Mitochondrial type II fatty acid synthesis in Drosophila melanogaster

Mitochondria carry their own type II fatty acid synthesis (mtFAS) system, in which separate enzymes act on acyl chains attached to the mitochondrial acyl carrier protein (ND-ACP). Malonyl groups are loaded onto ACP by the malonyl transacylase (beg), condensed by a beta-ketoacyl-ACP synthase (CG12170), reduced by a 3-ketoacyl-ACP reductase, dehydrated and then reduced by the enoyl-ACP reductase Mecr. The main product, octanoyl-ACP, is the precursor of lipoic acid; acylated ACP also binds and supports assembly of respiratory complex I and the iron-sulfur cluster assembly machinery.

MODULE:dmel_mitochondrial_fatty_acid_synthesisDRAFTCONCRETEMetabolic Pathwaymodules/dmel_mitochondrial_fatty_acid_synthesis.yaml
fatty acid biosynthetic processGO:0006633
FB:FBgg0002247
FlyBase gene group MTFABIO: Fatty acid biosynthesis (mitochondria)
FlyBase release FB2026_03 groups 6 D. melanogaster genes as fatty acid biosynthesis (mitochondria) (MTFABIO); this module models that group.
GO:0006633
fatty acid biosynthetic process
GO term grounding the module as fatty acid biosynthetic process.

Boundary and caveats. The 3-hydroxyacyl-ACP dehydratase step (step 4; HTD2 in mammals) is not in the FlyBase group and is not modelled, so the connection from ketoacyl reduction to enoyl reduction spans it. Acc is a FlyBase member but is best known as the cytosolic acetyl-CoA carboxylase; whether a fly Acc isoform supplies malonyl-CoA inside mitochondria is not established (mammals use ACSF3 for intramitochondrial malonyl-CoA), so it is modelled as the malonyl-CoA supply step without a location claim. CG3603 is assigned to the ketoreductase step by its membership in the FlyBase group; in mammals this step is performed by an HSD17B8-CBR4 heterotetramer and the fly assignment is only by sequence similarity, so no molecular function is given. ND-ACP is also a subunit of respiratory complex I and part of the iron-sulfur cluster assembly complex (module dmel_iron_sulfur_cluster_assembly). Other molecular functions follow orthology and have not been assayed in flies. FlyBase groups realized by this module: MTFABIO (FBgg0002247). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_mitochondrial_fatty_acid_synthesis.yaml. None of the member genes has a gene review in this repository yet.

7Nodes
6Parts
0Variant Sets
0Variants
6Annotons
5Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_mitochondrial_fatty_acid_synthesis deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Reaction chaining (advisory)

✓ every PRECEDES step chains, or its break is acknowledged via chaining_status.

  • malonyl_transacylation → ketoacyl_condensation [NOT_CHECKED]
  • ketoacyl_condensation → ketoacyl_reduction [NOT_CHECKED]
  • ketoacyl_reduction → enoyl_reduction [NOT_CHECKED]

Function consistency and core coverage

0 gene-function check(s) reflected in core functions · 0 conflict(s) · 5 evidence or coverage gap(s) (5 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
malonyl_coa_supply_acc Acc
UniProtKB:A1Z784
Gene
acetyl-CoA carboxylase activity
GO:0003989
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
acyl_carrier_nd_acp ND-ACP
UniProtKB:Q94519
Gene
acyl carrier activity
GO:0000036
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
malonyl_transacylation_beg beg
UniProtKB:Q8T3L6
Gene
[acyl-carrier-protein] S-malonyltransferase activity
GO:0004314
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
ketoacyl_condensation_cg12170 CG12170
UniProtKB:Q9VNF5
Gene
3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004315
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.
enoyl_reduction_mecr Mecr
UniProtKB:Q9V6U9
Gene
enoyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0141148
Review Missing
No ai-review exists for this protein; its function and core-function coverage cannot yet be checked.

Gene-review completeness (0/6 grounded genes reviewed)

0 complete review(s) · 0 with deep research · 6 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Acc A1Z784 ✗ — —
beg Q8T3L6 ✗ — —
ND-ACP Q94519 ✗ — —
Mecr Q9V6U9 ✗ — —
CG12170 Q9VNF5 ✗ — —
CG3603 Q9W4U2 ✗ — —

Details

Context
Drosophila melanogasterNCBITaxon:7227
mitochondrial matrixGO:0005759
Mitochondrial fatty acid synthesisMetabolic Pathwaydmel_mitochondrial_fatty_acid_synthesis

Acyl carrier protein-based fatty acid synthesis in mitochondria that supplies octanoyl chains for lipoic acid synthesis.

fatty acid biosynthetic processGO:0006633
Context
Drosophila melanogasterNCBITaxon:7227
mitochondrial matrixGO:0005759

Connections

Malonyl-CoA is the donor for malonyl-ACP.
acyl_carrier -> malonyl_transacylation Provides Input For
ND-ACP is the acceptor of the malonyl group and carries the chain through each cycle.
Malonyl-ACP is condensed with the acyl primer.
The 3-oxoacyl-ACP is reduced to 3-hydroxyacyl-ACP.
After dehydration, the trans-2-enoyl-ACP is reduced by Mecr.
Part 1: carboxylation of acetyl-CoA to malonyl-CoA
Malonyl-CoA supplyReactionmalonyl_coa_supply

Annotons

Acc Malonyl-CoA supply
malonyl_coa_supply_acc
Participant: Gene Product: Acc
Gene Product:

Function

acetyl-CoA carboxylase activityGO:0003989
Part 2: carrier of the growing acyl chain
Mitochondrial acyl carrier proteinMetabolic Pathwayacyl_carrier

Annotons

ND-ACP Mitochondrial acyl carrier protein
acyl_carrier_nd_acp
Participant: Gene Product: ND-ACP
Gene Product:

Function

acyl carrier activityGO:0000036
Part 3: step 1, malonyl-CoA to malonyl-ACP
Malonyl transfer to ACPReactionmalonyl_transacylation

Annotons

beg Malonyl transfer to ACP
malonyl_transacylation_beg
Participant: Gene Product: beg
Gene Product:

Function

[acyl-carrier-protein] S-malonyltransferase activityGO:0004314
Part 4: step 2, Claisen condensation
Condensation to 3-oxoacyl-ACPReactionketoacyl_condensation

Annotons

CG12170 Condensation to 3-oxoacyl-ACP
ketoacyl_condensation_cg12170
Participant: Gene Product: CG12170
Gene Product:

Function

3-oxoacyl-[acyl-carrier-protein] synthase activityGO:0004315
Part 5: step 3, 3-ketoacyl-ACP reduction
Reduction of 3-oxoacyl-ACPReactionketoacyl_reduction

Annotons

CG3603 Reduction of 3-oxoacyl-ACP
ketoacyl_reduction_cg3603
Participant: Gene Product: CG3603
Gene Product:
Part 6: step 5, enoyl-ACP reduction
Reduction of trans-2-enoyl-ACPReactionenoyl_reduction

Annotons

Mecr Reduction of trans-2-enoyl-ACP
enoyl_reduction_mecr
Participant: Gene Product: Mecr
Gene Product:

Function

enoyl-[acyl-carrier-protein] reductase (NADPH) activityGO:0141148