Glycerol-3-phosphate shuttle (GPD1 + GPD2)

The glycerol-3-phosphate (glycerophosphate) shuttle is the second mechanism, alongside the malate-aspartate shuttle, for delivering cytosolic reducing equivalents to the mitochondrial respiratory chain — and the dominant one in tissues such as brown adipose tissue, skeletal muscle and pancreatic beta-cells. Unlike the malate-aspartate shuttle it is unidirectional and feeds electrons directly into the ubiquinone pool rather than to Complex I, so it yields fewer ATP per cytosolic NADH but operates rapidly. In the cytosol, the NAD-linked glycerol-3-phosphate dehydrogenase GPD1 reduces dihydroxyacetone phosphate (DHAP) to sn-glycerol-3-phosphate, oxidising a cytosolic NADH to NAD+. The glycerol-3-phosphate then diffuses to the outer face of the inner mitochondrial membrane, where the FAD-dependent glycerol-3-phosphate dehydrogenase GPD2 (mGPDH) re-oxidises it back to DHAP and passes the two electrons through its FAD cofactor to ubiquinone, reducing it to ubiquinol; the DHAP returns to the cytosol to complete the cycle. Because GPD2 faces the intermembrane space, no metabolite crosses the inner membrane. GPD1 also supplies glycerol-3-phosphate for glycerolipid/triacylglycerol synthesis; loss-of-function of GPD1 causes transient infantile hypertriglyceridemia, and the shuttle is important in beta-cell glucose-stimulated insulin secretion.

MODULE:glycerol_phosphate_shuttleDRAFTMetabolic Pathwaymodules/glycerol_phosphate_shuttle.yaml
glycerol-3-phosphate shuttleGO:0006127
GO:0006127
glycerol-3-phosphate shuttle
The module is grounded in the glycerol-3-phosphate shuttle (GO:0006127) — transfer of cytosolic reducing equivalents to the mitochondrial ubiquinone pool via glycerol-3-phosphate.
file:human/GPD1/GPD1-ai-review.yaml
GPD1 gene review (human)
The cytosolic NAD-linked glycerol-3-phosphate dehydrogenase step (UniProtKB:P21695, GO:0141152) matches the completed human GPD1 review.
file:human/GPD2/GPD2-ai-review.yaml
GPD2 gene review (human)
The mitochondrial FAD-linked glycerol-3-phosphate dehydrogenase (quinone) step (UniProtKB:P43304, GO:0004368) matches the completed human GPD2 review.
3Nodes
2Parts
0Variant Sets
0Variants
2Annotons
1Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:glycerol_phosphate_shuttle deep-research report alongside the module YAML.

Leaf nodes lacking representative members

✓ every leaf node grounds to a representative protein.

Template conformance

✓ every declared conforms_to bundle matches its template motif.

Function consistency and core coverage

2 gene-function check(s) reflected in core functions · 0 conflict(s) · 1 evidence or coverage gap(s) (4 comparison(s))

Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.

AnnotonParticipantFunctionAssessment
gpd1_activity GPD1 (human)
UniProtKB:P21695
Family Representative
glycerol-3-phosphate dehydrogenase (NAD+) activity
GO:0141152
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
gpd2_activity GPD2 (human)
UniProtKB:P43304
Family Representative
glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0004368
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass).
gpd1_activity NAD-dependent glycerol-3-phosphate dehydrogenase (GPD1) family
PANTHER:PTHR11728
Family
glycerol-3-phosphate dehydrogenase (NAD+) activity
GO:0141152
Family Supported
Family review supports GO:0141152 FAMILY_WIDE. Every subfamily is an NAD-dependent glycerol-3-phosphate dehydrogenase (human GPD1, S. cerevisiae GPD1/GPD2, S. pombe gpd1/gpd2, fly Gpdh, bacterial GpsA), as glycerol_metabolism selects.
gpd2_activity FAD-dependent glycerol-3-phosphate dehydrogenase (GPD2) family
PANTHER:PTHR11985
Family
glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0004368
Family Scope Restricted
GO:0004368 is SUBFAMILY_ONLY; this family grounding does not establish the allowed subfamily scope. SF15 (selected by glycerol_metabolism and by bacterial_glycerol_uptake_catabolism, whose GlpD exemplars E. coli P13035 and P. putida Q88NY0 are SF15 members) and SF31; the glycerol_phosphate_shuttle module selects the base family.

Gene-review completeness (2/2 grounded genes reviewed)

2 complete review(s) · 0 with deep research · 0 missing review · 2 reviewed but lacking deep research

Gene Review Complete Deep research
GPD1 P21695 ✓ ✓ ✗
GPD2 P43304 ✓ ✓ ✗

Details

Context
cytosolGO:0005829 mitochondrial inner membraneGO:0005743
Glycerol-3-phosphate shuttleMetabolic Pathwayglycerol_phosphate_shuttle
glycerol-3-phosphate shuttleGO:0006127
Context
cytosolGO:0005829 mitochondrial inner membraneGO:0005743

The glycerol-3-phosphate shuttle (GO:0006127), grounded to the completed human gene reviews: cytosolic NAD-linked GPD1 (P21695, GO:0141152 — note GO:0004367 is obsolete for the NAD+ term) reduces DHAP to glycerol-3-phosphate consuming a cytosolic NADH; mitochondrial FAD-linked GPD2/ mGPDH (P43304, GO:0004368 quinone activity + GO:0050660 FAD binding) re-oxidises it and passes electrons via FAD to ubiquinone. Net: cytosolic reducing equivalents enter the respiratory chain at the ubiquinone pool (bypassing Complex I), complementary to the malate-aspartate shuttle (curated in malate_aspartate_shuttle). The shuttle feeds the same ubiquinone pool used by Complexes I and II → Complex III. GO term ids/labels verified against the local go.db. GPD2 faces the intermembrane space so no metabolite crosses the inner membrane. Disorders/physiology: GPD1 loss causes transient infantile hypertriglyceridemia; the shuttle drives beta-cell glucose-stimulated insulin secretion and thermogenesis.

Connections

gps_cytosolic -> gps_mitochondrial Provides Input For
GPD1 supplies sn-glycerol-3-phosphate that GPD2 re-oxidises at the inner membrane; the DHAP that GPD2 regenerates returns to the cytosol for GPD1, closing the shuttle cycle.
Part 1: cytosolic NAD-linked half-reaction (oxidises cytosolic NADH)
Cytosolic NAD-linked GPD (GPD1)Reactiongps_cytosolic

Annotons

GPD1: cytosolic NAD-dependent glycerol-3-phosphate dehydrogenase
gpd1_activity
Participant: Family: NAD-dependent glycerol-3-phosphate dehydrogenase (GPD1) family
Family:
NAD-dependent glycerol-3-phosphate dehydrogenase (GPD1) familyPANTHER:PTHR11728
Representative Members: GPD1 (human)UniProtKB:P21695

Function

glycerol-3-phosphate dehydrogenase (NAD+) activityGO:0141152
Substrates: dihydroxyacetone phosphate (DHAP) NADH (cytosolic)
Products: sn-glycerol 3-phosphate NAD+

Locations

cytosolGO:0005829

Reduces DHAP to glycerol-3-phosphate, consuming a cytosolic NADH.

Part 2: mitochondrial FAD-linked half-reaction (electrons to ubiquinone)
Mitochondrial FAD-linked GPD (GPD2)Reactiongps_mitochondrial

Annotons

GPD2 (mGPDH): mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase
gpd2_activity
Participant: Family: FAD-dependent glycerol-3-phosphate dehydrogenase (GPD2) family
Family:
FAD-dependent glycerol-3-phosphate dehydrogenase (GPD2) familyPANTHER:PTHR11985
Representative Members: GPD2 (human)UniProtKB:P43304

Function

glycerol-3-phosphate dehydrogenase (quinone) activityGO:0004368
Substrates: sn-glycerol 3-phosphate ubiquinone (via FAD cofactor)
Products: dihydroxyacetone phosphate (DHAP) ubiquinol

Locations

mitochondrial inner membraneGO:0005743

Re-oxidises glycerol-3-phosphate to DHAP, feeding electrons to ubiquinone.