COP9 signalosome in Drosophila melanogaster

The COP9 signalosome (CSN) is an eight-subunit complex that removes the ubiquitin-like protein Nedd8 from cullins, thereby controlling the activity and assembly of cullin-RING ubiquitin ligases. Six subunits (CSN1, CSN2, CSN3, CSN4, CSN7 and CSN8) contain PCI domains and form a horseshoe-shaped scaffold, and two subunits (CSN5 and CSN6) contain MPN domains; CSN5 is the JAMM metalloprotease that carries the deneddylase activity. Drosophila has two CSN1 paralogs: CSN1b in the ubiquitous complex and CSN1a in a testis-specific variant. The Drosophila CSN2 subunit is encoded by alien.

MODULE:dmel_cop9_signalosomeDRAFTCONCRETEProtein Complexmodules/dmel_cop9_signalosome.yaml
COP9 signalosomeGO:0008180
FB:FBgg0001828
FlyBase gene group COP9-C: Cop9 signalosome complexes
FlyBase release FB2026_03 groups 9 D. melanogaster genes as cop9 signalosome complexes (COP9-C); this module models that group.
GO:0008180
COP9 signalosome
GO term grounding the module as COP9 signalosome.

FlyBase subgroups COP9 and COP9-T share seven subunits and differ only in CSN1b versus CSN1a; the shared subunits are modelled once. CSN1 is a PCI subunit but is modelled as its own part to hold the paralog variants. FlyBase groups realized by this module: COP9-C (FBgg0001828). Subgroups folded into it: COP9, COP9-T. Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_cop9_signalosome.yaml. Member genes with a gene review in this repository: CSN5.

6Nodes
3Parts
1Variant Sets
2Variants
4Annotons
0Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_cop9_signalosome deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

1 gene-function check(s) reflected in core functions · 0 conflict(s) · 0 evidence or coverage gap(s) (1 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
mpn_catalytic_complex/csn5 CSN5
UniProtKB:Q9XZ58
Complex Unit
deNEDDylase activity
GO:0019784
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).

Gene-review completeness (1/9 grounded genes reviewed)

1 complete review(s) · 1 with deep research · 8 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
CSN5 Q9XZ58 ✓ ✓ ✓
CSN8 Q7KTH8 ✗ — —
CSN3 Q8SYG2 ✗ — —
alien Q94899 ✗ — —
CSN4 Q9V345 ✗ — —
CSN7 Q9V4S8 ✗ — —
CSN6 Q9VCY3 ✗ — —
CSN1a Q9VJR9 ✗ — —
CSN1b Q9VVU5 ✗ — —

Details

Context
Drosophila melanogasterNCBITaxon:7227
COP9 signalosomeProtein Complexdmel_cop9_signalosome

Eight-subunit cullin deneddylase complex with a CSN5 JAMM catalytic subunit and ubiquitous (CSN1b) or testis-specific (CSN1a) variants.

COP9 signalosomeGO:0008180
Context
Drosophila melanogasterNCBITaxon:7227
Part 1: PCI scaffold
PCI-domain scaffold subunitsProtein Complexpci_scaffold

Annotons

PCI-domain scaffold subunits
pci_scaffold_complex
Participant: Protein Complex: PCI-domain scaffold subunits
Protein Complex:
PCI-domain scaffold subunits
Active units:
alien
Participant: Gene Product: alien
Gene Product:
CSN3
Participant: Gene Product: CSN3
Gene Product:
CSN4
Participant: Gene Product: CSN4
Gene Product:
CSN7
Participant: Gene Product: CSN7
Gene Product:
CSN8
Participant: Gene Product: CSN8
Gene Product:
Part 2: PCI subunit, variant-specific
CSN1 subunitProtein Complexcsn1
Variant set: CSN1b (ubiquitous) or CSN1a (testis-specific) (Exactly One)
CSN1b ubiquitous complexProtein Complexcsn1b_variant

Annotons

CSN1b CSN1b ubiquitous complex
csn1b_variant_csn1b
Participant: Gene Product: CSN1b
Gene Product:
CSN1a testis-specific complexProtein Complexcsn1a_testis_variant

Annotons

CSN1a CSN1a testis-specific complex
csn1a_testis_variant_csn1a
Participant: Gene Product: CSN1a
Gene Product:
Part 3: catalytic deneddylase module
CSN5-CSN6 MPN dimerProtein Complexmpn_catalytic

Annotons

CSN5-CSN6 MPN dimer
mpn_catalytic_complex
Participant: Protein Complex: CSN5-CSN6 MPN dimer
Protein Complex:
CSN5-CSN6 MPN dimer
Active units:
CSN5
Participant: Gene Product: CSN5
Gene Product:
Function:
deNEDDylase activityGO:0019784
CSN6
Participant: Gene Product: CSN6
Gene Product:

Processes

protein deneddylationGO:0000338