Carnitine shuttleMetabolic Pathwaycarnitine_shuttle
Four-component carnitine shuttle for mitochondrial long-chain fatty-acid import, grounded to the human proteins SLC22A5/OCTN2 (UniProtKB:O76082, GO:0015226), CPT1A (P50416, GO:0004095, EC 2.3.1.21), SLC25A20/CACT (O43772, GO:0015227) and CPT2 (P23786, GO:0004095, EC 2.3.1.21). GO molecular-function/cellular-component terms were taken from the human GOA records; Reactome reaction ids and titles were verified against the local reactome cache. Each step uses a PANTHER family selector (generic over paralogs and orthologs) plus a concrete human representative member; CPT1A and CPT2 both belong to the carnitine O-acyltransferase family (PTHR22589), which also includes the tissue-specific CPT1B/CPT1C isoforms and the medium/short-chain and peroxisomal carnitine acyltransferases CRAT and CROT (not modelled here). Downstream, the regenerated matrix long-chain acyl-CoA enters mitochondrial fatty-acid beta-oxidation (GO:0006635; see the fatty_acid_beta_oxidation module).
Connections
SLC22A5 supplies the cytosolic L-carnitine that CPT1 uses to acylate long-chain acyl-CoA.
Acylcarnitine made by CPT1 is imported into the matrix by SLC25A20.
Matrix acylcarnitine delivered by SLC25A20 is converted back to acyl-CoA by CPT2.
Free carnitine released by CPT2 is exported by SLC25A20 (the antiport counter-substrate), recycling carnitine and closing the shuttle.
Part 1: cellular carnitine uptake (supplies the carnitine pool)
L-carnitine import across the plasma membrane (Na+-dependent)Transport Stepslc22a5_step
Annotons
SLC22A5/OCTN2: Na+-dependent carnitine transporter
slc22a5_activity
Participant: Family: Solute carrier family 22 (organic cation/carnitine transporter, OCTN) (SLC22A5)
Family:
Solute carrier family 22 (organic cation/carnitine transporter, OCTN) (SLC22A5)PANTHER:PTHR24064
Function
carnitine transmembrane transporter activityGO:0015226
Substrates:
L-carnitine (extracellular)
sodium ion (cotransported)
Products:
L-carnitine (cytosol)
Locations
High-affinity, sodium-dependent plasma-membrane carnitine importer (also polyspecific for organic cations); supplies the cellular carnitine used by the shuttle and mediates renal carnitine reabsorption. Deficiency causes primary (systemic) carnitine deficiency.
Part 2: committed, rate-limiting acyl transfer to carnitine (outer membrane)
long-chain acyl-CoA + L-carnitine to long-chain acylcarnitine + CoAReactioncpt1_step
Annotons
CPT1A: carnitine palmitoyltransferase 1 (liver)
cpt1a_activity
Participant: Family: Carnitine O-acyltransferase family (CPT1/CPT2/CRAT/CROT)
Function
carnitine O-palmitoyltransferase activityGO:0004095
Substrates:
long-chain acyl-CoA
L-carnitine
Products:
long-chain O-acylcarnitine
coenzyme A
Locations
Committed, rate-limiting step of long-chain fatty-acid oxidation, allosterically inhibited by malonyl-CoA (linking to lipogenesis). Converts acyl-CoA to acylcarnitine on the outer membrane. Deficiency causes CPT1A deficiency (hypoketotic hypoglycemia). Muscle/brain use the CPT1B/CPT1C isoforms.
Part 3: acylcarnitine/carnitine antiport across the inner membrane
acylcarnitine (cytosolic) / carnitine (matrix) antiportTransport Stepslc25a20_step
Annotons
SLC25A20/CACT: carnitine-acylcarnitine translocase
slc25a20_activity
Participant: Family: Mitochondrial carnitine/acylcarnitine carrier family (SLC25A20)
Function
O-acyl-L-carnitine transmembrane transporter activityGO:0015227
Substrates:
long-chain acylcarnitine (intermembrane space)
L-carnitine (matrix)
Products:
long-chain acylcarnitine (matrix)
L-carnitine (intermembrane space)
Locations
Inner-membrane antiporter that imports acylcarnitine into the matrix in exchange for exporting the free carnitine released by CPT2, coupling the two CPT reactions. Deficiency causes carnitine-acylcarnitine translocase deficiency (severe neonatal FAO disorder).
Part 4: regeneration of matrix acyl-CoA (completes the shuttle)
long-chain acylcarnitine + CoA to long-chain acyl-CoA + L-carnitineReactioncpt2_step
Annotons
CPT2: carnitine palmitoyltransferase 2
cpt2_activity
Participant: Family: Carnitine O-acyltransferase family (CPT1/CPT2/CRAT/CROT)
Function
carnitine O-palmitoyltransferase activityGO:0004095
Substrates:
long-chain O-acylcarnitine (matrix)
coenzyme A
Products:
long-chain acyl-CoA
L-carnitine
Locations
Matrix-facing inner-membrane transferase that reverses the CPT1 reaction, regenerating long-chain acyl-CoA for beta-oxidation and releasing carnitine for recycling by SLC25A20. Deficiency causes CPT2 deficiency (myopathic form: exercise-induced rhabdomyolysis).