ESCRT machinery in Drosophila melanogaster

The endosomal sorting complexes required for transport (ESCRTs) sort ubiquitylated membrane proteins into intralumenal vesicles of multivesicular bodies and drive membrane scission that buds away from the cytoplasm. ESCRT-0 (Hrs, Stam) binds ubiquitylated cargo on endosomes; ESCRT-I and ESCRT-II bind cargo and membrane and nucleate ESCRT-III, whose subunits polymerize into spirals that constrict the bud neck. The AAA ATPase Vps4, with its cofactor Vta1, disassembles ESCRT-III and recycles it. The same ESCRT-III and Vps4 machinery acts in cytokinetic abscission, nuclear envelope sealing and membrane repair. In Drosophila, loss of ESCRT function causes accumulation of signalling receptors such as Notch on endosomes and neoplastic overgrowth in epithelia.

MODULE:dmel_escrt_machineryDRAFTCONCRETEProtein Complexmodules/dmel_escrt_machinery.yaml
endosome transport via multivesicular body sorting pathwayGO:0032509
FB:FBgg0000215
FlyBase gene group ESCRT: Endosomal sorting complexes required for transport
FlyBase release FB2026_03 groups 20 D. melanogaster genes as endosomal sorting complexes required for transport (ESCRT); this module models that group.
GO:0032509
endosome transport via multivesicular body sorting pathway
GO term grounding the module as endosome transport via multivesicular body sorting pathway.

Decomposition. The five ESCRT subcomplexes are modelled as ordered parts, following the sequential recruitment established for the MVB pathway. The two ESCRT-I variants that differ in their Vps37 paralog are alternatives. Accessory factors such as ALiX are outside the module. FlyBase groups realized by this module: ESCRT (FBgg0000215). Subgroups folded into it: VSP4C, ESCRT-0, ESCRT-III, ESCRT-I, ESCRT-II, ESCRT-IB, ESCRT-IA. Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_escrt_machinery.yaml. None of the member genes has a gene review in this repository yet.

8Nodes
5Parts
1Variant Sets
2Variants
6Annotons
4Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_escrt_machinery deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Reaction chaining (advisory)

✓ every PRECEDES step chains, or its break is acknowledged via chaining_status.

  • escrt_0 → escrt_i [NOT_CHECKED]
  • escrt_i → escrt_ii [NOT_CHECKED]
  • escrt_ii → escrt_iii [NOT_CHECKED]
  • escrt_iii → vps4_vta1 [NOT_CHECKED]

Function consistency and core coverage

0 gene-function check(s) reflected in core functions · 0 conflict(s) · 1 evidence or coverage gap(s) (1 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
vps4_vta1_complex/vps4 Vps4
UniProtKB:Q9Y162
Complex Unit
ATP hydrolysis activity
GO:0016887
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.

Gene-review completeness (0/20 grounded genes reviewed)

0 complete review(s) · 0 with deep research · 20 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Vsp37A O77259 ✗ — —
Vps25 Q7JXV9 ✗ — —
CG5498 Q7KTZ0 ✗ — —
Chmp1 Q7KUS3 ✗ — —
shrb Q8T0Q4 ✗ — —
Hrs Q960X8 ✗ — —
Vps28 Q9V359 ✗ — —
Vps2 Q9VBI3 ✗ — —
lsn Q9VD72 ✗ — —
Vps24 Q9VN02 ✗ — —
Vps37B Q9VN88 ✗ — —
CHMP2B Q9VRJ5 ✗ — —
Vps36 Q9VU87 ✗ — —
TSG101 Q9VVA7 ✗ — —
Vps60 Q9VVI9 ✗ — —
Mvb12 Q9VWY7 ✗ — —
Vta1 Q9W0B3 ✗ — —
Vps20 Q9W236 ✗ — —
Stam Q9XTL2 ✗ — —
Vps4 Q9Y162 ✗ — —

Details

Context
Drosophila melanogasterNCBITaxon:7227
endosome membraneGO:0010008
ESCRT machineryProtein Complexdmel_escrt_machinery

ESCRT-0, -I, -II and -III with Vps4-Vta1 that sort ubiquitylated cargo into multivesicular bodies and drive outward membrane scission.

endosome transport via multivesicular body sorting pathwayGO:0032509
Context
Drosophila melanogasterNCBITaxon:7227
endosome membraneGO:0010008

Connections

escrt_0 -> escrt_i Precedes
ESCRT-0 recruits ESCRT-I to cargo-containing endosomal membrane.
escrt_i -> escrt_ii Precedes
ESCRT-I engages ESCRT-II.
escrt_ii -> escrt_iii Precedes
ESCRT-II nucleates ESCRT-III polymerization.
escrt_iii -> vps4_vta1 Precedes
Vps4-Vta1 is recruited by ESCRT-III and disassembles it.
Part 1: ubiquitylated cargo clustering
ESCRT-0Protein Complexescrt_0

Annotons

ESCRT-0
escrt_0_complex
Participant: Protein Complex: ESCRT-0
Protein Complex:
ESCRT-0GO:0033565
Active units:
Hrs
Participant: Gene Product: Hrs
Gene Product:
Stam
Participant: Gene Product: Stam
Gene Product:
Part 2: cargo binding and ESCRT-II recruitment
ESCRT-IProtein Complexescrt_i
Variant set: ESCRT-I Vps37A or Vps37B variant (One Or More)
ESCRT-I Vps37A variantProtein Complexescrt_ia

Annotons

ESCRT-I Vps37A variant
escrt_ia_complex
Participant: Protein Complex: ESCRT-I Vps37A variant
Protein Complex:
ESCRT-I Vps37A variantGO:0000813
Active units:
Mvb12
Participant: Gene Product: Mvb12
Gene Product:
TSG101
Participant: Gene Product: TSG101
Gene Product:
Vps28
Participant: Gene Product: Vps28
Gene Product:
Vsp37A
Participant: Gene Product: Vsp37A
Gene Product:
ESCRT-I Vps37B variantProtein Complexescrt_ib

Annotons

ESCRT-I Vps37B variant
escrt_ib_complex
Participant: Protein Complex: ESCRT-I Vps37B variant
Protein Complex:
ESCRT-I Vps37B variantGO:0000813
Active units:
Mvb12
Participant: Gene Product: Mvb12
Gene Product:
TSG101
Participant: Gene Product: TSG101
Gene Product:
Vps28
Participant: Gene Product: Vps28
Gene Product:
Vps37B
Participant: Gene Product: Vps37B
Gene Product:
Part 3: ESCRT-III nucleation
ESCRT-IIProtein Complexescrt_ii

Annotons

ESCRT-II
escrt_ii_complex
Participant: Protein Complex: ESCRT-II
Protein Complex:
ESCRT-IIGO:0000814
Active units:
Vps25
Participant: Gene Product: Vps25
Gene Product:
Vps36
Participant: Gene Product: Vps36
Gene Product:
lsn
Participant: Gene Product: lsn
Gene Product:
Part 4: membrane-constricting polymer
ESCRT-IIIProtein Complexescrt_iii

Annotons

ESCRT-III
escrt_iii_complex
Participant: Protein Complex: ESCRT-III
Protein Complex:
ESCRT-IIIGO:0000815
Active units:
CG5498
Participant: Gene Product: CG5498
Gene Product:
CHMP2B
Participant: Gene Product: CHMP2B
Gene Product:
Chmp1
Participant: Gene Product: Chmp1
Gene Product:
Vps2
Participant: Gene Product: Vps2
Gene Product:
Vps20
Participant: Gene Product: Vps20
Gene Product:
Vps24
Participant: Gene Product: Vps24
Gene Product:
Vps60
Participant: Gene Product: Vps60
Gene Product:
shrb
Participant: Gene Product: shrb
Gene Product:

Processes

membrane fissionGO:0090148
Part 5: ESCRT-III disassembly ATPase
Vps4-Vta1Protein Complexvps4_vta1

Annotons

Vps4-Vta1
vps4_vta1_complex
Participant: Protein Complex: Vps4-Vta1
Protein Complex:
Vps4-Vta1
Active units:
Vps4
Participant: Gene Product: Vps4
Gene Product:
Function:
ATP hydrolysis activityGO:0016887
Vta1
Participant: Gene Product: Vta1
Gene Product: