Galactose catabolism (Leloir pathway)

The Leloir pathway, the main route by which dietary D-galactose (chiefly from the milk sugar lactose) is converted to glucose-1-phosphate and thereby fed into glycolysis and general carbohydrate metabolism. It is a short cytosolic pathway of four enzymes. Galactose mutarotase (GALM/aldose 1-epimerase) first equilibrates the β- and α-anomers of D-galactose, supplying the α-anomer; galactokinase (GALK1) then phosphorylates α-D-galactose with ATP to α-D-galactose 1-phosphate; galactose-1-phosphate uridylyltransferase (GALT) transfers a UMP group from UDP-glucose to galactose-1-phosphate, producing glucose-1-phosphate (which enters glycolysis/glycogen metabolism via phosphoglucomutase) and UDP-galactose; and UDP-galactose-4-epimerase (GALE) interconverts UDP-galactose and UDP-glucose, regenerating the UDP-glucose that GALT consumes and balancing the UDP-galactose pool used for glycoconjugate synthesis. Because GALT both consumes UDP-glucose and (via GALE) regenerates it, the pathway is catalytic in UDP-sugars: only a trace pool is needed to turn over large amounts of galactose. Each enzyme has a corresponding inherited galactosemia: GALT deficiency causes classic galactosemia (type I, severe neonatal toxicity); GALK1 deficiency causes type II (predominantly cataracts, from galactitol); GALE deficiency causes type III (epimerase deficiency, peripheral to generalized); and GALM deficiency causes type IV. The shared toxic intermediates are galactose-1-phosphate and, via aldose reductase, galactitol.

MODULE:galactose_leloir_pathwayDRAFTMetabolic Pathwaymodules/galactose_leloir_pathway.yaml
galactose catabolic process via UDP-galactose, Leloir pathwayGO:0033499 galactose metabolic processGO:0006012
GO:0006012
galactose metabolic process
The module is grounded in the GO galactose metabolic/catabolic process terms (GO:0006012, GO:0019388, and the Leloir-specific GO:0033499); every step is annotated within them.
Reactome:R-HSA-70370
Galactose catabolism
Step order and reaction stoichiometries follow the human Reactome "Galactose catabolism" pathway (R-HSA-70370) and its member reactions (R-HSA-9931853, R-HSA-70355, R-HSA-70361, R-HSA-70369).
file:human/GALM/GALM-ai-review.yaml
GALM gene review (human)
The GALM step grounding (UniProtKB:Q96C23, GO:0004034 aldose 1-epimerase activity) matches the completed human GALM review.
file:human/GALK1/GALK1-ai-review.yaml
GALK1 gene review (human)
The GALK1 step grounding (UniProtKB:P51570, GO:0004335 galactokinase activity, EC 2.7.1.6) matches the completed human GALK1 review.
file:human/GALT/GALT-ai-review.yaml
GALT gene review (human)
The GALT step grounding (UniProtKB:P07902, GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity, EC 2.7.7.12) matches the completed human GALT review.
file:human/GALE/GALE-ai-review.yaml
GALE gene review (human)
The GALE step grounding (UniProtKB:Q14376, GO:0003978 UDP-glucose 4-epimerase activity, EC 5.1.3.2) matches the completed human GALE review.
5Nodes
4Parts
0Variant Sets
0Variants
4Annotons
4Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:galactose_leloir_pathway deep-research report alongside the module YAML.

Leaf nodes lacking representative members

every leaf node grounds to a representative protein.

Template conformance

every declared conforms_to bundle matches its template motif.

Gene-review completeness (4/4 grounded genes reviewed)

4 complete review(s) · 1 with deep research · 0 missing review · 3 reviewed but lacking deep research

Gene Review Complete Deep research
GALE Q14376
GALK1 P51570
GALM Q96C23
GALT P07902

Details

Context
cytosolGO:0005829
Galactose catabolism (Leloir pathway)Metabolic Pathwaygalactose_leloir_pathway
galactose catabolic process via UDP-galactose, Leloir pathwayGO:0033499 galactose metabolic processGO:0006012
Context
cytosolGO:0005829

Four-enzyme cytosolic Leloir pathway grounded to the human enzymes GALM (UniProtKB:Q96C23, GO:0004034, EC 5.1.3.3), GALK1 (P51570, GO:0004335, EC 2.7.1.6), GALT (P07902, GO:0008108, EC 2.7.7.12) and GALE (Q14376, GO:0003978, EC 5.1.3.2). GO molecular-function terms were taken from the human GOA records; Reactome reaction ids and titles were verified against the local reactome cache. Each step uses a PANTHER family selector (generic over paralogs and orthologs) plus a concrete human representative member; these enzymes are essentially single-copy in humans. Downstream, glucose-1-phosphate enters glycolysis/glycogen metabolism (via phosphoglucomutase, PGM1) and UDP-galactose feeds glycoconjugate (glycoprotein/glycolipid) synthesis; these fates and the toxic galactose-1-phosphate / galactitol intermediates of galactosemia are noted in the step role descriptions but are out of scope for this catabolic module.

Connections

galm_step -> galk1_step Provides Input For
alpha-D-galactose from GALM is the substrate phosphorylated by GALK1.
galk1_step -> galt_step Provides Input For
alpha-D-galactose 1-phosphate from GALK1 is the substrate of GALT.
galt_step -> gale_step Provides Input For
UDP-galactose produced by GALT is epimerised by GALE to UDP-glucose.
gale_step -> galt_step Provides Input For
UDP-glucose regenerated by GALE is the co-substrate GALT requires, closing the UDP-sugar recycling loop that makes the pathway catalytic in UDP-glucose.
Part 1: anomer preparation (mutarotation)
beta-D-galactose to alpha-D-galactoseReactiongalm_step

Annotons

GALM: galactose mutarotase / aldose 1-epimerase
galm_activity
Participant: Family: Aldose 1-epimerase (mutarotase) family (GALM)
Family:
Aldose 1-epimerase (mutarotase) family (GALM)PANTHER:PTHR10091
Representative Members: GALM (human)UniProtKB:Q96C23

Function

aldose 1-epimerase activityGO:0004034
Substrates: beta-D-galactose
Products: alpha-D-galactose

Locations

cytosolGO:0005829

Accelerates the anomeric equilibration of D-galactose to supply the alpha-anomer required by galactokinase (and likewise mutarotates glucose). Deficiency causes galactosemia type IV.

Part 2: phosphorylation (committed step)
alpha-D-galactose + ATP to alpha-D-galactose 1-phosphate + ADPReactiongalk1_step

Annotons

GALK1: galactokinase
galk1_activity
Participant: Family: Galactokinase (GHMP kinase) family (GALK1)
Family:
Galactokinase (GHMP kinase) family (GALK1)PANTHER:PTHR10457
Representative Members: GALK1 (human)UniProtKB:P51570

Function

galactokinase activityGO:0004335
Substrates: alpha-D-galactose ATP
Products: alpha-D-galactose 1-phosphate ADP

Locations

cytosolGO:0005829

First committed step: ATP-dependent phosphorylation of galactose to galactose-1-phosphate (GHMP-kinase superfamily). Deficiency causes galactosemia type II, dominated by early cataracts from galactitol accumulation.

Part 3: uridylyl transfer (central step)
alpha-D-galactose 1-phosphate + UDP-glucose to glucose-1-phosphate + UDP-galactoseReactiongalt_step

Annotons

GALT: galactose-1-phosphate uridylyltransferase
galt_activity
Participant: Family: Galactose-1-phosphate uridylyltransferase family (GALT)
Family:
Galactose-1-phosphate uridylyltransferase family (GALT)PANTHER:PTHR11943
Representative Members: GALT (human)UniProtKB:P07902

Function

UDP-glucose:hexose-1-phosphate uridylyltransferase activityGO:0008108
Substrates: alpha-D-galactose 1-phosphate UDP-glucose
Products: glucose-1-phosphate UDP-galactose

Locations

cytosolGO:0005829

Central double-displacement step (covalent UMP-His enzyme intermediate; HIT superfamily): converts galactose-1-phosphate to glucose-1-phosphate (which enters glycolysis/glycogen metabolism via phosphoglucomutase) while regenerating UDP-galactose. Deficiency causes classic galactosemia (type I), the most severe form.

Part 4: UDP-sugar recycling (regenerates UDP-glucose for GALT)
UDP-galactose to UDP-glucose (reversible)Reactiongale_step

Annotons

GALE: UDP-galactose-4-epimerase
gale_activity
Participant: Family: UDP-glucose 4-epimerase family (GALE)
Family:
UDP-glucose 4-epimerase family (GALE)PANTHER:PTHR43725
Representative Members: GALE (human)UniProtKB:Q14376

Function

UDP-glucose 4-epimerase activityGO:0003978
Substrates: UDP-galactose NAD+ (tightly bound cofactor)
Products: UDP-glucose

Locations

cytosolGO:0005829

NAD+-dependent epimerization that regenerates the UDP-glucose consumed by GALT (making the pathway catalytic in UDP-sugars) and balances the UDP-galactose pool used for glycoconjugate synthesis. The human enzyme is bifunctional, also epimerizing UDP-GlcNAc / UDP-GalNAc. Deficiency causes galactosemia type III.