Elongator complex in Drosophila melanogaster

Elongator is a conserved six-subunit complex that modifies uridines at the wobble position (U34) of tRNAs by adding a carboxymethyl group, the first step towards mcm5U and mcm5s2U, which are needed for efficient and accurate decoding. It is formed by two subcomplexes. Elp1, Elp2 and Elp3 form the core subcomplex; Elp3 is the catalytic subunit, a radical SAM enzyme with an acetyltransferase domain, and Elp1 is the scaffold. Elp4, Elp5 and Elp6 form a hetero-hexameric RecA-like ring (two copies of each) that binds tRNA and ATP. In Drosophila, Elp3 is required for larval development and neuronal function.

MODULE:dmel_elongator_complexDRAFTCONCRETEProtein Complexmodules/dmel_elongator_complex.yaml
elongator holoenzyme complexGO:0033588
FB:FBgg0001820
FlyBase gene group ELP: Elongator holoenzyme complex
FlyBase release FB2026_03 groups 6 D. melanogaster genes as elongator holoenzyme complex (ELP); this module models that group.
GO:0033588
elongator holoenzyme complex
GO term grounding the module as elongator holoenzyme complex.

The split into Elp1-3 and Elp4-6 subcomplexes follows the conserved architecture defined in yeast and human; FlyBase groups all six subunits in ELP. Elongator was first described as an RNA polymerase II elongation factor, but its established direct activity is tRNA modification, so transcription elongation is not a process here. FlyBase groups realized by this module: ELP (FBgg0001820). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_elongator_complex.yaml. None of the member genes has a gene review in this repository yet.

3Nodes
2Parts
0Variant Sets
0Variants
2Annotons
0Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_elongator_complex deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

0 gene-function check(s) reflected in core functions · 0 conflict(s) · 1 evidence or coverage gap(s) (1 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
elp123_complex/elp3 Elp3
UniProtKB:Q9VQZ6
Complex Unit
tRNA uridine(34) acetyltransferase activity
GO:0106261
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.

Gene-review completeness (0/6 grounded genes reviewed)

0 complete review(s) · 0 with deep research · 6 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Elp5 Q24050 ✗ — —
Elp2 Q7K4B3 ✗ — —
Elp6 Q9VFW4 ✗ — —
Elp1 Q9VGK7 ✗ — —
Elp4 Q9VMQ7 ✗ — —
Elp3 Q9VQZ6 ✗ — —

Details

Context
Drosophila melanogasterNCBITaxon:7227
Elongator complexProtein Complexdmel_elongator_complex

Elp1-3 catalytic subcomplex and Elp4-6 ring that carboxymethylate tRNA wobble uridines.

elongator holoenzyme complexGO:0033588
Context
Drosophila melanogasterNCBITaxon:7227
Part 1: catalytic core and scaffold
Elp1-Elp2-Elp3 core subcomplexProtein Complexelp123

Annotons

Elp1-Elp2-Elp3 core subcomplex
elp123_complex
Participant: Protein Complex: Elp1-Elp2-Elp3 core subcomplex
Protein Complex:
Elp1-Elp2-Elp3 core subcomplex
Active units:
Elp1
Participant: Gene Product: Elp1
Gene Product:
Role: scaffold subunit
Elp2
Participant: Gene Product: Elp2
Gene Product:
Role: WD40 subunit
Elp3
Participant: Gene Product: Elp3
Gene Product:
Role: catalytic subunit
Function:
tRNA uridine(34) acetyltransferase activityGO:0106261

Processes

tRNA wobble uridine modificationGO:0002098
Part 2: tRNA-binding hexameric ring
Elp4-Elp5-Elp6 ring subcomplexProtein Complexelp456

Annotons

Elp4-Elp5-Elp6 ring subcomplex
elp456_complex
Participant: Protein Complex: Elp4-Elp5-Elp6 ring subcomplex
Protein Complex:
Elp4-Elp5-Elp6 ring subcomplex
Active units:
Elp4
Participant: Gene Product: Elp4
Gene Product:
Elp5
Participant: Gene Product: Elp5
Gene Product:
Elp6
Participant: Gene Product: Elp6
Gene Product:

Processes

tRNA wobble uridine modificationGO:0002098