entryType: UniProtKB unreviewed (TrEMBL)

scientificName: Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

source: EMBL

source: Proteomes

lineage: Eukaryota Fungi Dikarya Ascomycota Pezizomycotina Sordariomycetes Sordariomycetidae Sordariales Sordariaceae Neurospora

proteinExistence: 4: Predicted

value: Uncharacterized protein

type: Region

modifier: EXACT

description: Disordered

source: SAM

type: Coiled coil

Coiled coil

category: Domain

Reference proteome

category: Technical term

citationType: journal article

authors:
Galagan J.E.
Calvo S.E.
Borkovich K.A.
Selker E.U.
Read N.D.
Jaffe D.
FitzHugh W.
Ma L.J.
Smirnov S.
Purcell S.
Rehman B.
Elkins T.
Engels R.
Wang S.
Nielsen C.B.
Butler J.
Endrizzi M.
Qui D.
Ianakiev P.
Bell-Pedersen D.
Nelson M.A.
Werner-Washburne M.
Selitrennikoff C.P.
Kinsey J.A.
Braun E.L.
Zelter A.
Schulte U.
Kothe G.O.
Jedd G.
Mewes W.
Staben C.
Marcotte E.
Greenberg D.
Roy A.
Foley K.
Naylor J.
Stange-Thomann N.
Barrett R.
Gnerre S.
Kamal M.
Kamvysselis M.
Mauceli E.
Bielke C.
Rudd S.
Frishman D.
Krystofova S.
Rasmussen C.
Metzenberg R.L.
Perkins D.D.
Kroken S.
Cogoni C.
Macino G.
Catcheside D.
Li W.
Pratt R.J.
Osmani S.A.
DeSouza C.P.
Glass L.
Orbach M.J.
Berglund J.A.
Voelker R.
Yarden O.
Plamann M.
Seiler S.
Dunlap J.
Radford A.
Aramayo R.
Natvig D.O.
Alex L.A.
Mannhaupt G.
Ebbole D.J.
Freitag M.
Paulsen I.
Sachs M.S.
Lander E.S.
Nusbaum C.
Birren B.

database: PubMed

database: DOI

title: The genome sequence of the filamentous fungus Neurospora crassa.

journal: Nature

referencePositions: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

type: STRAIN

database: EMBL

key: ProteinId

key: Status

key: MoleculeType

database: RefSeq

key: NucleotideSequenceId

database: AlphaFoldDB

key: Description

database: PaxDb

database: GeneID

database: KEGG

database: VEuPathDB

database: HOGENOM

database: InParanoid

database: Proteomes

key: Component

value: Chromosome 4, Linkage Group IV


value: Homeobox domain-containing protein

commentType: SUBCELLULAR LOCATION

source: ARBA

source: PROSITE-ProRule

source: RuleBase

value: Nucleus

type: Domain

description: Homeobox

source: PROSITE

type: DNA binding

description: Homeobox

description: Disordered

type: Compositional bias

description: Polar residues

description: Low complexity

description: Polar residues

DNA-binding

category: Molecular function

Nucleus

category: Cellular component

database: STRING

database: OMA

key: Fingerprint

database: OrthoDB

value: Chromosome 2, Linkage Group V

database: GO

key: GoTerm

key: GoEvidenceType

value: F:DNA-binding transcription factor activity, RNA polymerase II-specific

value: F:RNA polymerase II cis-regulatory region sequence-specific DNA binding

value: P:cell differentiation

value: P:regulation of transcription by RNA polymerase II

value: HEMATOPOIETICALLY-EXPRESSED HOMEOBOX PROTEIN HHEX


proteinExistence: 3: Inferred from homology

source: Google

value: Belongs to the FMO family

commentType: SIMILARITY

FAD

category: Ligand

value: F:flavin adenine dinucleotide binding

value: F:NADP binding

database: FunFam

key: EntryName

value: Flavin-binding monooxygenase-like protein (AFU_orthologue AFUA_6G01900)

key: MatchStatus

value: FAD/NAD(P)-binding domain

database: InterPro

value: FMO-like

database: PANTHER

value: DIMETHYLANILINE MONOOXYGENASE

database: Pfam

database: SUPFAM


value: Vacuolar transporter chaperone complex subunit 4

value: Polyphosphate kinase

value: SPX-dependent polyphosphate polymerase VTC subunit 4

value: Vacuolar membrane polyphosphate polymerase catalytic subunit

commentType: CATALYTIC ACTIVITY

name: [phosphate](n) + ATP = [phosphate](n+1) + ADP

database: Rhea

database: ChEBI

directionType: left-to-right

commentType: COFACTOR

value: Vacuole membrane

value: Multi-pass membrane protein

value: Belongs to the VTC4 family

type: Transmembrane

description: Helical

description: Helical

description: Helical

description: SPX

description: Disordered

description: Acidic residues

description: Polar residues

description: Polar residues

database: PubMed

database: DOI

database: EMBL

database: RefSeq

database: AlphaFoldDB

database: SMR

database: FunCoup

key: Number of interactors

value: C:vacuolar transporter chaperone complex

value: VACUOLAR TRANSPORTER CHAPERONE 1-RELATED

value: VACUOLAR TRANSPORTER CHAPERONE COMPLEX SUBUNIT 4-RELATED


value: DNA replication licensing factor MCM4

value: DNA replication licensing factor mcm4

value: Nucleus

value: Belongs to the MCM family

value: Lacks conserved residue(s) required for the propagation of feature annotation

commentType: CAUTION

description: MCM C-terminal AAA(+) ATPase

description: Disordered

description: Disordered

description: Disordered

type: Motif

description: Walker A

description: Walker B

description: Basic residues

description: Polar residues

description: Polar residues

description: Low complexity

description: Polar residues

description: Polar residues

description: Basic and acidic residues

Cell cycle

category: Biological process

value: F:single-stranded 3'-5' DNA helicase activity

value: P:DNA strand elongation involved in DNA replication

value: P:double-strand break repair via break-induced replication

value: P:pre-replicative complex assembly involved in nuclear cell cycle DNA replication

value: mini-chromosome maintenance (MCM) complex, chain A, domain 1

value: P-loop containing nucleotide triphosphate hydrolases

value: DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER

value: P-loop containing nucleoside triphosphate hydrolases


scientificName: Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

lineage: Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella

value: 3-methylitaconate isomerase

value: Belongs to the PrpF family

authors:
Parkhill J.
Sebaihia M.
Preston A.
Murphy L.D.
Thomson N.R.
Harris D.E.
Holden M.T.G.
Churcher C.M.
Bentley S.D.
Mungall K.L.
Cerdeno-Tarraga A.-M.
Temple L.
James K.D.
Harris B.
Quail M.A.
Achtman M.
Atkin R.
Baker S.
Basham D.
Bason N.
Cherevach I.
Chillingworth T.
Collins M.
Cronin A.
Davis P.
Doggett J.
Feltwell T.
Goble A.
Hamlin N.
Hauser H.
Holroyd S.
Jagels K.
Leather S.
Moule S.
Norberczak H.
O'Neil S.
Ormond D.
Price C.
Rabbinowitsch E.
Rutter S.
Sanders M.
Saunders D.
Seeger K.
Sharp S.
Simmonds M.
Skelton J.
Squares R.
Squares S.
Stevens K.
Unwin L.
Whitehead S.
Barrell B.G.
Maskell D.J.

title: Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

journal: Nat. Genet.

value: Tohama I / ATCC BAA-589 / NCTC 13251

database: STRING

database: PaxDb

database: KEGG

database: PATRIC

key: GeneDesignation

database: eggNOG

key: ToxonomicScope

value: Bacteria

database: HOGENOM

database: Proteomes

value: Chromosome

value: Diaminopimelate Epimerase, Chain A, domain 1

value: PrpF-like

value: ACONITATE ISOMERASE-RELATED

value: DUF453 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_6G00360)

value: PrpF

value: Diaminopimelate epimerase-like