matrisome masterlist: 1027 human genes BHF-UCL RCA rows: 688; distinct symbol x term pairs: 164 ## GO term x matrisome category (distinct symbol x term pairs) term | Collagens | ECM Glycoproteins | Proteoglycans | not in masterlist GO:0030020 | 42 | 0 | 0 | 1 GO:0030021 | 0 | 0 | 17 | 0 GO:0030023 | 0 | 9 | 0 | 0 GO:0005201 | 0 | 89 | 0 | 6 on the category->term diagonal: 148/164 (90.2%) ## Off-diagonal pairs (term not predicted by matrisome category) COL6A4 GO:0030020 (ECM structural constituent conferring tensile strength) matrisome: not in masterlist / not in masterlist EFEMP2 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins ELN GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins EMILIN1 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins EMILIN2 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins EMILIN3 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins FBLN2 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins FBLN5 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins LAMC1 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins MFAP1A GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist MFAP1B GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist MFAP5 GO:0030023 (ECM constituent conferring elasticity) matrisome: Core matrisome / ECM Glycoproteins Q95J98 GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist Q95J99 GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist Q95LE2 GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist TNX GO:0005201 (ECM structural constituent) matrisome: not in masterlist / not in masterlist ## Core-matrisome categories of the genes the BHF-UCL rows cover 92 ECM Glycoproteins 42 Collagens 17 Proteoglycans 7 not in masterlist ## Reviewed BHF-UCL matrisome rows (rca_reviewed_rows.yaml): category x action Collagens: 6 rows, ACCEPT=6 (100%); COL4A1 ACCEPT=6 ECM Glycoproteins: 36 rows, ACCEPT=21 (58%); MARK_AS_OVER_ANNOTATED=8, MODIFY=5, REMOVE=2 ABI3BP MARK_AS_OVER_ANNOTATED=3 ADIPOQ REMOVE=1 AGRN ACCEPT=4 COMP ACCEPT=1 DPT ACCEPT=5 FN1 ACCEPT=6 MGP MARK_AS_OVER_ANNOTATED=4 NID1 ACCEPT=5 SPARC REMOVE=1 THBS1 MODIFY=3 THBS2 MODIFY=2 THBS3 MARK_AS_OVER_ANNOTATED=1 Proteoglycans: 20 rows, ACCEPT=8 (40%); MARK_AS_OVER_ANNOTATED=5, MODIFY=5, REMOVE=2 ACAN ACCEPT=2 ASPN MARK_AS_OVER_ANNOTATED=5 DCN MODIFY=5 HSPG2 ACCEPT=6 PRG2 REMOVE=1 PRG3 REMOVE=1