Function
Locations
Builds the all-trans-decaprenyl (C50) tail of CoQ10.
Coenzyme Q10 (ubiquinone-10) is the lipophilic electron/proton carrier of the mitochondrial inner membrane that shuttles electrons from respiratory Complexes I and II (and from electron-transfer flavoprotein, dihydroorotate dehydrogenase and others) to Complex III, and is a membrane antioxidant. Its biosynthesis has two arms that meet at the matrix face of the inner membrane. First, the C50 polyisoprenoid tail is built: the all-trans-decaprenyl-diphosphate synthase, a heterotetramer of PDSS1 and PDSS2, condenses (2E,6E)-farnesyl diphosphate with isopentenyl diphosphate units to all-trans- decaprenyl diphosphate. The polytopic inner-membrane prenyltransferase COQ2 then attaches this tail to the ring precursor 4-hydroxybenzoate, committing it to the pathway. A series of ring modifications, carried out by a membrane-associated multienzyme assembly (the "COQ synthome"/complex Q), converts the polyprenyl-hydroxybenzoate to ubiquinol: FAD-dependent hydroxylation by COQ6, C-methylation by the SAM-dependent methyltransferase COQ5, Zn-dependent C1 decarboxylation by COQ4, di-iron C6 hydroxylation by COQ7 (whose lipophilic substrate is bound and presented by the lipid-binding protein COQ9), and the two O-methylation steps performed by COQ3 (not covered here). Assembly and activity of the synthome require the atypical UbiB-family kinase/ATPases COQ8A and COQ8B. The exact order of the head-group modifications in humans is not fully resolved, and the enzymes act within the synthome complex rather than as free-standing steps. Defects in any of these genes cause primary coenzyme Q10 deficiency, a clinically heterogeneous mitochondrial disease (encephalomyopathy, cerebellar ataxia, steroid-resistant nephrotic syndrome, Leigh syndrome), some forms of which are partially responsive to oral CoQ10.
All recommended fields populated.
✗ none found
No MODULE:coenzyme_q10_biosynthesis deep-research report alongside the module YAML.
✓ every leaf node grounds to a representative protein.
✓ every declared conforms_to bundle matches its template motif.
10 complete review(s) · 0 with deep research · 0 missing review · 10 reviewed but lacking deep research
| Gene | Review | Complete | Deep research |
|---|---|---|---|
| COQ2 Q96H96 | ✓ | ✓ | ✗ |
| COQ4 Q9Y3A0 | ✓ | ✓ | ✗ |
| COQ5 Q5HYK3 | ✓ | ✓ | ✗ |
| COQ6 Q9Y2Z9 | ✓ | ✓ | ✗ |
| COQ7 Q99807 | ✓ | ✓ | ✗ |
| COQ8A Q8NI60 | ✓ | ✓ | ✗ |
| COQ8B Q96D53 | ✓ | ✓ | ✗ |
| COQ9 O75208 | ✓ | ✓ | ✗ |
| PDSS1 Q5T2R2 | ✓ | ✓ | ✗ |
| PDSS2 Q86YH6 | ✓ | ✓ | ✗ |
Coenzyme Q10 (ubiquinone) biosynthesis (GO:0006744), grounded to ten completed human gene reviews. Tail: PDSS1 (Q5T2R2) + PDSS2 (Q86YH6) share PTHR12001 and form the heterotetrameric decaprenyl- diphosphate synthase (GO:0097269; complex GO:0032478). Ring commitment: COQ2 (Q96H96 PTHR11048, GO:0008412 4-HB polyprenyltransferase, inner membrane). Head-group modification (the membrane- associated "COQ synthome"/complex Q, GO:0110142): COQ6 (Q9Y2Z9 PTHR43876, GO:0106364 FAD monooxygenase), COQ5 (Q5HYK3 PTHR43591, GO:0008425 SAM C-methyltransferase), COQ4 (Q9Y3A0 PTHR12922, GO:0120539 Zn C1 decarboxylase + synthome scaffold — the catalytic role is from 2024 biochemistry, superseding the older "non-catalytic scaffold" view), COQ7 (Q99807 PTHR11237, GO:0160224 di-iron C6 hydroxylase — di-iron, NOT flavin), with COQ9 (O75208 PTHR21427) a non-catalytic lipid-binding protein that presents the DMQ substrate to COQ7. The two O-methylation steps (COQ3) are not covered (COQ3 is not in the dismech gene set). Assembly/activity of the synthome requires the atypical UbiB-family enzymes COQ8A (Q8NI60) and COQ8B (Q96D53), which share PTHR43851: COQ8A's demonstrated activity is an ATPase (it explicitly LACKS canonical in-trans protein-kinase activity — a NOT annotation), whereas COQ8B has a demonstrated COQ3-directed protein-kinase activity; both are ATP-binding and regulatory rather than pathway-metabolite enzymes, so they are modelled with `processes` (GO:0006744) not a catalytic `function`. CoQ10 is the electron carrier feeding the OXPHOS Complex III curated in the respiratory-chain modules. GO term ids/labels verified against the local go.db. Disorders: primary CoQ10 deficiency COQ10D1-D9 (COQ2 D1, PDSS1 D2, PDSS2 D3, COQ8A D4, COQ9 D5, COQ6 D6, COQ4 D7, COQ7 D8, COQ8B D9), variably CoQ10-responsive.
Builds the all-trans-decaprenyl (C50) tail of CoQ10.
Attaches the decaprenyl tail to 4-hydroxybenzoate.
FAD-dependent hydroxylation of the CoQ ring intermediate.
SAM-dependent C-methylation of the CoQ ring.
Zn-dependent C1 decarboxylation; scaffolds the COQ synthome.
Di-iron C6 hydroxylation of demethoxyubiquinol (penultimate step).
Non-catalytic lipid-binding protein; binds and presents the lipophilic DMQ substrate to COQ7 (COQ7:COQ9 module), activating the penultimate hydroxylation. Deficiency = COQ10D5.
ATP-binding UbiB-family enzymes required for assembly/activity of the COQ synthome. COQ8A's demonstrated activity is an ATPase (not canonical protein kinase); COQ8B has a COQ3-directed protein-kinase activity. COQ8A -> COQ10D4/ARCA2 ataxia; COQ8B -> COQ10D9 steroid-resistant nephrotic syndrome.