Function
Locations
Farnesylate the cysteine of CAAX (X=M/S/Q/A) proteins (FPP donor).
Prenylation is a lipid post-translational modification that irreversibly attaches a farnesyl (C15) or geranylgeranyl (C20) isoprenoid — supplied as FPP/GGPP from the mevalonate pathway — to C-terminal cysteines of ~300 human proteins (Ras, Rho, Rac, Rab and other small GTPases, nuclear lamins, kinases), anchoring them to membranes and enabling signalling and vesicular trafficking. Three heterodimeric prenyltransferases do the attachment. Farnesyltransferase (FTase = the shared alpha subunit FNTA + the beta subunit FNTB) and geranylgeranyltransferase type I (GGTase-I = FNTA + PGGT1B) recognise a C-terminal CAAX motif directly and prenylate its cysteine — FTase when X is Met/Ser/Gln/Ala, GGTase-I when X is Leu/Phe. Rab geranylgeranyltransferase (GGTase-II / RabGGTase = RABGGTA + RABGGTB) instead double-geranylgeranylates the C-terminal CC/CXC cysteines of Rab GTPases, which must first be presented by the Rab escort protein REP1/REP2 (CHM/CHML). For the CAAX (FTase/GGTase-I) substrates, two further ER-membrane maturation steps follow: the glutamate-type intramembrane protease RCE1 removes the -AAX tripeptide, exposing the prenylcysteine as the new C-terminus, and the SAM-dependent methyltransferase ICMT carboxymethylates that prenylcysteine, maximising hydrophobicity and membrane affinity. The pathway is a major anticancer target (Ras farnesylation; FTIs) and underlies Hutchinson-Gilford progeria (lamin A prenylation). RabGGTase/REP defects cause choroideremia (via CHM), and RCE1/ICMT are Ras-pathway drug targets.
All recommended fields populated.
✗ none found
No MODULE:protein_prenylation_caax_processing deep-research report alongside the module YAML.
✓ every leaf node grounds to a representative protein.
✓ every declared conforms_to bundle matches its template motif.
4 gene-function check(s) reflected in core functions · 0 conflict(s) · 6 evidence or coverage gap(s) (10 comparison(s))
Retained noncore functions are reported separately; they do not require promotion to core functions. Support from representative genes does not establish conservation across the whole family. Missing reviews or identifiers leave a claim unverified.
| Annoton | Participant | Function | Assessment |
|---|---|---|---|
| fntb_activity | FNTB (human; FTase beta/catalytic) UniProtKB:P49356 Family Representative |
protein farnesyltransferase activity GO:0004660 |
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass). |
| pggt1b_activity | PGGT1B (human; GGTase-I beta/catalytic) UniProtKB:P53609 Family Representative |
CAAX-protein geranylgeranyltransferase activity GO:0004662 |
Annotation Supported
A retained annotation or curated replacement supports this function, but core_functions does not yet reflect it. |
| rabggt_activity | RABGGTB (human; RabGGTase beta/catalytic) UniProtKB:P53611 Family Representative |
Rab geranylgeranyltransferase activity GO:0004663 |
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass). |
| rce1_activity | RCE1 (human) UniProtKB:Q9Y256 Family Representative |
glutamic-type CAAX endopeptidase activity GO:0070002 |
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass). |
| icmt_activity | ICMT (human) UniProtKB:O60725 Family Representative |
protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity GO:0004671 |
Core Supported
The GO molecular function is reflected in core_functions (exact term or a reviewed subclass). |
| fntb_activity | FNTB / prenyltransferase beta-subunit family PANTHER:PTHR11774 Family |
protein farnesyltransferase activity GO:0004660 |
Family Review Missing
No supported structured family review is available for PANTHER:PTHR11774. |
| pggt1b_activity | PGGT1B / prenyltransferase beta-subunit family PANTHER:PTHR11774 Family |
CAAX-protein geranylgeranyltransferase activity GO:0004662 |
Family Review Missing
No supported structured family review is available for PANTHER:PTHR11774. |
| rabggt_activity | RABGGT / prenyltransferase beta-subunit family PANTHER:PTHR11774 Family |
Rab geranylgeranyltransferase activity GO:0004663 |
Family Review Missing
No supported structured family review is available for PANTHER:PTHR11774. |
| rce1_activity | RCE1 / prenyl-protein CAAX endoprotease (U48) family PANTHER:PTHR13046 Family |
glutamic-type CAAX endopeptidase activity GO:0070002 |
Family Review Missing
No supported structured family review is available for PANTHER:PTHR13046. |
| icmt_activity | ICMT / isoprenylcysteine carboxyl methyltransferase family PANTHER:PTHR12714 Family |
protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity GO:0004671 |
Family Review Missing
No supported structured family review is available for PANTHER:PTHR12714. |
5 complete review(s) · 0 with deep research · 0 missing review · 5 reviewed but lacking deep research
| Gene | Review | Complete | Deep research |
|---|---|---|---|
| FNTB P49356 | ✓ | ✓ | ✗ |
| ICMT O60725 | ✓ | ✓ | ✗ |
| PGGT1B P53609 | ✓ | ✓ | ✗ |
| RABGGTB P53611 | ✓ | ✓ | ✗ |
| RCE1 Q9Y256 | ✓ | ✓ | ✗ |
Protein prenylation and CAAX processing (GO:0018344 + GO:0071586), grounded to seven completed human gene reviews. PRENYLATION (cytosol): FTase = FNTA (P49354, shared alpha, PTHR11129) + FNTB (P49356 PTHR11774, catalytic beta, GO:0004660) farnesylates CAAX (X=M/S/Q/A); GGTase-I = FNTA + PGGT1B (P53609 PTHR11774, GO:0004662) geranylgeranylates CAAX (X=L/F); RabGGTase/GGTase-II = RABGGTA (Q92696 PTHR11129, alpha) + RABGGTB (P53611 PTHR11774, catalytic beta, GO:0004663) double-geranylgeranylates Rab CC/CXC (Rab presented by REP1/REP2=CHM/CHML). FNTA modelled as the shared-alpha adaptor (contributes_to both FTase GO:0005965 and GGTase-I GO:0005953 complexes); the beta subunits carry the catalytic Zn2+. CAAX MATURATION (ER membrane, FTase/GGTase-I substrates only): RCE1 (Q9Y256 PTHR13046, GO:0070002 glutamate-type intramembrane protease — NOT metallo/cysteine; several obsolete protease terms corrected) removes -AAX; ICMT (O60725 PTHR12714, GO:0004671) carboxymethylates the prenylcysteine (SAM). FPP/GGPP donors come from the mevalonate/isoprenoid pathway (FDPS/GGPS1, separate). Recurrent curation: bare protein-binding IPIs over-annotated (mostly the cognate alpha/beta subunit or REP1); the choroideremia (visual perception) annotations belong to CHM/REP1, not the RabGGTase subunits (flagged). GO term ids/labels verified against the local go.db. Anticancer FTIs (Ras), Hutchinson-Gilford progeria (lamin A), choroideremia (CHM/REP1).
Farnesylate the cysteine of CAAX (X=M/S/Q/A) proteins (FPP donor).
Geranylgeranylate the cysteine of CAAX (X=L/F) proteins (GGPP donor).
Double-geranylgeranylate Rab GTPase CC/CXC cysteines (via REP escort).
Cleave the -AAX tripeptide from prenylated CAAX proteins (ER).
Carboxymethylate the C-terminal prenylcysteine (final CAAX maturation step).