Function
Locations
Regenerate cytosolic acetyl-CoA from mitochondria-exported citrate.
De novo lipogenesis builds long-chain saturated fatty acids (chiefly palmitate, C16:0) from carbohydrate- derived carbon in the cytosol, supplying membrane lipids, storage triacylglycerol and signalling precursors. Citrate exported from mitochondria is cleaved by ATP-citrate lyase (ACLY) to regenerate cytosolic acetyl-CoA (plus oxaloacetate); this acetyl-CoA also feeds cholesterol synthesis and protein acetylation. Acetyl-CoA carboxylase then carboxylates acetyl-CoA to malonyl-CoA in the committed, rate- limiting step - a biotin-dependent reaction carried out by two isozymes with distinct roles: the cytosolic ACACA (ACC1) supplies malonyl-CoA for fatty acid synthesis, whereas ACACB (ACC2), anchored at the mitochondrial outer membrane, makes a malonyl-CoA pool that inhibits carnitine palmitoyltransferase 1 and thereby restrains fatty acid beta-oxidation. Fatty acid synthase (FASN), a homodimeric multifunctional megaenzyme, then condenses one acetyl-CoA primer with seven malonyl-CoA units in iterative NADPH-dependent cycles - using its ketoacyl-synthase, malonyl/acetyl-transacylase, ketoacyl-reductase, dehydratase, enoyl- reductase, acyl-carrier and thioesterase activities - to produce palmitate. The auxiliary thioesterase OLAH (thioesterase II) can release medium-chain fatty acids early from the FASN acyl-carrier, shifting the product spectrum (e.g. in lactating mammary gland). ACLY, ACACA and FASN are central to lipogenic tissues and are cancer and metabolic-disease drug targets.
All recommended fields populated.
✗ none found
No MODULE:fatty_acid_de_novo_synthesis deep-research report alongside the module YAML.
✓ every leaf node grounds to a representative protein.
✓ every declared conforms_to bundle matches its template motif.
5 complete review(s) · 0 with deep research · 0 missing review · 5 reviewed but lacking deep research
| Gene | Review | Complete | Deep research |
|---|---|---|---|
| ACACA Q13085 | ✓ | ✓ | ✗ |
| ACACB O00763 | ✓ | ✓ | ✗ |
| ACLY P53396 | ✓ | ✓ | ✗ |
| FASN P49327 | ✓ | ✓ | ✗ |
| OLAH Q9NV23 | ✓ | ✓ | ✗ |
De novo fatty acid synthesis / lipogenesis (GO:0006633), grounded to five completed human gene reviews. Cytosolic pathway: ACLY (P53396 PTHR23118, GO:0003878) citrate -> acetyl-CoA + OAA; ACC (biotin-dependent, GO:0003989) acetyl-CoA -> malonyl-CoA - two isozymes, both PTHR45728, modelled on one node: ACACA/ACC1 (Q13085, cytosolic, lipogenic, rate-limiting) and ACACB/ACC2 (O00763, mitochondrial-outer-membrane GO:0005741, its malonyl-CoA inhibits CPT1 to restrain beta-oxidation - a regulatory role, captured in the ACACB review as negative regulation of fatty acid beta-oxidation); FASN (P49327 PTHR43775, GO:0004312, + seven partial-domain activities in its review) condenses acetyl-CoA + 7 malonyl-CoA (NADPH) -> palmitate; OLAH/thioesterase II (Q9NV23 PTHR11487, GO:0016297) releases medium-chain fatty acids early (mammary gland). Node locations are cytosol (the lipogenic compartment); ACACB's mito-OM location and FAO- regulatory role are noted in its gene review. Curation: ACACA mitochondrion IBA is a paralog/compartment mis-propagation (that is ACACB); OLAH acyl-CoA-hydrolase IEAs are homology-inferred vs its physiological acyl-ACP preference. Drug/cancer targets (ACLY/ACACA/FASN). GO term ids/labels verified against the local go.db; module passes structural + term-label validation.
Regenerate cytosolic acetyl-CoA from mitochondria-exported citrate.
Carboxylate acetyl-CoA to malonyl-CoA (committed, rate-limiting step).
Assemble palmitate by iterative condensation/reduction cycles.
Release medium-chain fatty acids from the FASN acyl-carrier.