KEOPS threonylcarbamoyl transferase complex in Drosophila melanogaster

The KEOPS (EKC) complex transfers a threonylcarbamoyl group onto adenosine 37 of tRNAs that decode ANN codons, forming t6A, a modification needed for accurate decoding. Threonylcarbamoyl-AMP is supplied by a separate enzyme (Sua5/YRDC). The catalytic subunit is the Kae1/OSGEP ortholog (Tcs3 in flies); Bud32/TP53RK (Tcs5) is an atypical kinase-like ATPase subunit and Pcc1/LAGE3 (Tcs6) is a small dimerization subunit. In Drosophila, KEOPS subunits are required for growth.

MODULE:dmel_threonylcarbamoyl_transferase_complexDRAFTCONCRETEProtein Complexmodules/dmel_threonylcarbamoyl_transferase_complex.yaml
EKC/KEOPS complexGO:0000408
FB:FBgg0001634
FlyBase gene group TCTC: Threonyl-carbamoyl transferase complex
FlyBase release FB2026_03 groups 3 D. melanogaster genes as threonyl-carbamoyl transferase complex (TCTC); this module models that group.
GO:0000408
EKC/KEOPS complex
GO term grounding the module as EKC/KEOPS complex.

Modelled one part per subunit. The Cgi121 (TPRKB) and Gon7 subunits found in yeast and human KEOPS are not in the FlyBase group and are not included. The mitochondrial t6A enzyme (OSGEPL1 ortholog) and YRDC are outside this module. FlyBase groups realized by this module: TCTC (FBgg0001634). Participants were generated from the FlyBase gene-group membership and mapped to UniProtKB by projects/FLYBASE_GENE_GROUPS/generate_modules.py from module_specs/dmel_threonylcarbamoyl_transferase_complex.yaml. Member genes with a gene review in this repository: Tcs3, Tcs5, Tcs6.

4Nodes
3Parts
0Variant Sets
0Variants
3Annotons
0Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:dmel_threonylcarbamoyl_transferase_complex deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

1 gene-function check(s) reflected in core functions · 0 conflict(s) · 0 evidence or coverage gap(s) (1 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
tcs3_subunit_tcs3 Tcs3
UniProtKB:Q9VV41
Gene
tRNA N(6)-L-threonylcarbamoyladenine synthase activity
GO:0061711
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).

Gene-review completeness (3/3 grounded genes reviewed)

3 complete review(s) · 3 with deep research · 0 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
Tcs3 Q9VV41 ✓ ✓ ✓
Tcs5 Q9VRJ6 ✓ ✓ ✓
Tcs6 E1JIY8 ✓ ✓ ✓

Details

Context
Drosophila melanogasterNCBITaxon:7227
KEOPS complexProtein Complexdmel_threonylcarbamoyl_transferase_complex

Cytoplasmic KEOPS complex that forms t6A at tRNA position 37.

EKC/KEOPS complexGO:0000408
Context
Drosophila melanogasterNCBITaxon:7227
Part 1: catalytic subunit (Kae1/OSGEP)
Tcs3 subunitProtein Complextcs3_subunit

Annotons

Tcs3 Tcs3 subunit
tcs3_subunit_tcs3
Participant: Gene Product: Tcs3
Gene Product:

Function

tRNA N(6)-L-threonylcarbamoyladenine synthase activityGO:0061711

Processes

tRNA threonylcarbamoyladenosine modificationGO:0002949
Part 2: kinase-like ATPase subunit (Bud32/TP53RK)
Tcs5 subunitProtein Complextcs5_subunit

Annotons

Tcs5 Tcs5 subunit
tcs5_subunit_tcs5
Participant: Gene Product: Tcs5
Gene Product:

Processes

tRNA threonylcarbamoyladenosine modificationGO:0002949
Part 3: dimerization subunit (Pcc1/LAGE3)
Tcs6 subunitProtein Complextcs6_subunit

Annotons

Tcs6 Tcs6 subunit
tcs6_subunit_tcs6
Participant: Gene Product: Tcs6
Gene Product:

Processes

tRNA threonylcarbamoyladenosine modificationGO:0002949