NAP1

UniProt ID: P25293
Organism: Saccharomyces cerevisiae
Review Status: DRAFT
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Gene Description

NAP1 encodes a conserved histone chaperone with roles in chromatin assembly, ribosome biogenesis, and cell cycle regulation. Nap1p functions primarily as an H2A-H2B chaperone, cooperating with the karyopherin Kap114 to transport histone H2A-H2B dimers into the nucleus for deposition into nucleosomes; binding of Ran-GTP (Gsp1) to this complex promotes accurate nucleosome assembly. Nap1p also participates in histone exchange, facilitating replacement of canonical H2A-H2B dimers with variant dimers. Beyond chromatin, Nap1p serves as an assembly chaperone for the small ribosomal subunit protein eS6 (Rps6a/Rps6b), promoting its solubility and contributing to 40S subunit biogenesis. During mitosis, Nap1p regulates septin organization at the bud neck and modulates B-type cyclin (Clb2p) function, linking chromatin dynamics to cell cycle progression. Orthologous to human NAP1L1-4.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0000785 chromatin
IBA
GO_REF:0000033
ACCEPT
Summary: Manual review: chromatin is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0005634 nucleus
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Manual review: nucleus may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0006334 nucleosome assembly
IBA
GO_REF:0000033
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0042393 histone binding
IBA
GO_REF:0000033
ACCEPT
Summary: Manual review: histone binding is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0003682 chromatin binding
IBA
GO_REF:0000033
ACCEPT
Summary: Manual review: chromatin binding is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0003677 DNA binding
IEA
GO_REF:0000043
KEEP AS NON CORE
Summary: Manual review: DNA binding may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0005634 nucleus
IEA
GO_REF:0000120
KEEP AS NON CORE
Summary: Manual review: nucleus may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0005737 cytoplasm
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: Manual review: cytoplasm may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0005935 cellular bud neck
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: Manual review: cellular bud neck may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0005940 septin ring
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: Manual review: septin ring may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0006334 nucleosome assembly
IEA
GO_REF:0000002
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0005515 protein binding
IPI
PMID:10688190
A comprehensive analysis of protein-protein interactions in ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:11805837
Systematic identification of protein complexes in Saccharomy...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:12058072
Cell cycle-dependent assembly of a Gin4-septin complex.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:14645854
ATP-driven exchange of histone H2AZ variant catalyzed by SWR...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:14759368
High-definition macromolecular composition of yeast RNA-proc...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:15045029
A protein complex containing the conserved Swi2/Snf2-related...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:16299494
A phosphatase complex that dephosphorylates gammaH2AX regula...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:16429126
Proteome survey reveals modularity of the yeast cell machine...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:16554755
Global landscape of protein complexes in the yeast Saccharom...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:18467557
An in vivo map of the yeast protein interactome.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:18719252
High-quality binary protein interaction map of the yeast int...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:19172749
Histone chaperone specificity in Rtt109 activation.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:19536198
An atlas of chaperone-protein interactions in Saccharomyces ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:20489023
A global protein kinase and phosphatase interaction network ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:21179020
Defining the budding yeast chromatin-associated interactome.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:23468594
A safeguard mechanism regulates Rho GTPases to coordinate cy...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:25416945
A memory system of negative polarity cues prevents replicati...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:37968396
The social and structural architecture of the yeast protein ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:9214386
Control of mitotic events by Nap1 and the Gin4 kinase.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:9813092
The septins are required for the mitosis-specific activation...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0042802 identical protein binding
IPI
PMID:16432217
The structure of nucleosome assembly protein 1.
MARK AS OVER ANNOTATED
Summary: Manual review: identical protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0042802 identical protein binding
IPI
PMID:18467557
An in vivo map of the yeast protein interactome.
MARK AS OVER ANNOTATED
Summary: Manual review: identical protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0042802 identical protein binding
IPI
PMID:18719252
High-quality binary protein interaction map of the yeast int...
MARK AS OVER ANNOTATED
Summary: Manual review: identical protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0042802 identical protein binding
IPI
PMID:21179020
Defining the budding yeast chromatin-associated interactome.
MARK AS OVER ANNOTATED
Summary: Manual review: identical protein binding is too generic or over-extended for NAP1.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0140597 protein carrier chaperone
IDA
PMID:31062022
Tsr4 and Nap1, two novel members of the ribosomal protein ch...
ACCEPT
Summary: Manual review: protein carrier chaperone is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0000511 H2A-H2B histone complex chaperone activity
IDA
PMID:39601790
Nap1 and Kap114 co-chaperone H2A-H2B and facilitate targeted...
ACCEPT
Summary: Manual review: H2A-H2B histone complex chaperone activity is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0006334 nucleosome assembly
IDA
PMID:39601790
Nap1 and Kap114 co-chaperone H2A-H2B and facilitate targeted...
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0000511 H2A-H2B histone complex chaperone activity
IDA
PMID:27225933
Structural evidence for Nap1-dependent H2A-H2B deposition an...
ACCEPT
Summary: Manual review: H2A-H2B histone complex chaperone activity is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0006334 nucleosome assembly
IDA
PMID:27225933
Structural evidence for Nap1-dependent H2A-H2B deposition an...
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0000920 septum digestion after cytokinesis
NAS
PMID:12058072
Cell cycle-dependent assembly of a Gin4-septin complex.
KEEP AS NON CORE
Summary: Manual review: septum digestion after cytokinesis may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0000921 septin ring assembly
NAS
PMID:12058072
Cell cycle-dependent assembly of a Gin4-septin complex.
KEEP AS NON CORE
Summary: Manual review: septin ring assembly may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0006607 NLS-bearing protein import into nucleus
IMP
PMID:12456659
A role for nucleosome assembly protein 1 in the nuclear tran...
KEEP AS NON CORE
Summary: Manual review: NLS-bearing protein import into nucleus may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0042274 ribosomal small subunit biogenesis
IGI
PMID:31062022
Tsr4 and Nap1, two novel members of the ribosomal protein ch...
KEEP AS NON CORE
Summary: Manual review: ribosomal small subunit biogenesis may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0051082 unfolded protein binding
IDA
PMID:31062022
Tsr4 and Nap1, two novel members of the ribosomal protein ch...
MODIFY
Summary: Manual review: unfolded protein binding is better represented by a more specific replacement term for NAP1.
Reason: Modified to align with current curation guidance and improve term specificity.
GO:0005737 cytoplasm
IDA
PMID:30341817
Septin-associated proteins Aim44 and Nis1 traffic between th...
KEEP AS NON CORE
Summary: Manual review: cytoplasm may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0032174 cellular bud neck septin collar
IDA
PMID:30341817
Septin-associated proteins Aim44 and Nis1 traffic between th...
KEEP AS NON CORE
Summary: Manual review: cellular bud neck septin collar may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0032153 cell division site
IDA
PMID:25416945
A memory system of negative polarity cues prevents replicati...
KEEP AS NON CORE
Summary: Manual review: cell division site may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0098841 protein localization to cell division site after cytokinesis
IMP
PMID:25416945
A memory system of negative polarity cues prevents replicati...
KEEP AS NON CORE
Summary: Manual review: protein localization to cell division site after cytokinesis may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0006334 nucleosome assembly
IDA
PMID:1400414
Functional analysis of nucleosome assembly protein, NAP-1. T...
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0008047 enzyme activator activity
IDA
PMID:22308335
Histone density is maintained during transcription mediated ...
KEEP AS NON CORE
Summary: Manual review: enzyme activator activity may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0031116 positive regulation of microtubule polymerization
IMP
PMID:7622567
NAP1 acts with Clb1 to perform mitotic functions and to supp...
KEEP AS NON CORE
Summary: Manual review: positive regulation of microtubule polymerization may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0005737 cytoplasm
IDA
PMID:7622566
Members of the NAP/SET family of proteins interact specifica...
KEEP AS NON CORE
Summary: Manual review: cytoplasm may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0006334 nucleosome assembly
IDA
PMID:2016313
Identification and molecular cloning of yeast homolog of nuc...
ACCEPT
Summary: Manual review: nucleosome assembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0006337 nucleosome disassembly
IDA
PMID:16492771
Chromatin remodeling by nucleosome disassembly in vitro.
ACCEPT
Summary: Manual review: nucleosome disassembly is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0007117 budding cell bud growth
IMP
PMID:13680156
Saccharomyces cerevisiae Ats1p interacts with Nap1p, a cytop...
KEEP AS NON CORE
Summary: Manual review: budding cell bud growth may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0030332 cyclin binding
IPI
PMID:7622566
Members of the NAP/SET family of proteins interact specifica...
KEEP AS NON CORE
Summary: Manual review: cyclin binding may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0032968 positive regulation of transcription elongation by RNA polymerase II
IDA
PMID:22308335
Histone density is maintained during transcription mediated ...
KEEP AS NON CORE
Summary: Manual review: positive regulation of transcription elongation by RNA polymerase II may be context-dependent or peripheral for NAP1.
Reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
GO:0042393 histone binding
IDA
PMID:17289584
Chz1, a nuclear chaperone for histone H2AZ.
ACCEPT
Summary: Manual review: histone binding is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0042393 histone binding
IDA
PMID:21348863
Assembly states of the nucleosome assembly protein 1 (NAP-1)...
ACCEPT
Summary: Manual review: histone binding is consistent with known biology of NAP1.
Reason: Retained as supported or plausible for this gene and evidence context.

References

Gene Ontology annotation through association of InterPro records with GO terms
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae.
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.
Cell cycle-dependent assembly of a Gin4-septin complex.
A role for nucleosome assembly protein 1 in the nuclear transport of histones H2A and H2B.
Saccharomyces cerevisiae Ats1p interacts with Nap1p, a cytoplasmic protein that controls bud morphogenesis.
Functional analysis of nucleosome assembly protein, NAP-1. The negatively charged COOH-terminal region is not necessary for the intrinsic assembly activity.
ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.
High-definition macromolecular composition of yeast RNA-processing complexes.
A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin.
A phosphatase complex that dephosphorylates gammaH2AX regulates DNA damage checkpoint recovery.
Proteome survey reveals modularity of the yeast cell machinery.
The structure of nucleosome assembly protein 1.
Chromatin remodeling by nucleosome disassembly in vitro.
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.
Chz1, a nuclear chaperone for histone H2AZ.
An in vivo map of the yeast protein interactome.
High-quality binary protein interaction map of the yeast interactome network.
Histone chaperone specificity in Rtt109 activation.
An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell.
Identification and molecular cloning of yeast homolog of nucleosome assembly protein I which facilitates nucleosome assembly in vitro.
A global protein kinase and phosphatase interaction network in yeast.
Defining the budding yeast chromatin-associated interactome.
Assembly states of the nucleosome assembly protein 1 (NAP-1) revealed by sedimentation velocity and non-denaturing MS.
Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.
A safeguard mechanism regulates Rho GTPases to coordinate cytokinesis with the establishment of cell polarity.
A memory system of negative polarity cues prevents replicative aging.
Structural evidence for Nap1-dependent H2A-H2B deposition and nucleosome assembly.
Septin-associated proteins Aim44 and Nis1 traffic between the bud neck and the nucleus in the yeast Saccharomyces cerevisiae.
Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME.
The social and structural architecture of the yeast protein interactome.
Nap1 and Kap114 co-chaperone H2A-H2B and facilitate targeted histone release in the nucleus.
Members of the NAP/SET family of proteins interact specifically with B-type cyclins.
NAP1 acts with Clb1 to perform mitotic functions and to suppress polar bud growth in budding yeast.
Control of mitotic events by Nap1 and the Gin4 kinase.
The septins are required for the mitosis-specific activation of the Gin4 kinase.

📄 View Raw YAML

id: P25293
gene_symbol: NAP1
product_type: PROTEIN
status: DRAFT
taxon:
  id: NCBITaxon:559292
  label: Saccharomyces cerevisiae
description: >-
  NAP1 encodes a conserved histone chaperone with roles in chromatin assembly,
  ribosome biogenesis, and cell cycle regulation. Nap1p functions primarily as
  an H2A-H2B chaperone, cooperating with the karyopherin Kap114 to transport
  histone H2A-H2B dimers into the nucleus for deposition into nucleosomes;
  binding of Ran-GTP (Gsp1) to this complex promotes accurate nucleosome
  assembly. Nap1p also participates in histone exchange, facilitating
  replacement of canonical H2A-H2B dimers with variant dimers. Beyond
  chromatin, Nap1p serves as an assembly chaperone for the small ribosomal
  subunit protein eS6 (Rps6a/Rps6b), promoting its solubility and
  contributing to 40S subunit biogenesis. During mitosis, Nap1p regulates
  septin organization at the bud neck and modulates B-type cyclin (Clb2p)
  function, linking chromatin dynamics to cell cycle progression. Orthologous
  to human NAP1L1-4.
existing_annotations:
- term:
    id: GO:0000785
    label: chromatin
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  review:
    summary: 'Manual review: chromatin is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  review:
    summary: 'Manual review: nucleus may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0042393
    label: histone binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  review:
    summary: 'Manual review: histone binding is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0003682
    label: chromatin binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  review:
    summary: 'Manual review: chromatin binding is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0003677
    label: DNA binding
  evidence_type: IEA
  original_reference_id: GO_REF:0000043
  review:
    summary: 'Manual review: DNA binding may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  review:
    summary: 'Manual review: nucleus may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: 'Manual review: cytoplasm may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0005935
    label: cellular bud neck
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: 'Manual review: cellular bud neck may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0005940
    label: septin ring
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  review:
    summary: 'Manual review: septin ring may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IEA
  original_reference_id: GO_REF:0000002
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:10688190
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:11805837
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:12058072
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:14645854
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:14759368
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:15045029
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16299494
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16429126
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16554755
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:18467557
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:18719252
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19172749
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19536198
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:20489023
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21179020
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:23468594
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25416945
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:37968396
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:9214386
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:9813092
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0042802
    label: identical protein binding
  evidence_type: IPI
  original_reference_id: PMID:16432217
  review:
    summary: 'Manual review: identical protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0042802
    label: identical protein binding
  evidence_type: IPI
  original_reference_id: PMID:18467557
  review:
    summary: 'Manual review: identical protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0042802
    label: identical protein binding
  evidence_type: IPI
  original_reference_id: PMID:18719252
  review:
    summary: 'Manual review: identical protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0042802
    label: identical protein binding
  evidence_type: IPI
  original_reference_id: PMID:21179020
  review:
    summary: 'Manual review: identical protein binding is too generic or over-extended for NAP1.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0140597
    label: protein carrier chaperone
  evidence_type: IDA
  original_reference_id: PMID:31062022
  review:
    summary: 'Manual review: protein carrier chaperone is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0000511
    label: H2A-H2B histone complex chaperone activity
  evidence_type: IDA
  original_reference_id: PMID:39601790
  review:
    summary: 'Manual review: H2A-H2B histone complex chaperone activity is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IDA
  original_reference_id: PMID:39601790
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0000511
    label: H2A-H2B histone complex chaperone activity
  evidence_type: IDA
  original_reference_id: PMID:27225933
  review:
    summary: 'Manual review: H2A-H2B histone complex chaperone activity is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IDA
  original_reference_id: PMID:27225933
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0000920
    label: septum digestion after cytokinesis
  evidence_type: NAS
  original_reference_id: PMID:12058072
  review:
    summary: 'Manual review: septum digestion after cytokinesis may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0000921
    label: septin ring assembly
  evidence_type: NAS
  original_reference_id: PMID:12058072
  review:
    summary: 'Manual review: septin ring assembly may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0006607
    label: NLS-bearing protein import into nucleus
  evidence_type: IMP
  original_reference_id: PMID:12456659
  review:
    summary: 'Manual review: NLS-bearing protein import into nucleus may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0042274
    label: ribosomal small subunit biogenesis
  evidence_type: IGI
  original_reference_id: PMID:31062022
  review:
    summary: 'Manual review: ribosomal small subunit biogenesis may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0051082
    label: unfolded protein binding
  evidence_type: IDA
  original_reference_id: PMID:31062022
  review:
    summary: 'Manual review: unfolded protein binding is better represented by a more specific replacement term for NAP1.'
    action: MODIFY
    reason: Modified to align with current curation guidance and improve term specificity.
    proposed_replacement_terms:
    - id: GO:0000511
      label: H2A-H2B histone complex chaperone activity
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:30341817
  review:
    summary: 'Manual review: cytoplasm may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0032174
    label: cellular bud neck septin collar
  evidence_type: IDA
  original_reference_id: PMID:30341817
  review:
    summary: 'Manual review: cellular bud neck septin collar may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0032153
    label: cell division site
  evidence_type: IDA
  original_reference_id: PMID:25416945
  review:
    summary: 'Manual review: cell division site may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0098841
    label: protein localization to cell division site after cytokinesis
  evidence_type: IMP
  original_reference_id: PMID:25416945
  review:
    summary: 'Manual review: protein localization to cell division site after cytokinesis may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IDA
  original_reference_id: PMID:1400414
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0008047
    label: enzyme activator activity
  evidence_type: IDA
  original_reference_id: PMID:22308335
  review:
    summary: 'Manual review: enzyme activator activity may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0031116
    label: positive regulation of microtubule polymerization
  evidence_type: IMP
  original_reference_id: PMID:7622567
  review:
    summary: 'Manual review: positive regulation of microtubule polymerization may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:7622566
  review:
    summary: 'Manual review: cytoplasm may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0006334
    label: nucleosome assembly
  evidence_type: IDA
  original_reference_id: PMID:2016313
  review:
    summary: 'Manual review: nucleosome assembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0006337
    label: nucleosome disassembly
  evidence_type: IDA
  original_reference_id: PMID:16492771
  review:
    summary: 'Manual review: nucleosome disassembly is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0007117
    label: budding cell bud growth
  evidence_type: IMP
  original_reference_id: PMID:13680156
  review:
    summary: 'Manual review: budding cell bud growth may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0030332
    label: cyclin binding
  evidence_type: IPI
  original_reference_id: PMID:7622566
  review:
    summary: 'Manual review: cyclin binding may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0032968
    label: positive regulation of transcription elongation by RNA polymerase II
  evidence_type: IDA
  original_reference_id: PMID:22308335
  review:
    summary: 'Manual review: positive regulation of transcription elongation by RNA polymerase II may be context-dependent or peripheral for NAP1.'
    action: KEEP_AS_NON_CORE
    reason: Kept as non-core to preserve potentially valid context-specific annotation without elevating it to core function.
- term:
    id: GO:0042393
    label: histone binding
  evidence_type: IDA
  original_reference_id: PMID:17289584
  review:
    summary: 'Manual review: histone binding is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0042393
    label: histone binding
  evidence_type: IDA
  original_reference_id: PMID:21348863
  review:
    summary: 'Manual review: histone binding is consistent with known biology of NAP1.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
references:
- id: GO_REF:0000002
  title: Gene Ontology annotation through association of InterPro records with GO terms
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000043
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning models
  findings: []
- id: GO_REF:0000120
  title: Combined Automated Annotation using Multiple IEA Methods
  findings: []
- id: PMID:10688190
  title: A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae.
  findings: []
- id: PMID:11805837
  title: Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.
  findings: []
- id: PMID:12058072
  title: Cell cycle-dependent assembly of a Gin4-septin complex.
  findings: []
- id: PMID:12456659
  title: A role for nucleosome assembly protein 1 in the nuclear transport of histones H2A and H2B.
  findings: []
- id: PMID:13680156
  title: Saccharomyces cerevisiae Ats1p interacts with Nap1p, a cytoplasmic protein that controls bud morphogenesis.
  findings: []
- id: PMID:1400414
  title: Functional analysis of nucleosome assembly protein, NAP-1. The negatively charged COOH-terminal region is not necessary for the intrinsic assembly activity.
  findings: []
- id: PMID:14645854
  title: ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex.
  findings: []
- id: PMID:14759368
  title: High-definition macromolecular composition of yeast RNA-processing complexes.
  findings: []
- id: PMID:15045029
  title: A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin.
  findings: []
- id: PMID:16299494
  title: A phosphatase complex that dephosphorylates gammaH2AX regulates DNA damage checkpoint recovery.
  findings: []
- id: PMID:16429126
  title: Proteome survey reveals modularity of the yeast cell machinery.
  findings: []
- id: PMID:16432217
  title: The structure of nucleosome assembly protein 1.
  findings: []
- id: PMID:16492771
  title: Chromatin remodeling by nucleosome disassembly in vitro.
  findings: []
- id: PMID:16554755
  title: Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.
  findings: []
- id: PMID:17289584
  title: Chz1, a nuclear chaperone for histone H2AZ.
  findings: []
- id: PMID:18467557
  title: An in vivo map of the yeast protein interactome.
  findings: []
- id: PMID:18719252
  title: High-quality binary protein interaction map of the yeast interactome network.
  findings: []
- id: PMID:19172749
  title: Histone chaperone specificity in Rtt109 activation.
  findings: []
- id: PMID:19536198
  title: 'An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell.'
  findings: []
- id: PMID:2016313
  title: Identification and molecular cloning of yeast homolog of nucleosome assembly protein I which facilitates nucleosome assembly in vitro.
  findings: []
- id: PMID:20489023
  title: A global protein kinase and phosphatase interaction network in yeast.
  findings: []
- id: PMID:21179020
  title: Defining the budding yeast chromatin-associated interactome.
  findings: []
- id: PMID:21348863
  title: Assembly states of the nucleosome assembly protein 1 (NAP-1) revealed by sedimentation velocity and non-denaturing MS.
  findings: []
- id: PMID:22308335
  title: Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.
  findings: []
- id: PMID:23468594
  title: A safeguard mechanism regulates Rho GTPases to coordinate cytokinesis with the establishment of cell polarity.
  findings: []
- id: PMID:25416945
  title: A memory system of negative polarity cues prevents replicative aging.
  findings: []
- id: PMID:27225933
  title: Structural evidence for Nap1-dependent H2A-H2B deposition and nucleosome assembly.
  findings: []
- id: PMID:30341817
  title: Septin-associated proteins Aim44 and Nis1 traffic between the bud neck and the nucleus in the yeast Saccharomyces cerevisiae.
  findings: []
- id: PMID:31062022
  title: Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME.
  findings: []
- id: PMID:37968396
  title: The social and structural architecture of the yeast protein interactome.
  findings: []
- id: PMID:39601790
  title: Nap1 and Kap114 co-chaperone H2A-H2B and facilitate targeted histone release in the nucleus.
  findings: []
- id: PMID:7622566
  title: Members of the NAP/SET family of proteins interact specifically with B-type cyclins.
  findings: []
- id: PMID:7622567
  title: NAP1 acts with Clb1 to perform mitotic functions and to suppress polar bud growth in budding yeast.
  findings: []
- id: PMID:9214386
  title: Control of mitotic events by Nap1 and the Gin4 kinase.
  findings: []
- id: PMID:9813092
  title: The septins are required for the mitosis-specific activation of the Gin4 kinase.
  findings: []