L-arginine metabolism in Drosophila melanogaster

Three conserved urea-cycle enzymes interconvert citrulline, arginine and ornithine in Drosophila. Argininosuccinate synthase (Ass) condenses citrulline with aspartate to form argininosuccinate, argininosuccinate lyase (Argl) cleaves it to arginine and fumarate, and arginase (Arg) hydrolyses arginine to ornithine and urea. Together the first two steps regenerate arginine from citrulline, and arginase links arginine to ornithine, the precursor of proline and polyamines. Insects are not known to run a complete urea cycle, so the three enzymes act as a branch of amino acid metabolism rather than as the main route of nitrogen excretion.

MODULE:dmel_arginine_metabolismDRAFTCONCRETEMetabolic Pathwaymodules/dmel_arginine_metabolism.yaml
arginine metabolic processGO:0006525
FB:FBgg0002186
FlyBase gene group ARGMET: L-arginine metabolism
FlyBase release FB2026_03 groups 3 D. melanogaster genes as l-arginine metabolism (ARGMET); this module models that group.
GO:0006525
arginine metabolic process
GO term grounding the module as arginine metabolic process.

Boundary. The module covers the three FlyBase L-arginine metabolism enzymes. Arginine use by nitric oxide synthase (which yields citrulline) and by arginine kinase, and ornithine use for proline and polyamine synthesis, are connected pathways and not parts. The enzyme functions are assigned by orthology to the well-characterized urea-cycle enzymes. FlyBase groups realized by this module: ARGMET (FBgg0002186). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_arginine_metabolism.yaml. Member genes with a gene review in this repository: Arg, Argl, Ass.

4Nodes
3Parts
0Variant Sets
0Variants
3Annotons
2Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_arginine_metabolism deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Reaction chaining (advisory)

✓ every PRECEDES step chains, or its break is acknowledged via chaining_status.

  • argininosuccinate_synthesis → argininosuccinate_cleavage [NOT_CHECKED]
  • argininosuccinate_cleavage → arginine_hydrolysis [NOT_CHECKED]

Function consistency and core coverage

3 gene-function check(s) reflected in core functions · 0 conflict(s) · 0 evidence or coverage gap(s) (3 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
argininosuccinate_synthesis_ass Ass
UniProtKB:O97069
Gene
argininosuccinate synthase activity
GO:0004055
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
argininosuccinate_cleavage_argl Argl
UniProtKB:Q9VLG9
Gene
argininosuccinate lyase activity
GO:0004056
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
arginine_hydrolysis_arg Arg
UniProtKB:O76895
Gene
arginase activity
GO:0004053
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).

Gene-review completeness (3/3 grounded genes reviewed)

2 complete review(s) · 3 with deep research · 0 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Arg O76895 ✓ 11/13 ✓
Argl Q9VLG9 ✓ ✓ ✓
Ass O97069 ✓ ✓ ✓

Details

Context
Drosophila melanogasterNCBITaxon:7227
L-arginine metabolismMetabolic Pathwaydmel_arginine_metabolism

Ass and Argl regenerate arginine from citrulline, and arginase converts arginine to ornithine and urea.

arginine metabolic processGO:0006525
Context
Drosophila melanogasterNCBITaxon:7227

Connections

Argininosuccinate made by Ass is the substrate of Argl.
Arginine released by Argl can be hydrolysed by arginase.
Part 1: citrulline + aspartate to argininosuccinate
Argininosuccinate synthesisMetabolic Pathwayargininosuccinate_synthesis

Annotons

Ass Argininosuccinate synthesis
argininosuccinate_synthesis_ass
Participant: Gene Product: Ass
Gene Product:

Function

argininosuccinate synthase activityGO:0004055
Part 2: argininosuccinate to arginine + fumarate
Argininosuccinate cleavageMetabolic Pathwayargininosuccinate_cleavage

Annotons

Argl Argininosuccinate cleavage
argininosuccinate_cleavage_argl
Participant: Gene Product: Argl
Gene Product:

Function

argininosuccinate lyase activityGO:0004056
Part 3: arginine to ornithine + urea
Arginine hydrolysisMetabolic Pathwayarginine_hydrolysis

Annotons

Arg Arginine hydrolysis
arginine_hydrolysis_arg
Participant: Gene Product: Arg
Gene Product:

Function

arginase activityGO:0004053