Function
Processes
Activates glucose 1-phosphate as dTDP-glucose for downstream deoxy-sugar conversion.
Species-neutral bacterial module for synthesis of the activated sugar dTDP-L-rhamnose from alpha-D-glucose 1-phosphate. The pathway proceeds through dTDP-glucose formation, dTDP-glucose 4,6-dehydration, dTDP-4-dehydrorhamnose 3,5-epimerization, and final NADPH-dependent reduction to dTDP-L-rhamnose. The module represents the soluble nucleotide-sugar supply pathway and treats downstream O-antigen, LPS, and specialized-polysaccharide assembly reactions as consumers, not as part of the biosynthetic module itself.
The PP_1782-PP_1785 rfbC-rfbA-rfbD-rffG cluster provides a complete PSEPK implementation. PP_0265 is an additional RmlC-family epimerase; PP_0500 is an additional RmlD-family protein whose physiological substrate remains an open question. Representative members are exemplars, not simultaneously required pathway components. Downstream O-antigen and glycan assembly are product-use context outside this module boundary. PSEPK gene reviews accept cytosol for the soluble enzymes, but location is omitted from this reusable reaction module because it is not a defining constraint and repeating it on the module plus every annoton would add no pathway discrimination.
All recommended fields populated.
✓ present
✓ every leaf node grounds to a representative protein.
✓ every declared conforms_to bundle matches its template motif.
5 complete review(s) · 2 with deep research · 4 missing review · 3 reviewed but lacking deep research
| Gene | Review | Complete | Deep research |
|---|---|---|---|
| E. coli K-12 RmlA exemplar P37744 | ✗ | — | — |
| E. coli K-12 RmlC exemplar P37745 | ✗ | — | — |
| E. coli K-12 RmlB exemplar P37759 | ✗ | — | — |
| E. coli K-12 RmlD exemplar P37760 | ✗ | — | — |
| rfbA Q88LZ3 | ✓ | ✓ | ✗ |
| rfbC Q88LZ4 | ✓ | ✓ | ✓ |
| rfbD Q88LZ2 | ✓ | ✓ | ✗ |
| rffG Q88LZ1 | ✓ | ✓ | ✓ |
| rmlC Q88R69 | ✓ | ✓ | ✗ |
Activates glucose 1-phosphate as dTDP-glucose for downstream deoxy-sugar conversion.
Converts dTDP-glucose to the 4-keto-6-deoxy intermediate used by the RmlC/RfbC epimerase step.
Epimerizes the deoxy-keto sugar nucleotide toward the L-rhamnose stereochemistry. PSEPK contains both PP_0265 and the cluster-encoded PP_1782 as representatives of this role.
Cluster-encoded reductase that completes dTDP-L-rhamnose synthesis. PP_0500 is excluded as a representative because its physiological substrate remains unresolved.