TDH1

UniProt ID: P00360
Organism: Saccharomyces cerevisiae S288C
Review Status: DRAFT
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Gene Description

Glyceraldehyde-3-phosphate dehydrogenase 1 (Tdh1, YJL052W) is one of three paralogous NAD+-dependent phosphorylating glyceraldehyde-3-phosphate dehydrogenases (GAPDH, EC 1.2.1.12; TDH1, TDH2, TDH3) of Saccharomyces cerevisiae. These homotetrameric enzymes catalyse the reversible oxidative phosphorylation of D-glyceraldehyde 3-phosphate to 1,3-bisphosphoglycerate with reduction of NAD+ to NADH, the sixth step of glycolysis and an obligatory step of gluconeogenesis. Tdh1 is the minor isoform, contributing about 10-15% of cellular GAPDH activity in exponentially growing cells; its expression rises in stationary phase, on glucose starvation and after heat shock, and the polypeptide is readily detected only in stationary-phase cells. Tdh1 is cytosolic, and like its paralogs is also found in cell-wall extracts, with minor pools co-purifying with mitochondria and lipid particles. A slow NAD(P)H-hydratase side activity is recorded for yeast GAPDH. During alcoholic fermentation S. cerevisiae secretes GAPDH-derived peptides that act as antimicrobial agents against wine-related yeasts and bacteria; these fragments are shared by the TDH1-3 products.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA from GAPDH node PTN000089475, seeded by the three yeast TDH paralogs among other experimentally characterised GAPDHs. TDH1 is an active NAD-dependent phosphorylating GAPDH, so the inherited activity is correct; TDH1 appearing among the donors reflects its own experimental grounding.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
The contribution of the TDH1, TDH2, and TDH3 gene products to the total glyceraldehyde-3-phosphate dehydrogenase activity in wild type cells is 10-15, 25-30, and 50-60%, respectively
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IDA
PMID:3905788
Differential expression of the three yeast glyceraldehyde-3-...
ACCEPT
Summary: McAlister and Holland used tdh insertion mutants to partition total GAPDH activity among the three genes; TDH1 encodes the minor (10-15%) isoform of cellular GAPDH activity and the authors conclude all three genes encode catalytically active enzyme.
Supporting Evidence:
PMID:3905788
The contribution of the TDH1, TDH2, and TDH3 gene products to the total glyceraldehyde-3-phosphate dehydrogenase activity in wild type cells is 10-15, 25-30, and 50-60%, respectively
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
IEA
GO_REF:0000120
ACCEPT
Summary: EC 1.2.1.12 / RHEA:10300 mapping from the UniProt catalytic-activity annotation; correct for TDH1.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA (GLUCFERMEN-PWY, superpathway of glucose fermentation) assigning the reversible GAP + NAD+ + Pi <-> 1,3-bisphosphoglycerate step (EC 1.2.1.12) to TDH1; the activity is experimentally established for TDH1.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA (GLUCONEO-PWY-1, gluconeogenesis I) assigning the reversible GAP + NAD+ + Pi <-> 1,3-bisphosphoglycerate step (EC 1.2.1.12) to TDH1; the activity is experimentally established for TDH1.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA (GLYCOLYSIS, glycolysis I) assigning the reversible GAP + NAD+ + Pi <-> 1,3-bisphosphoglycerate step (EC 1.2.1.12) to TDH1; the activity is experimentally established for TDH1.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: UniProt subcellular-location mapping (SL-0086 Cytoplasm); correct for TDH1, which is detected in cytosolic extracts.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
GO:0005739 mitochondrion
HDA
PMID:24769239
Quantitative variations of the mitochondrial proteome and ph...
KEEP AS NON CORE
Summary: High-throughput mitochondrial proteomics detected TDH1 in purified mitochondria. Abundant glycolytic enzymes are frequent co-purifying passengers of mitochondrial preparations, although a genuine outer-surface pool exists (PMID:16962558).
Reason: HTP proteomic detection; peripheral, non-core.
Supporting Evidence:
PMID:24769239
we performed an overall quantitative proteomic and phosphoproteomic study of isolated mitochondria extracted from yeast grown on fermentative (glucose or galactose) and respiratory (lactate) media
PMID:16962558
we show that all glycolytic enzymes are associated with mitochondria in yeast
GO:0005739 mitochondrion
IDA
PMID:16962558
Enolase takes part in a macromolecular complex associated to...
KEEP AS NON CORE
Summary: Brandina et al. report that all glycolytic enzyme activities, including GAPDH, are partly associated with purified mitochondria and that glycolytic enzymes co-purify with an enolase-containing complex at the mitochondrial surface. This is a peripheral association of a small pool of TDH1; the abstract does not resolve individual TDH isoforms, but the curator had full text.
Reason: Experimental, not removed; peripheral pool, not the site of core glycolytic activity.
Supporting Evidence:
PMID:16962558
we show that all glycolytic enzymes are associated with mitochondria in yeast
PMID:16962558
The identified components included additional glycolytic enzymes
GO:0005739 mitochondrion
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA mapping to mitochondrion for GAPDH. Consistent with experimental detection of a peripheral (outer-surface) mitochondria-associated pool of GAPDH, but this is condition-dependent and not the site of core activity.
Reason: Peripheral location propagated electronically; non-core.
Supporting Evidence:
PMID:16962558
we show that all glycolytic enzymes are associated with mitochondria in yeast
GO:0005739 mitochondrion
IPI
PMID:16962558
Enolase takes part in a macromolecular complex associated to...
KEEP AS NON CORE
Summary: IPI with ENO2: Brandina et al. co-immunoprecipitated glycolytic enzymes with anti-enolase antibodies from mitochondria, placing GAPDH in an enolase-containing complex on the mitochondrial surface. IPI is an unusual code for a location, but the observation supports a peripheral mitochondria-associated pool.
Reason: Experimental, peripheral mitochondrial association; non-core.
Supporting Evidence:
PMID:16962558
enolase takes part in a large macromolecular complex associated to mitochondria
PMID:16962558
The identified components included additional glycolytic enzymes
GO:0005739 mitochondrion
IPI
PMID:16962558
Enolase takes part in a macromolecular complex associated to...
KEEP AS NON CORE
Summary: IPI with ENO1: Brandina et al. co-immunoprecipitated glycolytic enzymes with anti-enolase antibodies from mitochondria, placing GAPDH in an enolase-containing complex on the mitochondrial surface. IPI is an unusual code for a location, but the observation supports a peripheral mitochondria-associated pool.
Reason: Experimental, peripheral mitochondrial association; non-core.
Supporting Evidence:
PMID:16962558
enolase takes part in a large macromolecular complex associated to mitochondria
PMID:16962558
The identified components included additional glycolytic enzymes
GO:0005811 lipid droplet
IDA
PMID:10515935
Identification and characterization of major lipid particle ...
KEEP AS NON CORE
Summary: Athenstaedt et al. identified GAPDH by MS as a minor component in a gel band of highly purified lipid particles (less abundant than Yju3p). A minor co-purifying pool of an abundant cytosolic enzyme; no role at lipid droplets is described.
Reason: Experimental but minor co-fractionation; non-core.
Supporting Evidence:
PMID:10515935
glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and Yju3p (the amount of Yju3p was greater than GAPDH)
GO:0005811 lipid droplet
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA rule propagating lipid droplet location to GAPDHs, derived from proteomic detection of GAPDH in lipid-particle fractions; consistent with the experimental row but a minor co-fractionating pool, not a characteristic location.
Reason: Minor co-fractionation location; non-core.
Supporting Evidence:
PMID:10515935
glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and Yju3p (the amount of Yju3p was greater than GAPDH)
GO:0005829 cytosol
HDA
PMID:26928762
One library to make them all: streamlining the creation of y...
ACCEPT
Summary: SWAT-GFP library imaging (Meurer/Weill et al.) assigned TDH1 to the cytosol; consistent with its glycolytic role.
Supporting Evidence:
PMID:26928762
we only assigned localizations that could be easily discriminated by eye: ER, nuclear periphery, cytosol, cell periphery, vacuole lumen, vacuole membrane, mitochondria, nucleus, bud/bud neck and punctate
GO:0005829 cytosol
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA is_active_in cytosol for glycolytic GAPDHs; correct for TDH1.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
GO:0005829 cytosol
IDA
PMID:11158358
The glyceraldehyde-3-phosphate dehydrogenase polypeptides en...
ACCEPT
Summary: Delgado et al. detected Tdh1 polypeptide by Western blot in cytosolic extracts of stationary-phase cells; cytosol is the site of GAPDH activity.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
GO:0005829 cytosol
IEA
GO_REF:0000117
ACCEPT
Summary: ARBA mapping to cytosol; correct for TDH1.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
GO:0005829 cytosol
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA is_active_in cytosol for the GAPDH step of superpathway of glucose fermentation; TDH1 is a soluble cytosolic glycolytic/gluconeogenic enzyme.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0005829 cytosol
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA is_active_in cytosol for the GAPDH step of gluconeogenesis I; TDH1 is a soluble cytosolic glycolytic/gluconeogenic enzyme.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0005829 cytosol
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA is_active_in cytosol for the GAPDH step of glycolysis I; TDH1 is a soluble cytosolic glycolytic/gluconeogenic enzyme.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0005886 plasma membrane
HDA
PMID:16622836
The plasma membrane proteome of Saccharomyces cerevisiae and...
KEEP AS NON CORE
Summary: Delom et al. identified ~90 proteins in a stripped plasma-membrane fraction by IEC/LDS-PAGE MS, including TDH1. Abundant glycolytic enzymes are common contaminants of membrane fractions, although yeast GAPDH is also found at the cell surface/cell wall (PMID:11158358).
Reason: HTP proteomic detection; plausible peripheral pool, non-core.
Supporting Evidence:
PMID:16622836
Proteins from a stripped plasma membrane fraction were solubilized with the neutral and non-denaturing detergent, the n-dodecyl beta-D-maltoside.
PMID:11158358
By immunoelectron microscopy, the GAPDH protein was detected at the outer surface of the cell wall of wild-type cells, as well as in the cytoplasm
GO:0006006 glucose metabolic process
IEA
GO_REF:0000002
TOO GENERAL
Summary: InterPro IPR006424 (type I GAPDH) mapping to glucose metabolic process. Correct but very general; the specific processes glycolysis and gluconeogenesis are annotated separately.
Reason: Correct, general parent-level process; redundant with glycolysis/gluconeogenesis.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0006094 gluconeogenesis
IEA
GO_REF:0000117
ACCEPT
Summary: ARBA mapping to gluconeogenesis. GAPDH catalyses the reversible step used in both glycolysis and gluconeogenesis, and TDH1 is expressed on ethanol as well as glucose.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
The relative proportions of expression of each gene is the same in cells grown in the presence of glucose or ethanol as carbon source
GO:0006094 gluconeogenesis
IEP
PMID:3905788
Differential expression of the three yeast glyceraldehyde-3-...
ACCEPT
Summary: McAlister and Holland measured TDH1 expression/activity in ethanol-grown (gluconeogenic) as well as glucose-grown cells. IEP is weak evidence for participation, but the reversible GAPDH step is an obligatory part of gluconeogenesis, so the process assignment is correct.
Supporting Evidence:
PMID:3905788
The relative proportions of expression of each gene is the same in cells grown in the presence of glucose or ethanol as carbon source
GO:0006094 gluconeogenesis
RCA
GO_REF:0000123
ACCEPT
Summary: YeastPathways RCA (gluconeogenesis I) for TDH1; the GAPDH step operates in the gluconeogenic direction during growth on non-fermentable carbon sources.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
The relative proportions of expression of each gene is the same in cells grown in the presence of glucose or ethanol as carbon source
GO:0006096 glycolysis
IBA
GO_REF:0000033
ACCEPT
Summary: PAINT IBA for glycolysis from the GAPDH clade; TDH1 contributes the minor (10-15%) isoform of the glycolytic GAPDH activity.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
glyceraldehyde 3-phosphate: step 1/5. {ECO:0000269|PubMed:3905788}.
PMID:3905788
The contribution of the TDH1, TDH2, and TDH3 gene products to the total glyceraldehyde-3-phosphate dehydrogenase activity in wild type cells is 10-15, 25-30, and 50-60%, respectively
GO:0006096 glycolysis
IEA
GO_REF:0000120
ACCEPT
Summary: UniPathway UPA00109 / ARBA mapping to glycolysis; correct for TDH1.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
glyceraldehyde 3-phosphate: step 1/5. {ECO:0000269|PubMed:3905788}.
GO:0006096 glycolysis
IEP
PMID:3905788
Differential expression of the three yeast glyceraldehyde-3-...
ACCEPT
Summary: McAlister and Holland: total GAPDH activity is 2-fold higher in glucose-grown cells, and TDH1 supplies the minor (10-15%) isoform of it. IEP is indirect, but the glycolytic role of TDH1 is well established.
Supporting Evidence:
PMID:3905788
The contribution of the TDH1, TDH2, and TDH3 gene products to the total glyceraldehyde-3-phosphate dehydrogenase activity in wild type cells is 10-15, 25-30, and 50-60%, respectively
PMID:3905788
The relative proportions of expression of each gene is the same in cells grown in the presence of glucose or ethanol as carbon source
GO:0009277 fungal-type cell wall
IDA
PMID:11158358
The glyceraldehyde-3-phosphate dehydrogenase polypeptides en...
KEEP AS NON CORE
Summary: Delgado et al. detected catalytically active GAPDH at the outer surface of the cell wall by immunofluorescence, immuno-EM and Western blotting of cell-wall extracts; TDH1 polypeptide was specifically detected in cell-wall extracts.
Reason: Experimentally supported secondary (moonlighting) location; function there unknown.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
PMID:11158358
By immunoelectron microscopy, the GAPDH protein was detected at the outer surface of the cell wall of wild-type cells, as well as in the cytoplasm
GO:0009277 fungal-type cell wall
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA mapping to fungal-type cell wall; consistent with direct experimental detection of TDH1 in cell-wall extracts.
Reason: Secondary location, non-core.
Supporting Evidence:
PMID:11158358
Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
IEA
GO_REF:0000002
MODIFY
Summary: InterPro GAPDH signatures mapped to the generic parent oxidoreductase activity acting on aldehyde/oxo donors with NAD(P) acceptor. Correct but uninformative; the specific child term GAPDH (NAD+) (phosphorylating) activity is supported.
Reason: Too general; replace with the specific activity.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
PMID:3905788
These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
GO:0019658 bifid shunt
RCA
GO_REF:0000123
REMOVE
Summary: YeastPathways RCA from GLUCFERMEN-PWY mapped to GO bifid shunt, the Bifidobacterium phosphoketolase pathway converting glucose to lactate and acetate. S. cerevisiae has no bifid shunt; TDH1 acts in glycolysis/alcoholic fermentation.
Reason: Mis-mapped pathway: bifid shunt does not occur in S. cerevisiae.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
glyceraldehyde 3-phosphate: step 1/5. {ECO:0000269|PubMed:3905788}.
GO:0050661 NADP binding
IEA
GO_REF:0000002
MARK AS OVER ANNOTATED
Summary: InterPro IPR006424 (type I GAPDH family, which includes NADP-dependent plant/cyanobacterial GapB/GapC) mapped to NADP binding. Yeast TDH1 is the NAD+-specific phosphorylating GAPDH (EC 1.2.1.12); the only NADP(H) interaction recorded is a slow NAD(P)H-hydratase side activity, so NADP binding is not a meaningful functional description.
Reason: Family-level mapping that over-states cofactor specificity of an NAD-dependent GAPDH.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
FUNCTION: As a side activity, catalyzes the hydration of the
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0051287 NAD binding
IEA
GO_REF:0000002
KEEP AS NON CORE
Summary: InterPro GAPDH NAD(P)-binding domain mapped to NAD binding; correct, NAD+ is the cosubstrate of TDH1. Part of the catalytic activity rather than a separate function.
Reason: Cosubstrate binding; non-core.
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
GO:0061620 obsolete glycolytic process through glucose-6-phosphate
RCA
GO_REF:0000123
MODIFY
Summary: YeastPathways RCA (GLYCOLYSIS) to glycolytic process through glucose-6-phosphate, now obsolete and replaced by glycolysis (GO:0006096). TDH1 does act in glycolysis.
Reason: Obsolete term; use replaced_by GO:0006096.
Proposed replacements: glycolysis
Supporting Evidence:
file:yeast/TDH1/TDH1-uniprot.txt
glyceraldehyde 3-phosphate: step 1/5. {ECO:0000269|PubMed:3905788}.
GO:1904408 melatonin binding
IDA
PMID:31708896
Glycolytic Proteins Interact With Intracellular Melatonin in...
MARK AS OVER ANNOTATED
Summary: Morcillo-Parra et al. immunopurified melatonin-associated proteins from fermenting cells with anti-melatonin IgG beads and identified Tdh1/2/3 by MS in one gel band. This is an affinity co-purification without a defined binding site, stoichiometry or physiological effect on TDH1.
Reason: Affinity co-purification of abundant GAPDH paralogs is weak support for a specific melatonin-binding activity; the experimental report is retained but likely overstates a physiologic molecular function.
Supporting Evidence:
PMID:31708896
Surprisingly, most of the proteins identified participate in the glycolytic pathway: pyruvate kinase 1 (Pyk2p; band a), enolase (Eno1p, Eno2p; band c), fructose biphosphate aldolase (Fba1p; band d), and glyceraldehyde-3-phosphate dehydrogenase (Tdh1p, Tdh2p, Tdh3p; band f).
PMID:31708896
We subsequently performed immunopurification melatonin-IgG-Dynabeads and identified a set of proteins that interact with melatonin inside the cell.
GO:1904408 melatonin binding
IEA
GO_REF:0000117
MARK AS OVER ANNOTATED
Summary: ARBA rule propagating melatonin binding to GAPDHs, derived from a single affinity pull-down study in yeast that did identify this protein; physiological significance is unknown.
Reason: ARBA propagates the same weak affinity-capture result as a molecular-function assertion; the interaction lacks a binding constant, site, or demonstrated physiologic effect.
Supporting Evidence:
PMID:31708896
We subsequently performed immunopurification melatonin-IgG-Dynabeads and identified a set of proteins that interact with melatonin inside the cell.

Core Functions

NAD+-dependent phosphorylating glyceraldehyde-3-phosphate dehydrogenase catalysing the reversible conversion of D-glyceraldehyde 3-phosphate + Pi + NAD+ to 1,3-bisphosphoglycerate + NADH in the cytosol, operating in the glycolytic direction on glucose and the gluconeogenic direction on non-fermentable carbon sources.

Supporting Evidence:
  • file:yeast/TDH1/TDH1-uniprot.txt
    Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) involved in
  • PMID:3905788
    The contribution of the TDH1, TDH2, and TDH3 gene products to the total glyceraldehyde-3-phosphate dehydrogenase activity in wild type cells is 10-15, 25-30, and 50-60%, respectively
  • PMID:3905788
    These data confirm that the three yeast glyceraldehyde-3-phosphate dehydrogenase genes encode catalytically active enzyme
  • PMID:11158358
    Tdh1 is only detected in stationary-phase cells, again in both cytosol and cell wall extracts

References

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Suggested Questions for Experts

Q: Does stationary-phase Tdh1 have a distinct role (e.g. in quiescence or stress survival) beyond supplementing GAPDH activity, given that its expression is uncoupled from Tdh2/Tdh3?

Suggested Experiments

Experiment: Compare chronological lifespan and stress survival of tdh1 single mutants and strains in which TDH1 is replaced by TDH2/TDH3 coding sequence under the TDH1 promoter, to test isoform-specific versus dosage roles.

Deep Research

SGD

(TDH1-deep-research-sgd.md)
SGD gene description for TDH1 (yeast) SGD

SGD gene description for TDH1 (yeast)

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria

πŸ“š Additional Documentation

Notes

(TDH1-notes.md)

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