generated: '2026-10-28' generator: projects/PSEUDOCAP/build_iba_seed_worklist.py summary: pao1_seed_proteins: 471 pao1_node_term_seedings: 663 pseudocap_supported_proteins: 398 pseudocap_supported_seedings: 522 tier1_proteins: 109 sole_seeded_node_terms: 139 leaf_ibas_downstream: 51455 leaf_ibas_sole_seeded: 4772 genes: - uniprot: O33407 symbol: estA locus: PA5112 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 960 leaf_ibas_total: 1920 review_folder: null seedings: - node: PTN005219546 node_term: id: GO:0052689 label: carboxylic ester hydrolase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 960 leaf_taxa: 51 pseudocap_only_support: false supporting_annotations: - GO:0052689 carboxylic ester hydrolase activity | IMP | PMID:17631636 | PseudoCAP - GO:0106435 carboxylesterase activity | IDA | PMID:20931591 | UniProt - node: PTN005219546 node_term: id: GO:0008610 label: lipid biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 960 leaf_taxa: 51 pseudocap_only_support: false supporting_annotations: - GO:0008610 lipid biosynthetic process | IMP | PMID:17631636 | UniProt - GO:0009247 glycolipid biosynthetic process | IMP | PMID:17631636 | PseudoCAP rank: 1 - uniprot: Q9I0Q0 symbol: pqsH locus: PA2587 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 297 leaf_ibas_total: 297 review_folder: null seedings: - node: PTN008173107 node_term: id: GO:0004497 label: monooxygenase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 297 leaf_taxa: 43 pseudocap_only_support: true supporting_annotations: - GO:0004497 monooxygenase activity | IDA | PMID:20662781 | PseudoCAP rank: 2 - uniprot: Q9HZQ8 symbol: lap locus: PA2939 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 272 leaf_ibas_total: 272 review_folder: null seedings: - node: PTN000254534 node_term: id: GO:0006508 label: proteolysis ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 272 leaf_taxa: 109 pseudocap_only_support: true supporting_annotations: - GO:0006508 proteolysis | IDA | PMID:11533066 | PseudoCAP rank: 3 - uniprot: G3XD64 symbol: fleN locus: PA1454 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 149 leaf_ibas_total: 149 review_folder: null seedings: - node: PTN000344128 node_term: id: GO:0005524 label: ATP binding ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 149 leaf_taxa: 75 pseudocap_only_support: true supporting_annotations: - GO:0005524 ATP binding | IDA | PMID:10629180 | PseudoCAP rank: 4 - uniprot: Q9HTB2 symbol: PA5458 locus: PA5458 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 144 leaf_ibas_total: 144 review_folder: null seedings: - node: PTN000546715 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 113 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0009103 lipopolysaccharide biosynthetic process | IMP | PMID:23341552 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IDA | PMID:23341552 | PseudoCAP - node: PTN000546841 node_term: id: GO:0009103 label: lipopolysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 31 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0009103 lipopolysaccharide biosynthetic process | IMP | PMID:23341552 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IDA | PMID:23341552 | PseudoCAP rank: 5 - uniprot: Q9I3N5 symbol: ccmC locus: PA1477 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 143 leaf_ibas_total: 143 review_folder: null seedings: - node: PTN001247822 node_term: id: GO:0004096 label: catalase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 143 leaf_taxa: 59 pseudocap_only_support: true supporting_annotations: - GO:0004096 catalase activity | IMP | PMID:16824107 | PseudoCAP rank: 6 - uniprot: Q9I183 symbol: pvdE locus: PA2397 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 140 leaf_ibas_total: 140 review_folder: null seedings: - node: PTN000656738 node_term: id: GO:0042626 label: ATPase-coupled transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 140 leaf_taxa: 74 pseudocap_only_support: true supporting_annotations: - GO:0042626 ATPase-coupled transmembrane transporter activity | IMP | PMID:19787431 | PseudoCAP rank: 7 - uniprot: Q9I4V0 symbol: PA1024 locus: PA1024 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 122 leaf_ibas_total: 122 review_folder: null seedings: - node: PTN002844975 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 122 leaf_taxa: 69 pseudocap_only_support: false supporting_annotations: - GO:0016491 oxidoreductase activity | IDA | PMID:27502282 | PseudoCAP - GO:0050136 NADH dehydrogenase (quinone) (non-electrogenic) activity | EXP | PMID:27502282 | UniProt rank: 8 - uniprot: Q9HU91 symbol: hutI locus: PA5092 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 104 leaf_ibas_total: 104 review_folder: null seedings: - node: PTN000505272 node_term: id: GO:0006548 label: L-histidine catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 52 leaf_taxa: 50 pseudocap_only_support: true supporting_annotations: - GO:0006548 L-histidine catabolic process | IMP | PMID:4290562 | PseudoCAP - node: PTN000505272 node_term: id: GO:0050480 label: imidazolonepropionase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 52 leaf_taxa: 50 pseudocap_only_support: true supporting_annotations: - GO:0050480 imidazolonepropionase activity | IMP | PMID:4290562 | PseudoCAP rank: 9 - uniprot: Q9HWG9 symbol: phzS locus: PA4217 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 104 leaf_ibas_total: 104 review_folder: null seedings: - node: PTN002492679 node_term: id: GO:0004497 label: monooxygenase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 104 leaf_taxa: 19 pseudocap_only_support: false supporting_annotations: - GO:0004497 monooxygenase activity | IDA | PMID:17012792 | PseudoCAP - GO:0102169 5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity | EXP | PMID:17253782 | UniProt rank: 10 - uniprot: P22608 symbol: pilB locus: PA4526 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 90 leaf_ibas_total: 90 review_folder: null seedings: - node: PTN001250205 node_term: id: GO:0016887 label: ATP hydrolysis activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 90 leaf_taxa: 36 pseudocap_only_support: true supporting_annotations: - GO:0016887 ATP hydrolysis activity | IDA | PMID:18174131 | PseudoCAP rank: 11 - uniprot: Q9HWH2 symbol: phzM locus: PA4209 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 80 leaf_ibas_total: 80 review_folder: null seedings: - node: PTN002463933 node_term: id: GO:0008757 label: S-adenosylmethionine-dependent methyltransferase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 80 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0008757 S-adenosylmethionine-dependent methyltransferase activity | IDA | PMID:17253782 | PseudoCAP rank: 12 - uniprot: P21629 symbol: braF locus: PA1071 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 75 leaf_ibas_total: 100 review_folder: null seedings: - node: PTN000656921 node_term: id: GO:0042941 label: D-alanine transmembrane transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP - node: PTN000656921 node_term: id: GO:1903805 label: L-valine import across plasma membrane ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:1903805 L-valine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP - node: PTN000656921 node_term: id: GO:0015808 label: L-alanine transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0015808 L-alanine transport | IMP | PMID:18833300 | PseudoCAP - node: PTN000656921 node_term: id: GO:1903806 label: L-isoleucine import across plasma membrane ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:1903806 L-isoleucine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP rank: 13 - uniprot: G3XD01 symbol: wbpD locus: PA3156 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 75 leaf_ibas_total: 75 review_folder: null seedings: - node: PTN001917401 node_term: id: GO:0016407 label: acetyltransferase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 67 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0016407 acetyltransferase activity | EXP | PMID:19282284 | PseudoCAP - node: PTN001292385 node_term: id: GO:0006065 label: UDP-glucuronate biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0006065 UDP-glucuronate biosynthetic process | EXP | PMID:16102001 | PseudoCAP rank: 14 - uniprot: Q00518 symbol: xcpX locus: PA3097 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 70 leaf_ibas_total: 70 review_folder: null seedings: - node: PTN000475915 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 35 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:9466253 | PseudoCAP - node: PTN000475915 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 35 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 15 - uniprot: Q9HUG6 symbol: waaL locus: PA4999 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 64 leaf_ibas_total: 192 review_folder: null seedings: - node: PTN008076295 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 64 leaf_taxa: 31 pseudocap_only_support: false supporting_annotations: - GO:0008754 O-antigen ligase activity | EXP | PMID:17697256 | UniProt - GO:0008754 O-antigen ligase activity | EXP | PMID:30047569 | UniProt - GO:0008754 O-antigen ligase activity | IMP | PMID:15838026 | PseudoCAP - GO:0016757 glycosyltransferase activity | IDA | PMID:17697256 | PseudoCAP - node: PTN008076295 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 64 leaf_taxa: 31 pseudocap_only_support: false supporting_annotations: - GO:0005886 plasma membrane | EXP | PMID:20824106 | UniProt - GO:0005886 plasma membrane | EXP | PMID:30047569 | UniProt - GO:0005886 plasma membrane | IDA | PMID:17697256 | PseudoCAP - GO:0098567 periplasmic side of plasma membrane | IDA | PMID:20824106 | PseudoCAP - node: PTN008076295 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 64 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0009243 O antigen biosynthetic process | IMP | PMID:15838026 | PseudoCAP rank: 16 - uniprot: Q9HXC2 symbol: PA3891 locus: PA3891 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 54 leaf_ibas_total: 54 review_folder: null seedings: - node: PTN001953445 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 31 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0043190 ATP-binding cassette (ABC) transporter complex | IDA | PMID:17660277 | PseudoCAP - node: PTN001953060 node_term: id: GO:0031459 label: ABC-type glycine betaine transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0031459 ABC-type glycine betaine transporter activity | IDA | PMID:17660277 | PseudoCAP rank: 17 - uniprot: Q9HTB9 symbol: wbpY locus: PA5448 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 51 leaf_ibas_total: 111 review_folder: null seedings: - node: PTN005302544 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 60 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IMP | PMID:9680202 | PseudoCAP - node: PTN000749272 node_term: id: GO:0009103 label: lipopolysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 51 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0009103 lipopolysaccharide biosynthetic process | IMP | PMID:9680202 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IDA | PMID:9680202 | PseudoCAP rank: 18 - uniprot: Q9I5N4 symbol: PA0692 locus: PA0692 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 50 leaf_ibas_total: 50 review_folder: null seedings: - node: PTN002160772 node_term: id: GO:0046819 label: protein secretion by the type V secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0046819 protein secretion by the type V secretion system | IMP | PMID:25009238 | PseudoCAP - node: PTN002160772 node_term: id: GO:0098046 label: type V protein secretion system complex ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0098046 type V protein secretion system complex | IMP | PMID:25009238 | PseudoCAP rank: 19 - uniprot: Q9I544 symbol: mgtE locus: PA0913 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 50 leaf_ibas_total: 50 review_folder: null seedings: - node: PTN000227060 node_term: id: GO:0015693 label: magnesium ion transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015693 magnesium ion transport | IMP | PMID:24722909 | PseudoCAP - node: PTN000227060 node_term: id: GO:0000287 label: magnesium ion binding ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0000287 magnesium ion binding | IMP | PMID:24722909 | PseudoCAP rank: 20 - uniprot: Q9I4R9 symbol: PA1055 locus: PA1055 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 48 leaf_ibas_total: 48 review_folder: null seedings: - node: PTN002160376 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 24 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP - node: PTN002160376 node_term: id: GO:0035725 label: sodium ion transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 24 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0035725 sodium ion transmembrane transport | IMP | PMID:16030218 | PseudoCAP rank: 21 - uniprot: G3XD28 symbol: pilM locus: PA5044 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 46 leaf_ibas_total: 46 review_folder: null seedings: - node: PTN001286216 node_term: id: GO:0044096 label: type IV pilus ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0044096 type IV pilus | IMP | PMID:7565110 | PseudoCAP - node: PTN001286216 node_term: id: GO:0043107 label: type IV pilus-dependent motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0043107 type IV pilus-dependent motility | IMP | PMID:19857645 | PseudoCAP - GO:0043107 type IV pilus-dependent motility | IMP | PMID:7565110 | PseudoCAP rank: 22 - uniprot: Q9HXN5 symbol: PA3760 locus: PA3760 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 43 leaf_ibas_total: 43 review_folder: null seedings: - node: PTN000532509 node_term: id: GO:0015764 label: N-acetylglucosamine transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 43 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0015764 N-acetylglucosamine transport | IMP | PMID:18833300 | PseudoCAP rank: 23 - uniprot: Q9HU85 symbol: hutH locus: PA5098 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 42 leaf_ibas_total: 311 review_folder: null seedings: - node: PTN000796617 node_term: id: GO:0016841 label: ammonia-lyase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 269 leaf_taxa: 42 pseudocap_only_support: true supporting_annotations: - GO:0004397 histidine ammonia-lyase activity | IMP | PMID:4290562 | PseudoCAP - node: PTN000796665 node_term: id: GO:0004397 label: histidine ammonia-lyase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 21 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0004397 histidine ammonia-lyase activity | IMP | PMID:4290562 | PseudoCAP - node: PTN000796665 node_term: id: GO:0006548 label: L-histidine catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 21 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0006548 L-histidine catabolic process | IMP | PMID:4290562 | PseudoCAP rank: 24 - uniprot: P29365 symbol: hom locus: PA3736 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 41 leaf_ibas_total: 82 review_folder: null seedings: - node: PTN000752178 node_term: id: GO:0009088 label: L-threonine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 41 leaf_taxa: 35 pseudocap_only_support: true supporting_annotations: - GO:0009088 L-threonine biosynthetic process | IDA | PMID:10220164 | PseudoCAP - node: PTN000752178 node_term: id: GO:0004412 label: homoserine dehydrogenase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 41 leaf_taxa: 35 pseudocap_only_support: true supporting_annotations: - GO:0004412 homoserine dehydrogenase activity | IDA | PMID:10220164 | PseudoCAP rank: 25 - uniprot: Q9I4R7 symbol: PA1057 locus: PA1057 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 40 leaf_ibas_total: 40 review_folder: null seedings: - node: PTN002160407 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 20 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP - node: PTN002160407 node_term: id: GO:0035725 label: sodium ion transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 20 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0035725 sodium ion transmembrane transport | IMP | PMID:16030218 | PseudoCAP rank: 26 - uniprot: Q9HTI7 symbol: PA5377 locus: PA5377 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 39 leaf_ibas_total: 78 review_folder: null seedings: - node: PTN000766131 node_term: id: GO:0005275 label: amine transmembrane transporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0005275 amine transmembrane transporter activity | IDA | PMID:19919675 | PseudoCAP - node: PTN000766131 node_term: id: GO:0031460 label: glycine betaine transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0031460 glycine betaine transport | IDA | PMID:19919675 | PseudoCAP - GO:0031460 glycine betaine transport | IDA | PMID:21478341 | PseudoCAP - node: PTN000766131 node_term: id: GO:1902603 label: carnitine transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:1902603 carnitine transmembrane transport | IDA | PMID:21478341 | PseudoCAP - node: PTN000766131 node_term: id: GO:0015871 label: choline transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0015871 choline transport | IMP | PMID:19919675 | PseudoCAP - node: PTN000766131 node_term: id: GO:0015226 label: carnitine transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0015226 carnitine transmembrane transporter activity | IDA | PMID:19919675 | PseudoCAP - node: PTN000766131 node_term: id: GO:0043190 label: ATP-binding cassette (ABC) transporter complex ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0043190 ATP-binding cassette (ABC) transporter complex | IDA | PMID:19919675 | PseudoCAP rank: 27 - uniprot: Q9HT76 symbol: nrdJa locus: PA5497 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 39 leaf_ibas_total: 39 review_folder: null seedings: - node: PTN000171476 node_term: id: GO:0004748 label: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 39 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IDA | PMID:15722359 | PseudoCAP rank: 28 - uniprot: Q9HZR3 symbol: cif locus: PA2934 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 38 leaf_ibas_total: 829 review_folder: null seedings: - node: PTN000863140 node_term: id: GO:0016787 label: hydrolase activity ibd_qualifier: null n_seeds: 13 sole_seed: false leaf_ibas: 791 leaf_taxa: 88 pseudocap_only_support: true supporting_annotations: - GO:0004301 epoxide hydrolase activity | IDA | PMID:20118260 | PseudoCAP - node: PTN002458043 node_term: id: GO:0004301 label: epoxide hydrolase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 38 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0004301 epoxide hydrolase activity | IDA | PMID:20118260 | PseudoCAP rank: 29 - uniprot: P21627 symbol: braD locus: PA1073 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 36 leaf_ibas_total: 104 review_folder: null seedings: - node: PTN000209860 node_term: id: GO:0055085 label: transmembrane transport ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 50 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP - GO:1903806 L-isoleucine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP - node: PTN000765102 node_term: id: GO:1903806 label: L-isoleucine import across plasma membrane ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:1903806 L-isoleucine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP - node: PTN000765102 node_term: id: GO:0015808 label: L-alanine transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0015808 L-alanine transport | IMP | PMID:18833300 | PseudoCAP - node: PTN000765102 node_term: id: GO:0042941 label: D-alanine transmembrane transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP rank: 30 - uniprot: P14165 symbol: gltA locus: PA1580 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 36 leaf_ibas_total: 36 review_folder: null seedings: - node: PTN002450857 node_term: id: GO:0036440 label: citrate synthase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: false supporting_annotations: - GO:0036440 citrate synthase activity | EXP | PMID:2507528 | UniProt - GO:0036440 citrate synthase activity | IDA | PMID:7626013 | PseudoCAP - node: PTN002450857 node_term: id: GO:0006099 label: tricarboxylic acid cycle ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0006099 tricarboxylic acid cycle | IDA | PMID:7626013 | PseudoCAP rank: 31 - uniprot: O30508 symbol: aruC locus: PA0895 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 35 leaf_ibas_total: 103 review_folder: null seedings: - node: PTN000241318 node_term: id: GO:0006526 label: L-arginine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 35 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0006526 L-arginine biosynthetic process | IDA | PMID:16593724 | PseudoCAP - node: PTN000241318 node_term: id: GO:0003992 label: N2-acetyl-L-ornithine:2-oxoglutarate 5-transaminase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 35 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-transaminase activity | IDA | PMID:16593724 | PseudoCAP - node: PTN000241033 node_term: id: GO:0006525 label: arginine metabolic process ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 33 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0006526 L-arginine biosynthetic process | IDA | PMID:16593724 | PseudoCAP - GO:0006527 L-arginine catabolic process | IDA | PMID:16593724 | PseudoCAP rank: 32 - uniprot: Q9I3S3 symbol: gbuA locus: PA1421 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 34 leaf_ibas_total: 68 review_folder: null seedings: - node: PTN004253691 node_term: id: GO:0047971 label: guanidinobutyrase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 34 leaf_taxa: 24 pseudocap_only_support: false supporting_annotations: - GO:0047971 guanidinobutyrase activity | EXP | PMID:12029055 | UniProt - GO:0047971 guanidinobutyrase activity | EXP | PMID:21600989 | UniProt - GO:0047971 guanidinobutyrase activity | IDA | PMID:3141581 | PseudoCAP - node: PTN004253691 node_term: id: GO:0006527 label: L-arginine catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 34 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0006527 L-arginine catabolic process | IDA | PMID:3141581 | PseudoCAP rank: 33 - uniprot: P22610 symbol: pilD locus: PA4528 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 33 leaf_ibas_total: 66 review_folder: null seedings: - node: PTN000766410 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 33 leaf_taxa: 29 pseudocap_only_support: false supporting_annotations: - GO:0005886 plasma membrane | EXP | PMID:8331069 | UniProt - GO:0005886 plasma membrane | IDA | PMID:9466269 | PseudoCAP - node: PTN000766410 node_term: id: GO:0004190 label: aspartic-type endopeptidase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 33 leaf_taxa: 29 pseudocap_only_support: false supporting_annotations: - GO:0004190 aspartic-type endopeptidase activity | EXP | PMID:8096341 | UniProt - GO:0004190 aspartic-type endopeptidase activity | IDA | PMID:23255525 | PseudoCAP rank: 34 - uniprot: Q9HTG5 symbol: dgcB locus: PA5399 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 33 leaf_ibas_total: 33 review_folder: null seedings: - node: PTN000229983 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 33 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0047865 dimethylglycine dehydrogenase activity | IDA | PMID:17951379 | PseudoCAP - GO:0047866 dimethylglycine oxidase activity | IDA | PMID:17951379 | PseudoCAP rank: 35 - uniprot: Q9I4X1 symbol: pqsC locus: PA0998 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 30 leaf_ibas_total: 30 review_folder: genes/PSEAE/pqsC seedings: - node: PTN002147059 node_term: id: GO:0044550 label: secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 30 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0044550 secondary metabolite biosynthetic process | IMP | PMID:12426334 | PseudoCAP rank: 36 - uniprot: Q9I537 symbol: PA0920 locus: PA0920 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 28 leaf_ibas_total: 28 review_folder: null seedings: - node: PTN002162750 node_term: id: GO:0055091 label: phospholipid homeostasis ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 14 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0055091 phospholipid homeostasis | IDA | PMID:26261323 | PseudoCAP - node: PTN002162750 node_term: id: GO:0016755 label: aminoacyltransferase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0047637 phosphatidylglycerol alanyltransferase activity | IDA | PMID:26261323 | PseudoCAP - node: PTN005059806 node_term: id: GO:0047637 label: phosphatidylglycerol alanyltransferase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 2 leaf_taxa: 2 pseudocap_only_support: true supporting_annotations: - GO:0047637 phosphatidylglycerol alanyltransferase activity | IDA | PMID:26261323 | PseudoCAP rank: 37 - uniprot: Q9HWU9 symbol: PA4079 locus: PA4079 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 27 leaf_ibas_total: 27 review_folder: null seedings: - node: PTN002388087 node_term: id: GO:0016616 label: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 27 leaf_taxa: 14 pseudocap_only_support: true supporting_annotations: - GO:0004090 carbonyl reductase (NADPH) activity | IDA | PMID:28524228 | PseudoCAP rank: 38 - uniprot: G3XCX3 symbol: pilU locus: PA0396 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 26 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN000766390 node_term: id: GO:0043107 label: type IV pilus-dependent motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0043107 type IV pilus-dependent motility | IMP | PMID:7854122 | PseudoCAP - node: PTN000766390 node_term: id: GO:0016888 label: DNA endonuclease activity, producing 5'-phosphomonoesters ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0016888 DNA endonuclease activity, producing 5'-phosphomonoesters | IDA | PMID:18174131 | PseudoCAP rank: 39 - uniprot: Q9I298 symbol: liuC locus: PA2013 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 26 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN001733227 node_term: id: GO:0046247 label: terpene catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0046247 terpene catabolic process | IMP | PMID:16820476 | PseudoCAP - node: PTN001733227 node_term: id: GO:0004490 label: methylglutaconyl-CoA hydratase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0004490 methylglutaconyl-CoA hydratase activity | IMP | PMID:16517656 | PseudoCAP rank: 40 - uniprot: Q9HVR8 symbol: PA4503 locus: PA4503 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 54 review_folder: null seedings: - node: PTN002455499 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 29 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP - node: PTN000765601 node_term: id: GO:0071916 label: dipeptide transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP rank: 41 - uniprot: Q9HU66 symbol: thiI locus: PA5118 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN001804941 node_term: id: GO:0052837 label: thiazole biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0052837 thiazole biosynthetic process | IDA | PMID:9209060 | PseudoCAP rank: 42 - uniprot: Q9I319 symbol: pscC locus: PA1716 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN009110345 node_term: id: GO:0030254 label: protein secretion by the type III secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0030254 protein secretion by the type III secretion system | IMP | PMID:8971719 | PseudoCAP - node: PTN001251149 node_term: id: GO:0009306 label: protein secretion ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 0 leaf_taxa: 0 pseudocap_only_support: true supporting_annotations: - GO:0030254 protein secretion by the type III secretion system | IMP | PMID:8971719 | PseudoCAP rank: 43 - uniprot: Q9HZR6 symbol: cifR locus: PA2931 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN002934616 node_term: id: GO:0045892 label: negative regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 9 pseudocap_only_support: false supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | EXP | PMID:22843844 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IEP | PMID:22843844 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:18458065 | PseudoCAP rank: 44 - uniprot: Q9HVG7 symbol: PA4624 locus: PA4624 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN002160772 node_term: id: GO:0008320 label: transmembrane protein transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0008320 transmembrane protein transporter activity | IMP | PMID:20088866 | PseudoCAP rank: 45 - uniprot: Q00513 symbol: xcpS locus: PA3102 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 25 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN000768597 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 25 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 46 - uniprot: Q00517 symbol: xcpW locus: PA3098 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 24 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002446812 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP - node: PTN002446812 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:8331069 | PseudoCAP rank: 47 - uniprot: Q9HTB8 symbol: wzm locus: PA5451 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 24 leaf_ibas_total: 24 review_folder: genes/PSEAE/Q9HTB8 seedings: - node: PTN002019107 node_term: id: GO:0015920 label: lipopolysaccharide transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 24 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0015920 lipopolysaccharide transport | IMP | PMID:9244257 | PseudoCAP rank: 48 - uniprot: Q9HU17 symbol: dctQ locus: PA5168 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 24 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002169725 node_term: id: GO:0015740 label: C4-dicarboxylate transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 24 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0015740 C4-dicarboxylate transport | IMP | PMID:21725012 | PseudoCAP rank: 49 - uniprot: Q9X6P4 symbol: lpxA locus: PA3644 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 24 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN000602377 node_term: id: GO:0009103 label: lipopolysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 24 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0009103 lipopolysaccharide biosynthetic process | IDA | PMID:1904818 | PseudoCAP rank: 50 - uniprot: Q00516 symbol: xcpV locus: PA3099 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 24 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002446181 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:8331069 | PseudoCAP - node: PTN002446181 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 51 - uniprot: P35818 symbol: xcpQ locus: PA3105 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 23 leaf_ibas_total: 46 review_folder: null seedings: - node: PTN000768388 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 23 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:9466268 | PseudoCAP - node: PTN000768388 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP - node: PTN001251149 node_term: id: GO:0009306 label: protein secretion ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 0 leaf_taxa: 0 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 52 - uniprot: Q9I524 symbol: relA locus: PA0934 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 23 leaf_ibas_total: 23 review_folder: null seedings: - node: PTN001083175 node_term: id: GO:0042594 label: response to starvation ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015968 stringent response | IMP | PMID:15385461 | PseudoCAP rank: 53 - uniprot: P13981 symbol: arcA locus: PA5171 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 23 leaf_ibas_total: 23 review_folder: null seedings: - node: PTN005338738 node_term: id: GO:0016990 label: arginine deiminase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0016990 arginine deiminase activity | IMP | PMID:6438064 | PseudoCAP rank: 54 - uniprot: Q9HWH9 symbol: nmoA locus: PA4202 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 23 leaf_ibas_total: 23 review_folder: null seedings: - node: PTN001284536 node_term: id: GO:0018580 label: nitronate monooxygenase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 23 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0018580 nitronate monooxygenase activity | IDA | PMID:25002579 | PseudoCAP rank: 55 - uniprot: G3XD30 symbol: pilN locus: PA5043 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 21 leaf_ibas_total: 21 review_folder: null seedings: - node: PTN002220336 node_term: id: GO:0044096 label: type IV pilus ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0044096 type IV pilus | IMP | PMID:7565110 | PseudoCAP - node: PTN002220336 node_term: id: GO:0043107 label: type IV pilus-dependent motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0043107 type IV pilus-dependent motility | IMP | PMID:19857645 | PseudoCAP - GO:0043107 type IV pilus-dependent motility | IMP | PMID:7565110 | PseudoCAP - node: PTN002220336 node_term: id: GO:0043683 label: type IV pilus assembly ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0043683 type IV pilus assembly | IMP | PMID:19857645 | PseudoCAP - GO:0043683 type IV pilus assembly | IMP | PMID:7565110 | PseudoCAP rank: 56 - uniprot: P14756 symbol: lasB locus: PA3724 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 21 leaf_ibas_total: 21 review_folder: null seedings: - node: PTN002138658 node_term: id: GO:0006508 label: proteolysis ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 21 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0006508 proteolysis | IDA | PMID:1597429 | PseudoCAP rank: 57 - uniprot: P29364 symbol: thrB locus: PA5495 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 20 leaf_ibas_total: 73 review_folder: null seedings: - node: PTN001464650 node_term: id: GO:0019202 label: amino acid kinase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 53 leaf_taxa: 34 pseudocap_only_support: true supporting_annotations: - GO:0004413 homoserine kinase activity | IDA | PMID:10220164 | PseudoCAP - node: PTN001464661 node_term: id: GO:0009088 label: L-threonine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0009088 L-threonine biosynthetic process | IDA | PMID:10220164 | PseudoCAP - node: PTN001464661 node_term: id: GO:0004413 label: homoserine kinase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0004413 homoserine kinase activity | IDA | PMID:10220164 | PseudoCAP rank: 58 - uniprot: Q9HUM0 symbol: hfq locus: PA4944 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 20 leaf_ibas_total: 40 review_folder: null seedings: - node: PTN002164223 node_term: id: GO:0045974 label: regulation of translation, ncRNA-mediated ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 20 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0045974 regulation of translation, ncRNA-mediated | IDA | PMID:24945892 | PseudoCAP - node: PTN002164223 node_term: id: GO:0043487 label: regulation of RNA stability ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 20 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0043487 regulation of RNA stability | IMP | PMID:16468994 | PseudoCAP rank: 59 - uniprot: P04739 symbol: pilA locus: PA4525 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 20 leaf_ibas_total: 20 review_folder: null seedings: - node: PTN002013003 node_term: id: GO:0043107 label: type IV pilus-dependent motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0043107 type IV pilus-dependent motility | IDA | PMID:12933890 | PseudoCAP - GO:0043107 type IV pilus-dependent motility | IMP | PMID:9224878 | PseudoCAP - node: PTN002013003 node_term: id: GO:0044096 label: type IV pilus ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0044096 type IV pilus | IDA | PMID:2985436 | PseudoCAP rank: 60 - uniprot: Q9K3C5 symbol: fliD locus: PA1094 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 20 leaf_ibas_total: 20 review_folder: null seedings: - node: PTN000767631 node_term: id: GO:0009421 label: bacterial-type flagellum filament cap ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 20 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0009421 bacterial-type flagellum filament cap | IDA | PMID:9488388 | PseudoCAP rank: 61 - uniprot: Q9I4R5 symbol: PA1059 locus: PA1059 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 19 leaf_ibas_total: 19 review_folder: null seedings: - node: PTN002162936 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 19 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP rank: 62 - uniprot: Q9I4R6 symbol: PA1058 locus: PA1058 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 19 leaf_ibas_total: 19 review_folder: null seedings: - node: PTN002162906 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 19 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP rank: 63 - uniprot: Q9HZX3 symbol: tgpA locus: PA2873 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 17 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN002126683 node_term: id: GO:0003810 label: protein-glutamine gamma-glutamyltransferase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 17 leaf_taxa: 15 pseudocap_only_support: false supporting_annotations: - GO:0003810 protein-glutamine gamma-glutamyltransferase activity | IDA | PMID:23209712 | PseudoCAP - GO:0003810 protein-glutamine gamma-glutamyltransferase activity | IDA | PMID:23209712 | UniProt rank: 64 - uniprot: G3XD14 symbol: dksA locus: PA4723 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 17 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN002139169 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 17 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:15853892 | PseudoCAP rank: 65 - uniprot: Q51507 symbol: pchB locus: PA4230 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 17 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN002211012 node_term: id: GO:0009697 label: salicylic acid biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 17 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0009697 salicylic acid biosynthetic process | IDA | PMID:7500944 | PseudoCAP rank: 66 - uniprot: P18275 symbol: arcD locus: PA5170 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 16 leaf_ibas_total: 86 review_folder: null seedings: - node: PTN008675589 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 70 leaf_taxa: 24 pseudocap_only_support: false supporting_annotations: - GO:0043858 arginine:ornithine antiporter activity | EXP | PMID:2158926 | UniProt - GO:0043858 arginine:ornithine antiporter activity | EXP | PMID:8449902 | UniProt - GO:0043858 arginine:ornithine antiporter activity | IMP | PMID:1311296 | PseudoCAP - node: PTN000208945 node_term: id: GO:0043858 label: arginine:ornithine antiporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 16 leaf_taxa: 11 pseudocap_only_support: false supporting_annotations: - GO:0043858 arginine:ornithine antiporter activity | EXP | PMID:2158926 | UniProt - GO:0043858 arginine:ornithine antiporter activity | EXP | PMID:8449902 | UniProt - GO:0043858 arginine:ornithine antiporter activity | IMP | PMID:1311296 | PseudoCAP rank: 67 - uniprot: Q9I4S0 symbol: PA1054 locus: PA1054 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 16 leaf_ibas_total: 32 review_folder: null seedings: - node: PTN000511949 node_term: id: GO:0035725 label: sodium ion transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 16 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0035725 sodium ion transmembrane transport | IMP | PMID:16030218 | PseudoCAP - node: PTN000511949 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 16 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP rank: 68 - uniprot: Q9I4R8 symbol: PA1056 locus: PA1056 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 16 leaf_ibas_total: 32 review_folder: null seedings: - node: PTN001865541 node_term: id: GO:0015385 label: sodium:proton antiporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 16 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015385 sodium:proton antiporter activity | IMP | PMID:16030218 | PseudoCAP - node: PTN001865541 node_term: id: GO:0035725 label: sodium ion transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 16 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0035725 sodium ion transmembrane transport | IMP | PMID:16030218 | PseudoCAP rank: 69 - uniprot: Q9HU77 symbol: hutF locus: PA5106 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 16 leaf_ibas_total: 16 review_folder: null seedings: - node: PTN000138516 node_term: id: GO:0006548 label: L-histidine catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0006548 L-histidine catabolic process | IMP | PMID:4290562 | PseudoCAP - node: PTN000138516 node_term: id: GO:0050416 label: formimidoylglutamate deiminase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: false supporting_annotations: - GO:0050416 formimidoylglutamate deiminase activity | EXP | PMID:17128965 | UniProt - GO:0050416 formimidoylglutamate deiminase activity | IDA | PMID:16475788 | PseudoCAP rank: 70 - uniprot: G3XD10 symbol: nirJ locus: PA0511 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 15 leaf_ibas_total: 15 review_folder: null seedings: - node: PTN000132400 node_term: id: GO:0006783 label: heme biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 15 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0006783 heme biosynthetic process | IMP | PMID:8982003 | PseudoCAP rank: 71 - uniprot: Q00512 symbol: xcpR locus: PA3103 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 14 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN002016240 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP - node: PTN002016240 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:16168578 | PseudoCAP rank: 72 - uniprot: Q9HWW1 symbol: oprG locus: PA4067 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 13 leaf_ibas_total: 13 review_folder: null seedings: - node: PTN005107949 node_term: id: GO:0055085 label: transmembrane transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0055085 transmembrane transport | IDA | PMID:19486157 | PseudoCAP rank: 73 - uniprot: Q9HYK7 symbol: fpr locus: PA3397 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 13 leaf_ibas_total: 13 review_folder: null seedings: - node: PTN002500048 node_term: id: GO:0042167 label: heme catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 13 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0042167 heme catabolic process | IDA | PMID:17915950 | PseudoCAP rank: 74 - uniprot: Q9HVR7 symbol: PA4504 locus: PA4504 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 12 leaf_ibas_total: 108 review_folder: null seedings: - node: PTN000765620 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 96 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP - node: PTN000766696 node_term: id: GO:0071916 label: dipeptide transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP rank: 75 - uniprot: Q03456 symbol: fur locus: PA4764 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 12 leaf_ibas_total: 83 review_folder: null seedings: - node: PTN002112386 node_term: id: GO:1900376 label: regulation of secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 71 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:1900705 negative regulation of siderophore biosynthetic process | IMP | PMID:8885270 | PseudoCAP - node: PTN002112483 node_term: id: GO:1900705 label: negative regulation of siderophore biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:1900705 negative regulation of siderophore biosynthetic process | IMP | PMID:8885270 | PseudoCAP rank: 76 - uniprot: Q9I3M6 symbol: PA1486 locus: PA1486 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 12 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN002194605 node_term: id: GO:0004177 label: aminopeptidase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 12 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0004177 aminopeptidase activity | IDA | PMID:23728237 | PseudoCAP rank: 77 - uniprot: Q9I168 symbol: pvdH locus: PA2413 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 11 leaf_ibas_total: 11 review_folder: genes/PSEAE/pvdH seedings: - node: PTN002461253 node_term: id: GO:0008483 label: transaminase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 11 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0008483 transaminase activity | IDA | PMID:15317763 | PseudoCAP rank: 78 - uniprot: Q9HU98 symbol: PA5085 locus: PA5085 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 11 leaf_ibas_total: 11 review_folder: null seedings: - node: PTN001576694 node_term: id: GO:0043565 label: sequence-specific DNA binding ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 11 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0043565 sequence-specific DNA binding | IDA | PMID:25082951 | PseudoCAP rank: 79 - uniprot: G3XCU6 symbol: cysB locus: PA1754 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 10 leaf_ibas_total: 212 review_folder: null seedings: - node: PTN001248394 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 202 leaf_taxa: 30 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IDA | PMID:20370820 | PseudoCAP - node: PTN002824317 node_term: id: GO:0019344 label: L-cysteine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0019344 L-cysteine biosynthetic process | IMP | PMID:9218775 | PseudoCAP rank: 80 - uniprot: Q51485 symbol: oprB locus: PA3186 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 10 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN002209977 node_term: id: GO:0008643 label: carbohydrate transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0008643 carbohydrate transport | IDA | PMID:7768797 | PseudoCAP rank: 81 - uniprot: Q9I551 symbol: PA0906 locus: PA0906 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 10 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN002221379 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:26100878 | PseudoCAP rank: 82 - uniprot: Q9I1J5 symbol: PA2280 locus: PA2280 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 10 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN008682975 node_term: id: GO:0016655 label: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 10 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IDA | PMID:22304305 | PseudoCAP rank: 83 - uniprot: Q9I0Q6 symbol: PA2580 locus: PA2580 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 9 leaf_ibas_total: 18 review_folder: null seedings: - node: PTN002922793 node_term: id: GO:0034599 label: cellular response to oxidative stress ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 9 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0034599 cellular response to oxidative stress | IMP | PMID:25085734 | PseudoCAP - node: PTN002922793 node_term: id: GO:0003955 label: NAD(P)H dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 9 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0003955 NAD(P)H dehydrogenase (quinone) activity | IMP | PMID:25085734 | PseudoCAP rank: 84 - uniprot: Q9I4X3 symbol: pqsA locus: PA0996 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 9 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN002458530 node_term: id: GO:0044550 label: secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 9 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0044550 secondary metabolite biosynthetic process | IMP | PMID:12426334 | PseudoCAP rank: 85 - uniprot: Q9I489 symbol: lhpL locus: PA1255 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 9 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN002433936 node_term: id: GO:0047580 label: 4-hydroxyproline epimerase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 9 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0047580 4-hydroxyproline epimerase activity | IMP | PMID:27145750 | PseudoCAP rank: 86 - uniprot: Q9HUL2 symbol: motB locus: PA4953 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 9 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN001251133 node_term: id: GO:0071978 label: bacterial-type flagellum-dependent swarming motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 9 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:15629949 | PseudoCAP - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:25349157 | PseudoCAP rank: 87 - uniprot: Q9HU18 symbol: dctP locus: PA5167 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 9 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN002121312 node_term: id: GO:0015740 label: C4-dicarboxylate transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 9 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0015740 C4-dicarboxylate transport | IMP | PMID:21725012 | PseudoCAP rank: 88 - uniprot: P24559 symbol: pilT locus: PA0395 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 8 leaf_ibas_total: 8 review_folder: null seedings: - node: PTN002020799 node_term: id: GO:0016887 label: ATP hydrolysis activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0016887 ATP hydrolysis activity | IDA | PMID:18174131 | PseudoCAP rank: 89 - uniprot: G3XDA6 symbol: ptrB locus: PA0612 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 8 leaf_ibas_total: 8 review_folder: null seedings: - node: PTN002215317 node_term: id: GO:1900378 label: positive regulation of secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 8 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:1900378 positive regulation of secondary metabolite biosynthetic process | IMP | PMID:16109947 | PseudoCAP rank: 90 - uniprot: Q9I403 symbol: PA1341 locus: PA1341 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 91 review_folder: null seedings: - node: PTN000770157 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 84 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0051938 L-glutamate import | IMP | PMID:18833300 | PseudoCAP - node: PTN004745596 node_term: id: GO:0051938 label: L-glutamate import ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0051938 L-glutamate import | IMP | PMID:18833300 | PseudoCAP rank: 91 - uniprot: Q9HT73 symbol: znuC locus: PA5500 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN001952271 node_term: id: GO:0010043 label: response to zinc ion ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0010043 response to zinc ion | IMP | PMID:24086521 | PseudoCAP rank: 92 - uniprot: Q9I1N6 symbol: pslC locus: PA2233 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002463206 node_term: id: GO:0044010 label: single-species biofilm formation ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0044010 single-species biofilm formation | IDA | PMID:19659934 | PseudoCAP rank: 93 - uniprot: G3XD69 symbol: PA4521 locus: PA4521 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002214697 node_term: id: GO:0046677 label: response to antibiotic ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0046677 response to antibiotic | IMP | PMID:9835532 | PseudoCAP rank: 94 - uniprot: G3XCZ0 symbol: fimU locus: PA4550 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN008624060 node_term: id: GO:0044096 label: type IV pilus ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0044096 type IV pilus | IDA | PMID:20338182 | PseudoCAP rank: 95 - uniprot: P09786 symbol: phnB locus: PA1002 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN000230115 node_term: id: GO:0002047 label: phenazine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0002047 phenazine biosynthetic process | IMP | PMID:2153661 | PseudoCAP rank: 96 - uniprot: Q9HTJ9 symbol: PA5359 locus: PA5359 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002217427 node_term: id: GO:0043448 label: alkane catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0043448 alkane catabolic process | IMP | PMID:14574114 | PseudoCAP rank: 97 - uniprot: P38108 symbol: mucB locus: PA0764 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 7 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002215378 node_term: id: GO:0032885 label: regulation of polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0032885 regulation of polysaccharide biosynthetic process | IMP | PMID:9171421 | PseudoCAP rank: 98 - uniprot: Q05098 symbol: pfeA locus: PA2688 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 6 leaf_ibas_total: 148 review_folder: null seedings: - node: PTN004738955 node_term: id: GO:0015344 label: siderophore uptake transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 142 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015344 siderophore uptake transmembrane transporter activity | IMP | PMID:8419284 | PseudoCAP - node: PTN000763909 node_term: id: GO:0042930 label: enterobactin transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 3 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0042930 enterobactin transport | IMP | PMID:8419284 | PseudoCAP - node: PTN000763909 node_term: id: GO:0042931 label: enterobactin transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 3 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0042931 enterobactin transmembrane transporter activity | IMP | PMID:8419284 | PseudoCAP rank: 99 - uniprot: Q9I404 symbol: PA1340 locus: PA1340 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 6 leaf_ibas_total: 90 review_folder: null seedings: - node: PTN000770157 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 84 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0006868 L-glutamine transport | IMP | PMID:18310026 | PseudoCAP - GO:0042940 D-amino acid transport | IMP | PMID:25082951 | PseudoCAP - GO:0051938 L-glutamate import | IMP | PMID:18833300 | PseudoCAP - GO:1903803 L-glutamine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP - node: PTN000764525 node_term: id: GO:0006868 label: L-glutamine transport ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 6 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0006868 L-glutamine transport | IMP | PMID:18310026 | PseudoCAP - GO:1903803 L-glutamine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP rank: 100 - uniprot: Q9HVR6 symbol: PA4505 locus: PA4505 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 6 leaf_ibas_total: 86 review_folder: null seedings: - node: PTN000656054 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 80 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP - node: PTN000656114 node_term: id: GO:0071916 label: dipeptide transmembrane transporter activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 6 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP rank: 101 - uniprot: Q9HTY2 symbol: PA5208 locus: PA5208 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 5 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN002194937 node_term: id: GO:0071978 label: bacterial-type flagellum-dependent swarming motility ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 5 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:17158671 | PseudoCAP rank: 102 - uniprot: Q7DC82 symbol: phzC1 locus: PA1901 PA4212 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 5 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN000481936 node_term: id: GO:0002047 label: phenazine biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 5 leaf_taxa: 4 pseudocap_only_support: true supporting_annotations: - GO:0002047 phenazine biosynthetic process | IDA | PMID:11591691 | PseudoCAP rank: 103 - uniprot: P33883 symbol: lasI locus: PA1432 uniprot_reviewed: true tier: 1 leaf_ibas_sole_seeded: 5 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN002217335 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 5 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0007165 signal transduction | IDA | PMID:8493556 | PseudoCAP rank: 104 - uniprot: Q9HXU3 symbol: PA3697 locus: PA3697 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 5 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN002422332 node_term: id: GO:0080164 label: regulation of nitric oxide metabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 5 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0080164 regulation of nitric oxide metabolic process | IMP | PMID:18043907 | PseudoCAP rank: 105 - uniprot: G3XD20 symbol: mucD locus: PA0766 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 5 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN002342204 node_term: id: GO:0042597 label: periplasmic space ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 5 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0042597 periplasmic space | IDA | PMID:21713511 | PseudoCAP rank: 106 - uniprot: Q9HXA4 symbol: eddB locus: PA3909 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 3 leaf_ibas_total: 3 review_folder: null seedings: - node: PTN001684760 node_term: id: GO:0006308 label: DNA catabolic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 3 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0006308 DNA catabolic process | IMP | PMID:20370819 | PseudoCAP rank: 107 - uniprot: Q9HZE4 symbol: pelA locus: PA3064 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 3 leaf_ibas_total: 3 review_folder: null seedings: - node: PTN002441861 node_term: id: GO:0019213 label: deacetylase activity ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 3 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0019213 deacetylase activity | IDA | PMID:23504011 | PseudoCAP rank: 108 - uniprot: Q9I178 symbol: PA2403 locus: PA2403 uniprot_reviewed: false tier: 1 leaf_ibas_sole_seeded: 2 leaf_ibas_total: 2 review_folder: null seedings: - node: PTN009150613 node_term: id: GO:0019290 label: siderophore biosynthetic process ibd_qualifier: null n_seeds: 1 sole_seed: true leaf_ibas: 2 leaf_taxa: 2 pseudocap_only_support: true supporting_annotations: - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:12207696 | PseudoCAP rank: 109 - uniprot: Q9I3Y3 symbol: pmpM locus: PA1361 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 2231 review_folder: null seedings: - node: PTN000129144 node_term: id: GO:0016020 label: membrane ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 2231 leaf_taxa: 102 pseudocap_only_support: true supporting_annotations: - GO:0005886 plasma membrane | IDA | PMID:14679249 | PseudoCAP - GO:0098567 periplasmic side of plasma membrane | IDA | PMID:14679249 | PseudoCAP rank: 110 - uniprot: Q9I757 symbol: pppA locus: PA0075 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 1913 review_folder: null seedings: - node: PTN000352745 node_term: id: GO:0004722 label: protein serine/threonine phosphatase activity ibd_qualifier: null n_seeds: 35 sole_seed: false leaf_ibas: 1913 leaf_taxa: 121 pseudocap_only_support: true supporting_annotations: - GO:0004722 protein serine/threonine phosphatase activity | IDA | PMID:17558395 | PseudoCAP rank: 111 - uniprot: Q9HUP2 symbol: PA4921 locus: PA4921 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 960 review_folder: null seedings: - node: PTN005219546 node_term: id: GO:0052689 label: carboxylic ester hydrolase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 960 leaf_taxa: 51 pseudocap_only_support: true supporting_annotations: - GO:0004104 cholinesterase activity | IDA | PMID:22192836 | PseudoCAP rank: 112 - uniprot: P32265 symbol: nfxB locus: PA4600 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 822 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0000976 label: transcription cis-regulatory region binding ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: false supporting_annotations: - GO:0000976 transcription cis-regulatory region binding | IDA | PMID:23924707 | PseudoCAP - GO:0000976 transcription cis-regulatory region binding | IPI | PMID:7592337 | CollecTF - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: false supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:8878035 | PseudoCAP - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:8878035 | UniProt rank: 113 - uniprot: Q9HXS0 symbol: nalC locus: PA3721 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 822 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0000976 label: transcription cis-regulatory region binding ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0000976 transcription cis-regulatory region binding | IDA | PMID:22393435 | PseudoCAP - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:22393435 | PseudoCAP rank: 114 - uniprot: Q9HU94 symbol: PA5089 locus: PA5089 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 713 review_folder: null seedings: - node: PTN004499769 node_term: id: GO:0004630 label: D-type glycerophospholipase activity ibd_qualifier: null n_seeds: 24 sole_seed: false leaf_ibas: 713 leaf_taxa: 91 pseudocap_only_support: true supporting_annotations: - GO:0004630 D-type glycerophospholipase activity | IMP | PMID:24832454 | PseudoCAP rank: 115 - uniprot: Q9HYC2 symbol: pldA locus: PA3487 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 713 review_folder: null seedings: - node: PTN004499769 node_term: id: GO:0004630 label: D-type glycerophospholipase activity ibd_qualifier: null n_seeds: 24 sole_seed: false leaf_ibas: 713 leaf_taxa: 91 pseudocap_only_support: true supporting_annotations: - GO:0004630 D-type glycerophospholipase activity | IMP | PMID:24832454 | PseudoCAP rank: 116 - uniprot: Q9I5E3 symbol: prpC locus: PA0795 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 540 review_folder: null seedings: - node: PTN000201223 node_term: id: GO:0036440 label: citrate synthase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 270 leaf_taxa: 123 pseudocap_only_support: true supporting_annotations: - GO:0036440 citrate synthase activity | IDA | PMID:7626013 | PseudoCAP - node: PTN000201223 node_term: id: GO:0006099 label: tricarboxylic acid cycle ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 270 leaf_taxa: 123 pseudocap_only_support: true supporting_annotations: - GO:0006099 tricarboxylic acid cycle | IDA | PMID:7626013 | PseudoCAP rank: 117 - uniprot: G3XCV1 symbol: pvdS locus: PA2426 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 500 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: false supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IMP | PMID:7751284 | PseudoCAP - GO:0045893 positive regulation of DNA-templated transcription | IDA | PMID:11222621 | CollecTF - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IDA | PMID:10692351 | PseudoCAP - GO:0016987 sigma factor activity | IDA | PMID:10873648 | PseudoCAP rank: 118 - uniprot: Q9I034 symbol: copR locus: PA2809 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 475 review_folder: null seedings: - node: PTN000724188 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 33 sole_seed: false leaf_ibas: 475 leaf_taxa: 45 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:17449606 | PseudoCAP rank: 119 - uniprot: Q9I2U3 symbol: parR locus: PA1799 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 475 review_folder: null seedings: - node: PTN000724188 node_term: id: GO:0000156 label: phosphorelay response regulator activity ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 475 leaf_taxa: 45 pseudocap_only_support: true supporting_annotations: - GO:0000156 phosphorelay response regulator activity | IMP | PMID:20547815 | PseudoCAP rank: 120 - uniprot: Q9HYQ0 symbol: PA3345 locus: PA3345 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 462 review_folder: null seedings: - node: PTN002000688 node_term: id: GO:0009927 label: histidine phosphotransfer kinase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 462 leaf_taxa: 57 pseudocap_only_support: true supporting_annotations: - GO:0009927 histidine phosphotransfer kinase activity | IDA | PMID:16182517 | PseudoCAP rank: 121 - uniprot: Q9I3B2 symbol: fabB locus: PA1609 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 436 review_folder: null seedings: - node: PTN000918584 node_term: id: GO:0006633 label: fatty acid biosynthetic process ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 436 leaf_taxa: 128 pseudocap_only_support: true supporting_annotations: - GO:0006636 unsaturated fatty acid biosynthetic process | IMP | PMID:9286984 | PseudoCAP rank: 122 - uniprot: G3XCV0 symbol: fleQ locus: PA1097 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 428 review_folder: null seedings: - node: PTN000787214 node_term: id: GO:0000987 label: cis-regulatory region sequence-specific DNA binding ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 214 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0000987 cis-regulatory region sequence-specific DNA binding | IDA | PMID:18485075 | PseudoCAP - node: PTN000787214 node_term: id: GO:0001216 label: DNA-binding transcription activator activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 214 leaf_taxa: 28 pseudocap_only_support: false supporting_annotations: - GO:0001216 DNA-binding transcription activator activity | IMP | PMID:12218010 | CollecTF - GO:0001216 DNA-binding transcription activator activity | IMP | PMID:22581773 | CollecTF - GO:0001216 DNA-binding transcription activator activity | IMP | PMID:22581773 | PseudoCAP - GO:0001216 DNA-binding transcription activator activity | IPI | PMID:12218010 | CollecTF - GO:0001216 DNA-binding transcription activator activity | IPI | PMID:22581773 | CollecTF rank: 123 - uniprot: P45684 symbol: rpoS locus: PA3622 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 419 review_folder: null seedings: - node: PTN000779307 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 419 leaf_taxa: 77 pseudocap_only_support: true supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:10383954 | PseudoCAP rank: 124 - uniprot: Q59636 symbol: ndk locus: PA3807 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 412 review_folder: null seedings: - node: PTN000887110 node_term: id: GO:0004550 label: nucleoside diphosphate kinase activity ibd_qualifier: null n_seeds: 21 sole_seed: false leaf_ibas: 412 leaf_taxa: 137 pseudocap_only_support: true supporting_annotations: - GO:0004550 nucleoside diphosphate kinase activity | IDA | PMID:8809750 | PseudoCAP rank: 125 - uniprot: Q9HWK3 symbol: PA4178 locus: PA4178 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 412 review_folder: null seedings: - node: PTN000010968 node_term: id: GO:0008168 label: methyltransferase activity ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 412 leaf_taxa: 77 pseudocap_only_support: true supporting_annotations: - GO:0008168 methyltransferase activity | IDA | PMID:26677219 | PseudoCAP rank: 126 - uniprot: Q9HVJ0 symbol: PA4596 locus: PA4596 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:25143244 | PseudoCAP rank: 127 - uniprot: Q9HXW2 symbol: PA3678 locus: PA3678 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:12193619 | PseudoCAP rank: 128 - uniprot: Q9HZW2 symbol: atuR locus: PA2885 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:20487029 | PseudoCAP rank: 129 - uniprot: Q9HY46 symbol: nalD locus: PA3574 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:17028276 | PseudoCAP rank: 130 - uniprot: Q9HZJ9 symbol: psrA locus: PA3006 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: false supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | EXP | PMID:18524913 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:15899403 | CollecTF - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:16428760 | PseudoCAP rank: 131 - uniprot: G3XCU9 symbol: mexZ locus: PA2020 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 411 review_folder: null seedings: - node: PTN004738546 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 411 leaf_taxa: 33 pseudocap_only_support: false supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:15336398 | PseudoCAP - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:19589837 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IEP | PMID:19589837 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:15336398 | PseudoCAP - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:23441219 | UniProt - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:31527038 | UniProt rank: 132 - uniprot: Q9HW23 symbol: PA4379 locus: PA4379 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 385 review_folder: null seedings: - node: PTN008676703 node_term: id: GO:0008168 label: methyltransferase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 385 leaf_taxa: 112 pseudocap_only_support: true supporting_annotations: - GO:0008168 methyltransferase activity | IDA | PMID:28263305 | PseudoCAP rank: 133 - uniprot: P53593 symbol: sucC locus: PA1588 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 372 review_folder: null seedings: - node: PTN000212531 node_term: id: GO:0042709 label: succinate-CoA ligase complex ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 208 leaf_taxa: 130 pseudocap_only_support: true supporting_annotations: - GO:0042709 succinate-CoA ligase complex | IDA | PMID:10671455 | PseudoCAP - node: PTN000212531 node_term: id: GO:0004775 label: succinate-CoA ligase (ADP-forming) activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 164 leaf_taxa: 126 pseudocap_only_support: true supporting_annotations: - GO:0004775 succinate-CoA ligase (ADP-forming) activity | IDA | PMID:10671455 | PseudoCAP rank: 134 - uniprot: Q9I2A0 symbol: liuE locus: PA2011 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 366 review_folder: null seedings: - node: PTN000031222 node_term: id: GO:0006552 label: L-leucine catabolic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 183 leaf_taxa: 100 pseudocap_only_support: true supporting_annotations: - GO:0006552 L-leucine catabolic process | IMP | PMID:19459965 | PseudoCAP - node: PTN000031222 node_term: id: GO:0004419 label: hydroxymethylglutaryl-CoA lyase activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 183 leaf_taxa: 100 pseudocap_only_support: false supporting_annotations: - GO:0004419 hydroxymethylglutaryl-CoA lyase activity | EXP | PMID:19597963 | UniProt - GO:0004419 hydroxymethylglutaryl-CoA lyase activity | IMP | PMID:16517656 | PseudoCAP rank: 135 - uniprot: Q9I509 symbol: PA0949 locus: PA0949 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 363 review_folder: null seedings: - node: PTN000777387 node_term: id: GO:0003955 label: NAD(P)H dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 363 leaf_taxa: 76 pseudocap_only_support: true supporting_annotations: - GO:0003955 NAD(P)H dehydrogenase (quinone) activity | IMP | PMID:25085734 | PseudoCAP rank: 136 - uniprot: Q9I758 symbol: ppkA locus: PA0074 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 353 review_folder: null seedings: - node: PTN001981567 node_term: id: GO:0004674 label: protein serine/threonine kinase activity ibd_qualifier: null n_seeds: 17 sole_seed: false leaf_ibas: 353 leaf_taxa: 73 pseudocap_only_support: true supporting_annotations: - GO:0004674 protein serine/threonine kinase activity | IDA | PMID:9852028 | PseudoCAP rank: 137 - uniprot: Q9HUJ8 symbol: parE locus: PA4967 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 350 review_folder: null seedings: - node: PTN000018885 node_term: id: GO:0009330 label: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 117 leaf_taxa: 78 pseudocap_only_support: true supporting_annotations: - GO:0009340 DNA topoisomerase IV complex | IDA | PMID:10049263 | PseudoCAP - node: PTN000018885 node_term: id: GO:0006265 label: DNA topological change ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 117 leaf_taxa: 78 pseudocap_only_support: true supporting_annotations: - GO:0006265 DNA topological change | IDA | PMID:10049263 | PseudoCAP - node: PTN000018885 node_term: id: GO:0003918 label: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 116 leaf_taxa: 77 pseudocap_only_support: true supporting_annotations: - GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IDA | PMID:10049263 | PseudoCAP rank: 138 - uniprot: Q9HYX0 symbol: PA3271 locus: PA3271 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 330 review_folder: null seedings: - node: PTN001976860 node_term: id: GO:0000155 label: phosphorelay sensor kinase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 330 leaf_taxa: 86 pseudocap_only_support: true supporting_annotations: - GO:0000155 phosphorelay sensor kinase activity | IDA | PMID:22168309 | PseudoCAP rank: 139 - uniprot: Q9I3B1 symbol: PA1611 locus: PA1611 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 330 review_folder: null seedings: - node: PTN001976860 node_term: id: GO:0000155 label: phosphorelay sensor kinase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 330 leaf_taxa: 86 pseudocap_only_support: true supporting_annotations: - GO:0000155 phosphorelay sensor kinase activity | IDA | PMID:16182517 | PseudoCAP rank: 140 - uniprot: Q9HV55 symbol: infB locus: PA4744 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 326 review_folder: null seedings: - node: PTN001897651 node_term: id: GO:0006413 label: translational initiation ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 326 leaf_taxa: 141 pseudocap_only_support: true supporting_annotations: - GO:0006413 translational initiation | IMP | PMID:15385567 | PseudoCAP rank: 141 - uniprot: P51691 symbol: atsA locus: PA0183 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 320 review_folder: null seedings: - node: PTN000819263 node_term: id: GO:0004065 label: arylsulfatase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 320 leaf_taxa: 50 pseudocap_only_support: false supporting_annotations: - GO:0004065 arylsulfatase activity | IDA | PMID:7744061 | PseudoCAP - GO:0004065 arylsulfatase activity | IDA | PMID:9748219 | UniProt rank: 142 - uniprot: Q9HZ23 symbol: cyaB locus: PA3217 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 316 review_folder: null seedings: - node: PTN002454020 node_term: id: GO:0004016 label: adenylate cyclase activity ibd_qualifier: null n_seeds: 12 sole_seed: false leaf_ibas: 158 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0004016 adenylate cyclase activity | IMP | PMID:12586068 | PseudoCAP - node: PTN002454020 node_term: id: GO:0006171 label: cAMP biosynthetic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 158 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0006171 cAMP biosynthetic process | IMP | PMID:12586068 | PseudoCAP rank: 143 - uniprot: Q9HXC7 symbol: tpbA locus: PA3885 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 297 review_folder: null seedings: - node: PTN001258896 node_term: id: GO:0016791 label: phosphatase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 297 leaf_taxa: 77 pseudocap_only_support: false supporting_annotations: - GO:0004725 protein tyrosine phosphatase activity | EXP | PMID:25909591 | UniProt - GO:0004725 protein tyrosine phosphatase activity | IDA | PMID:19543378 | PseudoCAP rank: 144 - uniprot: Q9HUF1 symbol: msrA locus: PA5018 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 289 review_folder: null seedings: - node: PTN000019085 node_term: id: GO:0034599 label: cellular response to oxidative stress ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 289 leaf_taxa: 116 pseudocap_only_support: true supporting_annotations: - GO:0034599 cellular response to oxidative stress | IMP | PMID:23687271 | PseudoCAP rank: 145 - uniprot: O52762 symbol: katA locus: PA4236 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 283 review_folder: null seedings: - node: PTN000157250 node_term: id: GO:0004096 label: catalase activity ibd_qualifier: null n_seeds: 25 sole_seed: false leaf_ibas: 283 leaf_taxa: 109 pseudocap_only_support: true supporting_annotations: - GO:0004096 catalase activity | IDA | PMID:10368148 | PseudoCAP rank: 146 - uniprot: Q9HWA7 symbol: pprA locus: PA4293 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 268 review_folder: null seedings: - node: PTN009166588 node_term: id: GO:0000155 label: phosphorelay sensor kinase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 268 leaf_taxa: 41 pseudocap_only_support: true supporting_annotations: - GO:0000155 phosphorelay sensor kinase activity | IDA | PMID:12499175 | PseudoCAP rank: 147 - uniprot: Q9I4N4 symbol: fleS locus: PA1098 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 268 review_folder: null seedings: - node: PTN009166588 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 268 leaf_taxa: 41 pseudocap_only_support: true supporting_annotations: - GO:0000160 phosphorelay signal transduction system | IDA | PMID:7591148 | PseudoCAP rank: 148 - uniprot: Q9HV74 symbol: cbrA locus: PA4725 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 268 review_folder: null seedings: - node: PTN009166588 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 268 leaf_taxa: 41 pseudocap_only_support: true supporting_annotations: - GO:0000160 phosphorelay signal transduction system | IDA | PMID:11401699 | PseudoCAP rank: 149 - uniprot: P06200 symbol: plcH locus: PA0844 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 264 review_folder: null seedings: - node: PTN001277539 node_term: id: GO:0004629 label: C-type glycerophospholipase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 253 leaf_taxa: 49 pseudocap_only_support: true supporting_annotations: - GO:0034480 phosphatidylcholine phospholipase C activity | IDA | PMID:12410824 | PseudoCAP - node: PTN001277563 node_term: id: GO:0034480 label: phosphatidylcholine phospholipase C activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 11 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0034480 phosphatidylcholine phospholipase C activity | IDA | PMID:12410824 | PseudoCAP rank: 150 - uniprot: P20577 symbol: trpC locus: PA0651 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 252 review_folder: null seedings: - node: PTN000523336 node_term: id: GO:0000162 label: L-tryptophan biosynthetic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 126 leaf_taxa: 77 pseudocap_only_support: true supporting_annotations: - GO:0000162 L-tryptophan biosynthetic process | IMP | PMID:22555873 | PseudoCAP - node: PTN000523336 node_term: id: GO:0004425 label: indole-3-glycerol-phosphate synthase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 126 leaf_taxa: 77 pseudocap_only_support: true supporting_annotations: - GO:0004425 indole-3-glycerol-phosphate synthase activity | IDA | PMID:22555873 | PseudoCAP rank: 151 - uniprot: Q9I222 symbol: PA2093 locus: PA2093 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:18086184 | PseudoCAP rank: 152 - uniprot: Q9I114 symbol: foxI locus: PA2468 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:16484199 | PseudoCAP rank: 153 - uniprot: Q9I265 symbol: PA2050 locus: PA2050 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:18086184 | PseudoCAP rank: 154 - uniprot: Q9I6Y3 symbol: PA0149 locus: PA0149 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:18086184 | PseudoCAP rank: 155 - uniprot: Q9I646 symbol: PA0472 locus: PA0472 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:16484199 | PseudoCAP rank: 156 - uniprot: Q9HUR7 symbol: PA4896 locus: PA4896 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:18086184 | PseudoCAP rank: 157 - uniprot: Q9I5P9 symbol: vreI locus: PA0675 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IMP | PMID:19730690 | PseudoCAP rank: 158 - uniprot: Q9I2W5 symbol: sigX locus: PA1776 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IDA | PMID:10438740 | PseudoCAP rank: 159 - uniprot: Q9I193 symbol: fpvI locus: PA2387 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IDA | PMID:12492864 | PseudoCAP - GO:0016987 sigma factor activity | IMP | PMID:12492864 | PseudoCAP - GO:0016987 sigma factor activity | IMP | PMID:12562796 | PseudoCAP rank: 160 - uniprot: Q06198 symbol: algU locus: PA0762 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 250 review_folder: null seedings: - node: PTN002455017 node_term: id: GO:0016987 label: sigma factor activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 250 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0016987 sigma factor activity | IDA | PMID:7644517 | PseudoCAP rank: 161 - uniprot: Q9HW35 symbol: bifA locus: PA4367 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 246 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IMP | PMID:17586641 | PseudoCAP - node: PTN009140332 node_term: id: GO:1900190 label: regulation of single-species biofilm formation ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 84 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:1900191 negative regulation of single-species biofilm formation | IMP | PMID:17586641 | PseudoCAP rank: 162 - uniprot: Q9I1Y2 symbol: PA2133 locus: PA2133 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 246 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:16477007 | PseudoCAP - node: PTN009140332 node_term: id: GO:1900190 label: regulation of single-species biofilm formation ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 84 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:1900191 negative regulation of single-species biofilm formation | IMP | PMID:16186483 | PseudoCAP rank: 163 - uniprot: Q9HVQ3 symbol: speC locus: PA4519 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 234 review_folder: null seedings: - node: PTN000159726 node_term: id: GO:0004586 label: ornithine decarboxylase activity ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 234 leaf_taxa: 101 pseudocap_only_support: true supporting_annotations: - GO:0004586 ornithine decarboxylase activity | IMP | PMID:12634339 | PseudoCAP rank: 164 - uniprot: Q9HZZ4 symbol: ohrR locus: PA2849 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 229 review_folder: null seedings: - node: PTN002109389 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 229 leaf_taxa: 33 pseudocap_only_support: false supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | EXP | PMID:20139188 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IEP | PMID:20139188 | CollecTF - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:20139188 | PseudoCAP rank: 165 - uniprot: Q9I2T3 symbol: PA1811 locus: PA1811 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 228 review_folder: null seedings: - node: PTN008624512 node_term: id: GO:0015833 label: peptide transport ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 228 leaf_taxa: 38 pseudocap_only_support: true supporting_annotations: - GO:0006857 oligopeptide transport | IMP | PMID:23979749 | PseudoCAP rank: 166 - uniprot: Q9I2T4 symbol: PA1810 locus: PA1810 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 228 review_folder: null seedings: - node: PTN008624512 node_term: id: GO:0015833 label: peptide transport ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 228 leaf_taxa: 38 pseudocap_only_support: true supporting_annotations: - GO:0006857 oligopeptide transport | IMP | PMID:23979749 | PseudoCAP rank: 167 - uniprot: Q9I1F6 symbol: gntR locus: PA2320 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 219 review_folder: null seedings: - node: PTN001248758 node_term: id: GO:0003700 label: DNA-binding transcription factor activity ibd_qualifier: null n_seeds: 11 sole_seed: false leaf_ibas: 219 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0003700 DNA-binding transcription factor activity | IDA | PMID:28752954 | PseudoCAP rank: 168 - uniprot: G3XD97 symbol: ptxS locus: PA2259 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 219 review_folder: null seedings: - node: PTN001248758 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 219 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:22844393 | PseudoCAP rank: 169 - uniprot: Q9HW93 symbol: pctC locus: PA4307 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:9353923 | PseudoCAP rank: 170 - uniprot: G3XDA3 symbol: ctpH locus: PA2561 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:10852870 | PseudoCAP rank: 171 - uniprot: Q9HW91 symbol: pctB locus: PA4310 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:9353923 | PseudoCAP rank: 172 - uniprot: Q9I0I6 symbol: ctpM locus: PA2652 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:17933940 | PseudoCAP - GO:0050918 positive chemotaxis | IMP | PMID:17933940 | PseudoCAP rank: 173 - uniprot: Q9I3F6 symbol: aer locus: PA1561 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: false supporting_annotations: - GO:0009454 aerotaxis | IMP | PMID:14987771 | PseudoCAP - GO:0052131 positive aerotaxis | IMP | PMID:14987771 | CACAO rank: 174 - uniprot: Q9HUW6 symbol: ctpL locus: PA4844 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:10852870 | PseudoCAP - GO:0050918 positive chemotaxis | IMP | PMID:24038698 | PseudoCAP rank: 175 - uniprot: G3XD24 symbol: pctA locus: PA4309 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 215 review_folder: null seedings: - node: PTN001280296 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 215 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:9353923 | PseudoCAP rank: 176 - uniprot: P23747 symbol: algB locus: PA5483 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 214 review_folder: null seedings: - node: PTN000787214 node_term: id: GO:0045893 label: positive regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 214 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:1738315 | PseudoCAP rank: 177 - uniprot: Q9HUK1 symbol: parC locus: PA4964 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 210 review_folder: null seedings: - node: PTN001607041 node_term: id: GO:0006265 label: DNA topological change ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 105 leaf_taxa: 75 pseudocap_only_support: true supporting_annotations: - GO:0006265 DNA topological change | IDA | PMID:10049263 | PseudoCAP - node: PTN001607041 node_term: id: GO:0009330 label: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 105 leaf_taxa: 75 pseudocap_only_support: true supporting_annotations: - GO:0009340 DNA topoisomerase IV complex | IDA | PMID:10049263 | PseudoCAP rank: 178 - uniprot: Q9HV50 symbol: glmM locus: PA4749 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 206 review_folder: null seedings: - node: PTN001096974 node_term: id: GO:0004615 label: phosphomannomutase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 136 leaf_taxa: 85 pseudocap_only_support: true supporting_annotations: - GO:0004615 phosphomannomutase activity | IDA | PMID:10913078 | PseudoCAP - node: PTN000501735 node_term: id: GO:0008966 label: phosphoglucosamine mutase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 38 leaf_taxa: 36 pseudocap_only_support: true supporting_annotations: - GO:0008966 phosphoglucosamine mutase activity | IDA | PMID:10913078 | PseudoCAP - node: PTN000501735 node_term: id: GO:0009252 label: peptidoglycan biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 32 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0009252 peptidoglycan biosynthetic process | IDA | PMID:10913078 | PseudoCAP rank: 179 - uniprot: Q9HZ57 symbol: PA3177 locus: PA3177 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IMP | PMID:30082282 | PseudoCAP rank: 180 - uniprot: Q9HT84 symbol: dgcP locus: PA5487 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: false supporting_annotations: - GO:0052621 diguanylate cyclase activity | EXP | PMID:25809128 | UniProt - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP rank: 181 - uniprot: Q9HXT9 symbol: wspR locus: PA3702 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP - GO:0052621 diguanylate cyclase activity | IMP | PMID:12426335 | PseudoCAP rank: 182 - uniprot: Q9HW69 symbol: PA4332 locus: PA4332 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:17586642 | PseudoCAP rank: 183 - uniprot: Q9HUW7 symbol: PA4843 locus: PA4843 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | EXP | PMID:24603766 | PseudoCAP - GO:0052621 diguanylate cyclase activity | IDA | PMID:24891445 | PseudoCAP - GO:0052621 diguanylate cyclase activity | IMP | PMID:24603766 | PseudoCAP rank: 184 - uniprot: Q9HYQ2 symbol: PA3343 locus: PA3343 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP rank: 185 - uniprot: Q9HZX6 symbol: PA2870 locus: PA2870 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP rank: 186 - uniprot: Q9I4M8 symbol: PA1107 locus: PA1107 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 205 review_folder: null seedings: - node: PTN002895344 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 19 sole_seed: false leaf_ibas: 205 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP - GO:0052621 diguanylate cyclase activity | IDA | PMID:20978535 | PseudoCAP rank: 187 - uniprot: P72131 symbol: ptxR locus: PA2258 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 202 review_folder: null seedings: - node: PTN001248394 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 202 leaf_taxa: 30 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IDA | PMID:22844393 | PseudoCAP rank: 188 - uniprot: Q04804 symbol: pfeS locus: PA2687 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 200 review_folder: null seedings: - node: PTN002463889 node_term: id: GO:0000160 label: phosphorelay signal transduction system ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 200 leaf_taxa: 59 pseudocap_only_support: true supporting_annotations: - GO:0000160 phosphorelay signal transduction system | IDA | PMID:8808923 | PseudoCAP rank: 189 - uniprot: Q9HZ76 symbol: wbpE locus: PA3155 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 193 review_folder: null seedings: - node: PTN001250039 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 98 leaf_taxa: 45 pseudocap_only_support: false supporting_annotations: - GO:0000271 polysaccharide biosynthetic process | IDA | PMID:19282284 | PseudoCAP - GO:0009103 lipopolysaccharide biosynthetic process | IDA | PMID:18621892 | UniProt - GO:0009243 O antigen biosynthetic process | EXP | PMID:18621892 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IDA | PMID:19348502 | UniProt - node: PTN001250039 node_term: id: GO:0008483 label: transaminase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 95 leaf_taxa: 45 pseudocap_only_support: false supporting_annotations: - GO:0008483 transaminase activity | EXP | PMID:19282284 | PseudoCAP - GO:0008483 transaminase activity | IDA | PMID:19348502 | UniProt rank: 190 - uniprot: Q9HTI0 symbol: PA5384 locus: PA5384 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 193 review_folder: null seedings: - node: PTN009058710 node_term: id: GO:0016787 label: hydrolase activity ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 193 leaf_taxa: 48 pseudocap_only_support: true supporting_annotations: - GO:0047619 acylcarnitine hydrolase activity | IDA | PMID:23524670 | PseudoCAP rank: 191 - uniprot: P22567 symbol: argA locus: PA5204 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 190 review_folder: null seedings: - node: PTN004744913 node_term: id: GO:0006526 label: L-arginine biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 95 leaf_taxa: 48 pseudocap_only_support: true supporting_annotations: - GO:0006526 L-arginine biosynthetic process | IMP | PMID:22447897 | PseudoCAP - node: PTN004744913 node_term: id: GO:0004358 label: L-glutamate N-acetyltransferase activity, acting on acetyl-L-ornithine as donor ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 95 leaf_taxa: 48 pseudocap_only_support: true supporting_annotations: - GO:0004358 L-glutamate N-acetyltransferase activity, acting on acetyl-L-ornithine as donor | IMP | PMID:22447897 | PseudoCAP rank: 192 - uniprot: Q9I4I1 symbol: nrdA locus: PA1156 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 186 review_folder: null seedings: - node: PTN000171388 node_term: id: GO:0005971 label: ribonucleoside-diphosphate reductase complex ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 186 leaf_taxa: 118 pseudocap_only_support: true supporting_annotations: - GO:0005971 ribonucleoside-diphosphate reductase complex | IDA | PMID:16829681 | PseudoCAP rank: 193 - uniprot: Q51567 symbol: sucD locus: PA1589 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 185 review_folder: null seedings: - node: PTN000122012 node_term: id: GO:0004775 label: succinate-CoA ligase (ADP-forming) activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 185 leaf_taxa: 127 pseudocap_only_support: true supporting_annotations: - GO:0004775 succinate-CoA ligase (ADP-forming) activity | IDA | PMID:10671455 | PseudoCAP rank: 194 - uniprot: P20580 symbol: trpE locus: PA0609 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 182 review_folder: null seedings: - node: PTN002599563 node_term: id: GO:0000162 label: L-tryptophan biosynthetic process ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 182 leaf_taxa: 95 pseudocap_only_support: true supporting_annotations: - GO:0000162 L-tryptophan biosynthetic process | IMP | PMID:2153661 | PseudoCAP rank: 195 - uniprot: P24734 symbol: ampR locus: PA4109 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 174 review_folder: null seedings: - node: PTN000794521 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 174 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:22479525 | PseudoCAP rank: 196 - uniprot: P11720 symbol: trpI locus: PA0037 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 174 review_folder: null seedings: - node: PTN000794521 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 174 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:1904858 | PseudoCAP rank: 197 - uniprot: Q9I191 symbol: pvdR locus: PA2389 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 173 review_folder: null seedings: - node: PTN001253051 node_term: id: GO:1990281 label: efflux pump complex ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 87 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:1990281 efflux pump complex | IDA | PMID:19906986 | PseudoCAP - GO:1990281 efflux pump complex | IDA | PMID:21035449 | PseudoCAP - GO:1990281 efflux pump complex | IDA | PMID:22187978 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:19906986 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:22187978 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:23766114 | PseudoCAP - node: PTN001253051 node_term: id: GO:0015562 label: efflux transmembrane transporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 86 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:21035449 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:23766114 | PseudoCAP rank: 198 - uniprot: Q9I189 symbol: opmQ locus: PA2391 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 170 review_folder: null seedings: - node: PTN008411811 node_term: id: GO:0016020 label: membrane ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 85 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:1990281 efflux pump complex | IDA | PMID:19906986 | PseudoCAP - GO:1990281 efflux pump complex | IDA | PMID:21035449 | PseudoCAP - GO:1990281 efflux pump complex | IDA | PMID:22187978 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:19906986 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:22187978 | PseudoCAP - GO:1990281 efflux pump complex | IMP | PMID:23766114 | PseudoCAP - node: PTN008411811 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 85 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:21035449 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:23766114 | PseudoCAP rank: 199 - uniprot: Q9I4D4 symbol: PA1204 locus: PA1204 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 167 review_folder: null seedings: - node: PTN001254275 node_term: id: GO:0003955 label: NAD(P)H dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 167 leaf_taxa: 74 pseudocap_only_support: true supporting_annotations: - GO:0003955 NAD(P)H dehydrogenase (quinone) activity | IMP | PMID:25085734 | PseudoCAP rank: 200 - uniprot: Q9HX68 symbol: rocA1 locus: PA3948 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 167 review_folder: null seedings: - node: PTN008449896 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 167 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:15659157 | PseudoCAP rank: 201 - uniprot: Q9I2C7 symbol: eraR locus: PA1980 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 167 review_folder: null seedings: - node: PTN008449896 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 167 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:12686116 | PseudoCAP rank: 202 - uniprot: P26993 symbol: exsA locus: PA1713 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 166 review_folder: null seedings: - node: PTN002457187 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 166 leaf_taxa: 24 pseudocap_only_support: false supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:7635828 | PseudoCAP - GO:2000144 positive regulation of DNA-templated transcription initiation | IDA | PMID:24142246 | CACAO rank: 203 - uniprot: Q9I234 symbol: kynB locus: PA2081 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 163 review_folder: null seedings: - node: PTN001258690 node_term: id: GO:0004061 label: arylformamidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 163 leaf_taxa: 62 pseudocap_only_support: false supporting_annotations: - GO:0004061 arylformamidase activity | IDA | PMID:14592712 | PseudoCAP - GO:0004061 arylformamidase activity | IDA | PMID:14592712 | UniProt - GO:0004061 arylformamidase activity | IDA | PMID:24942958 | UniProt rank: 204 - uniprot: Q9I1R7 symbol: PA2200 locus: PA2200 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 162 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:16477007 | PseudoCAP rank: 205 - uniprot: Q9HX69 symbol: rocR locus: PA3947 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 162 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: false supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | EXP | PMID:18344366 | UniProt - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | EXP | PMID:19376848 | UniProt - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:16477007 | PseudoCAP rank: 206 - uniprot: Q9HYT3 symbol: nbdA locus: PA3311 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 162 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:23729646 | PseudoCAP rank: 207 - uniprot: Q9HXH7 symbol: PA3825 locus: PA3825 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 162 review_folder: null seedings: - node: PTN002105365 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 18 sole_seed: false leaf_ibas: 162 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:16477007 | PseudoCAP rank: 208 - uniprot: Q9HTL3 symbol: recG locus: PA5345 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 158 review_folder: null seedings: - node: PTN002773745 node_term: id: GO:0003678 label: DNA helicase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 79 leaf_taxa: 70 pseudocap_only_support: true supporting_annotations: - GO:0003678 DNA helicase activity | IDA | PMID:22621928 | PseudoCAP - GO:0009378 four-way junction helicase activity | IDA | PMID:22621928 | PseudoCAP - node: PTN002773745 node_term: id: GO:0006281 label: DNA repair ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 79 leaf_taxa: 70 pseudocap_only_support: true supporting_annotations: - GO:0006281 DNA repair | IMP | PMID:10913087 | PseudoCAP - GO:0006281 DNA repair | IMP | PMID:16105671 | PseudoCAP rank: 209 - uniprot: P08308 symbol: arcB locus: PA5172 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 157 review_folder: null seedings: - node: PTN000150424 node_term: id: GO:0004585 label: ornithine carbamoyltransferase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 157 leaf_taxa: 119 pseudocap_only_support: true supporting_annotations: - GO:0004585 ornithine carbamoyltransferase activity | IMP | PMID:6438064 | PseudoCAP rank: 210 - uniprot: Q9I596 symbol: PA0845 locus: PA0845 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 156 review_folder: null seedings: - node: PTN004377481 node_term: id: GO:0017040 label: N-acylsphingosine amidohydrolase activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 156 leaf_taxa: 78 pseudocap_only_support: false supporting_annotations: - GO:0017040 N-acylsphingosine amidohydrolase activity | IDA | PMID:9603946 | UniProt - GO:0017040 N-acylsphingosine amidohydrolase activity | IMP | PMID:10593963 | PseudoCAP rank: 211 - uniprot: Q51366 symbol: gmd locus: PA5453 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 154 review_folder: null seedings: - node: PTN008684430 node_term: id: GO:0008446 label: GDP-mannose 4,6-dehydratase activity ibd_qualifier: null n_seeds: 11 sole_seed: false leaf_ibas: 154 leaf_taxa: 98 pseudocap_only_support: true supporting_annotations: - GO:0008446 GDP-mannose 4,6-dehydratase activity | EXP | PMID:9781879 | PseudoCAP rank: 212 - uniprot: Q9HT74 symbol: np20 locus: PA5499 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 154 review_folder: null seedings: - node: PTN002112386 node_term: id: GO:0045892 label: negative regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 16 sole_seed: false leaf_ibas: 83 leaf_taxa: 37 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:24086521 | PseudoCAP - node: PTN002112386 node_term: id: GO:1900376 label: regulation of secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 71 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:1900376 regulation of secondary metabolite biosynthetic process | IMP | PMID:12426334 | PseudoCAP rank: 213 - uniprot: P07344 symbol: trpA locus: PA0035 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 151 review_folder: null seedings: - node: PTN000034360 node_term: id: GO:0000162 label: L-tryptophan biosynthetic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 151 leaf_taxa: 80 pseudocap_only_support: true supporting_annotations: - GO:0000162 L-tryptophan biosynthetic process | IDA | PMID:3127651 | PseudoCAP rank: 214 - uniprot: Q59643 symbol: hemB locus: PA5243 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 149 review_folder: null seedings: - node: PTN000156046 node_term: id: GO:0004655 label: porphobilinogen synthase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 149 leaf_taxa: 126 pseudocap_only_support: false supporting_annotations: - GO:0004655 porphobilinogen synthase activity | EXP | PMID:16819823 | UniProt - GO:0004655 porphobilinogen synthase activity | IMP | PMID:9529530 | PseudoCAP rank: 215 - uniprot: P20576 symbol: trpG locus: PA0649 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 149 review_folder: null seedings: - node: PTN000230074 node_term: id: GO:0000162 label: L-tryptophan biosynthetic process ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 149 leaf_taxa: 93 pseudocap_only_support: true supporting_annotations: - GO:0000162 L-tryptophan biosynthetic process | IMP | PMID:2153661 | PseudoCAP rank: 216 - uniprot: Q9HVC0 symbol: PA4675 locus: PA4675 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 142 review_folder: null seedings: - node: PTN004738955 node_term: id: GO:0015344 label: siderophore uptake transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 142 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015344 siderophore uptake transmembrane transporter activity | IMP | PMID:16549659 | PseudoCAP rank: 217 - uniprot: Q9HWM5 symbol: PA4156 locus: PA4156 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 142 review_folder: null seedings: - node: PTN004738955 node_term: id: GO:0015344 label: siderophore uptake transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 142 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015344 siderophore uptake transmembrane transporter activity | IMP | PMID:21546589 | PseudoCAP rank: 218 - uniprot: Q9I527 symbol: pirA locus: PA0931 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 142 review_folder: null seedings: - node: PTN004738955 node_term: id: GO:0015344 label: siderophore uptake transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 142 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015344 siderophore uptake transmembrane transporter activity | IMP | PMID:15899402 | PseudoCAP rank: 219 - uniprot: Q9I6Y9 symbol: nuh locus: PA0143 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 140 review_folder: null seedings: - node: PTN000266727 node_term: id: GO:0008477 label: purine nucleosidase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 140 leaf_taxa: 76 pseudocap_only_support: true supporting_annotations: - GO:0008477 purine nucleosidase activity | IMP | PMID:15995202 | PseudoCAP rank: 220 - uniprot: Q9HV30 symbol: cueR locus: PA4778 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 140 review_folder: null seedings: - node: PTN001575588 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 114 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:20233934 | PseudoCAP - node: PTN001249777 node_term: id: GO:0045893 label: positive regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 26 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:20233934 | PseudoCAP rank: 221 - uniprot: Q9HUB3 symbol: tatC locus: PA5070 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 129 review_folder: null seedings: - node: PTN000769484 node_term: id: GO:0033281 label: TAT protein transport complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 129 leaf_taxa: 76 pseudocap_only_support: true supporting_annotations: - GO:0033281 TAT protein transport complex | IMP | PMID:16621825 | PseudoCAP rank: 222 - uniprot: Q9I6H4 symbol: PA0317 locus: PA0317 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 127 review_folder: null seedings: - node: PTN005178867 node_term: id: GO:0051990 label: (R)-2-hydroxyglutarate dehydrogenase activity ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 127 leaf_taxa: 103 pseudocap_only_support: true supporting_annotations: - GO:0051990 (R)-2-hydroxyglutarate dehydrogenase activity | IMP | PMID:28827360 | PseudoCAP rank: 223 - uniprot: O33877 symbol: fabA locus: PA1610 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 124 review_folder: null seedings: - node: PTN008624492 node_term: id: GO:0006633 label: fatty acid biosynthetic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 124 leaf_taxa: 73 pseudocap_only_support: true supporting_annotations: - GO:0006636 unsaturated fatty acid biosynthetic process | IMP | PMID:9286984 | PseudoCAP rank: 224 - uniprot: Q9HV34 symbol: speE2 locus: PA4774 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 120 review_folder: null seedings: - node: PTN000168372 node_term: id: GO:0006596 label: polyamine biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 120 leaf_taxa: 56 pseudocap_only_support: true supporting_annotations: - GO:0008295 spermidine biosynthetic process | IMP | PMID:22155771 | PseudoCAP rank: 225 - uniprot: Q9I190 symbol: pvdT locus: PA2390 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 118 review_folder: null seedings: - node: PTN001254814 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 118 leaf_taxa: 36 pseudocap_only_support: true supporting_annotations: - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:21035449 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IDA | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:19906986 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:22187978 | PseudoCAP - GO:0015562 efflux transmembrane transporter activity | IMP | PMID:23766114 | PseudoCAP rank: 226 - uniprot: Q9HV49 symbol: folP locus: PA4750 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 118 review_folder: null seedings: - node: PTN000468650 node_term: id: GO:0004156 label: dihydropteroate synthase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 118 leaf_taxa: 98 pseudocap_only_support: true supporting_annotations: - GO:0004156 dihydropteroate synthase activity | IDA | PMID:1657875 | PseudoCAP rank: 227 - uniprot: P19572 symbol: lysA locus: PA5277 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 116 review_folder: null seedings: - node: PTN000159906 node_term: id: GO:0008836 label: diaminopimelate decarboxylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 116 leaf_taxa: 80 pseudocap_only_support: true supporting_annotations: - GO:0008836 diaminopimelate decarboxylase activity | IMP | PMID:3018430 | PseudoCAP rank: 228 - uniprot: Q9HWU0 symbol: PA4088 locus: PA4088 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 115 review_folder: null seedings: - node: PTN000241365 node_term: id: GO:0016853 label: isomerase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 100 leaf_taxa: 69 pseudocap_only_support: true supporting_annotations: - GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity | EXP | PMID:29684343 | PseudoCAP - node: PTN000241400 node_term: id: GO:0042286 label: glutamate-1-semialdehyde 2,1-aminomutase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 15 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity | EXP | PMID:29684343 | PseudoCAP rank: 229 - uniprot: Q9HUT5 symbol: brlR locus: PA4878 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 114 review_folder: null seedings: - node: PTN001575588 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 114 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IDA | PMID:23935054 | PseudoCAP - GO:0045893 positive regulation of DNA-templated transcription | IDA | PMID:22730129 | PseudoCAP rank: 230 - uniprot: Q9I6J1 symbol: spuD locus: PA0300 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 113 review_folder: null seedings: - node: PTN001249912 node_term: id: GO:0015846 label: polyamine transport ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 78 leaf_taxa: 57 pseudocap_only_support: true supporting_annotations: - GO:0015846 polyamine transport | IMP | PMID:12081945 | PseudoCAP - node: PTN008624361 node_term: id: GO:0019810 label: putrescine binding ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 35 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0019810 putrescine binding | IDA | PMID:22300763 | PseudoCAP rank: 231 - uniprot: Q9I6J0 symbol: spuE locus: PA0301 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 113 review_folder: null seedings: - node: PTN001249912 node_term: id: GO:0015846 label: polyamine transport ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 78 leaf_taxa: 57 pseudocap_only_support: true supporting_annotations: - GO:0015846 polyamine transport | IMP | PMID:12081945 | PseudoCAP - node: PTN008624361 node_term: id: GO:0019809 label: spermidine binding ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 35 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0019809 spermidine binding | IDA | PMID:22300763 | PseudoCAP rank: 232 - uniprot: Q9HVR5 symbol: PA4506 locus: PA4506 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 106 review_folder: null seedings: - node: PTN001952620 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 106 leaf_taxa: 40 pseudocap_only_support: true supporting_annotations: - GO:0071916 dipeptide transmembrane transporter activity | IDA | PMID:25338022 | PseudoCAP rank: 233 - uniprot: Q9I6J8 symbol: aguB locus: PA0293 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 106 review_folder: null seedings: - node: PTN000557706 node_term: id: GO:0050126 label: N-carbamoylputrescine amidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 74 leaf_taxa: 57 pseudocap_only_support: true supporting_annotations: - GO:0050126 N-carbamoylputrescine amidase activity | IMP | PMID:6423933 | PseudoCAP - node: PTN000557638 node_term: id: GO:0016811 label: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 32 leaf_taxa: 23 pseudocap_only_support: true supporting_annotations: - GO:0050126 N-carbamoylputrescine amidase activity | IMP | PMID:6423933 | PseudoCAP rank: 234 - uniprot: Q9HT24 symbol: glmR locus: PA5550 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 104 review_folder: null seedings: - node: PTN000769142 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 104 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:14982774 | PseudoCAP rank: 235 - uniprot: Q9HUX1 symbol: speA locus: PA4839 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 103 review_folder: null seedings: - node: PTN008680444 node_term: id: GO:0008792 label: arginine decarboxylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 103 leaf_taxa: 55 pseudocap_only_support: false supporting_annotations: - GO:0008792 arginine decarboxylase activity | IMP | PMID:12634339 | CACAO - GO:0008792 arginine decarboxylase activity | IMP | PMID:12634339 | PseudoCAP rank: 236 - uniprot: Q9I0K4 symbol: PA2634 locus: PA2634 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 102 review_folder: null seedings: - node: PTN000493043 node_term: id: GO:0004451 label: isocitrate lyase activity ibd_qualifier: null n_seeds: 9 sole_seed: false leaf_ibas: 102 leaf_taxa: 75 pseudocap_only_support: true supporting_annotations: - GO:0004451 isocitrate lyase activity | IDA | PMID:17319879 | PseudoCAP rank: 237 - uniprot: Q9HU21 symbol: rmlC locus: PA5164 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 101 review_folder: null seedings: - node: PTN000471580 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 38 leaf_taxa: 30 pseudocap_only_support: false supporting_annotations: - GO:0000271 polysaccharide biosynthetic process | IDA | PMID:17046787 | UniProt - GO:0009103 lipopolysaccharide biosynthetic process | IDA | PMID:17046787 | UniProt - GO:0009244 lipopolysaccharide core region biosynthetic process | IDA | PMID:11065359 | PseudoCAP - node: PTN000471594 node_term: id: GO:0008830 label: dTDP-4-dehydrorhamnose 3,5-epimerase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 25 leaf_taxa: 21 pseudocap_only_support: false supporting_annotations: - GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity | EXP | PMID:17046787 | PseudoCAP - GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity | IDA | PMID:17046787 | UniProt - node: PTN000471594 node_term: id: GO:0019305 label: dTDP-rhamnose biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 25 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0019305 dTDP-rhamnose biosynthetic process | IDA | PMID:17046787 | PseudoCAP - node: PTN000471580 node_term: id: GO:0016854 label: racemase and epimerase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 9 pseudocap_only_support: false supporting_annotations: - GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity | EXP | PMID:17046787 | PseudoCAP - GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity | IDA | PMID:17046787 | UniProt rank: 238 - uniprot: Q9I296 symbol: liuA locus: PA2015 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 101 review_folder: null seedings: - node: PTN000744030 node_term: id: GO:0003995 label: acyl-CoA dehydrogenase activity ibd_qualifier: null n_seeds: 14 sole_seed: false leaf_ibas: 101 leaf_taxa: 51 pseudocap_only_support: true supporting_annotations: - GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity | IDA | PMID:18625020 | PseudoCAP - GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity | IMP | PMID:16517656 | PseudoCAP rank: 239 - uniprot: G3XD19 symbol: wzx locus: PA3153 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 101 review_folder: null seedings: - node: PTN001250140 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 101 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0005886 plasma membrane | IDA | PMID:24023388 | PseudoCAP - GO:0098567 periplasmic side of plasma membrane | IDA | PMID:20824106 | PseudoCAP rank: 240 - uniprot: Q9HU83 symbol: hutU locus: PA5100 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 100 review_folder: null seedings: - node: PTN002639709 node_term: id: GO:0006548 label: L-histidine catabolic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 50 leaf_taxa: 47 pseudocap_only_support: true supporting_annotations: - GO:0006548 L-histidine catabolic process | IMP | PMID:4290562 | PseudoCAP - node: PTN002639709 node_term: id: GO:0016153 label: urocanate hydratase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 50 leaf_taxa: 47 pseudocap_only_support: true supporting_annotations: - GO:0016153 urocanate hydratase activity | IMP | PMID:4290562 | PseudoCAP rank: 241 - uniprot: O05927 symbol: cysH locus: PA1756 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 96 review_folder: genes/PSEAE/cysH seedings: - node: PTN008207357 node_term: id: GO:0000103 label: sulfate assimilation ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 96 leaf_taxa: 48 pseudocap_only_support: true supporting_annotations: - GO:0000103 sulfate assimilation | IMP | PMID:10613872 | PseudoCAP rank: 242 - uniprot: Q9HXE7 symbol: PA3859 locus: PA3859 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 94 review_folder: null seedings: - node: PTN004181029 node_term: id: GO:0052689 label: carboxylic ester hydrolase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 94 leaf_taxa: 56 pseudocap_only_support: true supporting_annotations: - GO:0052689 carboxylic ester hydrolase activity | IDA | PMID:15717224 | PseudoCAP rank: 243 - uniprot: G3XCZ6 symbol: fabD locus: PA2968 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 90 review_folder: null seedings: - node: PTN002448244 node_term: id: GO:0006633 label: fatty acid biosynthetic process ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 90 leaf_taxa: 79 pseudocap_only_support: true supporting_annotations: - GO:0006633 fatty acid biosynthetic process | IDA | PMID:10464226 | PseudoCAP rank: 244 - uniprot: Q9I496 symbol: PA1242 locus: PA1242 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 90 review_folder: null seedings: - node: PTN002459139 node_term: id: GO:0004252 label: serine-type endopeptidase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 90 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0004252 serine-type endopeptidase activity | IDA | PMID:26175208 | PseudoCAP rank: 245 - uniprot: Q52463 symbol: alg8 locus: PA3541 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 85 review_folder: genes/PSEAE/alg8 seedings: - node: PTN000530809 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 85 leaf_taxa: 31 pseudocap_only_support: true supporting_annotations: - GO:0042121 alginic acid biosynthetic process | IMP | PMID:18524915 | PseudoCAP rank: 246 - uniprot: Q9I025 symbol: arr locus: PA2818 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 84 review_folder: null seedings: - node: PTN009140332 node_term: id: GO:1900190 label: regulation of single-species biofilm formation ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 84 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:1900190 regulation of single-species biofilm formation | IDA | PMID:16121184 | PseudoCAP rank: 247 - uniprot: Q9I487 symbol: PA1257 locus: PA1257 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 84 review_folder: null seedings: - node: PTN000770157 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 84 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0034589 hydroxyproline transport | IMP | PMID:18833300 | PseudoCAP rank: 248 - uniprot: Q9HZ64 symbol: PA3170 locus: PA3170 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 82 review_folder: null seedings: - node: PTN005182504 node_term: id: GO:0019239 label: deaminase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 82 leaf_taxa: 64 pseudocap_only_support: false supporting_annotations: - GO:0004000 adenosine deaminase activity | IDA | PMID:23050701 | PseudoCAP - GO:0090614 5'-methylthioadenosine deaminase activity | IDA | PMID:23968233 | CACAO rank: 249 - uniprot: G3XD61 symbol: wbpI locus: PA3148 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 82 review_folder: null seedings: - node: PTN001056041 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 41 leaf_taxa: 29 pseudocap_only_support: true supporting_annotations: - GO:0000271 polysaccharide biosynthetic process | IMP | PMID:10930727 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IMP | PMID:10930727 | PseudoCAP - node: PTN001056041 node_term: id: GO:0008761 label: UDP-N-acetylglucosamine 2-epimerase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 41 leaf_taxa: 29 pseudocap_only_support: false supporting_annotations: - GO:0008761 UDP-N-acetylglucosamine 2-epimerase activity | IDA | PMID:17346239 | UniProt - GO:0008761 UDP-N-acetylglucosamine 2-epimerase activity | IMP | PMID:10930727 | PseudoCAP rank: 250 - uniprot: P47205 symbol: lpxC locus: PA4406 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 79 review_folder: null seedings: - node: PTN002134692 node_term: id: GO:0009245 label: lipid A biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 79 leaf_taxa: 62 pseudocap_only_support: true supporting_annotations: - GO:0009245 lipid A biosynthetic process | IDA | PMID:9068651 | PseudoCAP rank: 251 - uniprot: Q9HUB5 symbol: tatA locus: PA5068 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 78 review_folder: null seedings: - node: PTN002452729 node_term: id: GO:0033281 label: TAT protein transport complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 39 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0033281 TAT protein transport complex | IMP | PMID:16621825 | PseudoCAP - node: PTN002452729 node_term: id: GO:0008320 label: transmembrane protein transporter activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 39 leaf_taxa: 28 pseudocap_only_support: true supporting_annotations: - GO:0008320 transmembrane protein transporter activity | IMP | PMID:16621825 | PseudoCAP rank: 252 - uniprot: Q9I6V6 symbol: mcpB locus: PA0176 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 76 review_folder: null seedings: - node: PTN002079588 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 76 leaf_taxa: 12 pseudocap_only_support: false supporting_annotations: - GO:0009454 aerotaxis | IMP | PMID:14987771 | PseudoCAP - GO:0052131 positive aerotaxis | IMP | PMID:14987771 | CACAO rank: 253 - uniprot: P21630 symbol: braG locus: PA1070 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 73 review_folder: null seedings: - node: PTN000657089 node_term: id: GO:0015807 label: L-amino acid transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 73 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0015808 L-alanine transport | IMP | PMID:18833300 | PseudoCAP rank: 254 - uniprot: Q9HYZ8 symbol: lpxL locus: PA3242 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 72 review_folder: null seedings: - node: PTN004745460 node_term: id: GO:0016746 label: acyltransferase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 36 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0008913 Kdo2-lipid IVA acyltransferase activity | IDA | PMID:26223882 | PseudoCAP - node: PTN004745460 node_term: id: GO:0009247 label: glycolipid biosynthetic process ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 23 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0009245 lipid A biosynthetic process | IDA | PMID:26223882 | PseudoCAP - node: PTN000770079 node_term: id: GO:0009245 label: lipid A biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0009245 lipid A biosynthetic process | IDA | PMID:26223882 | PseudoCAP rank: 255 - uniprot: Q9I181 symbol: pvdJ locus: PA2400 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 72 review_folder: null seedings: - node: PTN002378821 node_term: id: GO:0044550 label: secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 13 sole_seed: false leaf_ibas: 72 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:19854904 | PseudoCAP rank: 256 - uniprot: Q9I182 symbol: pvdD locus: PA2399 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 72 review_folder: null seedings: - node: PTN002378821 node_term: id: GO:0044550 label: secondary metabolite biosynthetic process ibd_qualifier: null n_seeds: 13 sole_seed: false leaf_ibas: 72 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:12700264 | PseudoCAP - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:15271355 | PseudoCAP - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:9770291 | PseudoCAP rank: 257 - uniprot: Q9HUJ0 symbol: PA4975 locus: PA4975 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 71 review_folder: null seedings: - node: PTN000024521 node_term: id: GO:0003955 label: NAD(P)H dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 71 leaf_taxa: 30 pseudocap_only_support: true supporting_annotations: - GO:0003955 NAD(P)H dehydrogenase (quinone) activity | IMP | PMID:25085734 | PseudoCAP rank: 258 - uniprot: Q9HV31 symbol: pmrB locus: PA4777 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 71 review_folder: null seedings: - node: PTN001976770 node_term: id: GO:0000160 label: phosphorelay signal transduction system ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 71 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0000160 phosphorelay signal transduction system | IDA | PMID:14507375 | PseudoCAP rank: 259 - uniprot: Q9HUQ1 symbol: PA4912 locus: PA4912 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 68 review_folder: null seedings: - node: PTN000209860 node_term: id: GO:0055085 label: transmembrane transport ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 50 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP - node: PTN000765102 node_term: id: GO:0042941 label: D-alanine transmembrane transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 18 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP rank: 260 - uniprot: Q9I648 symbol: fiuA locus: PA0470 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 68 review_folder: null seedings: - node: PTN000793005 node_term: id: GO:0033214 label: siderophore-iron import into cell ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 68 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0042928 ferrichrome import into cell | IMP | PMID:16484199 | PseudoCAP - GO:0042928 ferrichrome import into cell | IMP | PMID:20047910 | PseudoCAP rank: 261 - uniprot: Q9HT32 symbol: PA5542 locus: PA5542 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 68 review_folder: null seedings: - node: PTN009168613 node_term: id: GO:0016787 label: hydrolase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 68 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0008800 beta-lactamase activity | IDA | PMID:25185138 | PseudoCAP rank: 262 - uniprot: Q9I116 symbol: foxA locus: PA2466 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 68 review_folder: null seedings: - node: PTN000793005 node_term: id: GO:0015344 label: siderophore uptake transmembrane transporter activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 68 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015344 siderophore uptake transmembrane transporter activity | IMP | PMID:16484199 | PseudoCAP rank: 263 - uniprot: Q9I3N2 symbol: ccmF locus: PA1480 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 67 review_folder: null seedings: - node: PTN009171456 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 67 leaf_taxa: 36 pseudocap_only_support: true supporting_annotations: - GO:0004096 catalase activity | IMP | PMID:16824107 | PseudoCAP rank: 264 - uniprot: P72151 symbol: fliC locus: PA1092 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 67 review_folder: null seedings: - node: PTN001250065 node_term: id: GO:0071973 label: bacterial-type flagellum-dependent cell motility ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 67 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0071973 bacterial-type flagellum-dependent cell motility | IDA | PMID:9423837 | PseudoCAP rank: 265 - uniprot: Q9HUF5 symbol: waaC locus: PA5011 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 64 review_folder: null seedings: - node: PTN001575314 node_term: id: GO:0009244 label: lipopolysaccharide core region biosynthetic process ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 64 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0009244 lipopolysaccharide core region biosynthetic process | IDA | PMID:9171387 | PseudoCAP rank: 266 - uniprot: G3XD35 symbol: waaF locus: PA5012 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 64 review_folder: null seedings: - node: PTN001575314 node_term: id: GO:0009244 label: lipopolysaccharide core region biosynthetic process ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 64 leaf_taxa: 24 pseudocap_only_support: true supporting_annotations: - GO:0009244 lipopolysaccharide core region biosynthetic process | IDA | PMID:9171387 | PseudoCAP rank: 267 - uniprot: P57668 symbol: tpx locus: PA2532 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 64 review_folder: null seedings: - node: PTN002454730 node_term: id: GO:0034599 label: cellular response to oxidative stress ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 32 leaf_taxa: 30 pseudocap_only_support: true supporting_annotations: - GO:0070301 cellular response to hydrogen peroxide | IMP | PMID:22609922 | PseudoCAP - node: PTN002454730 node_term: id: GO:0008379 label: thioredoxin peroxidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 32 leaf_taxa: 30 pseudocap_only_support: true supporting_annotations: - GO:0008379 thioredoxin peroxidase activity | IDA | PMID:22609922 | PseudoCAP rank: 268 - uniprot: Q9I520 symbol: PA0938 locus: PA0938 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 62 review_folder: null seedings: - node: PTN000794252 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 62 leaf_taxa: 23 pseudocap_only_support: true supporting_annotations: - GO:0005886 plasma membrane | IDA | PMID:12534470 | PseudoCAP - GO:0005886 plasma membrane | IDA | PMID:23955007 | PseudoCAP - GO:0098567 periplasmic side of plasma membrane | IDA | PMID:12534470 | PseudoCAP rank: 269 - uniprot: G3XCY2 symbol: wzz locus: PA3160 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 62 review_folder: null seedings: - node: PTN000794252 node_term: id: GO:0005886 label: plasma membrane ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 62 leaf_taxa: 23 pseudocap_only_support: true supporting_annotations: - GO:0098567 periplasmic side of plasma membrane | IDA | PMID:9045803 | PseudoCAP rank: 270 - uniprot: Q9I5M1 symbol: migA locus: PA0705 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 62 review_folder: null seedings: - node: PTN000531320 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 44 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IDA | PMID:18178733 | PseudoCAP - node: PTN000531351 node_term: id: GO:0009244 label: lipopolysaccharide core region biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 18 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0009244 lipopolysaccharide core region biosynthetic process | IMP | PMID:18178733 | PseudoCAP rank: 271 - uniprot: Q9HUG5 symbol: wapR locus: PA5000 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 62 review_folder: null seedings: - node: PTN000531320 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 44 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IDA | PMID:18178733 | PseudoCAP - node: PTN000531351 node_term: id: GO:0009244 label: lipopolysaccharide core region biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 18 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0009244 lipopolysaccharide core region biosynthetic process | IDA | PMID:22685285 | PseudoCAP - GO:0009244 lipopolysaccharide core region biosynthetic process | IMP | PMID:18178733 | PseudoCAP rank: 272 - uniprot: Q9I5F6 symbol: putA locus: PA0782 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 62 review_folder: null seedings: - node: PTN000193023 node_term: id: GO:0003842 label: L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 62 leaf_taxa: 52 pseudocap_only_support: true supporting_annotations: - GO:0003842 L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity | IDA | PMID:6819140 | PseudoCAP rank: 273 - uniprot: G3XCU3 symbol: wbpX locus: PA5449 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 60 review_folder: null seedings: - node: PTN005302544 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 60 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IMP | PMID:9680202 | PseudoCAP rank: 274 - uniprot: Q9I7B5 symbol: PA0011 locus: PA0011 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 59 review_folder: null seedings: - node: PTN004745460 node_term: id: GO:0016746 label: acyltransferase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 36 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups | IDA | PMID:26223882 | PseudoCAP - node: PTN004745460 node_term: id: GO:0009247 label: glycolipid biosynthetic process ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 23 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0009245 lipid A biosynthetic process | IDA | PMID:26223882 | PseudoCAP rank: 275 - uniprot: Q9HU50 symbol: PA5134 locus: PA5134 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 58 review_folder: null seedings: - node: PTN001279639 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 58 leaf_taxa: 32 pseudocap_only_support: true supporting_annotations: - GO:0007165 signal transduction | IDA | PMID:24928312 | PseudoCAP rank: 276 - uniprot: Q9HYY3 symbol: prc locus: PA3257 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 58 review_folder: null seedings: - node: PTN001279639 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 58 leaf_taxa: 32 pseudocap_only_support: true supporting_annotations: - GO:0007165 signal transduction | IMP | PMID:24373018 | PseudoCAP rank: 277 - uniprot: Q9HUI9 symbol: aruH locus: PA4976 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 57 review_folder: null seedings: - node: PTN002482828 node_term: id: GO:0008483 label: transaminase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 57 leaf_taxa: 41 pseudocap_only_support: false supporting_annotations: - GO:0008483 transaminase activity | IDA | PMID:17416668 | PseudoCAP - GO:0008483 transaminase activity | IDA | PMID:17416668 | UniProt rank: 278 - uniprot: Q9HTB5 symbol: PA5455 locus: PA5455 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 57 review_folder: null seedings: - node: PTN002288302 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 57 leaf_taxa: 43 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IDA | PMID:23341552 | PseudoCAP rank: 279 - uniprot: Q9HTB4 symbol: PA5456 locus: PA5456 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 57 review_folder: null seedings: - node: PTN002288302 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 57 leaf_taxa: 43 pseudocap_only_support: true supporting_annotations: - GO:0016757 glycosyltransferase activity | IDA | PMID:23341552 | PseudoCAP rank: 280 - uniprot: Q9ZN70 symbol: ppx locus: PA5241 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 56 review_folder: null seedings: - node: PTN000768198 node_term: id: GO:0016462 label: pyrophosphatase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 48 leaf_taxa: 39 pseudocap_only_support: false supporting_annotations: - GO:0004309 exopolyphosphatase activity | EXP | PMID:26576296 | UniProt - GO:0004309 exopolyphosphatase activity | IDA | PMID:10382967 | PseudoCAP - node: PTN000768205 node_term: id: GO:0004309 label: exopolyphosphatase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: false supporting_annotations: - GO:0004309 exopolyphosphatase activity | EXP | PMID:26576296 | UniProt - GO:0004309 exopolyphosphatase activity | IDA | PMID:10382967 | PseudoCAP rank: 281 - uniprot: G3XCW9 symbol: ampD locus: PA4522 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 55 review_folder: null seedings: - node: PTN001252273 node_term: id: GO:0008745 label: N-acetylmuramoyl-L-alanine amidase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 37 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0008745 N-acetylmuramoyl-L-alanine amidase activity | IMP | PMID:9835532 | PseudoCAP - node: PTN002019137 node_term: id: GO:0009276 label: Gram-negative-bacterium-type cell wall ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 18 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0009276 Gram-negative-bacterium-type cell wall | IMP | PMID:9835532 | PseudoCAP rank: 282 - uniprot: Q9I5D1 symbol: ampDh3 locus: PA0807 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 55 review_folder: null seedings: - node: PTN001252273 node_term: id: GO:0008745 label: N-acetylmuramoyl-L-alanine amidase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 37 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0008745 N-acetylmuramoyl-L-alanine amidase activity | IDA | PMID:23510438 | PseudoCAP - node: PTN002019137 node_term: id: GO:0009276 label: Gram-negative-bacterium-type cell wall ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 18 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0009276 Gram-negative-bacterium-type cell wall | IDA | PMID:23510438 | PseudoCAP rank: 283 - uniprot: Q9HT86 symbol: ampDh2 locus: PA5485 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 55 review_folder: null seedings: - node: PTN001252273 node_term: id: GO:0008745 label: N-acetylmuramoyl-L-alanine amidase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 37 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0008745 N-acetylmuramoyl-L-alanine amidase activity | IDA | PMID:23510438 | PseudoCAP - node: PTN002019137 node_term: id: GO:0009276 label: Gram-negative-bacterium-type cell wall ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 18 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0009276 Gram-negative-bacterium-type cell wall | IDA | PMID:23510438 | PseudoCAP rank: 284 - uniprot: Q9I192 symbol: fpvR locus: PA2388 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 53 review_folder: null seedings: - node: PTN001250434 node_term: id: GO:0016989 label: sigma factor antagonist activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 53 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0016989 sigma factor antagonist activity | IMP | PMID:12492864 | PseudoCAP rank: 285 - uniprot: Q9I647 symbol: PA0471 locus: PA0471 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 53 review_folder: null seedings: - node: PTN001250434 node_term: id: GO:0016989 label: sigma factor antagonist activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 53 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0016989 sigma factor antagonist activity | IMP | PMID:16484199 | PseudoCAP rank: 286 - uniprot: Q9I115 symbol: foxR locus: PA2467 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 53 review_folder: null seedings: - node: PTN001250434 node_term: id: GO:0016989 label: sigma factor antagonist activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 53 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0016989 sigma factor antagonist activity | IMP | PMID:16484199 | PseudoCAP rank: 287 - uniprot: P50587 symbol: pyrE locus: PA5331 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 52 review_folder: null seedings: - node: PTN002928258 node_term: id: GO:0004588 label: orotate phosphoribosyltransferase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 26 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0004588 orotate phosphoribosyltransferase activity | IMP | PMID:25917504 | PseudoCAP - node: PTN002928258 node_term: id: GO:0006221 label: pyrimidine nucleotide biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 26 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0006221 pyrimidine nucleotide biosynthetic process | IMP | PMID:25917504 | PseudoCAP rank: 288 - uniprot: Q9HUN4 symbol: alr locus: PA4930 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 51 review_folder: null seedings: - node: PTN000775508 node_term: id: GO:0008784 label: alanine racemase activity ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 51 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0008784 alanine racemase activity | IDA | PMID:20971724 | PseudoCAP rank: 289 - uniprot: Q9HTQ2 symbol: dadX locus: PA5302 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 51 review_folder: null seedings: - node: PTN000775508 node_term: id: GO:0008784 label: alanine racemase activity ibd_qualifier: null n_seeds: 8 sole_seed: false leaf_ibas: 51 leaf_taxa: 33 pseudocap_only_support: true supporting_annotations: - GO:0008784 alanine racemase activity | IDA | PMID:10977898 | PseudoCAP rank: 290 - uniprot: Q9HTF3 symbol: gbcB locus: PA5411 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 51 review_folder: null seedings: - node: PTN005342051 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 51 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0016491 oxidoreductase activity | IDA | PMID:17951379 | PseudoCAP rank: 291 - uniprot: Q9HTH5 symbol: cdhR locus: PA5389 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 50 review_folder: null seedings: - node: PTN000111456 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 50 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IMP | PMID:19406895 | PseudoCAP rank: 292 - uniprot: Q9HTI4 symbol: gbdR locus: PA5380 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 50 review_folder: null seedings: - node: PTN000111456 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 50 leaf_taxa: 13 pseudocap_only_support: false supporting_annotations: - GO:0006355 regulation of DNA-templated transcription | IDA | PMID:17951379 | PseudoCAP - GO:0006355 regulation of DNA-templated transcription | IMP | PMID:24097953 | PseudoCAP - GO:0045893 positive regulation of DNA-templated transcription | EXP | PMID:19103776 | CollecTF - GO:0045893 positive regulation of DNA-templated transcription | IEP | PMID:19103776 | CollecTF rank: 293 - uniprot: Q9I5F5 symbol: putP locus: PA0783 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 49 review_folder: null seedings: - node: PTN005155964 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 29 leaf_taxa: 21 pseudocap_only_support: true supporting_annotations: - GO:0015193 L-proline transmembrane transporter activity | IMP | PMID:12270821 | PseudoCAP - node: PTN001371338 node_term: id: GO:0015193 label: L-proline transmembrane transporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 20 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0015193 L-proline transmembrane transporter activity | IMP | PMID:12270821 | PseudoCAP rank: 294 - uniprot: G3XD94 symbol: wbpA locus: PA3159 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 47 review_folder: null seedings: - node: PTN000890018 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 30 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0003954 NADH dehydrogenase activity | EXP | PMID:18621892 | PseudoCAP - GO:0047004 UDP-N-acetylglucosamine 6-dehydrogenase activity | EXP | PMID:15226302 | PseudoCAP - node: PTN000146785 node_term: id: GO:0000271 label: polysaccharide biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 17 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0000271 polysaccharide biosynthetic process | IDA | PMID:15226302 | PseudoCAP - GO:0009243 O antigen biosynthetic process | EXP | PMID:18621892 | PseudoCAP rank: 295 - uniprot: Q9I0Z0 symbol: mexT locus: PA2492 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 46 review_folder: null seedings: - node: PTN001248361 node_term: id: GO:0006355 label: regulation of DNA-templated transcription ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 46 leaf_taxa: 9 pseudocap_only_support: false supporting_annotations: - GO:0045892 negative regulation of DNA-templated transcription | IMP | PMID:41128522 | UniProt - GO:0045893 positive regulation of DNA-templated transcription | EXP | PMID:19846594 | CollecTF - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:10515918 | PseudoCAP - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:39708318 | UniProt - GO:0045893 positive regulation of DNA-templated transcription | IMP | PMID:9044268 | UniProt rank: 296 - uniprot: Q9HZL6 symbol: PA2988 locus: PA2988 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 46 review_folder: null seedings: - node: PTN002524722 node_term: id: GO:0044874 label: lipoprotein localization to outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 46 leaf_taxa: 26 pseudocap_only_support: false supporting_annotations: - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | CACAO - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | PseudoCAP rank: 297 - uniprot: Q9HZL8 symbol: PA2986 locus: PA2986 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 46 review_folder: null seedings: - node: PTN002524722 node_term: id: GO:0044874 label: lipoprotein localization to outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 46 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | PseudoCAP rank: 298 - uniprot: G3XCT7 symbol: ampG locus: PA4393 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 45 review_folder: null seedings: - node: PTN008542531 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 45 leaf_taxa: 40 pseudocap_only_support: true supporting_annotations: - GO:0022857 transmembrane transporter activity | IMP | PMID:20713660 | PseudoCAP rank: 299 - uniprot: Q9HWG8 symbol: PA4218 locus: PA4218 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 45 review_folder: null seedings: - node: PTN008542531 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 45 leaf_taxa: 40 pseudocap_only_support: true supporting_annotations: - GO:0022857 transmembrane transporter activity | IDA | PMID:21192796 | PseudoCAP rank: 300 - uniprot: Q9I4V9 symbol: PA1014 locus: PA1014 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 44 review_folder: null seedings: - node: PTN000531320 node_term: id: GO:0016757 label: glycosyltransferase activity ibd_qualifier: null n_seeds: 7 sole_seed: false leaf_ibas: 44 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0008919 lipopolysaccharide glucosyltransferase I activity | IDA | PMID:21441506 | PseudoCAP rank: 301 - uniprot: P14532 symbol: ccpA locus: PA4587 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 44 review_folder: null seedings: - node: PTN000779264 node_term: id: GO:0004130 label: cytochrome-c peroxidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 44 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0004130 cytochrome-c peroxidase activity | IDA | PMID:1657179 | PseudoCAP rank: 302 - uniprot: Q9HUK9 symbol: rhdA locus: PA4956 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 44 review_folder: null seedings: - node: PTN000146159 node_term: id: GO:0016783 label: sulfurtransferase activity ibd_qualifier: null n_seeds: 10 sole_seed: false leaf_ibas: 44 leaf_taxa: 34 pseudocap_only_support: false supporting_annotations: - GO:0004792 thiosulfate-cyanide sulfurtransferase activity | EXP | PMID:15522204 | UniProt - GO:0004792 thiosulfate-cyanide sulfurtransferase activity | IMP | PMID:17098912 | PseudoCAP rank: 303 - uniprot: Q9HZG1 symbol: PA3047 locus: PA3047 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 40 review_folder: null seedings: - node: PTN000768632 node_term: id: GO:0000270 label: peptidoglycan metabolic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 20 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0009252 peptidoglycan biosynthetic process | IDA | PMID:25495032 | PseudoCAP - node: PTN000768632 node_term: id: GO:0004185 label: serine-type carboxypeptidase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 20 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0004185 serine-type carboxypeptidase activity | IDA | PMID:25495032 | PseudoCAP rank: 304 - uniprot: G3XD21 symbol: mexX locus: PA2019 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 38 review_folder: null seedings: - node: PTN001249140 node_term: id: GO:0046677 label: response to antibiotic ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 38 leaf_taxa: 12 pseudocap_only_support: false supporting_annotations: - GO:0046677 response to antibiotic | EXP | PMID:10952562 | PseudoCAP - GO:0046677 response to antibiotic | EXP | PMID:16030228 | PseudoCAP - GO:0046677 response to antibiotic | IMP | PMID:10543738 | UniProt - GO:0046677 response to antibiotic | IMP | PMID:10952562 | PseudoCAP rank: 305 - uniprot: P52477 symbol: mexA locus: PA0425 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 38 review_folder: null seedings: - node: PTN001249140 node_term: id: GO:0046677 label: response to antibiotic ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 38 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0046677 response to antibiotic | IDA | PMID:8540696 | PseudoCAP rank: 306 - uniprot: Q9HZ17 symbol: azoR3 locus: PA3223 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 38 review_folder: null seedings: - node: PTN000024600 node_term: id: GO:0016655 label: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 38 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IDA | PMID:24915188 | PseudoCAP rank: 307 - uniprot: Q9I2E2 symbol: azoR2 locus: PA1962 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 38 review_folder: null seedings: - node: PTN000024600 node_term: id: GO:0016655 label: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 38 leaf_taxa: 25 pseudocap_only_support: true supporting_annotations: - GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IDA | PMID:24915188 | PseudoCAP rank: 308 - uniprot: Q9I5F3 symbol: azoR1 locus: PA0785 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 38 review_folder: null seedings: - node: PTN000024600 node_term: id: GO:0016655 label: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 38 leaf_taxa: 25 pseudocap_only_support: false supporting_annotations: - GO:0003960 quinone reductase (NADPH) activity | EXP | PMID:24915188 | UniProt - GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IDA | PMID:24915188 | PseudoCAP rank: 309 - uniprot: Q9I1Y5 symbol: cupA3 locus: PA2130 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 36 review_folder: null seedings: - node: PTN001252526 node_term: id: GO:0007155 label: cell adhesion ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 36 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0007155 cell adhesion | IMP | PMID:11381121 | PseudoCAP - GO:0007155 cell adhesion | IMP | PMID:15090530 | PseudoCAP rank: 310 - uniprot: Q9I4L5 symbol: tpbB locus: PA1120 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 35 review_folder: null seedings: - node: PTN005315326 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 35 leaf_taxa: 16 pseudocap_only_support: false supporting_annotations: - GO:0052621 diguanylate cyclase activity | EXP | PMID:20300602 | UniProt - GO:0052621 diguanylate cyclase activity | EXP | PMID:24278422 | UniProt - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP - GO:0052621 diguanylate cyclase activity | IMP | PMID:19543378 | PseudoCAP rank: 311 - uniprot: Q9I594 symbol: PA0847 locus: PA0847 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 35 review_folder: null seedings: - node: PTN005315326 node_term: id: GO:0052621 label: diguanylate cyclase activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 35 leaf_taxa: 16 pseudocap_only_support: true supporting_annotations: - GO:0052621 diguanylate cyclase activity | IDA | PMID:16477007 | PseudoCAP rank: 312 - uniprot: G3XD50 symbol: wbpL locus: PA3145 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 35 review_folder: null seedings: - node: PTN000532005 node_term: id: GO:0009103 label: lipopolysaccharide biosynthetic process ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 35 leaf_taxa: 27 pseudocap_only_support: true supporting_annotations: - GO:0009103 lipopolysaccharide biosynthetic process | IMP | PMID:9680202 | PseudoCAP - GO:0009243 O antigen biosynthetic process | IDA | PMID:9680202 | PseudoCAP rank: 313 - uniprot: P21175 symbol: braC locus: PA1074 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN002524712 node_term: id: GO:0015829 label: valine transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 17 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:1903805 L-valine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP - node: PTN002524712 node_term: id: GO:0015818 label: isoleucine transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 17 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:1903806 L-isoleucine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP rank: 314 - uniprot: G3XCZ2 symbol: algZ locus: PA5262 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN002531636 node_term: id: GO:0007165 label: signal transduction ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 34 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0000160 phosphorelay signal transduction system | IDA | PMID:8790418 | PseudoCAP rank: 315 - uniprot: Q9HX24 symbol: sltB1 locus: PA4001 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN002410022 node_term: id: GO:0008933 label: peptidoglycan lytic transglycosylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 34 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0008933 peptidoglycan lytic transglycosylase activity | IDA | PMID:11790124 | PseudoCAP rank: 316 - uniprot: Q9HVX3 symbol: mltB1 locus: PA4444 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN002410022 node_term: id: GO:0008933 label: peptidoglycan lytic transglycosylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 34 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0008933 peptidoglycan lytic transglycosylase activity | IDA | PMID:11790124 | PseudoCAP rank: 317 - uniprot: Q9HX28 symbol: PA3992 locus: PA3992 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN002410022 node_term: id: GO:0008933 label: peptidoglycan lytic transglycosylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 34 leaf_taxa: 18 pseudocap_only_support: true supporting_annotations: - GO:0008933 peptidoglycan lytic transglycosylase activity | IDA | PMID:27035839 | PseudoCAP rank: 318 - uniprot: Q9HTI9 symbol: betT1 locus: PA5375 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN001247333 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 34 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0005275 amine transmembrane transporter activity | IDA | PMID:21478341 | PseudoCAP rank: 319 - uniprot: Q9HX83 symbol: PA3933 locus: PA3933 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN001247333 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 34 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0005275 amine transmembrane transporter activity | IDA | PMID:21478341 | PseudoCAP rank: 320 - uniprot: Q9HTR3 symbol: PA5291 locus: PA5291 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 34 review_folder: null seedings: - node: PTN001247333 node_term: id: GO:0022857 label: transmembrane transporter activity ibd_qualifier: null n_seeds: 5 sole_seed: false leaf_ibas: 34 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0005275 amine transmembrane transporter activity | IDA | PMID:18156257 | PseudoCAP - GO:0015653 glycine betaine:proton symporter activity | IDA | PMID:18156257 | PseudoCAP rank: 321 - uniprot: Q9I291 symbol: galU locus: PA2023 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 33 review_folder: null seedings: - node: PTN000501197 node_term: id: GO:0009244 label: lipopolysaccharide core region biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 33 leaf_taxa: 27 pseudocap_only_support: true supporting_annotations: - GO:0009244 lipopolysaccharide core region biosynthetic process | IMP | PMID:12044687 | PseudoCAP rank: 322 - uniprot: Q9I3G2 symbol: ccoP2 locus: PA1555 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 32 review_folder: null seedings: - node: PTN002435498 node_term: id: GO:0004129 label: cytochrome-c oxidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 32 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0004129 cytochrome-c oxidase activity | IMP | PMID:14763990 | PseudoCAP rank: 323 - uniprot: Q9I3G5 symbol: ccoP1 locus: PA1552 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 32 review_folder: null seedings: - node: PTN002435498 node_term: id: GO:0004129 label: cytochrome-c oxidase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 32 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0004129 cytochrome-c oxidase activity | IMP | PMID:14763990 | PseudoCAP rank: 324 - uniprot: Q9HUA1 symbol: PA5082 locus: PA5082 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 31 review_folder: null seedings: - node: PTN004739212 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 31 leaf_taxa: 14 pseudocap_only_support: true supporting_annotations: - GO:0042940 D-amino acid transport | IMP | PMID:25082951 | PseudoCAP rank: 325 - uniprot: Q9I402 symbol: PA1342 locus: PA1342 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 31 review_folder: null seedings: - node: PTN004739212 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 31 leaf_taxa: 14 pseudocap_only_support: true supporting_annotations: - GO:0042940 D-amino acid transport | IMP | PMID:25082951 | PseudoCAP rank: 326 - uniprot: Q9I1X7 symbol: ligD locus: PA2138 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 30 review_folder: null seedings: - node: PTN001627042 node_term: id: GO:0003910 label: DNA ligase (ATP) activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 15 leaf_taxa: 10 pseudocap_only_support: false supporting_annotations: - GO:0003910 DNA ligase (ATP) activity | IDA | PMID:15520014 | PseudoCAP - GO:0003910 DNA ligase (ATP) activity | IDA | PMID:15520014 | UniProt - node: PTN001627042 node_term: id: GO:0003887 label: DNA-directed DNA polymerase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 15 leaf_taxa: 10 pseudocap_only_support: false supporting_annotations: - GO:0003887 DNA-directed DNA polymerase activity | IDA | PMID:15520014 | PseudoCAP - GO:0003887 DNA-directed DNA polymerase activity | IDA | PMID:15520014 | UniProt rank: 327 - uniprot: Q9HTB7 symbol: wbpW locus: PA5452 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 30 review_folder: null seedings: - node: PTN000283179 node_term: id: GO:0009298 label: GDP-mannose biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 30 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0009298 GDP-mannose biosynthetic process | IDA | PMID:9781879 | PseudoCAP rank: 328 - uniprot: Q9HT87 symbol: PA5484 locus: PA5484 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 30 review_folder: null seedings: - node: PTN001293174 node_term: id: GO:0000155 label: phosphorelay sensor kinase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 30 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0000155 phosphorelay sensor kinase activity | IDA | PMID:9218420 | PseudoCAP rank: 329 - uniprot: Q9I2U4 symbol: parS locus: PA1798 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 30 review_folder: null seedings: - node: PTN001293174 node_term: id: GO:0000155 label: phosphorelay sensor kinase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 30 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0000155 phosphorelay sensor kinase activity | IMP | PMID:20547815 | PseudoCAP rank: 330 - uniprot: P07874 symbol: algA locus: PA3551 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 30 review_folder: null seedings: - node: PTN000283179 node_term: id: GO:0004475 label: mannose-1-phosphate guanylyltransferase (GTP) activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 30 leaf_taxa: 26 pseudocap_only_support: true supporting_annotations: - GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity | IDA | PMID:1846611 | PseudoCAP rank: 331 - uniprot: Q9HV35 symbol: speH locus: PA4773 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 29 review_folder: null seedings: - node: PTN002140323 node_term: id: GO:0004014 label: adenosylmethionine decarboxylase activity ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 29 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0004014 adenosylmethionine decarboxylase activity | IMP | PMID:22155771 | PseudoCAP rank: 332 - uniprot: Q9HUL1 symbol: motA locus: PA4954 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 29 review_folder: null seedings: - node: PTN001252377 node_term: id: GO:0071978 label: bacterial-type flagellum-dependent swarming motility ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 29 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:15629949 | PseudoCAP - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:25349157 | PseudoCAP rank: 333 - uniprot: G3XD73 symbol: motC locus: PA1460 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 29 review_folder: null seedings: - node: PTN001252377 node_term: id: GO:0071978 label: bacterial-type flagellum-dependent swarming motility ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 29 leaf_taxa: 19 pseudocap_only_support: true supporting_annotations: - GO:0071978 bacterial-type flagellum-dependent swarming motility | IMP | PMID:15629949 | PseudoCAP rank: 334 - uniprot: Q9HTI8 symbol: PA5376 locus: PA5376 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 28 review_folder: null seedings: - node: PTN002466744 node_term: id: GO:0043190 label: ATP-binding cassette (ABC) transporter complex ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 14 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0043190 ATP-binding cassette (ABC) transporter complex | IDA | PMID:19919675 | PseudoCAP - node: PTN002466744 node_term: id: GO:0005275 label: amine transmembrane transporter activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 14 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0005275 amine transmembrane transporter activity | IDA | PMID:19919675 | PseudoCAP rank: 335 - uniprot: Q9HW06 symbol: PA4400 locus: PA4400 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 27 review_folder: null seedings: - node: PTN000755027 node_term: id: GO:0006281 label: DNA repair ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 27 leaf_taxa: 22 pseudocap_only_support: true supporting_annotations: - GO:0006281 DNA repair | IDA | PMID:12445642 | PseudoCAP rank: 336 - uniprot: Q00514 symbol: xcpT locus: PA3101 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN000764351 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:8331069 | PseudoCAP - node: PTN000764351 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 337 - uniprot: Q00515 symbol: xcpU locus: PA3100 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN000764351 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:8331069 | PseudoCAP - node: PTN000764351 node_term: id: GO:0015628 label: protein secretion by the type II secretion system ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 13 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015628 protein secretion by the type II secretion system | IDA | PMID:9818381 | PseudoCAP rank: 338 - uniprot: Q9I741 symbol: vgrG1a locus: PA0091 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN002088178 node_term: id: GO:0033103 label: protein secretion by the type VI secretion system ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033103 protein secretion by the type VI secretion system | IDA | PMID:20114026 | PseudoCAP - GO:0033103 protein secretion by the type VI secretion system | IMP | PMID:21325275 | PseudoCAP - node: PTN002088178 node_term: id: GO:0033104 label: type VI protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033104 type VI protein secretion system complex | IDA | PMID:20114026 | PseudoCAP - GO:0033104 type VI protein secretion system complex | IMP | PMID:21325275 | PseudoCAP rank: 339 - uniprot: Q9I0F3 symbol: vgrG1c locus: PA2685 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN002088178 node_term: id: GO:0033103 label: protein secretion by the type VI secretion system ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033103 protein secretion by the type VI secretion system | IDA | PMID:20114026 | PseudoCAP - GO:0033103 protein secretion by the type VI secretion system | IMP | PMID:21325275 | PseudoCAP - node: PTN002088178 node_term: id: GO:0033104 label: type VI protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033104 type VI protein secretion system complex | IDA | PMID:20114026 | PseudoCAP - GO:0033104 type VI protein secretion system complex | IMP | PMID:21325275 | PseudoCAP rank: 340 - uniprot: Q9I737 symbol: vgrG1b locus: PA0095 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 26 review_folder: null seedings: - node: PTN002088178 node_term: id: GO:0033103 label: protein secretion by the type VI secretion system ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033103 protein secretion by the type VI secretion system | IMP | PMID:21325275 | PseudoCAP - node: PTN002088178 node_term: id: GO:0033104 label: type VI protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0033104 type VI protein secretion system complex | IMP | PMID:21325275 | PseudoCAP rank: 341 - uniprot: Q9HUQ3 symbol: PA4910 locus: PA4910 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 25 review_folder: null seedings: - node: PTN000656921 node_term: id: GO:0042941 label: D-alanine transmembrane transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 25 leaf_taxa: 15 pseudocap_only_support: true supporting_annotations: - GO:0042941 D-alanine transmembrane transport | IMP | PMID:18833300 | PseudoCAP rank: 342 - uniprot: Q9HT75 symbol: PA5498 locus: PA5498 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN000767207 node_term: id: GO:0006829 label: zinc ion transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 24 leaf_taxa: 20 pseudocap_only_support: true supporting_annotations: - GO:0006829 zinc ion transport | IMP | PMID:26290475 | PseudoCAP rank: 343 - uniprot: P26276 symbol: algC locus: PA5322 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002464904 node_term: id: GO:0004615 label: phosphomannomutase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 24 leaf_taxa: 19 pseudocap_only_support: false supporting_annotations: - GO:0004615 phosphomannomutase activity | IDA | PMID:8050998 | UniProt - GO:0004615 phosphomannomutase activity | IMP | PMID:1903398 | PseudoCAP - GO:0004615 phosphomannomutase activity | IMP | PMID:22513190 | PseudoCAP rank: 344 - uniprot: P32722 symbol: oprD locus: PA0958 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002160747 node_term: id: GO:0015288 label: porin activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 24 leaf_taxa: 6 pseudocap_only_support: false supporting_annotations: - GO:0015288 porin activity | IDA | PMID:2118530 | UniProt - GO:0015288 porin activity | IMP | PMID:2120174 | PseudoCAP rank: 345 - uniprot: Q9HVS0 symbol: opdP locus: PA4501 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002160747 node_term: id: GO:0015288 label: porin activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 24 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015288 porin activity | IDA | PMID:25338022 | PseudoCAP rank: 346 - uniprot: G3XDA5 symbol: oprE locus: PA0291 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 24 review_folder: null seedings: - node: PTN002160747 node_term: id: GO:0015288 label: porin activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 24 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015288 porin activity | IMP | PMID:2120174 | PseudoCAP rank: 347 - uniprot: Q9I5P0 symbol: PA0685 locus: PA0685 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 23 review_folder: null seedings: - node: PTN000768388 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 23 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:19815547 | PseudoCAP rank: 348 - uniprot: Q9I2M7 symbol: xqhA locus: PA1868 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 23 review_folder: null seedings: - node: PTN000768388 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 23 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:17351035 | PseudoCAP rank: 349 - uniprot: P13982 symbol: arcC locus: PA5173 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 22 review_folder: null seedings: - node: PTN001252214 node_term: id: GO:0016301 label: kinase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 15 leaf_taxa: 12 pseudocap_only_support: false supporting_annotations: - GO:0008804 carbamate kinase activity | EXP | PMID:6286599 | UniProt - GO:0008804 carbamate kinase activity | IMP | PMID:6438064 | PseudoCAP - node: PTN000764469 node_term: id: GO:0008804 label: carbamate kinase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: false supporting_annotations: - GO:0008804 carbamate kinase activity | EXP | PMID:6286599 | UniProt - GO:0008804 carbamate kinase activity | IMP | PMID:6438064 | PseudoCAP rank: 350 - uniprot: Q9I0P7 symbol: PA2590 locus: PA2590 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 22 review_folder: null seedings: - node: PTN002933024 node_term: id: GO:0019867 label: outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 22 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0019867 outer membrane | IDA | PMID:18086184 | PseudoCAP rank: 351 - uniprot: Q9I245 symbol: PA2070 locus: PA2070 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 22 review_folder: null seedings: - node: PTN002933024 node_term: id: GO:0019867 label: outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 22 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0019867 outer membrane | IDA | PMID:18086184 | PseudoCAP rank: 352 - uniprot: Q9I226 symbol: PA2089 locus: PA2089 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 22 review_folder: null seedings: - node: PTN002933024 node_term: id: GO:0019867 label: outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 22 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0019867 outer membrane | IDA | PMID:18086184 | PseudoCAP rank: 353 - uniprot: Q9I258 symbol: PA2057 locus: PA2057 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 22 review_folder: null seedings: - node: PTN002933024 node_term: id: GO:0019867 label: outer membrane ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 22 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0019867 outer membrane | IDA | PMID:18086184 | PseudoCAP rank: 354 - uniprot: Q9I194 symbol: pvdQ locus: PA2385 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 21 review_folder: null seedings: - node: PTN002151232 node_term: id: GO:0016811 label: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 21 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IDA | PMID:16495538 | PseudoCAP rank: 355 - uniprot: Q9I4U2 symbol: quiP locus: PA1032 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 21 review_folder: null seedings: - node: PTN002151232 node_term: id: GO:0016811 label: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 21 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IMP | PMID:16461666 | PseudoCAP rank: 356 - uniprot: Q9I6I6 symbol: PA0305 locus: PA0305 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 21 review_folder: null seedings: - node: PTN002151232 node_term: id: GO:0016811 label: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 21 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IDA | PMID:21372094 | PseudoCAP rank: 357 - uniprot: Q9HVD2 symbol: phr locus: PA4660 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 20 review_folder: null seedings: - node: PTN000155970 node_term: id: GO:0009416 label: response to light stimulus ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 20 leaf_taxa: 17 pseudocap_only_support: true supporting_annotations: - GO:0009650 UV protection | IMP | PMID:11282583 | PseudoCAP rank: 358 - uniprot: Q9HYU4 symbol: fadD1 locus: PA3299 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 20 review_folder: null seedings: - node: PTN001534887 node_term: id: GO:0006631 label: fatty acid metabolic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 20 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0006631 fatty acid metabolic process | IDA | PMID:21042406 | PseudoCAP - GO:0042758 long-chain fatty acid catabolic process | IDA | PMID:21042406 | PseudoCAP rank: 359 - uniprot: Q9HUZ9 symbol: fdnI locus: PA4810 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 19 review_folder: null seedings: - node: PTN001247840 node_term: id: GO:0036397 label: formate dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 14 leaf_taxa: 9 pseudocap_only_support: true supporting_annotations: - GO:0036397 formate dehydrogenase (quinone) activity | IDA | PMID:3038081 | PseudoCAP - node: PTN001247839 node_term: id: GO:0016491 label: oxidoreductase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 5 leaf_taxa: 4 pseudocap_only_support: true supporting_annotations: - GO:0036397 formate dehydrogenase (quinone) activity | IDA | PMID:3038081 | PseudoCAP rank: 360 - uniprot: Q9HUZ8 symbol: fdnH locus: PA4811 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 18 review_folder: null seedings: - node: PTN001732897 node_term: id: GO:0036397 label: formate dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 18 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0036397 formate dehydrogenase (quinone) activity | IDA | PMID:3038081 | PseudoCAP rank: 361 - uniprot: Q51508 symbol: pchA locus: PA4231 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN000132907 node_term: id: GO:0008909 label: isochorismate synthase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 17 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0008909 isochorismate synthase activity | IDA | PMID:12624097 | PseudoCAP rank: 362 - uniprot: Q9I6J4 symbol: spuA locus: PA0297 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN000230196 node_term: id: GO:0006598 label: polyamine catabolic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 17 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0046203 spermidine catabolic process | IMP | PMID:21622750 | PseudoCAP rank: 363 - uniprot: Q51434 symbol: cheZ locus: PA1457 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 17 review_folder: null seedings: - node: PTN001098776 node_term: id: GO:0006935 label: chemotaxis ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 17 leaf_taxa: 13 pseudocap_only_support: true supporting_annotations: - GO:0006935 chemotaxis | IMP | PMID:7860605 | PseudoCAP rank: 364 - uniprot: Q14T72 symbol: fdnG locus: PA4812 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 16 review_folder: null seedings: - node: PTN000745948 node_term: id: GO:0036397 label: formate dehydrogenase (quinone) activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 16 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0036397 formate dehydrogenase (quinone) activity | IDA | PMID:3038081 | PseudoCAP rank: 365 - uniprot: Q9HZL7 symbol: lolD locus: PA2987 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 15 review_folder: null seedings: - node: PTN000656700 node_term: id: GO:0044874 label: lipoprotein localization to outer membrane ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 15 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | PseudoCAP rank: 366 - uniprot: Q9I6Y4 symbol: PA0148 locus: PA0148 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN000150991 node_term: id: GO:0000034 label: adenine deaminase activity ibd_qualifier: null n_seeds: 6 sole_seed: false leaf_ibas: 14 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0000034 adenine deaminase activity | IDA | PMID:21710971 | PseudoCAP rank: 367 - uniprot: Q9HTS8 symbol: cyaA locus: PA5272 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN002215143 node_term: id: GO:0004016 label: adenylate cyclase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0004016 adenylate cyclase activity | IMP | PMID:12586068 | PseudoCAP - node: PTN002215143 node_term: id: GO:0006171 label: cAMP biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0006171 cAMP biosynthetic process | IMP | PMID:12586068 | PseudoCAP rank: 368 - uniprot: Q9HUF2 symbol: PA5017 locus: PA5017 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN002403463 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 14 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:22493016 | PseudoCAP rank: 369 - uniprot: Q9I310 symbol: mucR locus: PA1727 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN002403463 node_term: id: GO:0071111 label: cyclic-guanylate-specific phosphodiesterase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 14 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071111 cyclic-guanylate-specific phosphodiesterase activity | IDA | PMID:23729646 | PseudoCAP rank: 370 - uniprot: Q9HXN4 symbol: PA3761 locus: PA3761 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 14 review_folder: null seedings: - node: PTN000768523 node_term: id: GO:0015764 label: N-acetylglucosamine transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 14 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0015764 N-acetylglucosamine transport | IMP | PMID:18833300 | PseudoCAP rank: 371 - uniprot: Q9I5P4 symbol: PA0681 locus: PA0681 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 13 review_folder: null seedings: - node: PTN000764351 node_term: id: GO:0015627 label: type II protein secretion system complex ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 13 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0015627 type II protein secretion system complex | IDA | PMID:21586577 | PseudoCAP rank: 372 - uniprot: Q9I1Y8 symbol: PA2127 locus: PA2127 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000764275 node_term: id: GO:0071453 label: cellular response to oxygen levels ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 12 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071453 cellular response to oxygen levels | IEP | PMID:17890313 | PseudoCAP - GO:0071453 cellular response to oxygen levels | IEP | PMID:20553552 | PseudoCAP rank: 373 - uniprot: Q9I1Y9 symbol: PA2126 locus: PA2126 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000764275 node_term: id: GO:0071453 label: cellular response to oxygen levels ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 12 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0071453 cellular response to oxygen levels | IEP | PMID:17890313 | PseudoCAP - GO:0071453 cellular response to oxygen levels | IEP | PMID:20553552 | PseudoCAP rank: 374 - uniprot: Q9HY80 symbol: bfd locus: PA3530 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN002205442 node_term: id: GO:0051537 label: 2 iron, 2 sulfur cluster binding ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 12 leaf_taxa: 12 pseudocap_only_support: true supporting_annotations: - GO:0051537 2 iron, 2 sulfur cluster binding | IDA | PMID:17915950 | PseudoCAP rank: 375 - uniprot: O50175 symbol: astB locus: PA0899 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000764516 node_term: id: GO:0006527 label: L-arginine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 12 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0006527 L-arginine catabolic process | IDA | PMID:16593724 | PseudoCAP rank: 376 - uniprot: P80357 symbol: astA locus: PA0896 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000764516 node_term: id: GO:0006527 label: L-arginine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 12 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0006527 L-arginine catabolic process | IDA | PMID:16593724 | PseudoCAP rank: 377 - uniprot: P80358 symbol: aruG locus: PA0897 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000764516 node_term: id: GO:0006527 label: L-arginine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 12 leaf_taxa: 6 pseudocap_only_support: true supporting_annotations: - GO:0006527 L-arginine catabolic process | IDA | PMID:16593724 | PseudoCAP rank: 378 - uniprot: Q9HZY8 symbol: tesA locus: PA2856 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 12 review_folder: null seedings: - node: PTN000769562 node_term: id: GO:0004622 label: phosphatidylcholine lysophospholipase A1 activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 12 leaf_taxa: 10 pseudocap_only_support: true supporting_annotations: - GO:0004622 phosphatidylcholine lysophospholipase A1 activity | IDA | PMID:23874889 | PseudoCAP rank: 379 - uniprot: P21482 symbol: dsbB1 locus: PA5256 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 11 review_folder: null seedings: - node: PTN002195183 node_term: id: GO:0006457 label: protein folding ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 11 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0006457 protein folding | IMP | PMID:24327342 | PseudoCAP rank: 380 - uniprot: P57701 symbol: dsbB2 locus: PA0538 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 11 review_folder: null seedings: - node: PTN002195183 node_term: id: GO:0006457 label: protein folding ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 11 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0006457 protein folding | IMP | PMID:24327342 | PseudoCAP rank: 381 - uniprot: Q9X4P2 symbol: rppH locus: PA0336 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 11 review_folder: null seedings: - node: PTN001500664 node_term: id: GO:0034353 label: mRNA 5'-diphosphatase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 11 leaf_taxa: 11 pseudocap_only_support: true supporting_annotations: - GO:0034353 mRNA 5'-diphosphatase activity | IMP | PMID:28833678 | PseudoCAP rank: 382 - uniprot: Q9HU99 symbol: dadA2 locus: PA5084 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN008552203 node_term: id: GO:0008718 label: D-amino-acid dehydrogenase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 10 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0008718 D-amino-acid dehydrogenase activity | IDA | PMID:17021207 | PseudoCAP rank: 383 - uniprot: Q9HTQ0 symbol: dadA1 locus: PA5304 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN008552203 node_term: id: GO:0008718 label: D-amino-acid dehydrogenase activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 10 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0008718 D-amino-acid dehydrogenase activity | IDA | PMID:21378189 | PseudoCAP rank: 384 - uniprot: Q9I3F1 symbol: PA1566 locus: PA1566 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN001839150 node_term: id: GO:0006598 label: polyamine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 10 leaf_taxa: 4 pseudocap_only_support: true supporting_annotations: - GO:0006598 polyamine catabolic process | IMP | PMID:21622750 | PseudoCAP rank: 385 - uniprot: Q9I6J5 symbol: spuI locus: PA0296 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN001839150 node_term: id: GO:0006598 label: polyamine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 10 leaf_taxa: 4 pseudocap_only_support: true supporting_annotations: - GO:0009447 putrescine catabolic process | IMP | PMID:12081945 | PseudoCAP - GO:0046203 spermidine catabolic process | IMP | PMID:12081945 | PseudoCAP rank: 386 - uniprot: Q9I6J3 symbol: spuB locus: PA0298 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 10 review_folder: null seedings: - node: PTN001839150 node_term: id: GO:0006598 label: polyamine catabolic process ibd_qualifier: null n_seeds: 4 sole_seed: false leaf_ibas: 10 leaf_taxa: 4 pseudocap_only_support: true supporting_annotations: - GO:0046203 spermidine catabolic process | IMP | PMID:21622750 | PseudoCAP rank: 387 - uniprot: Q9I0M4 symbol: lolA locus: PA2614 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN002185387 node_term: id: GO:0044874 label: lipoprotein localization to outer membrane ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 9 leaf_taxa: 9 pseudocap_only_support: false supporting_annotations: - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | CACAO - GO:0044874 lipoprotein localization to outer membrane | IDA | PMID:17350955 | PseudoCAP rank: 388 - uniprot: Q9I0F2 symbol: pfeE locus: PA2689 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 9 review_folder: null seedings: - node: PTN002868704 node_term: id: GO:0016788 label: hydrolase activity, acting on ester bonds ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 9 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0016788 hydrolase activity, acting on ester bonds | IDA | PMID:30086222 | PseudoCAP rank: 389 - uniprot: Q9HT69 symbol: PA5504 locus: PA5504 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 8 review_folder: null seedings: - node: PTN000765163 node_term: id: GO:0006865 label: amino acid transport ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 8 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:1903810 L-histidine import across plasma membrane | IMP | PMID:18833300 | PseudoCAP rank: 390 - uniprot: Q9I169 symbol: PA2412 locus: PA2412 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 8 review_folder: null seedings: - node: PTN002212932 node_term: id: GO:0019290 label: siderophore biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 8 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:12207696 | PseudoCAP - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:12686626 | PseudoCAP - GO:0002049 pyoverdine biosynthetic process | IMP | PMID:17502378 | PseudoCAP rank: 391 - uniprot: P38107 symbol: mucA locus: PA0763 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 8 review_folder: null seedings: - node: PTN002211401 node_term: id: GO:0016989 label: sigma factor antagonist activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 8 leaf_taxa: 8 pseudocap_only_support: true supporting_annotations: - GO:0016989 sigma factor antagonist activity | IMP | PMID:22842599 | PseudoCAP rank: 392 - uniprot: Q9HZP8 symbol: fabV locus: PA2950 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002206122 node_term: id: GO:0004318 label: enoyl-[acyl-carrier-protein] reductase (NADH) activity ibd_qualifier: null n_seeds: 3 sole_seed: false leaf_ibas: 7 leaf_taxa: 6 pseudocap_only_support: false supporting_annotations: - GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity | IDA | PMID:19933806 | UniProt - GO:0004318 enoyl-[acyl-carrier-protein] reductase (NADH) activity | IMP | PMID:27965638 | PseudoCAP rank: 393 - uniprot: Q9I238 symbol: PA2077 locus: PA2077 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002826263 node_term: id: GO:0031408 label: oxylipin biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0031408 oxylipin biosynthetic process | IMP | PMID:24980978 | PseudoCAP rank: 394 - uniprot: Q9I237 symbol: PA2078 locus: PA2078 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN002826263 node_term: id: GO:0031408 label: oxylipin biosynthetic process ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 3 pseudocap_only_support: true supporting_annotations: - GO:0031408 oxylipin biosynthetic process | IMP | PMID:24980978 | PseudoCAP rank: 395 - uniprot: Q9HYN9 symbol: dsdA locus: PA3357 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 7 review_folder: null seedings: - node: PTN000034699 node_term: id: GO:0008721 label: D-serine ammonia-lyase activity ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 7 leaf_taxa: 7 pseudocap_only_support: true supporting_annotations: - GO:0008721 D-serine ammonia-lyase activity | IDA | PMID:26957519 | PseudoCAP rank: 396 - uniprot: P00282 symbol: azu locus: PA4922 uniprot_reviewed: true tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 6 review_folder: null seedings: - node: PTN002212874 node_term: id: GO:0005507 label: copper ion binding ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 6 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0005507 copper ion binding | IMP | PMID:14758526 | PseudoCAP rank: 397 - uniprot: Q9HXW3 symbol: PA3677 locus: PA3677 uniprot_reviewed: false tier: 2 leaf_ibas_sole_seeded: 0 leaf_ibas_total: 5 review_folder: null seedings: - node: PTN002427209 node_term: id: GO:0046677 label: response to antibiotic ibd_qualifier: null n_seeds: 2 sole_seed: false leaf_ibas: 5 leaf_taxa: 5 pseudocap_only_support: true supporting_annotations: - GO:0046677 response to antibiotic | IMP | PMID:12193619 | PseudoCAP rank: 398