PHO86

UniProt ID: P46956
Organism: Saccharomyces cerevisiae
Review Status: DRAFT
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Gene Description

TODO: Add description for PHO86

Existing Annotations Review

GO Term Evidence Action Reason
GO:0006817 phosphate ion transport
IEA
GO_REF:0000043
ACCEPT
Summary: Manual review: phosphate ion transport is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0016020 membrane
IEA
GO_REF:0000044
ACCEPT
Summary: Manual review: membrane is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0005515 protein binding
IPI
PMID:16429126
Proteome survey reveals modularity of the yeast cell machine...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for PHO86.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:18467557
An in vivo map of the yeast protein interactome.
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for PHO86.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:27107014
An inter-species protein-protein interaction network across ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for PHO86.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005515 protein binding
IPI
PMID:37968396
The social and structural architecture of the yeast protein ...
MARK AS OVER ANNOTATED
Summary: Manual review: protein binding is too generic or over-extended for PHO86.
Reason: Marked over-annotated because more specific terms capture the biology more accurately.
GO:0005783 endoplasmic reticulum
HDA
PMID:26928762
One library to make them all: streamlining the creation of y...
ACCEPT
Summary: Manual review: endoplasmic reticulum is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0005783 endoplasmic reticulum
IDA
PMID:10655492
Pho86p, an endoplasmic reticulum (ER) resident protein in Sa...
ACCEPT
Summary: Manual review: endoplasmic reticulum is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0006457 protein folding
IMP
PMID:15623581
Specialized membrane-localized chaperones prevent aggregatio...
ACCEPT
Summary: Manual review: protein folding is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
IMP
PMID:10655492
Pho86p, an endoplasmic reticulum (ER) resident protein in Sa...
ACCEPT
Summary: Manual review: endoplasmic reticulum to Golgi vesicle-mediated transport is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0010966 regulation of phosphate transport
IMP
PMID:10655492
Pho86p, an endoplasmic reticulum (ER) resident protein in Sa...
ACCEPT
Summary: Manual review: regulation of phosphate transport is consistent with known biology of PHO86.
Reason: Retained as supported or plausible for this gene and evidence context.
GO:0051082 unfolded protein binding
IMP
PMID:15623581
Specialized membrane-localized chaperones prevent aggregatio...
MODIFY
Summary: Manual review: unfolded protein binding is better represented by a more specific replacement term for PHO86.
Reason: Modified to align with current curation guidance and improve term specificity.
Proposed replacements: protein folding chaperone

References

Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Pho86p, an endoplasmic reticulum (ER) resident protein in Saccharomyces cerevisiae, is required for ER exit of the high-affinity phosphate transporter Pho84p.
Specialized membrane-localized chaperones prevent aggregation of polytopic proteins in the ER.
Proteome survey reveals modularity of the yeast cell machinery.
An in vivo map of the yeast protein interactome.
One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy.
An inter-species protein-protein interaction network across vast evolutionary distance.
The social and structural architecture of the yeast protein interactome.

📄 View Raw YAML

id: P46956
gene_symbol: PHO86
product_type: PROTEIN
status: DRAFT
taxon:
  id: NCBITaxon:559292
  label: Saccharomyces cerevisiae
description: 'TODO: Add description for PHO86'
existing_annotations:
- term:
    id: GO:0006817
    label: phosphate ion transport
  evidence_type: IEA
  original_reference_id: GO_REF:0000043
  review:
    summary: 'Manual review: phosphate ion transport is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0016020
    label: membrane
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  review:
    summary: 'Manual review: membrane is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:16429126
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for PHO86.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:18467557
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for PHO86.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:27107014
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for PHO86.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:37968396
  review:
    summary: 'Manual review: protein binding is too generic or over-extended for PHO86.'
    action: MARK_AS_OVER_ANNOTATED
    reason: Marked over-annotated because more specific terms capture the biology more accurately.
- term:
    id: GO:0005783
    label: endoplasmic reticulum
  evidence_type: HDA
  original_reference_id: PMID:26928762
  review:
    summary: 'Manual review: endoplasmic reticulum is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0005783
    label: endoplasmic reticulum
  evidence_type: IDA
  original_reference_id: PMID:10655492
  review:
    summary: 'Manual review: endoplasmic reticulum is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0006457
    label: protein folding
  evidence_type: IMP
  original_reference_id: PMID:15623581
  review:
    summary: 'Manual review: protein folding is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0006888
    label: endoplasmic reticulum to Golgi vesicle-mediated transport
  evidence_type: IMP
  original_reference_id: PMID:10655492
  review:
    summary: 'Manual review: endoplasmic reticulum to Golgi vesicle-mediated transport is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0010966
    label: regulation of phosphate transport
  evidence_type: IMP
  original_reference_id: PMID:10655492
  review:
    summary: 'Manual review: regulation of phosphate transport is consistent with known biology of PHO86.'
    action: ACCEPT
    reason: Retained as supported or plausible for this gene and evidence context.
- term:
    id: GO:0051082
    label: unfolded protein binding
  evidence_type: IMP
  original_reference_id: PMID:15623581
  review:
    summary: 'Manual review: unfolded protein binding is better represented by a more specific replacement term for PHO86.'
    action: MODIFY
    reason: Modified to align with current curation guidance and improve term specificity.
    proposed_replacement_terms:
    - id: GO:0044183
      label: protein folding chaperone
references:
- id: GO_REF:0000043
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
  findings: []
- id: PMID:10655492
  title: Pho86p, an endoplasmic reticulum (ER) resident protein in Saccharomyces cerevisiae, is required for ER exit of the high-affinity phosphate transporter Pho84p.
  findings: []
- id: PMID:15623581
  title: Specialized membrane-localized chaperones prevent aggregation of polytopic proteins in the ER.
  findings: []
- id: PMID:16429126
  title: Proteome survey reveals modularity of the yeast cell machinery.
  findings: []
- id: PMID:18467557
  title: An in vivo map of the yeast protein interactome.
  findings: []
- id: PMID:26928762
  title: 'One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy.'
  findings: []
- id: PMID:27107014
  title: An inter-species protein-protein interaction network across vast evolutionary distance.
  findings: []
- id: PMID:37968396
  title: The social and structural architecture of the yeast protein interactome.
  findings: []