Valine and isoleucine distal catabolism (acyl-CoA dehydrogenase -> propionyl-CoA)

After the shared, mitochondrial branched-chain aminotransferase (BCAT2) and branched-chain alpha-ketoacid dehydrogenase (BCKDH) steps deaminate and oxidatively decarboxylate the three branched-chain amino acids to their acyl-CoA thioesters, valine and isoleucine follow their own distal degradation routes in the mitochondrial matrix that converge on propionyl-CoA. In the VALINE route, isobutyryl-CoA is dehydrogenated by isobutyryl-CoA dehydrogenase (ACAD8, an FAD enzyme feeding electrons to ETF) to methacrylyl-CoA; the crotonase ECHS1 (curated elsewhere) hydrates this to (S)-3-hydroxyisobutyryl-CoA, which the crotonase-superfamily hydrolase HIBCH deacylates to free 3-hydroxyisobutyrate + CoA (a step thought to detoxify the reactive methacrylyl-CoA). 3-Hydroxy- isobutyrate dehydrogenase (HIBADH, NAD+) then oxidises it to (S)-methylmalonate semialdehyde, and the CoA-acylating aldehyde dehydrogenase ALDH6A1 (methylmalonate-semialdehyde dehydrogenase) oxidatively decarboxylates that to propionyl-CoA. In the ISOLEUCINE route, 2-methylbutyryl-CoA is dehydrogenated by the short/branched-chain acyl-CoA dehydrogenase ACADSB (FAD -> ETF) to tiglyl-CoA; ECHS1 hydrates it, and HSD17B10 (the moonlighting SDR protein MRPP2/HADH2, in its 2-methyl-3-hydroxybutyryl-CoA dehydrogenase role, NAD+) oxidises 2-methyl-3-hydroxybutyryl-CoA to 2-methylacetoacetyl-CoA, which the thiolase ACAT1 (curated elsewhere) cleaves to propionyl-CoA + acetyl-CoA. The propionyl-CoA produced by both routes enters the propionyl-CoA -> methylmalonyl-CoA -> succinyl-CoA anaplerotic pathway (PCC/MUT). Inherited defects at each step cause distinct organic acidurias (ACAD8: isobutyryl-CoA dehydrogenase deficiency; ACADSB: 2-methylbutyryl-CoA dehydrogenase deficiency; HIBCH and ALDH6A1: valine-pathway neurometabolic disease; HSD17B10: X-linked MHBD deficiency, which also impairs the protein's separate mitochondrial RNase P role).

MODULE:valine_isoleucine_distal_catabolismDRAFTMetabolic Pathwaymodules/valine_isoleucine_distal_catabolism.yaml
L-valine catabolic processGO:0006574 L-isoleucine catabolic processGO:0006550
GO:0006574
L-valine catabolic process
ACAD8/HIBCH/HIBADH/ALDH6A1 carry out the distal steps of L-valine catabolism (GO:0006574).
GO:0006550
L-isoleucine catabolic process
ACADSB and HSD17B10 carry out distal steps of L-isoleucine catabolism (GO:0006550).
file:human/ACAD8/ACAD8-ai-review.yaml
ACAD8 gene review (human)
The isobutyryl-CoA dehydrogenase step (UniProtKB:Q9UKU7, GO:0003853 + FAD) matches the completed human ACAD8 review.
file:human/HIBCH/HIBCH-ai-review.yaml
HIBCH gene review (human)
The 3-hydroxyisobutyryl-CoA hydrolase step (UniProtKB:Q6NVY1, GO:0003860) matches the completed human HIBCH review.
file:human/HIBADH/HIBADH-ai-review.yaml
HIBADH gene review (human)
The 3-hydroxyisobutyrate dehydrogenase step (UniProtKB:P31937, GO:0008442) matches the completed human HIBADH review.
file:human/ALDH6A1/ALDH6A1-ai-review.yaml
ALDH6A1 gene review (human)
The methylmalonate-semialdehyde dehydrogenase step (UniProtKB:Q02252, GO:0004491) matches the completed human ALDH6A1 review.
file:human/ACADSB/ACADSB-ai-review.yaml
ACADSB gene review (human)
The 2-methylbutyryl-CoA dehydrogenase step (UniProtKB:P45954, GO:0003853 + FAD) matches the completed human ACADSB review.
file:human/HSD17B10/HSD17B10-ai-review.yaml
HSD17B10 gene review (human)
The 2-methyl-3-hydroxybutyryl-CoA dehydrogenase (MHBD) step (UniProtKB:Q99714, GO:0047015) matches the completed human HSD17B10 review.
7Nodes
6Parts
0Variant Sets
0Variants
6Annotons
4Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:valine_isoleucine_distal_catabolism deep-research report alongside the module YAML.

Leaf nodes lacking representative members

every leaf node grounds to a representative protein.

Template conformance

every declared conforms_to bundle matches its template motif.

Gene-review completeness (6/6 grounded genes reviewed)

6 complete review(s) · 0 with deep research · 0 missing review · 6 reviewed but lacking deep research

Gene Review Complete Deep research
ACAD8 Q9UKU7
ACADSB P45954
ALDH6A1 Q02252
HIBADH P31937
HIBCH Q6NVY1
HSD17B10 Q99714

Details

Context
mitochondrial matrixGO:0005759
Valine and isoleucine distal catabolismMetabolic Pathwayvaline_isoleucine_distal_catabolism
L-valine catabolic processGO:0006574 L-isoleucine catabolic processGO:0006550
Context
mitochondrial matrixGO:0005759

Distal valine and isoleucine catabolism (GO:0006574 / GO:0006550), grounded to six completed human gene reviews, all mitochondrial-matrix enzymes from distinct PANTHER families. VALINE branch: ACAD8 (Q9UKU7 PTHR43831, GO:0003853 + FAD) -> [ECHS1] -> HIBCH (Q6NVY1 PTHR43176, GO:0003860) -> HIBADH (P31937 PTHR22981, GO:0008442 + NAD) -> ALDH6A1 (Q02252 PTHR43866, GO:0004491 acylating + GO:0018478) -> propionyl-CoA. ISOLEUCINE branch: ACADSB (P45954 PTHR43884, GO:0003853 + FAD) -> [ECHS1] -> HSD17B10 (Q99714 PTHR43658, GO:0047015 MHBD + NAD) -> [ACAT1 thiolase] -> propionyl-CoA + acetyl-CoA. Both branches feed propionyl-CoA into the PCC/MUT anaplerotic route (curated separately). ALDH6A1 is shared with pyrimidine/beta-alanine catabolism (malonate-semialdehyde -> acetyl-CoA, GO:0018478 / GO:0006210). HSD17B10 is a moonlighting protein: its second, non-catalytic role as the mt-RNase P subunit MRPP2 (mitochondrial tRNA 5'-processing and m1A9/m1G9 methylation) is documented in the HSD17B10 gene review and is deliberately NOT modelled as a metabolic node here. The FAD-linked ACAD8/ACADSB steps deposit electrons on ETF/ETFDH (curated in the flavin/ETF modules). GO term ids/labels verified against the local go.db. Disorders: ACAD8 IBDD; ACADSB 2-methylbutyryl-CoA dehydrogenase deficiency; HIBCH and ALDH6A1 valine-pathway neurometabolic disease; HSD17B10 X-linked MHBD deficiency.

Connections

acad8_ibd -> hibch_hydrolase Provides Input For
ACAD8 makes methacrylyl-CoA; the crotonase ECHS1 (curated elsewhere) hydrates it to (S)-3-hydroxyisobutyryl-CoA, the substrate deacylated by HIBCH.
hibch_hydrolase -> hibadh_dh Provides Input For
The 3-hydroxyisobutyrate released by HIBCH is oxidised by HIBADH.
hibadh_dh -> aldh6a1_mmsdh Provides Input For
HIBADH produces methylmalonate semialdehyde, the substrate for ALDH6A1.
acadsb_sbcad -> hsd17b10_mhbd Provides Input For
ACADSB makes tiglyl-CoA; ECHS1 (curated elsewhere) hydrates it to 2-methyl-3-hydroxybutyryl-CoA, the substrate oxidised by HSD17B10 (MHBD).
Part 1: valine - isobutyryl-CoA dehydrogenation
Isobutyryl-CoA dehydrogenase (ACAD8)Reactionacad8_ibd

Annotons

ACAD8: isobutyryl-CoA dehydrogenase
acad8_activity
Participant: Family: ACAD8 / isobutyryl-CoA dehydrogenase family
Family:
ACAD8 / isobutyryl-CoA dehydrogenase familyPANTHER:PTHR43831
Representative Members: ACAD8 (human)UniProtKB:Q9UKU7

Function

short-chain 2-methyl fatty acyl-CoA dehydrogenase activityGO:0003853
Substrates: isobutyryl-CoA electron-transfer flavoprotein (oxidized; via FAD)
Products: methacrylyl-CoA electron-transfer flavoprotein (reduced)

Locations

mitochondrial matrixGO:0005759

Dehydrogenates isobutyryl-CoA to methacrylyl-CoA (valine, FAD/ETF).

Part 2: valine - 3-hydroxyisobutyryl-CoA hydrolysis
3-Hydroxyisobutyryl-CoA hydrolase (HIBCH)Reactionhibch_hydrolase

Annotons

HIBCH: 3-hydroxyisobutyryl-CoA hydrolase
hibch_activity
Participant: Family: HIBCH / 3-hydroxyisobutyryl-CoA hydrolase (crotonase) family
Family:
HIBCH / 3-hydroxyisobutyryl-CoA hydrolase (crotonase) familyPANTHER:PTHR43176
Representative Members: HIBCH (human)UniProtKB:Q6NVY1

Function

3-hydroxyisobutyryl-CoA hydrolase activityGO:0003860
Substrates: (S)-3-hydroxyisobutyryl-CoA H2O
Products: 3-hydroxyisobutyrate coenzyme A

Locations

mitochondrial matrixGO:0005759

Hydrolyses 3-hydroxyisobutyryl-CoA to 3-hydroxyisobutyrate + CoA (valine).

Part 3: valine - 3-hydroxyisobutyrate oxidation
3-Hydroxyisobutyrate dehydrogenase (HIBADH)Reactionhibadh_dh

Annotons

HIBADH: 3-hydroxyisobutyrate dehydrogenase
hibadh_activity
Participant: Family: HIBADH / 3-hydroxyisobutyrate dehydrogenase family
Family:
HIBADH / 3-hydroxyisobutyrate dehydrogenase familyPANTHER:PTHR22981
Representative Members: HIBADH (human)UniProtKB:P31937

Function

3-hydroxyisobutyrate dehydrogenase activityGO:0008442
Substrates: 3-hydroxyisobutyrate NAD+
Products: (S)-methylmalonate semialdehyde NADH

Locations

mitochondrial matrixGO:0005759

Oxidises 3-hydroxyisobutyrate to methylmalonate semialdehyde (valine, NAD+).

Part 4: valine/pyrimidine - methylmalonate-semialdehyde oxidative decarboxylation
Methylmalonate-semialdehyde dehydrogenase (ALDH6A1)Reactionaldh6a1_mmsdh

Annotons

ALDH6A1: methylmalonate-semialdehyde dehydrogenase
aldh6a1_activity
Participant: Family: ALDH6A1 / methylmalonate-semialdehyde dehydrogenase family
Family:
ALDH6A1 / methylmalonate-semialdehyde dehydrogenase familyPANTHER:PTHR43866
Representative Members: ALDH6A1 (human)UniProtKB:Q02252

Function

methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activityGO:0004491
Substrates: (S)-methylmalonate semialdehyde coenzyme A NAD+
Products: propionyl-CoA CO2 NADH

Locations

mitochondrial matrixGO:0005759

Oxidatively decarboxylates methylmalonate semialdehyde to propionyl-CoA (valine).

Part 5: isoleucine - 2-methylbutyryl-CoA dehydrogenation
Short/branched-chain acyl-CoA dehydrogenase (ACADSB)Reactionacadsb_sbcad

Annotons

ACADSB: 2-methylbutyryl-CoA dehydrogenase
acadsb_activity
Participant: Family: ACADSB / short-branched-chain acyl-CoA dehydrogenase family
Family:
ACADSB / short-branched-chain acyl-CoA dehydrogenase familyPANTHER:PTHR43884
Representative Members: ACADSB (human)UniProtKB:P45954

Function

short-chain 2-methyl fatty acyl-CoA dehydrogenase activityGO:0003853
Substrates: (S)-2-methylbutyryl-CoA electron-transfer flavoprotein (oxidized; via FAD)
Products: tiglyl-CoA (2-methylbut-2-enoyl-CoA) electron-transfer flavoprotein (reduced)

Locations

mitochondrial matrixGO:0005759

Dehydrogenates 2-methylbutyryl-CoA to tiglyl-CoA (isoleucine, FAD/ETF).

Part 6: isoleucine - 2-methyl-3-hydroxybutyryl-CoA oxidation
2-Methyl-3-hydroxybutyryl-CoA dehydrogenase (HSD17B10)Reactionhsd17b10_mhbd

Annotons

HSD17B10 (MHBD): 2-methyl-3-hydroxybutyryl-CoA dehydrogenase
hsd17b10_activity
Participant: Family: HSD17B10 / type-2 3-hydroxyacyl-CoA dehydrogenase (SDR) family
Family:
HSD17B10 / type-2 3-hydroxyacyl-CoA dehydrogenase (SDR) familyPANTHER:PTHR43658
Representative Members: HSD17B10 (human)UniProtKB:Q99714

Function

3-hydroxy-2-methylbutyryl-CoA dehydrogenase activityGO:0047015
Substrates: (2S,3S)-2-methyl-3-hydroxybutyryl-CoA NAD+
Products: 2-methylacetoacetyl-CoA NADH

Locations

mitochondrial matrixGO:0005759

Oxidises 2-methyl-3-hydroxybutyryl-CoA to 2-methylacetoacetyl-CoA (isoleucine, NAD+).