Retromer complex in Drosophila melanogaster

Retromer retrieves transmembrane cargo from endosomes and returns it to the trans-Golgi network or to the plasma membrane. Its cargo-selective core is a heterotrimer of Vps35, Vps26 and Vps29 that recognizes sorting motifs in cargo tails; it associates with sorting nexins, including the SNX-BAR proteins Snx1 and Snx6, which bind endosomal phosphoinositides and shape membrane tubules. In Drosophila, retromer recycles the Wnt cargo receptor Wntless (Wls) to the Golgi, which is needed for Wingless secretion, and it also maintains rhodopsin and other cargo in photoreceptors.

MODULE:dmel_retromerDRAFTCONCRETEProtein Complexmodules/dmel_retromer.yaml
retromer complexGO:0030904
FB:FBgg0000196
FlyBase gene group RETRO: Retromer complex
FlyBase release FB2026_03 groups 5 D. melanogaster genes as retromer complex (RETRO); this module models that group.
GO:0030904
retromer complex
GO term grounding the module as retromer complex.

Decomposition. The cargo-selective trimer and the SNX-BAR sorting nexin pair are modelled as separate parts; the SNX-BAR proteins associate with the trimer less stably than the trimer subunits associate with each other. Snx3 and the WASH complex, which also cooperate with retromer, are outside this module. The cargo-selective trimer is given cargo adaptor activity (GO:0140312) at complex level; Vps35 and Vps29 carry this term in GOA by IBA, and Vps35 and Vps26 carry cargo receptor activity by IPI. The SNX-BAR pair carries only phosphoinositide-binding terms and has no annoton function. FlyBase groups realized by this module: RETRO (FBgg0000196). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_retromer.yaml. Member genes with a gene review in this repository: Snx1, Snx6, Vps26, Vps29, Vps35.

3Nodes
2Parts
0Variant Sets
0Variants
2Annotons
0Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_retromer deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

0 gene-function check(s) reflected in core functions · 0 conflict(s) · 0 evidence or coverage gap(s) (1 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
cargo_selective_complex_complex PROTEIN_COMPLEX
Gene
cargo adaptor activity
GO:0140312
Participant Unchecked
No direct UniProt participant to compare. Abstract selectors and complex-wide activities cannot be inferred from donor or subunit gene reviews.

Gene-review completeness (5/5 grounded genes reviewed)

5 complete review(s) · 5 with deep research · 0 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Snx1 Q9VQQ6 ✓ ✓ ✓
Snx6 M9NDI3 ✓ ✓ ✓
Vps26 Q9W552 ✓ ✓ ✓
Vps29 Q9VPX5 ✓ ✓ ✓
Vps35 Q9W277 ✓ ✓ ✓

Details

Context
Drosophila melanogasterNCBITaxon:7227
endosomeGO:0005768
RetromerProtein Complexdmel_retromer

Vps35-Vps26-Vps29 cargo-selective complex with SNX-BAR sorting nexins that retrieves cargo from endosomes to the Golgi and plasma membrane.

retromer complexGO:0030904
Context
Drosophila melanogasterNCBITaxon:7227
endosomeGO:0005768
Part 1: cargo recognition trimer
Retromer cargo-selective complexProtein Complexcargo_selective_complex

Annotons

Retromer cargo-selective complex
cargo_selective_complex_complex
Participant: Protein Complex: Retromer cargo-selective complex
Protein Complex:
Retromer cargo-selective complexGO:0030906
Active units:
Vps35
Participant: Gene Product: Vps35
Gene Product:
Vps26
Participant: Gene Product: Vps26
Gene Product:
Vps29
Participant: Gene Product: Vps29
Gene Product:

Function

cargo adaptor activityGO:0140312

Processes

retrograde transport, endosome to GolgiGO:0042147
Part 2: membrane-remodelling sorting nexins
SNX-BAR sorting nexinsProtein Complexsnx_bar_dimer

Annotons

SNX-BAR sorting nexins
snx_bar_dimer_complex
Participant: Protein Complex: SNX-BAR sorting nexins
Protein Complex:
SNX-BAR sorting nexins
Active units:
Snx1
Participant: Gene Product: Snx1
Gene Product:
Snx6
Participant: Gene Product: Snx6
Gene Product: