the nucleus. It phosphorylates the Ste12 repressors Dig1/Dig2 and Ste12 to induce mating genes, the CDK inhibitor Far1 to impose G1 arrest, Fus2 to promote its nuclear export before cell fusion, and the filamentation transcription factor Tec1, triggering its SCF-dependent degradation. Through Tec1 destruction and restraint of Kss1 activation, Fus3 insulates the mating response from the filamentous/invasive growth pathway, and it provides negative feedback on the cascade through phosphorylation of Ste5. Fus3 also restrains Ty1 retrotransposition. Its paralog Kss1 can partially substitute for Fus3 in mating-gene induction but mainly drives filamentous growth. Other Fus3 substrates include the formin Bni1, whose Fus3-dependent phosphorylation and localisation promote polarisation of the mating projection and cell fusion, and the RGS protein Sst2, whose pheromone-induced phosphorylation on Ser539 slows its degradation as part of feedback on G-protein signalling.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000749 response to pheromone triggering conjugation with cellular fusion
IDA
PMID:15620357
Pheromone-dependent destruction of the Tec1 transcription fa...
ACCEPT
Summary: Bao et al. showed pheromone signalling induces Fus3-dependent, kinase-activity-dependent degradation of Tec1; Fus3 is the mating-specific MAPK of the pheromone response.
Reason: Fus3 is the terminal kinase of the pheromone response pathway and directly executes pheromone-triggered outputs (Ste12/Dig1/Dig2 regulation, Far1-mediated G1 arrest, Tec1 destruction, Fus2 export). Annotation to the response-to-pheromone process is correct and core.
Supporting Evidence:
PMID:15620357
active Fus3 phosphorylates Tec1 on T273 in vitro
PMID:15620357
The mating-specific MAPK, Fus3, prevents crosstalk between the two pathways by unknown mechanisms
PMID:8334305
These data support a model in which FUS3 mediates transcription and G1 arrest by direct activation of STE12 and FAR1
GO:0000749 response to pheromone triggering conjugation with cellular fusion
IEA
GO_REF:0000117
ACCEPT
Summary: ARBA machine-learning IEA for response to pheromone triggering conjugation with cellular fusion.
Reason: Consistent with extensive experimental evidence that Fus3 is the mating pheromone MAPK (PMID:8334305, PMID:15620357).
Supporting Evidence:
PMID:8334305
These data support a model in which FUS3 mediates transcription and G1 arrest by direct activation of STE12 and FAR1
file:yeast/FUS3/FUS3-uniprot.txt
FUS3 phosphorylates STE7, STE5, FAR1, DIG1, DIG2 and STE12
file:yeast/FUS3/FUS3-deep-research-falcon.md
Its primary function is to convert pheromone-receptor activation into coordinated phosphorylation of nuclear, cytoplasmic, and cortical proteins.
GO:0001403 invasive growth in response to glucose limitation
IEA
GO_REF:0000117
MODIFY
Summary: ARBA IEA assigning invasive growth in response to glucose limitation, presumably propagated from the Fus3/Kss1 group.
Reason: Fus3 does not drive haploid invasive growth; it restrains it. Fus3 kinase activity blocks cross-activation of invasive-growth gene expression by the pheromone cascade (PMID:10652102), and Fus3 phosphorylates Tec1 to trigger its pheromone-induced destruction, so fus3 deletion causes erroneous invasive growth (PMID:15620357). The mutant phenotype is therefore evidence for negative regulation, and the positive process term misrepresents the direction of Fus3's role. The appropriate term is GO:2000218 negative regulation of invasive growth in response to glucose limitation (the same replacement is used for the paralog KSS1 review's repressive role).
Propagation Review
Root cause: PROPAGATION BAD
Failure modes: REGULATORY SIGN INVERSION WRONG ORTHOLOG OR PARALOG
Sources checked:
ARBA:ARBA00090378 SUPPORTS SOURCE BUT NOT TARGET
The ARBA positive invasive-growth transfer follows Kss1-like filamentation biology; Fus3 phosphorylates Tec1 and limits Kss1/crosstalk, so the supported FUS3 process is negative regulation.
Supporting Evidence:
PMID:10652102
Fus3 also inhibits haploid invasive growth by blocking cross-activation of invasive growth gene expression by the pheromone response signal cascade
PMID:15620357
deletion of FUS3, or deletion of DIA2 results in a loss of signaling specificity such that pheromone pathway signaling erroneously activates filamentation pathway gene expression and invasive growth
GO:0001403 invasive growth in response to glucose limitation
IMP
PMID:10652102
Fus3 controls Ty1 transpositional dormancy through the invas...
MODIFY
Summary: Conte and Curcio showed that Fus3 kinase activity and dosage inhibit haploid invasive growth; fus3-K42R fails to inhibit invasive growth.
Reason: Fus3 does not drive haploid invasive growth; it restrains it. Fus3 kinase activity blocks cross-activation of invasive-growth gene expression by the pheromone cascade (PMID:10652102), and Fus3 phosphorylates Tec1 to trigger its pheromone-induced destruction, so fus3 deletion causes erroneous invasive growth (PMID:15620357). The mutant phenotype is therefore evidence for negative regulation, and the positive process term misrepresents the direction of Fus3's role. The appropriate term is GO:2000218 negative regulation of invasive growth in response to glucose limitation (the same replacement is used for the paralog KSS1 review's repressive role).
Supporting Evidence:
PMID:10652102
Fus3 also inhibits haploid invasive growth by blocking cross-activation of invasive growth gene expression by the pheromone response signal cascade
PMID:10652102
A chromosomal copy of the kinase-defective fus3-K42R allele fails to inhibit either Ty1 transposition or invasive growth
GO:0001403 invasive growth in response to glucose limitation
IMP
PMID:15620357
Pheromone-dependent destruction of the Tec1 transcription fa...
MODIFY
Summary: Deletion of FUS3 causes pheromone signalling to erroneously activate filamentation genes and invasive growth, due to loss of Fus3-dependent Tec1 degradation.
Reason: Fus3 does not drive haploid invasive growth; it restrains it. Fus3 kinase activity blocks cross-activation of invasive-growth gene expression by the pheromone cascade (PMID:10652102), and Fus3 phosphorylates Tec1 to trigger its pheromone-induced destruction, so fus3 deletion causes erroneous invasive growth (PMID:15620357). The mutant phenotype is therefore evidence for negative regulation, and the positive process term misrepresents the direction of Fus3's role. The appropriate term is GO:2000218 negative regulation of invasive growth in response to glucose limitation (the same replacement is used for the paralog KSS1 review's repressive role).
Supporting Evidence:
PMID:15620357
deletion of FUS3, or deletion of DIA2 results in a loss of signaling specificity such that pheromone pathway signaling erroneously activates filamentation pathway gene expression and invasive growth
PMID:15620357
active Fus3 phosphorylates Tec1 on T273 in vitro
GO:0001403 invasive growth in response to glucose limitation
IMP
PMID:8001818
Elements of a single MAP kinase cascade in Saccharomyces cer...
MODIFY
Summary: Roberts and Fink described haploid invasive growth and its dependence on the STE20/STE11/STE7/STE12 kinase cascade; the FUS3 mutant phenotype is presumably reported in the full text (abstract-only in cache).
Reason: Fus3 does not drive haploid invasive growth; it restrains it. Fus3 kinase activity blocks cross-activation of invasive-growth gene expression by the pheromone cascade (PMID:10652102), and Fus3 phosphorylates Tec1 to trigger its pheromone-induced destruction, so fus3 deletion causes erroneous invasive growth (PMID:15620357). The mutant phenotype is therefore evidence for negative regulation, and the positive process term misrepresents the direction of Fus3's role. The appropriate term is GO:2000218 negative regulation of invasive growth in response to glucose limitation (the same replacement is used for the paralog KSS1 review's repressive role). The cached abstract does not describe the fus3 phenotype, so the direction is taken from the later mechanistic literature; the IMP itself is not disputed, only the choice of the positive process term.
Supporting Evidence:
PMID:8001818
the same components of the MAP kinase cascade necessary for diploid pseudohyphal development (STE20, STE11, STE7, and STE12) are also required for both filament formation and agar penetration in haploids
PMID:10652102
Fus3 also inhibits haploid invasive growth by blocking cross-activation of invasive growth gene expression by the pheromone response signal cascade
PMID:9393860
Fus3 has a different inhibitory activity that prevents the inappropriate activation of invasion by the pheromone response pathway
GO:0004672 protein kinase activity
HDA
PMID:16319894
Global analysis of protein phosphorylation in yeast.
ACCEPT
Summary: Proteome-chip in vitro kinase screen (Ptacek et al.) detected Fus3 protein kinase activity on many substrates.
Reason: Correct but general; Fus3 is a bona fide Ser/Thr MAP kinase. The more specific GO:0004707 MAP kinase activity is also annotated.
Supporting Evidence:
PMID:16319894
we identified over 4,000 phosphorylation events involving 1,325 different proteins
PMID:8384702
STE7 is a dual-specificity kinase that modifies FUS3 at the appropriate sites and stimulates its catalytic activity in vitro
GO:0004672 protein kinase activity
IEA
GO_REF:0000002
ACCEPT
Summary: InterPro2GO IEA from the Ser/Thr kinase active-site signature.
Reason: Correct, if general; Fus3 has a canonical protein kinase domain and is catalytically active (MAP kinase activity annotated more specifically).
Supporting Evidence:
file:yeast/FUS3/FUS3-uniprot.txt
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
GO:0004674 protein serine/threonine kinase activity
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA for protein serine/threonine kinase activity across the MAPK family.
Reason: Fus3 is a CMGC Ser/Thr MAPK; the IBA is phylogenetically sound and consistent with experimental data. GO:0004707 is the more specific term.
Supporting Evidence:
file:yeast/FUS3/FUS3-uniprot.txt
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
PMID:15620357
active Fus3 phosphorylates Tec1 on T273 in vitro
GO:0004707 MAP kinase activity
IDA
PMID:15620357
Pheromone-dependent destruction of the Tec1 transcription fa...
ACCEPT
Summary: Active Fus3 phosphorylates Tec1 on T273 in vitro; Tec1 degradation requires Fus3 kinase activity.
Reason: Direct demonstration of MAPK phosphorylation of a physiological substrate by pheromone-activated Fus3. This is the core molecular function (MAPK tier of the Ste11-Ste7-Fus3 cascade).
Supporting Evidence:
PMID:15620357
active Fus3 phosphorylates Tec1 on T273 in vitro
PMID:15620357
Degradation requires Fus3 kinase activity and a MAPK phosphorylation site in Tec1 at threonine 273.
GO:0004707 MAP kinase activity
IDA
PMID:8384702
MAP kinase-related FUS3 from S. cerevisiae is activated by S...
ACCEPT
Summary: Errede et al. showed Ste7 dual-phosphorylates Fus3 at the activating sites and stimulates Fus3 catalytic activity in vitro.
Reason: Establishes Fus3 as a MAPK activated by its MAPKK Ste7; core molecular function.
Supporting Evidence:
PMID:8384702
STE7 is a dual-specificity kinase that modifies FUS3 at the appropriate sites and stimulates its catalytic activity in vitro
PMID:1628831
this modification occurs at two amino acids of FUS3, threonine-180 and tyrosine-182
GO:0004707 MAP kinase activity
IEA
GO_REF:0000120
ACCEPT
Summary: Combined automated IEA for MAP kinase activity.
Reason: Correct; matches experimental evidence (PMID:8384702, PMID:15620357).
Supporting Evidence:
file:yeast/FUS3/FUS3-uniprot.txt
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
PMID:8384702
STE7 is a dual-specificity kinase that modifies FUS3 at the appropriate sites and stimulates its catalytic activity in vitro
GO:0005515 protein binding
IPI
PMID:15020407
Fus1p interacts with components of the Hog1p mitogen-activat...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:15020407).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:15020407
A two-hybrid matrix containing fusion proteins and pheromone response pathway signaling molecules reveals that Fus1p may participate in a complex network of interactions
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:15020407
Fus1p interacts with components of the Hog1p mitogen-activat...
REMOVE
Summary: Two-hybrid matrix interaction between Fus3 and its paralog MAPK Kss1.
Reason: Bare protein binding is uninformative, and no functional Fus3-Kss1 heteromeric complex has been characterised; the two MAPKs share docking partners (Ste7, Ste5) that could bridge them. Fus3 restrains Kss1 activation (PMID:11583629) but no direct binding-based mechanism is established. Removal of the generic protein binding row does not mean the reported interaction is false.
Supporting Evidence:
PMID:15020407
A two-hybrid matrix containing fusion proteins and pheromone response pathway signaling molecules reveals that Fus1p may participate in a complex network of interactions
PMID:11583629
active Fus3 limits the extent of Kss1 activation, thereby preventing inappropriate signal crossover
GO:0005515 protein binding
IPI
PMID:15020407
Fus1p interacts with components of the Hog1p mitogen-activat...
MODIFY
Summary: Fus3 interaction with the MAPKK kinase Ste11 (PMID:15020407).
Reason: Bare protein binding is uninformative. Two-hybrid studies repeatedly detected a Fus3-Ste11 interaction; Ste11 is the MAPKKK of the same cascade. The contact may be partly bridged by Ste5/Ste7 in vivo, but the two-hybrid readout supports mitogen-activated protein kinase kinase kinase binding as the informative replacement (consistent with the KSS1 review).
Supporting Evidence:
PMID:15020407
A two-hybrid matrix containing fusion proteins and pheromone response pathway signaling molecules reveals that Fus1p may participate in a complex network of interactions
PMID:7851759
Ste5p, a protein of unknown biochemical function, interacted with protein kinases that operate at each step of the MAP kinase cascade, specifically with Ste11p (an MEKK), Ste7p (an MEK), and Fus3p (a MAP kinase)
GO:0005515 protein binding
IPI
PMID:15020407
Fus1p interacts with components of the Hog1p mitogen-activat...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:15020407).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:15020407
A two-hybrid matrix containing fusion proteins and pheromone response pathway signaling molecules reveals that Fus1p may participate in a complex network of interactions
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005515 protein binding
IPI
PMID:19303851
The Ste5 scaffold directs mating signaling by catalytically ...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:19303851).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:19303851
we find that Fus3 is an intrinsically poor substrate for Ste7
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:19303851
The Ste5 scaffold directs mating signaling by catalytically ...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:19303851).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005515 protein binding
IPI
PMID:20489023
A global protein kinase and phosphatase interaction network ...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:20489023).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:20489023
We identified a kinase and phosphatase interaction (KPI) network of 1844 interactions in budding yeast by mass spectrometric analysis of protein complexes
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:20489023
A global protein kinase and phosphatase interaction network ...
REMOVE
Summary: AP-MS kinase/phosphatase interaction network detected Fus3 with Bck2.
Reason: Bare protein binding from high-throughput AP-MS with no characterised function for a Fus3-Bck2 association; no informative MF can be derived (consistent with the KSS1 review). Removal of the generic protein binding row does not mean the reported interaction is false.
Supporting Evidence:
PMID:20489023
We identified a kinase and phosphatase interaction (KPI) network of 1844 interactions in budding yeast by mass spectrometric analysis of protein complexes
GO:0005515 protein binding
IPI
PMID:23267104
Proteome-wide protein interaction measurements of bacterial ...
REMOVE
Summary: IPI with the mitochondrial inner-membrane translocase subunit Tim12, attributed to a microfluidic interaction study of Streptococcus pneumoniae proteins.
Reason: Bare protein binding is uninformative, and a Fus3-Tim12 association has no known functional context (Tim12 is an intermembrane-space TIM22 subunit). The cached text of this bacterial-protein interaction paper does not describe the yeast assay, so no informative MF can be derived. Removal of the generic protein binding row does not mean the reported interaction is false.
Supporting Evidence:
PMID:23267104
Binary protein--protein interactions in the model organism Streptococcus pneumoniae (TIGR4) are measured with a microfluidic high-throughput assay technology
GO:0005515 protein binding
IPI
PMID:23953117
Exploitation of latent allostery enables the evolution of ne...
REMOVE
Summary: Interaction of S. cerevisiae Fus3 with the Ste5 ortholog from Vanderwaltozyma polyspora (Kpol_1061p54) in an evolutionary study of Ste5 allosteric activator motifs.
Reason: Cross-species (xeno) interaction used to probe latent allostery; not a physiological interaction in S. cerevisiae. The native Fus3-Ste5 interaction from the same paper is captured by the scaffold protein binding replacement. Removal of the generic protein binding row does not mean the reported interaction is false.
Supporting Evidence:
PMID:23953117
One activator (Ste5-VWA) provides pathway insulation and dates to the divergence of Fus3 from its paralog, Kss1
GO:0005515 protein binding
IPI
PMID:23953117
Exploitation of latent allostery enables the evolution of ne...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:23953117).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:23953117
One activator (Ste5-VWA) provides pathway insulation and dates to the divergence of Fus3 from its paralog, Kss1
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:23953117
Exploitation of latent allostery enables the evolution of ne...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:23953117).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:23953117
which binds Fus3 and allosterically activates autophosphorylation of the MAP kinase on its activation loop tyrosine
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005515 protein binding
IPI
PMID:37968396
The social and structural architecture of the yeast protein ...
REMOVE
Summary: Large-scale interactome (Michaelis et al. 2023) detected Fus3 with Kss1.
Reason: Bare protein binding from a proteome-wide interaction map; no informative MF can be inferred for a Fus3-Kss1 association, which is plausibly bridged by shared cascade components. Removal of the generic protein binding row does not mean the reported interaction is false.
Supporting Evidence:
PMID:37968396
The 4,159 pull-downs generated a highly structured network of 3,927 proteins connected by 31,004 interactions
GO:0005515 protein binding
IPI
PMID:7851759
Protein-protein interactions in the yeast pheromone response...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:7851759).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:7851759
We also found that both Ste11p and Ste7p interact with Fus3p and Kss1p
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:7851759
Protein-protein interactions in the yeast pheromone response...
MODIFY
Summary: Fus3 interaction with the MAPKK kinase Ste11 (PMID:7851759).
Reason: Bare protein binding is uninformative. Two-hybrid studies repeatedly detected a Fus3-Ste11 interaction; Ste11 is the MAPKKK of the same cascade. The contact may be partly bridged by Ste5/Ste7 in vivo, but the two-hybrid readout supports mitogen-activated protein kinase kinase kinase binding as the informative replacement (consistent with the KSS1 review).
Supporting Evidence:
PMID:7851759
We also found that both Ste11p and Ste7p interact with Fus3p and Kss1p
PMID:7851759
Ste5p, a protein of unknown biochemical function, interacted with protein kinases that operate at each step of the MAP kinase cascade, specifically with Ste11p (an MEKK), Ste7p (an MEK), and Fus3p (a MAP kinase)
GO:0005515 protein binding
IPI
PMID:7851759
Protein-protein interactions in the yeast pheromone response...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:7851759).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:7851759
Ste5p, a protein of unknown biochemical function, interacted with protein kinases that operate at each step of the MAP kinase cascade, specifically with Ste11p (an MEKK), Ste7p (an MEK), and Fus3p (a MAP kinase)
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005515 protein binding
IPI
PMID:8062390
Ste5 tethers multiple protein kinases in the MAP kinase casc...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:8062390).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:8062390
By two-hybrid analysis, Ste11, Ste7, and Fus3 associate with different domains of Ste5
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:8062390
Ste5 tethers multiple protein kinases in the MAP kinase casc...
MODIFY
Summary: Fus3 interaction with the MAPKK kinase Ste11 (PMID:8062390).
Reason: Bare protein binding is uninformative. Two-hybrid studies repeatedly detected a Fus3-Ste11 interaction; Ste11 is the MAPKKK of the same cascade. The contact may be partly bridged by Ste5/Ste7 in vivo, but the two-hybrid readout supports mitogen-activated protein kinase kinase kinase binding as the informative replacement (consistent with the KSS1 review).
Supporting Evidence:
PMID:8062390
Ste5 copurifies with Ste11, Fus3, and a hypophosphorylated form of Ste7
PMID:7851759
Ste5p, a protein of unknown biochemical function, interacted with protein kinases that operate at each step of the MAP kinase cascade, specifically with Ste11p (an MEKK), Ste7p (an MEK), and Fus3p (a MAP kinase)
GO:0005515 protein binding
IPI
PMID:8062390
Ste5 tethers multiple protein kinases in the MAP kinase casc...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:8062390).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:8062390
By two-hybrid analysis, Ste11, Ste7, and Fus3 associate with different domains of Ste5
PMID:8062390
Ste5 copurifies with Ste11, Fus3, and a hypophosphorylated form of Ste7
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005515 protein binding
IPI
PMID:8668180
Signaling in the yeast pheromone response pathway: specific ...
MODIFY
Summary: Fus3 interaction with the MAPKK Ste7 (PMID:8668180).
Reason: Bare protein binding is uninformative. Ste7 is the MAPKK that dually phosphorylates Fus3 on Thr180/Tyr182, and Fus3 forms a specific, high-affinity docking complex with Ste7 (Kd ~5 nM) that is independent of Ste5 (PMID:8668180). The informative MF is mitogen-activated protein kinase kinase binding (same replacement used in the KSS1 review).
Supporting Evidence:
PMID:8668180
Ste7 phosphorylated Kss1 (or Fus3), and Kss1 (or Fus3) phosphorylated Ste7, in a pheromone-stimulated manner
PMID:8668180
Kss1 and Fus3 could each form a tight complex (Kd of approximately 5 nM) with Ste7 in the absence of any additional yeast proteins
GO:0005515 protein binding
IPI
PMID:9311911
Ste5 RING-H2 domain: role in Ste4-promoted oligomerization f...
MODIFY
Summary: Fus3 interaction with the scaffold protein Ste5 (PMID:9311911).
Reason: Bare protein binding is uninformative. Ste5 is the MAPK cascade scaffold that tethers Ste11, Ste7 and Fus3 and allosterically unlocks Fus3 for Ste7 phosphorylation (PMID:19303851); Fus3 binds Ste5 through the Fus3-binding domain (FBD) and the VWA/minimal-scaffold domain. The informative MF for Fus3's side of this interaction is scaffold protein binding.
Proposed replacements: scaffold protein binding
Supporting Evidence:
PMID:9311911
In vitro Ste5(C177A C180A) bound each component of the MAPK cascade, but not Ste4
PMID:19303851
We identify and structurally characterize a domain in Ste5 that catalytically unlocks Fus3 for phosphorylation by Ste7
GO:0005524 ATP binding
IEA
GO_REF:0000002
ACCEPT
Summary: InterPro2GO IEA for ATP binding from the protein kinase domain.
Reason: Fus3 is an ATP-dependent kinase with a conserved Lys42 whose mutation (K42R) abolishes kinase function.
Supporting Evidence:
PMID:10652102
A chromosomal copy of the kinase-defective fus3-K42R allele fails to inhibit either Ty1 transposition or invasive growth
GO:0005634 nucleus
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA for nucleus (is_active_in) across MAPKs.
Reason: Fus3 shuttles between cytoplasm and nucleus and active Fus3 translocates to the nucleus to regulate Ste12/Dig1/Dig2 and Tec1.
Supporting Evidence:
PMID:11781566
Fus3p rapidly shuttles between the nucleus and the cytoplasm independently of pheromones
PMID:11781566
activated Fus3p, which dissociates from Ste5p and translocates to the nucleus
GO:0005634 nucleus
IDA
PMID:10233162
Characterization of Fus3 localization: active Fus3 localizes...
ACCEPT
Summary: Immunofluorescence localises Fus3 throughout cytoplasm and nucleus, slightly enriched in nucleus after pheromone.
Reason: Direct localisation evidence; nuclear Fus3 regulates mating transcription.
Supporting Evidence:
PMID:10233162
By indirect immunofluorescence, Fus3 localizes in punctate spots throughout the cytoplasm and nucleus, with slightly enhanced nuclear localization after pheromone stimulation.
GO:0005634 nucleus
IDA
PMID:18417610
Analysis of the yeast kinome reveals a network of regulated ...
ACCEPT
Summary: Kinome-wide YFP localisation: Fus3 shifts to the nucleus during filamentous growth.
Reason: Direct localisation evidence consistent with other studies.
Supporting Evidence:
PMID:18417610
The proteins Bcy1p, Fus3p, Ksp1p, Kss1p, Sks1p, and Tpk2p distributed evenly over the cell under conditions of vegetative growth, but they localized predominantly to the nucleus during filamentous growth.
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: UniProt subcellular location mapping (Nucleus).
Reason: Consistent with experimental localisation data.
Supporting Evidence:
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
GO:0005737 cytoplasm
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA for cytoplasm (is_active_in).
Reason: Fus3 is activated in cytoplasmic/cortical Ste5 complexes and phosphorylates cytoplasmic substrates (Far1 at the cortex, Fus2).
Supporting Evidence:
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
PMID:10233162
Fus3 has highest specific activity within a 350- to 500-kDa complex previously shown to contain Ste5, Ste11, and Ste7.
GO:0005737 cytoplasm
IDA
PMID:10233162
Characterization of Fus3 localization: active Fus3 localizes...
ACCEPT
Summary: Immunofluorescence shows Fus3 in punctate cytoplasmic spots and nucleus.
Reason: Direct localisation evidence.
Supporting Evidence:
PMID:10233162
By indirect immunofluorescence, Fus3 localizes in punctate spots throughout the cytoplasm and nucleus, with slightly enhanced nuclear localization after pheromone stimulation.
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: UniProt subcellular location mapping (Cytoplasm).
Reason: Consistent with experimental localisation data.
Supporting Evidence:
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
GO:0005739 mitochondrion
HDA
PMID:14576278
The proteome of Saccharomyces cerevisiae mitochondria.
MARK AS OVER ANNOTATED
Summary: Detection in a high-throughput mass-spectrometric mitochondrial proteome.
Reason: Fus3 is an abundant soluble cytoplasmic/nuclear kinase with no mitochondrial targeting signal and no mitochondrial function; identification in purified-organelle proteomics most likely reflects co-purifying contamination. Not supported by any targeted localisation study.
Supporting Evidence:
PMID:14576278
From >20 million MS spectra, 750 different proteins were identified
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
GO:0005739 mitochondrion
HDA
PMID:16823961
Toward the complete yeast mitochondrial proteome: multidimen...
MARK AS OVER ANNOTATED
Summary: Detection in the PROMITO multidimensional mitochondrial proteome.
Reason: As for PMID:14576278: proteomic detection without targeted confirmation or functional rationale; likely contaminant.
Supporting Evidence:
PMID:16823961
A total of 851 different proteins (PROMITO dataset) were identified
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
GO:0010494 cytoplasmic stress granule
HDA
PMID:26777405
ATPase-Modulated Stress Granules Contain a Diverse Proteome ...
KEEP AS NON CORE
Summary: Identification in purified yeast stress granule cores by mass spectrometry.
Reason: High-throughput proteomic localisation under stress; plausible for a cytoplasmic kinase but with no known functional consequence for mating signalling. Kept as non-core (consistent with treatment of other pathway kinases such as PBS2).
Supporting Evidence:
PMID:26777405
Mass spectroscopy of purified yeast and mammalian stress granule cores identified new components of stress granules
GO:0010526 transposable element silencing
IMP
PMID:9566871
Posttranslational regulation of Ty1 retrotransposition by mi...
KEEP AS NON CORE
Summary: Fus3, activated at basal levels through the pheromone pathway, post-translationally suppresses Ty1 retrotransposition by destabilising virus-like particle proteins.
Reason: Solid genetic evidence that Fus3 kinase activity limits Ty1 transposition, but it acts post-translationally and indirectly (via inhibition of the invasive growth pathway, PMID:10652102), so the fit to 'transposable element silencing' (decreased TE expression) is loose. The regulation-of-transposition terms are obsolete, so this is the closest available term; kept as a non-core, pleiotropic output.
Supporting Evidence:
PMID:9566871
These findings suggest that Fus3 suppresses Ty1 transposition by destabilizing viruslike particle-associated proteins.
PMID:9566871
We demonstrate that suppression of Ty1 transposition in naive cells requires basal levels of Fus3 activation.
GO:0042597 periplasmic space
IEA
GO_REF:0000044
REMOVE
Summary: UniProt subcellular location 'Periplasm' mapped to periplasmic space.
Reason: Fus3 is a soluble intracellular MAP kinase without a signal peptide. The UniProt 'Periplasm' location cites PMID:11781566, which reports nuclear/cytoplasmic Fus3 and Fus3 at the tips of mating projections (cell cortex), not a cell wall-plasma membrane compartment. The mapping is erroneous (same conclusion reached for KSS1).
Supporting Evidence:
PMID:11781566
Ste5p and Fus3p were found in the nucleus and the cytoplasm
PMID:11781566
Ste5p, Ste7p and Fus3p also localized to tips of mating projections in pheromone-treated cells.
GO:0042802 identical protein binding
IPI
PMID:15020407
Fus1p interacts with components of the Hog1p mitogen-activat...
REMOVE
Summary: Fus3 self-interaction in a two-hybrid matrix.
Reason: Identical protein binding is essentially as uninformative as bare protein binding here: there is no evidence that Fus3 homodimerisation is part of its function (unlike some metazoan ERKs), and two-hybrid self-interaction could be bridged by endogenous Ste5. Removal does not assert the interaction is false.
Supporting Evidence:
PMID:15020407
A two-hybrid matrix containing fusion proteins and pheromone response pathway signaling molecules reveals that Fus1p may participate in a complex network of interactions
GO:0042802 identical protein binding
IPI
PMID:23953117
Exploitation of latent allostery enables the evolution of ne...
REMOVE
Summary: Fus3-Fus3 interaction reported in the Coyle et al. study of Ste5 allosteric activation of Fus3.
Reason: No functional role for Fus3 self-association has been established; the paper concerns Ste5-FBD/VWA allosteric activation of Fus3 autophosphorylation, not Fus3 dimerisation. The generic identical-protein-binding term adds no functional information.
Supporting Evidence:
PMID:23953117
which binds Fus3 and allosterically activates autophosphorylation of the MAP kinase on its activation loop tyrosine
GO:0043332 mating projection tip
IDA
PMID:11781566
MAP kinase dynamics in response to pheromones in budding yea...
ACCEPT
Summary: GFP-Fus3 localises to tips of mating projections in pheromone-treated cells, recruited by membrane-bound Ste5.
Reason: Direct localisation evidence; the shmoo tip is where Ste5 activates Fus3 and where Fus3 regulates polarised growth.
Supporting Evidence:
PMID:11781566
Ste5p, Ste7p and Fus3p also localized to tips of mating projections in pheromone-treated cells.
PMID:11781566
Membrane-bound Ste5p can specifically recruit Fus3p and Ste7p to the cell cortex.
GO:0043332 mating projection tip
IDA
PMID:17952059
Spatial regulation of Fus3 MAP kinase activity through a rea...
ACCEPT
Summary: FLIM reveals a gradient of active, dually phosphorylated Fus3 emanating from the mating projection tip.
Reason: Supports activation of Fus3 at the projection tip.
Supporting Evidence:
PMID:17952059
revealed a gradient of Fus3(PP) activity emanating from the tip of the mating projection
GO:0043409 negative regulation of MAPK cascade
IPI
PMID:16424299
The Ste5 scaffold allosterically modulates signaling output ...
KEEP AS NON CORE
Summary: Ste5 FBD allosterically activates Fus3 autophosphorylation; the resulting partially active Fus3 promotes Ste5 phosphorylation and reduces pathway transcriptional output (negative feedback).
Reason: Fus3 itself performs the feedback step (phosphorylating Ste5), so the regulatory annotation is appropriate. Fus3 also limits Kss1 activation (PMID:11583629). Negative feedback tunes the cascade rather than being Fus3's primary signalling function, so kept as non-core.
Supporting Evidence:
PMID:16424299
autoactivated Fus3 appears to have a negative regulatory role, promoting Ste5 phosphorylation and a decrease in pathway transcriptional output
PMID:11583629
active Fus3 limits the extent of Kss1 activation, thereby preventing inappropriate signal crossover
GO:0046827 positive regulation of protein export from nucleus
IMP
PMID:22588722
A mechanism for the coordination of proliferation and differ...
KEEP AS NON CORE
Summary: Fus3 phosphorylates Fus2 Ser84 to drive Fus2 nuclear export, and down-regulates Ser67 phosphorylation, coupling cell-cycle arrest to cell fusion.
Reason: Direct experimental evidence that Fus3 phosphorylates Fus2 to promote its nuclear export; one specific downstream output of Fus3 in preparation for cell fusion rather than the core signalling function.
Supporting Evidence:
PMID:22588722
In response to pheromone signaling, the mitogen-activated protein kinase Fus3p phosphorylates Ser 84 in Fus2p to drive nuclear export.
GO:0071507 pheromone response MAPK cascade
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA for pheromone response MAPK cascade, from the fungal Fus3/Spk1 mating-MAPK node PTN001172087.
Reason: Fus3 is the defining MAPK of the pheromone response MAPK cascade (the GO definition names Fus3). Core process.
Supporting Evidence:
PMID:8159759
reconstituted a kinase cascade in which STE11 phosphorylates and activates STE7, which in turn phosphorylates the mitogen-activated protein kinase FUS3
PMID:8384702
STE7 is a dual-specificity kinase that modifies FUS3 at the appropriate sites and stimulates its catalytic activity in vitro
GO:0071507 pheromone response MAPK cascade
IDA
PMID:8159759
Reconstitution of a yeast protein kinase cascade in vitro: a...
ACCEPT
Summary: In vitro reconstitution of the Ste11 -> Ste7 -> Fus3 kinase cascade with purified GST fusions.
Reason: Directly demonstrates Fus3 as the terminal kinase of the pheromone MAPK cascade. Core process.
Supporting Evidence:
PMID:8159759
reconstituted a kinase cascade in which STE11 phosphorylates and activates STE7, which in turn phosphorylates the mitogen-activated protein kinase FUS3
GO:0106310 protein serine kinase activity
IEA
GO_REF:0000116
ACCEPT
Summary: Rhea-based IEA for protein serine kinase activity (RHEA:17989).
Reason: Fus3 phosphorylates serine and threonine residues of its substrates; correct though less specific than MAP kinase activity.
Supporting Evidence:
file:yeast/FUS3/FUS3-uniprot.txt
Reaction=L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP +

Core Functions

Terminal MAP kinase of the pheromone response cascade: activated on the Ste5 scaffold by Ste7 dual phosphorylation (Thr180/Tyr182), Fus3 phosphorylates Ste12, Dig1/Dig2 and Far1 to induce mating-gene transcription and G1 arrest, acting at the mating projection tip, in the cytoplasm and in the nucleus.

Supporting Evidence:
  • PMID:8384702
    STE7 is a dual-specificity kinase that modifies FUS3 at the appropriate sites and stimulates its catalytic activity in vitro
  • PMID:8159759
    reconstituted a kinase cascade in which STE11 phosphorylates and activates STE7, which in turn phosphorylates the mitogen-activated protein kinase FUS3
  • PMID:8334305
    These data support a model in which FUS3 mediates transcription and G1 arrest by direct activation of STE12 and FAR1
  • PMID:9094309
    Rst1 and Rst2 were prominent substrates in kinase reactions of Fus3 immune complexes from pheromone-treated cells
  • PMID:11781566
    Ste5p, Ste7p and Fus3p also localized to tips of mating projections in pheromone-treated cells.
  • file:yeast/FUS3/FUS3-deep-research-falcon.md
    Its primary function is to convert pheromone-receptor activation into coordinated phosphorylation of nuclear, cytoplasmic, and cortical proteins.

Pathway insulation: pheromone-activated Fus3 phosphorylates the filamentation transcription factor Tec1 (T273), triggering its SCF-dependent degradation, and restrains Kss1 activation, preventing the pheromone signal from inducing filamentous/invasive growth.

Supporting Evidence:
  • PMID:15620357
    active Fus3 phosphorylates Tec1 on T273 in vitro
  • PMID:15620357
    deletion of FUS3, or deletion of DIA2 results in a loss of signaling specificity such that pheromone pathway signaling erroneously activates filamentation pathway gene expression and invasive growth
  • PMID:10652102
    Fus3 also inhibits haploid invasive growth by blocking cross-activation of invasive growth gene expression by the pheromone response signal cascade
  • PMID:11583629
    active Fus3 limits the extent of Kss1 activation, thereby preventing inappropriate signal crossover
  • PMID:19897738
    The mating pathway MAPK, Fus3, phosphorylates Tec1, resulting in its recognition by the SCF

References

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Suggested Questions for Experts

Q: Which Gpa1-associated Fus3 targets mediate polarity-site guidance if not Ste4, Ste18, Far1, or Bni1, and should those direct inputs be captured as has_input on MAP kinase activity in a GO-CAM of the pheromone response?

Q: Is GO:0010526 transposable element silencing the right home for Fus3's post-translational suppression of Ty1 retrotransposition, given that all regulation-of-transposition terms are obsolete?

Q: Should Far1-mediated G1 arrest be annotated to Fus3 as a regulation-of-cell-cycle process, given that Fus3 directly phosphorylates Far1 (the actual CDK inhibitor)?

Suggested Experiments

Experiment: Analog-sensitive fus3 allele combined with quantitative phosphoproteomics after pheromone treatment in a kss1 deletion background, to define the direct Fus3 substrate set and separate it from Kss1-dependent sites.

Deep Research

Falcon

(FUS3-deep-research-falcon.md)

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SGD

(FUS3-deep-research-sgd.md)
SGD gene description for FUS3 (yeast) SGD

SGD gene description for FUS3 (yeast)

Mitogen-activated serine/threonine protein kinase involved in mating; phosphoactivated by Ste7p; substrates include Ste12p, Far1p, Bni1p, Sst2p; inhibits invasive growth during mating by phosphorylating Tec1p, promoting its; inhibits recruitment of Ste5p, Cdc42p-mediated asymmetry and mating morphogenesis

πŸ“š Additional Documentation

Notes

(FUS3-notes.md)

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πŸ“„ View Raw YAML

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