Pentose phosphate pathway (oxidative branch)Metabolic Pathwaypentose_phosphate_oxidative_branch
pentose-phosphate shunt, oxidative branchGO:0009051
Three-step oxidative branch of the pentose phosphate pathway grounded to the human enzymes G6PD (UniProtKB:P11413, GO:0004345, EC 1.1.1.49), PGLS (O95336, GO:0017057, EC 3.1.1.31) and PGD (P52209, GO:0004616, EC 1.1.1.44). GO molecular-function terms were taken from the human GOA records; Reactome reaction ids and titles were verified against the local reactome cache. Each step uses a PANTHER family selector (generic over orthologs) with the human enzyme as representative. Net output per glucose-6-phosphate: 2 NADPH + 1 CO2 + ribulose-5-phosphate. Downstream, ribulose-5-phosphate enters the non-oxidative branch (RPE, RPIA, TKT, TALDO1) and provides ribose-5-phosphate for PRPP / nucleotide synthesis (a separate module, to follow). Upstream, glucose-6-phosphate is the shared hub with glycolysis (via GPI), glycogen metabolism (PGM1) and the glucose-6-phosphatase system. G6PD-generated NADPH also supports the glutathione antioxidant system and NADPH oxidases. Of these three enzymes only G6PD has a common Mendelian disease (X-linked deficiency / favism, the most prevalent human enzymopathy); PGLS and PGD are included for pathway completeness. The distinct ER-lumenal G6PD paralog H6PD (hexose-6-phosphate dehydrogenase), which supplies NADPH for 11beta-HSD1 glucocorticoid activation, is a separate system and not part of this cytosolic module.
Connections
The 6-phosphogluconolactone from G6PD is hydrolysed by PGLS.
The 6-phosphogluconate from PGLS is oxidatively decarboxylated by PGD.
Part 1: committed, rate-limiting dehydrogenation (1st NADPH)
D-glucose-6-phosphate + NADP+ to 6-phospho-D-glucono-1,5-lactone + NADPHReactiong6pd_step
Annotons
G6PD: glucose-6-phosphate dehydrogenase
g6pd_activity
Participant: Family: Glucose-6-phosphate dehydrogenase family (G6PD)
Function
glucose-6-phosphate dehydrogenase activityGO:0004345
Substrates:
D-glucose 6-phosphate
NADP+
Products:
6-phospho-D-glucono-1,5-lactone
NADPH
Locations
Rate-limiting, committed step; principal cytosolic NADPH source (reductive biosynthesis and erythrocyte glutathione antioxidant defense). Requires a structural NADP+; dimer/tetramer. X-linked G6PD deficiency = favism (most common human enzymopathy).
Part 2: hydrolysis of the labile lactone
6-phospho-D-glucono-1,5-lactone + H2O to 6-phospho-D-gluconateReactionpgls_step
Annotons
PGLS: 6-phosphogluconolactonase
pgls_activity
Participant: Family: 6-phosphogluconolactonase / glucosamine-6-P isomerase family (PGLS)
Function
6-phosphogluconolactonase activityGO:0017057
Substrates:
6-phospho-D-glucono-1,5-lactone
water
Products:
6-phospho-D-gluconate
Locations
Hydrolyses the labile 6-phosphogluconolactone from G6PD to 6-phosphogluconate, preventing accumulation of the reactive intermediate. No established Mendelian disease; included as the middle oxidative-PPP step.
Part 3: oxidative decarboxylation to ribulose-5-phosphate (2nd NADPH)
6-phospho-D-gluconate + NADP+ to D-ribulose-5-phosphate + CO2 + NADPHReactionpgd_step
Annotons
PGD: 6-phosphogluconate dehydrogenase (decarboxylating)
pgd_activity
Participant: Family: 6-phosphogluconate dehydrogenase family (PGD)
Function
phosphogluconate dehydrogenase (decarboxylating) activityGO:0004616
Substrates:
6-phospho-D-gluconate
NADP+
Products:
D-ribulose 5-phosphate
CO2
NADPH
Locations
Oxidative decarboxylation of 6-phosphogluconate to ribulose-5-phosphate + CO2, producing the second NADPH. Its product ribulose-5-phosphate enters the non-oxidative branch (and ribose-5-phosphate for nucleotide synthesis).