cGAS-STING nucleic-acid sensing signaling pathway module

A cGAS or cGAS-like receptor detects cytosolic nucleic acid and synthesises a cyclic-dinucleotide second messenger that activates the ER adaptor STING; activated STING traffics to the ERGIC/Golgi and engages TBK1-family kinase signalling, which drives an innate immune transcriptional output. In vertebrates cGAS senses double-stranded DNA and the output is IRF3-dependent type I interferon; in Drosophila cGLR1 senses double-stranded RNA and the output is the NF-kappaB factor Relish.

MODULE:cgas_sting_signalingDRAFTSignaling Pathwaymodules/cgas_sting_signaling.yaml
cGAS/STING signaling pathwayGO:0140896
GO:0140896
cGAS/STING signaling pathway
The module is grounded in the GO biological process term for the cGAS/STING signaling pathway.
gomodel:64c3044100001129
cGAS-STING signaling in the cytosol (Human)
Production human GO-CAM (cached under gocams/64c3044100001129/) modelling the canonical cytosolic axis: CGAS dsDNA binding (GO:0003690), CGAS molecular condensate scaffold activity (GO:0140693), CGAS 2',3'-cyclic GMP-AMP synthase activity (GO:0061501), STING1 signaling adaptor activity (GO:0035591), and TBK1 protein serine/threonine kinase activity (GO:0004674) driving positive regulation of type I interferon production (GO:0032481).
gomodel:5f46c3b700001570
SPModule TBK1-IRF3 (Human)
Production human GO-CAM (cached under gocams/5f46c3b700001570/) modelling TBK1 kinase activity acting on IRF3, whose DNA-binding transcription activator activity (GO:0001216) and sequence-specific DNA binding (GO:0043565) drive the interferon transcriptional output.
gomodel:613aae0000000040
cGAS-Sting pathway (Drosophila)
Production Drosophila GO-CAM (cached under gocams/613aae0000000040/) modelling cGlr1 double-stranded RNA binding (GO:0003725) and 3',2'-cyclic GMP-AMP synthase activity (GO:0140700), cGlr2 cyclic GMP-AMP synthase activities, Sting 2',3'- and 3',2'-cyclic GMP-AMP binding (GO:0061507, GO:0140704), and Relish RNA polymerase II-specific DNA-binding transcription factor activity (GO:0000981) in defense response to virus (GO:0051607). It grounds the Drosophila variants and representatives.
PMID:34965418
Orally acquired cyclic dinucleotides drive dSTING-dependent antiviral immunity in enterocytes.
Cached full text reports that protection conferred by orally acquired bacterial cyclic dinucleotides in Drosophila is dSTING- and dTBK1-dependent and leads to NF-kappaB-dependent gene expression; grounds fly IKKepsilon (dTBK1) as the Drosophila representative of the STING-engaged kinase role.
PANTHER:PTHR34339
STIMULATOR OF INTERFERON GENES PROTEIN (STING family)
Local PANTHER family for STING; grounds the animal-spanning STING adaptor exemplars (human Q86WV6, zebrafish E7F4N7, Drosophila A0A0B4LFY9, Pacific oyster P0DUE1, Nematostella A7SLZ2, Stylophora coral A0A2B4SJD2). Accessions taken from the family's cached InterPro/PANTHER member list.
PANTHER:PTHR10656
ITPRIP/mab-21 nucleotidyltransferase (cGAS/cGLR-containing family)
Local PANTHER family containing vertebrate cGAS (subfamily SF35) and the invertebrate cGAS-like receptors (cGLRs; subfamily SF42) used as the cGAS/cGLR sensor exemplars (human Q8N884, Drosophila A1ZA55/A8DYP7, Nematostella A7SFB5, Hydra A0A8B6XWW9). The family also contains non-immune Mab-21/ITPRIP members, so it is cited as the containing family rather than asserted as the sensor role's grounding term.
PANTHER:PTN000540338
PAINT node PTN000540338 for TBK1
Local PAINT IBD node in PTHR22969 with propagated terms P:GO:0002218, P:GO:0032481; TBK1 (UniProtKB:Q9UHD2) appears among the IBD seeds; PAINT date 20240321.
PANTHER:PTN001491808
PAINT node PTN001491808 for TBK1
Local PAINT IBD node in PTHR22969 with propagated terms C:GO:0005737, F:GO:0004674; TBK1 (UniProtKB:Q9UHD2) appears among the IBD seeds; PAINT date 20260601.

Curated compact signaling-pathway module for the cytosolic DNA-sensing cGAS-STING axis, grounded in verified human UniProt exemplar accessions (CGAS Q8N884, STING1 Q86WV6, TBK1 Q9UHD2, IRF3 Q14653), GO molecular-function/process terms confirmed against the cached production GO-CAM gomodel:64c3044100001129, and local PAINT IBD rows for TBK1. The IRF3-centred type I interferon output is the modelled effector branch; STING1's post-Golgi NF-kappaB branch is real but is left as context (see description) rather than modelled as a core step. TBK1 is grounded as a PANTHER family (PTHR22969) with PTN anchors because TBK1's accession appears in the local IBD seed rows; the other members are grounded by verified UniProt exemplar accessions. Animal-spanning exemplars are attached to the deeply conserved roles: the STING receptor and adaptor (PANTHER PTHR34339: human, zebrafish, Drosophila, Pacific oyster, Nematostella and Stylophora coral, i.e. vertebrate through cnidarian) and the cGAS/cGLR cyclic-dinucleotide synthase (PANTHER PTHR10656: human cGAS plus Drosophila, Nematostella and Hydra cGAS-like receptors). Every leaf role has a human representative and a Drosophila representative, either as a family representative member or as a Drosophila variant. The TBK1-family kinase role carries human TBK1 and fly IKKepsilon (dTBK1, FBgn0086657), which is an IBD seed of PAINT node PTN000540338 alongside human TBK1 and is required for dSTING-dependent antiviral gene expression (PMID:34965418); fly IKKbeta also acts downstream of dSTING (PMID:30119996) but is not modelled. The kinase annoton therefore asserts only the shared process (activation of innate immune response) and leaves type I interferon production to the vertebrate IRF3 variant. Two steps have no homologous fly counterpart and are modelled as variant sets instead of forcing a fly gene onto a human function: ligand sensing (vertebrate cGAS binds dsDNA; Drosophila cGLR1 binds dsRNA, and neither fly cGLR carries a DNA-binding annotation) and the effector transcription factor (vertebrate IRF3; Drosophila has no protein with the IRF DNA-binding domain, InterPro IPR001346, and uses the NF-kappaB factor Relish). The output variant set allows more than one branch because vertebrate STING also activates NF-kappaB; that vertebrate NF-kappaB branch is not modelled. All exemplar accessions were taken from the cached InterPro/PANTHER member lists or verified in UniProt. No provider deep-research report was generated for this module; structural claims rest on the GO-CAM models, GO terms, PANTHER families, PAINT rows, and cached papers cited above.

9Nodes
4Parts
2Variant Sets
4Variants
8Annotons
3Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:cgas_sting_signaling deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

10 gene-function check(s) reflected in core functions · 0 conflict(s) · 13 evidence or coverage gap(s) (23 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
cgas_cgamp_synthase CGAS (human, vertebrate cGAS; SF35)
UniProtKB:Q8N884
Family Representative
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
cgas_cgamp_synthase cGlr1 (Drosophila cGAS-like receptor 1; SF42)
UniProtKB:A1ZA55
Family Representative
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Annotation Supported
A retained annotation or curated replacement supports this function, but core_functions does not yet reflect it.
cgas_cgamp_synthase cGlr2 (Drosophila cGAS-like receptor 2; SF42)
UniProtKB:A8DYP7
Family Representative
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
cgas_cgamp_synthase cGAS/cGLR (Nematostella vectensis, cnidarian; SF42)
UniProtKB:A7SFB5
Family Representative
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
cgas_cgamp_synthase cGLR (Hydra vulgaris, cnidarian; SF42)
UniProtKB:A0A8B6XWW9
Family Representative
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
cgas_dsdna_sensor CGAS
UniProtKB:Q8N884
Gene
double-stranded DNA binding
GO:0003690
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
cglr1_dsrna_sensor cGlr1
UniProtKB:A1ZA55
Gene
double-stranded RNA binding
GO:0003725
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
sting_cgamp_receptor STING1 (human)
UniProtKB:Q86WV6
Family Representative
2',3'-cyclic GMP-AMP binding
GO:0061507
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
sting_cgamp_receptor Sting (Drosophila melanogaster)
UniProtKB:A0A0B4LFY9
Family Representative
2',3'-cyclic GMP-AMP binding
GO:0061507
Annotation Supported
A retained annotation or curated replacement supports this function, but core_functions does not yet reflect it.
sting_signaling_adaptor STING1 (human, vertebrate)
UniProtKB:Q86WV6
Family Representative
signaling adaptor activity
GO:0035591
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
sting_signaling_adaptor sting1 (zebrafish, teleost)
UniProtKB:E7F4N7
Family Representative
signaling adaptor activity
GO:0035591
Function Unreviewed
No retained annotation or core molecular function supports this GO assertion. Missing or broader evidence is a coverage gap, not proof the activity is absent.
sting_signaling_adaptor Sting (Drosophila melanogaster, insect)
UniProtKB:A0A0B4LFY9
Family Representative
signaling adaptor activity
GO:0035591
Function Unreviewed
No retained annotation or core molecular function supports this GO assertion. Missing or broader evidence is a coverage gap, not proof the activity is absent.
sting_signaling_adaptor STING (Magallana gigas, Pacific oyster; mollusc)
UniProtKB:P0DUE1
Family Representative
signaling adaptor activity
GO:0035591
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
sting_signaling_adaptor STING (Nematostella vectensis, sea anemone; cnidarian)
UniProtKB:A7SLZ2
Family Representative
signaling adaptor activity
GO:0035591
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
sting_signaling_adaptor STING1 (Stylophora pistillata, coral; cnidarian)
UniProtKB:A0A2B4SJD2
Family Representative
signaling adaptor activity
GO:0035591
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
tbk1_kinase TBK1 (human)
UniProtKB:Q9UHD2
Family Representative
protein serine/threonine kinase activity
GO:0004674
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
tbk1_kinase IKKepsilon / ik2 / dTBK1 (Drosophila melanogaster)
UniProtKB:Q9V3Y8
Family Representative
protein serine/threonine kinase activity
GO:0004674
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
irf3_transcription_factor IRF3
UniProtKB:Q14653
Gene
DNA-binding transcription activator activity
GO:0001216
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
relish_transcription_factor Rel
UniProtKB:Q94527
Gene
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000981
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
cgas_cgamp_synthase cGAS / cGAS-like nucleotidyltransferase (cGLR) sensor
Family
2',3'-cyclic GMP-AMP synthase activity
GO:0061501
Family Id Missing
The family has no identifier linking it to a curated family review.
sting_cgamp_receptor STING cyclic-dinucleotide receptor family/ortholog group
PANTHER:PTHR34339
Family
2',3'-cyclic GMP-AMP binding
GO:0061507
Family Review Missing
No supported structured family review is available for PANTHER:PTHR34339.
sting_signaling_adaptor STING signaling adaptor family/ortholog group
PANTHER:PTHR34339
Family
signaling adaptor activity
GO:0035591
Family Review Missing
No supported structured family review is available for PANTHER:PTHR34339.
tbk1_kinase TBK1/IKK-related kinase family/ortholog group
PANTHER:PTHR22969
Family
protein serine/threonine kinase activity
GO:0004674
Family Function Unreviewed
The family review has no applicable adjudication supporting or excluding GO:0004674.

Gene-review completeness (10/15 grounded genes reviewed)

8 complete review(s) · 6 with deep research · 5 missing review · 4 reviewed but lacking deep research

Gene Review Complete Deep research
STING1 (Stylophora pistillata, coral; cnidarian) A0A2B4SJD2 ✗ — —
cGLR (Hydra vulgaris, cnidarian; SF42) A0A8B6XWW9 ✗ — —
cGAS/cGLR (Nematostella vectensis, cnidarian; SF42) A7SFB5 ✗ — —
STING (Nematostella vectensis, sea anemone; cnidarian) A7SLZ2 ✗ — —
CGAS Q8N884 ✓ ✓ ✗
cGlr1 A1ZA55 ✓ ✓ ✓
cGlr2 A8DYP7 ✓ ✓ ✓
IKKepsilon Q9V3Y8 ✓ 34/36 ✓
IRF3 Q14653 ✓ 189/190 ✗
STING (Magallana gigas, Pacific oyster; mollusc) P0DUE1 ✗ — —
Rel Q94527 ✓ ✓ ✓
Sting A0A0B4LFY9 ✓ ✓ ✓
sting1 E7F4N7 ✓ ✓ ✗
STING1 Q86WV6 ✓ ✓ ✗
TBK1 Q9UHD2 ✓ ✓ ✓

Details

Context
cytosolGO:0005829 endoplasmic reticulumGO:0005783 Golgi apparatusGO:0005794 nucleusGO:0005634
cGAS-STING nucleic-acid sensing signaling pathwaySignaling Pathwaycgas_sting_signaling
cGAS/STING signaling pathwayGO:0140896
Context
cytosolGO:0005829 endoplasmic reticulumGO:0005783 Golgi apparatusGO:0005794 nucleusGO:0005634

Connections

The cGAS/cGLR cyclic-dinucleotide product diffuses to and activates the STING adaptor.
Oligomerised, trafficked STING engages TBK1-family kinase signalling.
The STING-engaged kinase licenses the effector transcription factor, IRF3 in vertebrates and Relish in Drosophila.
Part 1: cytosolic nucleic-acid sensing and second messenger synthesis
cGAS/cGLR nucleic-acid sensing and cyclic-dinucleotide synthesisRegulatory Stepnucleic_acid_sensing

A cGAS or cGAS-like receptor binds its cytosolic nucleic-acid ligand and catalyses synthesis of a cyclic-dinucleotide second messenger from ATP and GTP. The ligand differs by lineage and is modelled as a variant set; the synthase activity is shared.

Annotons

cGAS/cGLR cyclic-dinucleotide synthase
cgas_cgamp_synthase
Participant: Family: cGAS / cGAS-like nucleotidyltransferase (cGLR) sensor
Family:
cGAS / cGAS-like nucleotidyltransferase (cGLR) sensor The cyclic-dinucleotide-synthesising second-messenger role is conserved across animals as the cGAS/cGLR clade within the Mab-21 nucleotidyltransferase family (PANTHER PTHR10656). Vertebrate cGAS (subfamily SF35) senses dsDNA and makes 2'3'-cGAMP, whereas invertebrate cGAS-like receptors (cGLRs; subfamily SF42) sense diverse ligands (e.g. dsRNA) and make other cyclic dinucleotides such as 3'2'-cGAMP; the family term is left unasserted because no single PANTHER family/subfamily id cleanly circumscribes the immune cGAS+cGLR sensors across animals (SF35 and SF42 are paralogous subfunctions).
Representative Members: CGAS (human, vertebrate cGAS; SF35)UniProtKB:Q8N884 cGlr1 (Drosophila cGAS-like receptor 1; SF42)UniProtKB:A1ZA55 cGlr2 (Drosophila cGAS-like receptor 2; SF42)UniProtKB:A8DYP7 cGAS/cGLR (Nematostella vectensis, cnidarian; SF42)UniProtKB:A7SFB5 cGLR (Hydra vulgaris, cnidarian; SF42)UniProtKB:A0A8B6XWW9

Function

2',3'-cyclic GMP-AMP synthase activityGO:0061501 Ligand-activated cGAS/cGLR synthesises a diffusible cyclic-dinucleotide second messenger; the vertebrate cGAS activity shown here (GO:0061501) makes 2'3'-cGAMP from GTP and ATP, while invertebrate cGLRs make related cyclic dinucleotides such as 3'2'-cGAMP.
Substrates: GTPCHEBI:15996 ATPCHEBI:15422
Products: 2',3'-cGAMPCHEBI:75947

Locations

cytosolGO:0005829

Exemplar for the second-messenger synthase role in the cGAS-STING pathway; its cyclic GMP-AMP product is the ligand that activates STING.

Variant set: Nucleic-acid ligand sensing variants by ligand / taxon (One Or More)

Vertebrate cGAS binds double-stranded DNA; Drosophila cGLR1 binds double-stranded RNA. Neither fly cGLR carries a DNA-binding annotation, so the vertebrate dsDNA function is not assigned a fly representative. The ligand of fly cGLR2 is not established and is not modelled here.

Vertebrate cGAS double-stranded DNA sensingRegulatory Stepvertebrate_dsdna_sensing

cGAS recognises cytosolic double-stranded DNA in a sequence-independent manner and forms liquid-like condensates, the licensing event for its catalytic activation.

Context
vertebratesNCBITaxon:7742

Annotons

cGAS double-stranded DNA sensor
cgas_dsdna_sensor
Participant: Gene Product: CGAS
Gene Product:

Function

double-stranded DNA bindingGO:0003690 cGAS recognises cytosolic double-stranded DNA in a sequence-independent manner, the licensing event for its catalytic activation.

Locations

cytosolGO:0005829

Exemplar for the vertebrate cytosolic dsDNA sensor role in the cGAS-STING pathway.

Drosophila cGLR1 double-stranded RNA sensingRegulatory Stepdrosophila_dsrna_sensing

Drosophila cGAS-like receptor 1 binds long double-stranded RNA, which activates its synthesis of 3',2'-cGAMP for dSTING.

Context
Drosophila melanogasterNCBITaxon:7227

Annotons

cGLR1 double-stranded RNA sensor
cglr1_dsrna_sensor
Participant: Gene Product: cGlr1
Gene Product:

Function

double-stranded RNA bindingGO:0003725 cGLR1 recognises long double-stranded RNA, the licensing event for its cyclic-dinucleotide synthase activity.

Processes

response to exogenous dsRNAGO:0043330

Locations

cytosolGO:0005829

Exemplar for the Drosophila cytosolic dsRNA sensor role in the cGAS-STING pathway.

Part 2: sting activation and er-to-golgi trafficking
STING activation and ER-to-Golgi traffickingRegulatory Stepsting_activation

STING in the ER membrane binds the cyclic-dinucleotide second messenger, oligomerises, exits the ER to the ERGIC and Golgi, and serves as the signalling adaptor that engages TBK1-family kinase signalling.

Annotons

STING cyclic GMP-AMP receptor
sting_cgamp_receptor
Participant: Family: STING cyclic-dinucleotide receptor family/ortholog group
Family:
STING cyclic-dinucleotide receptor family/ortholog groupPANTHER:PTHR34339 Human STING1 binds 2',3'-cGAMP with high affinity. Drosophila Sting carries a curated IDA annotation for 2',3'-cGAMP binding and mounts a Sting-dependent antiviral response to it in vivo (PMID:33262294), but its preferred endogenous ligand is 3',2'-cGAMP, the main product of fly cGLR1; in a thermal-shift assay it formed a stable complex only with 3',2'-cGAMP and showed diminished affinity for 2',3'-cGAMP (PMID:34261127). The shared 2',3'-cGAMP binding term is used because GO:0140704 3',2'-cyclic GMP-AMP binding is not currently placed under GO:0140702 cyclic GMP-AMP binding, so no single parent term covers both ligands.
Representative Members: STING1 (human)UniProtKB:Q86WV6 Sting (Drosophila melanogaster)UniProtKB:A0A0B4LFY9

Function

2',3'-cyclic GMP-AMP bindingGO:0061507 STING is the intracellular receptor for cGAS/cGLR-derived cyclic GMP-AMP; ligand binding closes the ligand-binding domain and drives higher-order oligomerisation. Ligand preference differs by lineage, with 2',3'-cGAMP in vertebrates and 3',2'-cGAMP in Drosophila.

Locations

endoplasmic reticulum membraneGO:0005789

Exemplar for the cyclic-dinucleotide receptor role in the cGAS-STING pathway.

STING signaling adaptor
sting_signaling_adaptor
Participant: Family: STING signaling adaptor family/ortholog group
Family:
STING signaling adaptor family/ortholog groupPANTHER:PTHR34339 STING is deeply conserved across animals, from cnidarians through insects and molluscs to vertebrates, marking the cGAS-STING sensor-adaptor axis as pre-bilaterian. The IRF3-type I interferon output is a vertebrate elaboration; in Drosophila activated STING signals to the NF-kappaB factor Relish. Both outputs are modelled as variants of the final step.
Representative Members: STING1 (human, vertebrate)UniProtKB:Q86WV6 sting1 (zebrafish, teleost)UniProtKB:E7F4N7 Sting (Drosophila melanogaster, insect)UniProtKB:A0A0B4LFY9 STING (Magallana gigas, Pacific oyster; mollusc)UniProtKB:P0DUE1 STING (Nematostella vectensis, sea anemone; cnidarian)UniProtKB:A7SLZ2 STING1 (Stylophora pistillata, coral; cnidarian)UniProtKB:A0A2B4SJD2

Function

signaling adaptor activityGO:0035591 Oligomerised STING traffics to the ERGIC/Golgi and acts as the signalling scaffold for TBK1-family kinase signalling; in vertebrates its phosphorylated C-terminal tail recruits TBK1 and serves as an IRF3 docking site.

Locations

Golgi apparatusGO:0005794

Exemplar for the central signalling-adaptor role in the cGAS-STING pathway.

Part 3: tbk1 recruitment and kinase activation
TBK1-family kinase recruitment and activationRegulatory Steptbk1_activation

A TBK1-family kinase is engaged by activated STING. In vertebrates TBK1 is recruited to oligomerised STING1, trans-autophosphorylates on Ser172, phosphorylates the STING1 C-terminal tail, and then phosphorylates IRF3. In Drosophila the TBK1 ortholog IKKepsilon (dTBK1) is required for STING-dependent, NF-kappaB-dependent antiviral gene expression, and IKKbeta also acts downstream of dSTING.

Annotons

TBK1/IKKepsilon kinase
tbk1_kinase
Participant: Family: TBK1/IKK-related kinase family/ortholog group
Family:
TBK1/IKK-related kinase family/ortholog groupPANTHER:PTHR22969
Representative Members: TBK1 (human)UniProtKB:Q9UHD2 IKKepsilon / ik2 / dTBK1 (Drosophila melanogaster)UniProtKB:Q9V3Y8

Function

protein serine/threonine kinase activityGO:0004674 STING-engaged TBK1-family kinase activity couples adaptor activation to the innate immune transcriptional output. The listed targets are the characterised human TBK1 substrates; the direct substrates of fly IKKepsilon in this pathway are not established.
Targets: STING1UniProtKB:Q86WV6 IRF3UniProtKB:Q14653

Processes

activation of innate immune responseGO:0002218

Locations

cytoplasmGO:0005737

Exemplar for the STING-engaged effector kinase role in the cGAS-STING pathway. Type I interferon production is asserted on the vertebrate IRF3 variant rather than here, because Drosophila has no interferons.

Part 4: innate immune transcriptional output
Innate immune transcriptional outputRegulatory Steptranscriptional_output

The STING-engaged kinase activates an effector transcription factor that induces antiviral gene expression. The effector differs by lineage and is modelled as a variant set.

Variant set: Effector transcription factor variants by transcription factor family / taxon (One Or More)

Vertebrates use IRF3 to induce type I interferon. Drosophila has no protein with the IRF DNA-binding domain (InterPro IPR001346) and uses the NF-kappaB factor Relish, which occupies the same position but is not homologous to IRF3. More than one variant can apply because vertebrate STING also activates NF-kappaB; that vertebrate NF-kappaB branch is not modelled here.

Vertebrate IRF3 activation and type I interferon inductionRegulatory Stepvertebrate_irf3_ifn_induction

TBK1-phosphorylated IRF3 dimerises, translocates to the nucleus, and drives transcription of type I interferon genes.

Context
vertebratesNCBITaxon:7742

Annotons

IRF3 transcription activator
irf3_transcription_factor
Participant: Gene Product: IRF3
Gene Product:

Function

DNA-binding transcription activator activityGO:0001216 Phosphorylated, dimerised IRF3 binds interferon-stimulated response elements and activates transcription of type I interferon genes.

Processes

positive regulation of type I interferon productionGO:0032481

Locations

nucleusGO:0005634

Exemplar for the vertebrate terminal transcription-factor role that produces the type I interferon output of the cGAS-STING pathway.

Drosophila Relish NF-kappaB antiviral outputRegulatory Stepdrosophila_relish_nfkb_output

Downstream of dSTING, the NF-kappaB factor Relish enters the nucleus and induces antiviral gene expression.

Context
Drosophila melanogasterNCBITaxon:7227

Annotons

Relish transcription factor
relish_transcription_factor
Participant: Gene Product: Rel
Gene Product:

Function

DNA-binding transcription factor activity, RNA polymerase II-specificGO:0000981 Relish binds kappaB sites and drives transcription of antiviral genes in response to dSTING signalling.

Processes

defense response to virusGO:0051607

Locations

nucleusGO:0005634

Exemplar for the Drosophila terminal transcription-factor role that produces the NF-kappaB antiviral output of the cGAS-STING pathway.