Function
Locations
Provides UDP-glucose, the activated glucosyl donor for glycogen synthesis (and for galactose/Leloir metabolism, glycosylation and glucuronidation). Deficiency causes developmental and epileptic encephalopathy 83.
Glycogen biosynthesis is the cytosolic pathway that builds the branched glucose polymer glycogen from the activated sugar donor UDP-glucose, storing glucose for later mobilisation. Four steps: UDP-glucose pyrophosphorylase (UGP2) activates glucose-1-phosphate with UTP to form UDP-glucose + pyrophosphate; glycogenin (GYG1) primes synthesis by autoglucosylating a specific tyrosine, using UDP-glucose to build a short covalently-attached alpha-1,4-glucan (~8-12 residues) that nucleates the granule; glycogen synthase (muscle GYS1, liver GYS2) then elongates the chain by processively adding UDP-glucose-derived glucose units in alpha-1,4 linkage; and the glycogen branching enzyme (GBE1) transfers ~6-7-residue segments to internal positions via alpha-1,6 linkages, creating the branches that make glycogen soluble and multiply the non-reducing ends for both synthesis and later degradation. Glycogen synthase is the rate-controlling, tightly regulated step (inhibited by phosphorylation, allosterically activated by glucose-6-phosphate). Inherited defects define disorders across the pathway: UGP2 deficiency causes a developmental and epileptic encephalopathy; GYG1 deficiency causes glycogen storage disease type XV (polyglucosan-body myopathy/cardiomyopathy); GYS2 deficiency causes hepatic glycogen storage disease type 0a (fasting ketotic hypoglycemia) and GYS1 deficiency muscle GSD 0b (cardiomyopathy, sudden death); and GBE1 deficiency causes GSD type IV (Andersen disease) and adult polyglucosan body disease — accumulation of poorly branched, amylopectin-like polyglucosan.
All recommended fields populated.
✗ none found
No MODULE:glycogen_biosynthesis deep-research report alongside the module YAML.
✓ every leaf node grounds to a representative protein.
✓ every declared conforms_to bundle matches its template motif.
5 complete review(s) · 0 with deep research · 0 missing review · 5 reviewed but lacking deep research
| Gene | Review | Complete | Deep research |
|---|---|---|---|
| GBE1 Q04446 | ✓ | ✓ | ✗ |
| GYG1 P46976 | ✓ | ✓ | ✗ |
| GYS1 P13807 | ✓ | ✓ | ✗ |
| GYS2 P54840 | ✓ | ✓ | ✗ |
| UGP2 Q16851 | ✓ | ✓ | ✗ |
Four-step cytosolic glycogen biosynthesis grounded to the human enzymes UGP2 (UniProtKB:Q16851; GO:0003983, EC 2.7.7.9), glycogenin GYG1 (P46976; GO:0008466, EC 2.4.1.186), glycogen synthase GYS1 (P13807) / GYS2 (P54840) (GO:0004373, EC 2.4.1.11) and branching enzyme GBE1 (Q04446; GO:0003844, EC 2.4.1.18). GO molecular-function terms were taken from the human GOA records; Reactome reaction ids and titles were verified against the local reactome cache. The glycogen-synthase step uses a PANTHER family selector (PTHR10176) generic over GYS1/GYS2 and orthologs, with both human isoforms as representative members; GYG1 (PTHR11183, family also includes GYG2), UGP2 (PTHR43511) and GBE1 (PTHR43651) likewise use family selectors plus a human representative. This is the biosynthetic counterpart of the glycogenolysis module (PYGL/PYGM, AGL, PGM1): glucose-1-phosphate is the shared branch metabolite (PGM1 links the two directions), and glycogenin/synthase form the granule that phosphorylase later degrades. UGP2's UDP-glucose also feeds galactose (Leloir) metabolism and glycosylation (noted, out of scope here). Disorders: UGP2 -> DEE83; GYG1 -> GSD XV; GYS1 -> muscle GSD 0b; GYS2 -> liver GSD 0a; GBE1 -> GSD IV (Andersen) / adult polyglucosan body disease.
Provides UDP-glucose, the activated glucosyl donor for glycogen synthesis (and for galactose/Leloir metabolism, glycosylation and glucuronidation). Deficiency causes developmental and epileptic encephalopathy 83.
Mn2+-dependent, self-glucosylating initiator: builds a short covalently attached alpha-1,4-glucan primer (~8-12 residues on a Tyr) that nucleates the glycogen granule and is elongated by glycogen synthase (with which it forms a complex). Deficiency causes GSD XV (polyglucosan-body myopathy).
Rate-controlling, allosterically- and phosphorylation-regulated enzyme that processively elongates the alpha-1,4 chains from the glycogenin primer using UDP-glucose. Tissue isoforms: GYS1 (muscle, GSD 0b) and GYS2 (liver, GSD 0a).
Introduces the alpha-1,6 branch points by transferring ~6-7-residue segments from a growing alpha-1,4 chain to internal positions, increasing solubility and the number of non-reducing ends. Deficiency causes GSD IV (Andersen disease) and adult polyglucosan body disease.