COPI coatomer in Drosophila melanogaster

Coatomer is the heptameric coat of COPI vesicles, which mediate retrograde transport from the Golgi apparatus to the endoplasmic reticulum and transport between Golgi cisternae. Coatomer is recruited en bloc to membranes by the small GTPase Arf1 in its GTP-bound form and binds cargo with dilysine and related sorting signals. Structurally it consists of a B-subcomplex (alpha, beta' and epsilon subunits) that forms the outer cage-like layer and an F-subcomplex (beta, gamma, delta and zeta subunits) that resembles the clathrin adaptor complexes and contacts the membrane.

MODULE:dmel_copi_coatDRAFTCONCRETEProtein Complexmodules/dmel_copi_coat.yaml
COPI vesicle coatGO:0030126
FB:FBgg0000087
FlyBase gene group COPI: Coat protein complex i
FlyBase release FB2026_03 groups 7 D. melanogaster genes as coat protein complex i (COPI); this module models that group.
GO:0030126
COPI vesicle coat
GO term grounding the module as COPI vesicle coat.

Boundary. The module contains the seven coatomer subunits. The Arf1 GTPase (Arf79F in Drosophila), its GEFs and GAPs regulate coat recruitment and are context, not parts. No molecular function is assigned: coatomer is treated as a structural vesicle coat, and its subunits carry only structural molecule activity (IEA) in GOA. FlyBase groups realized by this module: COPI (FBgg0000087). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_copi_coat.yaml. None of the member genes has a gene review in this repository yet.

3Nodes
2Parts
0Variant Sets
0Variants
2Annotons
0Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_copi_coat deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

No functional claims were checked. This does not establish consistency with gene or family reviews.

Gene-review completeness (0/7 grounded genes reviewed)

0 complete review(s) · 0 with deep research · 7 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
beta'COP O62621 ✗ — —
betaCOP P45437 ✗ — —
gammaCOP Q8I0G5 ✗ — —
zetaCOP Q9VV89 ✗ — —
alphaCOP Q9W0B8 ✗ — —
deltaCOP Q9W555 ✗ — —
epsilonCOP Q9Y0Y5 ✗ — —

Details

Context
Drosophila melanogasterNCBITaxon:7227
Golgi membraneGO:0000139
COPI coatProtein Complexdmel_copi_coat

Heptameric coatomer that coats COPI vesicles for Golgi-to-ER retrograde and intra-Golgi transport.

COPI vesicle coatGO:0030126
Context
Drosophila melanogasterNCBITaxon:7227
Golgi membraneGO:0000139
Part 1: outer coat layer
COPI B-subcomplexProtein Complexcopi_b_subcomplex

Alpha, beta' and epsilon coatomer subunits, which form the outer, cage-like layer of the coat.

Annotons

COPI B-subcomplex
copi_b_subcomplex_complex
Participant: Protein Complex: COPI B-subcomplex
Protein Complex:
COPI B-subcomplex
Active units:
alphaCOP
Participant: Gene Product: alphaCOP
Gene Product:
beta'COP
Participant: Gene Product: beta'COP
Gene Product:
epsilonCOP
Participant: Gene Product: epsilonCOP
Gene Product:
epsilonCOPUniProtKB:Q9Y0Y5

Processes

retrograde vesicle-mediated transport, Golgi to endoplasmic reticulumGO:0006890
Part 2: adaptor-like inner coat layer
COPI F-subcomplexProtein Complexcopi_f_subcomplex

Beta, gamma, delta and zeta coatomer subunits, the adaptor-like layer that contacts the membrane and cargo.

Annotons

COPI F-subcomplex
copi_f_subcomplex_complex
Participant: Protein Complex: COPI F-subcomplex
Protein Complex:
COPI F-subcomplex
Active units:
betaCOP
Participant: Gene Product: betaCOP
Gene Product:
gammaCOP
Participant: Gene Product: gammaCOP
Gene Product:
deltaCOP
Participant: Gene Product: deltaCOP
Gene Product:
zetaCOP
Participant: Gene Product: zetaCOP
Gene Product:

Processes

retrograde vesicle-mediated transport, Golgi to endoplasmic reticulumGO:0006890