Glycerolipid / triacylglycerol biosynthesis (glycerol-phosphate pathway) (GPAM -> AGPAT2 -> LPIN1 -> DGAT1/2)

Triacylglycerol (TAG) is the principal energy-storage lipid, assembled from glycerol-3-phosphate and fatty acyl-CoAs by the glycerol-phosphate pathway, whose intermediate diacylglycerol is also the branch point to the major glycerophospholipids. Glycerol-3-phosphate acyltransferase (GPAM/GPAT1, at the mitochondrial outer membrane) performs the first, committed and rate-limiting acylation of sn-glycerol-3-phosphate at sn-1 to lysophosphatidic acid (LPA). 1-Acylglycerol-3-phosphate O-acyltransferase (AGPAT2/LPAAT-beta, at the ER) acylates LPA at sn-2 to phosphatidic acid (PA). The Mg2+-dependent phosphatidate phosphatase lipin-1 (LPIN1) dephosphorylates PA to diacylglycerol (DAG); LPIN1 additionally moonlights in the nucleus as a transcriptional coregulator of lipid-metabolism genes. Finally the diacylglycerol O-acyltransferases DGAT1 (an ER MBOAT-family enzyme with broad acyl-acceptor specificity) and DGAT2 (the ER/lipid-droplet DGAT2- family enzyme that is the quantitatively major TAG synthase) esterify DAG at sn-3 with a fatty acyl-CoA to form TAG - the final, dedicated step, which packages TAG into cytoplasmic lipid droplets. Defects cause metabolic disease: AGPAT2 and (via the pathway) other steps cause congenital generalized lipodystrophy, LPIN1 causes recurrent childhood rhabdomyolysis, and DGAT1 causes a congenital diarrhoea / protein-losing enteropathy.

MODULE:triacylglycerol_biosynthesisDRAFTMetabolic Pathwaymodules/triacylglycerol_biosynthesis.yaml
triglyceride biosynthetic processGO:0019432 phosphatidic acid biosynthetic processGO:0006654 diacylglycerol biosynthetic processGO:0006651
GO:0019432
triglyceride biosynthetic process
GPAM, AGPAT2, LPIN1 and DGAT1/2 synthesise triacylglycerol (GO:0019432).
GO:0006654
phosphatidic acid biosynthetic process
GPAM + AGPAT2 build phosphatidic acid, the pathway's central intermediate (GO:0006654).
GO:0006651
diacylglycerol biosynthetic process
LPIN1 produces diacylglycerol, the branch point to TAG and phospholipids (GO:0006651).
file:human/GPAM/GPAM-ai-review.yaml
GPAM gene review (human)
Glycerol-3-phosphate acyltransferase 1 (UniProtKB:Q9HCL2, GO:0004366) matches the completed human GPAM review.
file:human/AGPAT2/AGPAT2-ai-review.yaml
AGPAT2 gene review (human)
1-acylglycerol-3-phosphate O-acyltransferase 2 (UniProtKB:O15120, GO:0003841) matches the completed human AGPAT2 review.
file:human/LPIN1/LPIN1-ai-review.yaml
LPIN1 gene review (human)
Lipin-1 phosphatidate phosphatase (UniProtKB:Q14693, GO:0008195) matches the completed human LPIN1 review.
file:human/DGAT1/DGAT1-ai-review.yaml
DGAT1 gene review (human)
Diacylglycerol O-acyltransferase 1 (UniProtKB:O75907, GO:0004144) matches the completed human DGAT1 review.
file:human/DGAT2/DGAT2-ai-review.yaml
DGAT2 gene review (human)
Diacylglycerol O-acyltransferase 2 (UniProtKB:Q96PD7, GO:0004144) matches the completed human DGAT2 review.
5Nodes
4Parts
0Variant Sets
0Variants
5Annotons
3Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:triacylglycerol_biosynthesis deep-research report alongside the module YAML.

Leaf nodes lacking representative members

every leaf node grounds to a representative protein.

Template conformance

every declared conforms_to bundle matches its template motif.

Gene-review completeness (5/5 grounded genes reviewed)

5 complete review(s) · 0 with deep research · 0 missing review · 5 reviewed but lacking deep research

Gene Review Complete Deep research
AGPAT2 O15120
DGAT1 O75907
DGAT2 Q96PD7
GPAM Q9HCL2
LPIN1 Q14693

Details

Context
endoplasmic reticulum membraneGO:0005789 mitochondrial outer membraneGO:0005741
Glycerolipid / triacylglycerol biosynthesisMetabolic Pathwaytriacylglycerol_biosynthesis
triglyceride biosynthetic processGO:0019432 phosphatidic acid biosynthetic processGO:0006654 diacylglycerol biosynthetic processGO:0006651
Context
endoplasmic reticulum membraneGO:0005789 mitochondrial outer membraneGO:0005741

Glycerolipid / triacylglycerol biosynthesis, glycerol-phosphate pathway (GO:0019432), grounded to five completed human gene reviews. G3P -> LPA: GPAM/GPAT1 (Q9HCL2 PTHR12563, GO:0004366, mitochondrial outer membrane, first committed rate-limiting step); LPA -> PA: AGPAT2/LPAAT-beta (O15120 PTHR10434, GO:0003841, ER); PA -> DAG: LPIN1 (Q14693 PTHR12181, GO:0008195, Mg2+ PAP1, ER/cytosol; also nuclear coregulator - kept non-core in its review); DAG -> TAG: DGAT1 (O75907 PTHR10408, MBOAT family, broad acceptor) and DGAT2 (Q96PD7 PTHR12317, DGAT2 family, major TAG synthase, ER/lipid-droplet), both GO:0004144, modelled as two annotons on the final node. DAG is the branch point shared with glycerophospholipid synthesis (Kennedy pathway, separately reviewed). Curation: GPAM plasma-membrane IEA removed (bacterial PlsB ancestry vs mito- OM); DGAT1 triacylglycerol-lipase term is a Rhea-direction artifact (over-annotated); DGAT1/DGAT2 minor MGAT/retinol/wax activities and DGAT2 rodent-ortholog physiology terms kept non-core; several neutrophil-degranulation Reactome plasma-membrane/granule TAS are wrong-compartment for these ER enzymes. Diseases: AGPAT2 = CGL1, LPIN1 = rhabdomyolysis, DGAT1 = congenital diarrhoea. GO term ids/labels verified against the local go.db; module passes structural + term-label validation.

Connections

g3p_acylation -> lpa_acylation Provides Input For
GPAM-made LPA is acylated by AGPAT2 to phosphatidic acid.
lpa_acylation -> pa_dephosphorylation Provides Input For
AGPAT2-made phosphatidic acid is dephosphorylated by LPIN1 to DAG.
pa_dephosphorylation -> dag_acylation Provides Input For
LPIN1-made DAG is esterified by DGAT1/DGAT2 to triacylglycerol.
Part 1: G3P acylation (glycerol-3-P -> LPA)
Glycerol-3-phosphate acyltransferase (GPAM/GPAT1)Reactiong3p_acylation

Annotons

GPAM: glycerol-3-phosphate O-acyltransferase
gpam_activity
Participant: Family: GPAT / glycerophosphate O-acyltransferase family
Family:
GPAT / glycerophosphate O-acyltransferase familyPANTHER:PTHR12563
Representative Members: GPAM / GPAT1 (human)UniProtKB:Q9HCL2

Function

glycerol-3-phosphate O-acyltransferase activityGO:0004366
Substrates: sn-glycerol 3-phosphate long-chain acyl-CoA (prefers saturated)
Products: 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid, LPA) CoA

Locations

mitochondrial outer membraneGO:0005741

Acylate glycerol-3-phosphate at sn-1 to LPA.

Part 2: LPA acylation (LPA -> phosphatidic acid)
1-Acylglycerol-3-phosphate O-acyltransferase (AGPAT2/LPAAT-beta)Reactionlpa_acylation

Annotons

AGPAT2: 1-acylglycerol-3-phosphate O-acyltransferase
agpat2_activity
Participant: Family: AGPAT / 1-acylglycerol-3-phosphate O-acyltransferase family
Family:
AGPAT / 1-acylglycerol-3-phosphate O-acyltransferase familyPANTHER:PTHR10434
Representative Members: AGPAT2 / LPAAT-beta (human)UniProtKB:O15120

Function

1-acylglycerol-3-phosphate O-acyltransferase activityGO:0003841
Substrates: lysophosphatidic acid (LPA) long-chain acyl-CoA
Products: phosphatidic acid (PA) CoA

Locations

endoplasmic reticulum membraneGO:0005789

Acylate LPA at sn-2 to phosphatidic acid.

Part 3: PA dephosphorylation (PA -> DAG)
Phosphatidate phosphatase lipin-1 (LPIN1)Reactionpa_dephosphorylation

Annotons

LPIN1: phosphatidate phosphatase (PAP1)
lpin1_activity
Participant: Family: Lipin / phosphatidate phosphatase family
Family:
Lipin / phosphatidate phosphatase familyPANTHER:PTHR12181
Representative Members: LPIN1 / lipin-1 (human)UniProtKB:Q14693

Function

phosphatidate phosphatase activityGO:0008195
Substrates: phosphatidic acid (PA; Mg2+) H2O
Products: 1,2-diacyl-sn-glycerol (DAG) phosphate

Locations

endoplasmic reticulum membraneGO:0005789

Dephosphorylate PA to DAG (translocates cytosol<->ER).

Part 4: DAG acylation (DAG -> triacylglycerol)
Diacylglycerol O-acyltransferase (DGAT1 MBOAT / DGAT2)Reactiondag_acylation

Annotons

DGAT1: diacylglycerol O-acyltransferase (MBOAT)
dgat1_activity
Participant: Family: DGAT1 / MBOAT acyltransferase family
Family:
DGAT1 / MBOAT acyltransferase familyPANTHER:PTHR10408
Representative Members: DGAT1 (human)UniProtKB:O75907

Function

diacylglycerol O-acyltransferase activityGO:0004144
Substrates: 1,2-diacyl-sn-glycerol (DAG) long-chain acyl-CoA
Products: triacylglycerol (TAG) CoA

Locations

endoplasmic reticulum membraneGO:0005789

Esterify DAG at sn-3 to TAG (MBOAT family).

DGAT2: diacylglycerol O-acyltransferase (DGAT2 family)
dgat2_activity
Participant: Family: DGAT2 / MOGAT-DGAT2 acyltransferase family
Family:
DGAT2 / MOGAT-DGAT2 acyltransferase familyPANTHER:PTHR12317
Representative Members: DGAT2 (human)UniProtKB:Q96PD7

Function

diacylglycerol O-acyltransferase activityGO:0004144
Substrates: 1,2-diacyl-sn-glycerol (DAG) long-chain acyl-CoA (prefers unsaturated)
Products: triacylglycerol (TAG) CoA

Locations

lipid dropletGO:0005811

Esterify DAG at sn-3 to TAG (DGAT2 family; ER/lipid-droplet).