species: ECOLI annotation_release: current WP_ records level1_genome: loci_compared: 4123 per_aspect: molecular_function: loci_ncbi: 1887 loci_goa: 3215 loci_goa_electronic: 2703 loci_both: 1834 loci_ncbi_only: 53 loci_goa_only: 1381 terms_ncbi: 2781 terms_goa: 11403 biological_process: loci_ncbi: 1671 loci_goa: 3226 loci_goa_electronic: 2516 loci_both: 1624 loci_ncbi_only: 47 loci_goa_only: 1602 terms_ncbi: 1958 terms_goa: 9108 cellular_component: loci_ncbi: 622 loci_goa: 3052 loci_goa_electronic: 2289 loci_both: 616 loci_ncbi_only: 6 loci_goa_only: 2436 terms_ncbi: 672 terms_goa: 6238 genes_ncbi_only: count: 27 by_ncbi_source: ArchId (CDD/SPARCLE): 22 HMM:NF: 3 HMM:TIGR: 2 genes_goa_only: count: 1621 top_refseq_names: MFS transporter: 5 LysR substrate-binding domain-containing protein: 4 autotransporter outer membrane beta-barrel domain-containing protein: 4 lipoprotein: 4 GNAT family N-acetyltransferase: 3 fimbrial protein: 3 HlyC/CorC family transporter: 3 type I toxin-antitoxin system toxin Ldr family protein: 3 type I toxin-antitoxin system toxin MokC: 2 FAD-dependent oxidoreductase: 2 fimbrial-like protein: 2 YfjS/YafY family lipoprotein: 2 NADP(+)-dependent aldehyde reductase: 2 YlbE family protein: 2 type 1 fimbria chaperone FimC: 2 integrase: 2 phage lysis protein EssD: 2 esterase: 2 cytochrome bd-II oxidase subunit CbdX: 2 YceK/YidQ family lipoprotein: 2 cyclic di-GMP phosphodiesterase: 2 cold shock protein YdfK: 2 GnsA/GnsB family addiction module toxin: 2 class I fumarate hydratase: 2 4Fe-4S dicluster domain-containing protein: 2 goslim_prokaryote_largest_differences: - slim: GO:0005737 cytoplasm ncbi: 88 goa: 1461 goa_minus_ncbi: 1373 - slim: GO:0005886 plasma membrane ncbi: 82 goa: 1264 goa_minus_ncbi: 1182 - slim: GO:0050896 response to stimulus ncbi: 150 goa: 997 goa_minus_ncbi: 847 - slim: GO:0006810 transport ncbi: 374 goa: 717 goa_minus_ncbi: 343 - slim: GO:0005576 extracellular region ncbi: 39 goa: 371 goa_minus_ncbi: 332 - slim: GO:0016787 hydrolase activity ncbi: 307 goa: 632 goa_minus_ncbi: 325 - slim: GO:0005215 transporter activity ncbi: 277 goa: 578 goa_minus_ncbi: 301 - slim: GO:0003677 DNA binding ncbi: 162 goa: 448 goa_minus_ncbi: 286 - slim: GO:0016740 transferase activity ncbi: 375 goa: 620 goa_minus_ncbi: 245 - slim: GO:0042597 periplasmic space ncbi: 24 goa: 248 goa_minus_ncbi: 224 - slim: GO:1901135 carbohydrate derivative metabolic process ncbi: 140 goa: 361 goa_minus_ncbi: 221 - slim: GO:0006355 regulation of DNA-templated transcription ncbi: 165 goa: 376 goa_minus_ncbi: 211 - slim: GO:0005975 carbohydrate metabolic process ncbi: 130 goa: 316 goa_minus_ncbi: 186 - slim: GO:0016491 oxidoreductase activity ncbi: 239 goa: 404 goa_minus_ncbi: 165 - slim: GO:0065003 protein-containing complex assembly ncbi: 7 goa: 161 goa_minus_ncbi: 154 - slim: GO:0140110 transcription regulator activity ncbi: 103 goa: 253 goa_minus_ncbi: 150 - slim: GO:0016070 RNA metabolic process ncbi: 115 goa: 259 goa_minus_ncbi: 144 - slim: GO:0044283 small molecule biosynthetic process ncbi: 147 goa: 271 goa_minus_ncbi: 124 - slim: GO:0006091 generation of precursor metabolites and energy ncbi: 64 goa: 179 goa_minus_ncbi: 115 - slim: GO:0009279 cell outer membrane ncbi: 7 goa: 122 goa_minus_ncbi: 115 - slim: GO:0055086 nucleobase-containing small molecule metabolic process ncbi: 104 goa: 218 goa_minus_ncbi: 114 - slim: GO:0003723 RNA binding ncbi: 44 goa: 158 goa_minus_ncbi: 114 - slim: GO:0140096 catalytic activity, acting on a protein ncbi: 101 goa: 208 goa_minus_ncbi: 107 - slim: GO:0043226 organelle ncbi: 73 goa: 168 goa_minus_ncbi: 95 - slim: GO:0006629 lipid metabolic process ncbi: 71 goa: 166 goa_minus_ncbi: 95 - slim: GO:0006520 amino acid metabolic process ncbi: 132 goa: 224 goa_minus_ncbi: 92 - slim: GO:0140657 ATP-dependent activity ncbi: 117 goa: 208 goa_minus_ncbi: 91 - slim: GO:0140098 catalytic activity, acting on RNA ncbi: 86 goa: 161 goa_minus_ncbi: 75 - slim: GO:0016829 lyase activity ncbi: 111 goa: 184 goa_minus_ncbi: 73 - slim: GO:0140097 catalytic activity, acting on DNA ncbi: 75 goa: 143 goa_minus_ncbi: 68 level2_by_source: ncbi_terms_vs_goa: ArchId (CDD/SPARCLE) [C]: compared: 136 exact_pct: 62.5 other_more_specific_pct: 35.3 other_more_general_pct: 1.5 only_pct: 0.7 other_side_lacks_aspect: 4 ArchId (CDD/SPARCLE) [F]: compared: 355 exact_pct: 57.2 other_more_specific_pct: 13.0 other_more_general_pct: 7.0 only_pct: 22.8 other_side_lacks_aspect: 58 ArchId (CDD/SPARCLE) [P]: compared: 154 exact_pct: 71.4 other_more_specific_pct: 6.5 other_more_general_pct: 0.6 only_pct: 21.4 other_side_lacks_aspect: 31 BlastRule [C]: compared: 2 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 0 BlastRule [F]: compared: 25 exact_pct: 92.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 8.0 other_side_lacks_aspect: 0 BlastRule [P]: compared: 25 exact_pct: 96.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 4.0 other_side_lacks_aspect: 0 HMM:NF [C]: compared: 284 exact_pct: 96.8 other_more_specific_pct: 2.1 other_more_general_pct: 0.4 only_pct: 0.7 other_side_lacks_aspect: 0 HMM:NF [F]: compared: 1515 exact_pct: 93.6 other_more_specific_pct: 2.3 other_more_general_pct: 1.5 only_pct: 2.6 other_side_lacks_aspect: 11 HMM:NF [P]: compared: 1060 exact_pct: 90.2 other_more_specific_pct: 5.3 other_more_general_pct: 0.7 only_pct: 3.9 other_side_lacks_aspect: 12 HMM:TIGR [C]: compared: 242 exact_pct: 89.3 other_more_specific_pct: 3.7 other_more_general_pct: 5.8 only_pct: 1.2 other_side_lacks_aspect: 2 HMM:TIGR [F]: compared: 812 exact_pct: 91.3 other_more_specific_pct: 2.2 other_more_general_pct: 1.0 only_pct: 5.5 other_side_lacks_aspect: 3 HMM:TIGR [P]: compared: 664 exact_pct: 83.6 other_more_specific_pct: 8.0 other_more_general_pct: 1.1 only_pct: 7.4 other_side_lacks_aspect: 11 none [C]: compared: 2 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 0 none [F]: compared: 2 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 0 none [P]: compared: 1 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 0 goa_terms_vs_ncbi: ARBA [C]: compared: 154 exact_pct: 24.7 other_more_specific_pct: 13.0 other_more_general_pct: 41.6 only_pct: 20.8 other_side_lacks_aspect: 270 ARBA [F]: compared: 783 exact_pct: 43.2 other_more_specific_pct: 27.5 other_more_general_pct: 11.7 only_pct: 17.6 other_side_lacks_aspect: 338 ARBA [P]: compared: 331 exact_pct: 41.4 other_more_specific_pct: 17.5 other_more_general_pct: 18.1 only_pct: 23.0 other_side_lacks_aspect: 236 EC2GO [F]: compared: 957 exact_pct: 64.8 other_more_specific_pct: 2.5 other_more_general_pct: 21.4 only_pct: 11.3 other_side_lacks_aspect: 343 EXP [C]: compared: 72 exact_pct: 20.8 other_more_specific_pct: 8.3 other_more_general_pct: 50.0 only_pct: 20.8 other_side_lacks_aspect: 227 EXP [F]: compared: 415 exact_pct: 50.1 other_more_specific_pct: 2.4 other_more_general_pct: 24.3 only_pct: 23.1 other_side_lacks_aspect: 196 EXP [P]: compared: 154 exact_pct: 21.4 other_more_specific_pct: 3.2 other_more_general_pct: 27.3 only_pct: 48.1 other_side_lacks_aspect: 177 GO inter-ontology links [C]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 1 GO inter-ontology links [P]: compared: 162 exact_pct: 3.1 other_more_specific_pct: 0.0 other_more_general_pct: 45.1 only_pct: 51.9 other_side_lacks_aspect: 170 HDA [C]: compared: 53 exact_pct: 3.8 other_more_specific_pct: 11.3 other_more_general_pct: 22.6 only_pct: 62.3 other_side_lacks_aspect: 203 HTP [C]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 1 IBA [C]: compared: 484 exact_pct: 27.5 other_more_specific_pct: 5.4 other_more_general_pct: 55.6 only_pct: 11.6 other_side_lacks_aspect: 1574 IBA [F]: compared: 1785 exact_pct: 52.0 other_more_specific_pct: 5.4 other_more_general_pct: 18.2 only_pct: 24.4 other_side_lacks_aspect: 1062 IBA [P]: compared: 1344 exact_pct: 41.1 other_more_specific_pct: 3.9 other_more_general_pct: 23.8 only_pct: 31.2 other_side_lacks_aspect: 1030 IC [C]: compared: 6 exact_pct: 16.7 other_more_specific_pct: 50.0 other_more_general_pct: 16.7 only_pct: 16.7 other_side_lacks_aspect: 25 IC [F]: compared: 2 exact_pct: 50.0 other_more_specific_pct: 0.0 other_more_general_pct: 50.0 only_pct: 0.0 other_side_lacks_aspect: 5 IC [P]: compared: 10 exact_pct: 40.0 other_more_specific_pct: 0.0 other_more_general_pct: 30.0 only_pct: 30.0 other_side_lacks_aspect: 9 IDA [C]: compared: 705 exact_pct: 18.3 other_more_specific_pct: 7.1 other_more_general_pct: 47.4 only_pct: 27.2 other_side_lacks_aspect: 2071 IDA [F]: compared: 2832 exact_pct: 35.5 other_more_specific_pct: 4.4 other_more_general_pct: 13.9 only_pct: 46.2 other_side_lacks_aspect: 1524 IDA [P]: compared: 1120 exact_pct: 27.6 other_more_specific_pct: 4.3 other_more_general_pct: 22.9 only_pct: 45.2 other_side_lacks_aspect: 835 IEP [C]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 9 IEP [F]: compared: 7 exact_pct: 57.1 other_more_specific_pct: 0.0 other_more_general_pct: 14.3 only_pct: 28.6 other_side_lacks_aspect: 5 IEP [P]: compared: 214 exact_pct: 7.5 other_more_specific_pct: 3.7 other_more_general_pct: 6.5 only_pct: 82.2 other_side_lacks_aspect: 325 IGC [P]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 11 IGI [C]: compared: 2 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 4 IGI [F]: compared: 26 exact_pct: 53.8 other_more_specific_pct: 3.8 other_more_general_pct: 11.5 only_pct: 30.8 other_side_lacks_aspect: 16 IGI [P]: compared: 81 exact_pct: 35.8 other_more_specific_pct: 7.4 other_more_general_pct: 13.6 only_pct: 43.2 other_side_lacks_aspect: 98 IMP [C]: compared: 20 exact_pct: 35.0 other_more_specific_pct: 25.0 other_more_general_pct: 30.0 only_pct: 10.0 other_side_lacks_aspect: 56 IMP [F]: compared: 391 exact_pct: 44.2 other_more_specific_pct: 6.9 other_more_general_pct: 18.9 only_pct: 29.9 other_side_lacks_aspect: 288 IMP [P]: compared: 1324 exact_pct: 27.6 other_more_specific_pct: 3.5 other_more_general_pct: 24.6 only_pct: 44.2 other_side_lacks_aspect: 1231 IPI [C]: compared: 131 exact_pct: 29.8 other_more_specific_pct: 0.0 other_more_general_pct: 55.0 only_pct: 15.3 other_side_lacks_aspect: 329 IPI [F]: compared: 868 exact_pct: 2.3 other_more_specific_pct: 1.2 other_more_general_pct: 2.2 only_pct: 94.4 other_side_lacks_aspect: 666 IPI [P]: compared: 6 exact_pct: 33.3 other_more_specific_pct: 0.0 other_more_general_pct: 16.7 only_pct: 50.0 other_side_lacks_aspect: 8 ISA [C]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 1 ISA [F]: compared: 4 exact_pct: 100.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 2 ISA [P]: compared: 2 exact_pct: 50.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 50.0 other_side_lacks_aspect: 6 ISM [C]: compared: 77 exact_pct: 9.1 other_more_specific_pct: 6.5 other_more_general_pct: 74.0 only_pct: 10.4 other_side_lacks_aspect: 150 ISM [F]: compared: 64 exact_pct: 65.6 other_more_specific_pct: 0.0 other_more_general_pct: 4.7 only_pct: 29.7 other_side_lacks_aspect: 28 ISM [P]: compared: 7 exact_pct: 42.9 other_more_specific_pct: 14.3 other_more_general_pct: 14.3 only_pct: 28.6 other_side_lacks_aspect: 2 ISO [C]: compared: 2 exact_pct: 0.0 other_more_specific_pct: 50.0 other_more_general_pct: 50.0 only_pct: 0.0 other_side_lacks_aspect: 3 ISO [F]: compared: 6 exact_pct: 50.0 other_more_specific_pct: 16.7 other_more_general_pct: 33.3 only_pct: 0.0 other_side_lacks_aspect: 4 ISO [P]: compared: 5 exact_pct: 20.0 other_more_specific_pct: 20.0 other_more_general_pct: 60.0 only_pct: 0.0 other_side_lacks_aspect: 5 ISS [C]: compared: 8 exact_pct: 12.5 other_more_specific_pct: 0.0 other_more_general_pct: 25.0 only_pct: 62.5 other_side_lacks_aspect: 36 ISS [F]: compared: 62 exact_pct: 54.8 other_more_specific_pct: 1.6 other_more_general_pct: 8.1 only_pct: 35.5 other_side_lacks_aspect: 46 ISS [P]: compared: 21 exact_pct: 38.1 other_more_specific_pct: 0.0 other_more_general_pct: 19.0 only_pct: 42.9 other_side_lacks_aspect: 29 InterPro2GO [C]: compared: 573 exact_pct: 85.7 other_more_specific_pct: 8.4 other_more_general_pct: 3.7 only_pct: 2.3 other_side_lacks_aspect: 559 InterPro2GO [F]: compared: 3374 exact_pct: 64.4 other_more_specific_pct: 19.0 other_more_general_pct: 2.5 only_pct: 14.2 other_side_lacks_aspect: 1284 InterPro2GO [P]: compared: 1862 exact_pct: 78.7 other_more_specific_pct: 8.6 other_more_general_pct: 2.8 only_pct: 9.8 other_side_lacks_aspect: 878 NAS [C]: compared: 211 exact_pct: 28.9 other_more_specific_pct: 15.6 other_more_general_pct: 34.1 only_pct: 21.3 other_side_lacks_aspect: 440 NAS [F]: compared: 8 exact_pct: 25.0 other_more_specific_pct: 12.5 other_more_general_pct: 0.0 only_pct: 62.5 other_side_lacks_aspect: 5 NAS [P]: compared: 456 exact_pct: 20.8 other_more_specific_pct: 2.2 other_more_general_pct: 30.9 only_pct: 46.1 other_side_lacks_aspect: 421 ND [F]: compared: 0 exact_pct: 0.0 other_more_specific_pct: 0.0 other_more_general_pct: 0.0 only_pct: 0.0 other_side_lacks_aspect: 1 RCA [C]: compared: 98 exact_pct: 16.3 other_more_specific_pct: 4.1 other_more_general_pct: 64.3 only_pct: 15.3 other_side_lacks_aspect: 243 RCA [F]: compared: 27 exact_pct: 33.3 other_more_specific_pct: 11.1 other_more_general_pct: 22.2 only_pct: 33.3 other_side_lacks_aspect: 30 RCA [P]: compared: 18 exact_pct: 16.7 other_more_specific_pct: 16.7 other_more_general_pct: 16.7 only_pct: 50.0 other_side_lacks_aspect: 22 Rhea2GO [F]: compared: 983 exact_pct: 58.7 other_more_specific_pct: 1.8 other_more_general_pct: 23.8 only_pct: 15.7 other_side_lacks_aspect: 380 TAS [C]: compared: 11 exact_pct: 54.5 other_more_specific_pct: 0.0 other_more_general_pct: 27.3 only_pct: 18.2 other_side_lacks_aspect: 17 TAS [F]: compared: 9 exact_pct: 33.3 other_more_specific_pct: 22.2 other_more_general_pct: 33.3 only_pct: 11.1 other_side_lacks_aspect: 11 TAS [P]: compared: 25 exact_pct: 24.0 other_more_specific_pct: 0.0 other_more_general_pct: 28.0 only_pct: 48.0 other_side_lacks_aspect: 25 UniPathway2GO [P]: compared: 391 exact_pct: 51.7 other_more_specific_pct: 2.0 other_more_general_pct: 18.2 only_pct: 28.1 other_side_lacks_aspect: 213 UniProtKB-SubCell2GO [C]: compared: 534 exact_pct: 24.0 other_more_specific_pct: 10.1 other_more_general_pct: 49.8 only_pct: 16.1 other_side_lacks_aspect: 1644 UniRule [C]: compared: 146 exact_pct: 36.3 other_more_specific_pct: 7.5 other_more_general_pct: 38.4 only_pct: 17.8 other_side_lacks_aspect: 515 UniRule [F]: compared: 1262 exact_pct: 56.9 other_more_specific_pct: 5.2 other_more_general_pct: 8.0 only_pct: 29.9 other_side_lacks_aspect: 288 UniRule [P]: compared: 830 exact_pct: 56.0 other_more_specific_pct: 6.3 other_more_general_pct: 14.8 only_pct: 22.9 other_side_lacks_aspect: 321 level3_reviews: reviewed_loci: 83 ncbi_terms_by_review_class_pct: ALL: terms: 158 accepted: 62.7 modified: 13.9 unassessed: 7.0 over_annotated_general: 4.4 removed: 3.8 general_of_accepted: 3.8 over_annotated: 2.5 specific_of_accepted: 1.9 HMM:TIGR: terms: 87 accepted: 62.1 modified: 16.1 unassessed: 11.5 removed: 3.4 general_of_accepted: 3.4 over_annotated: 2.3 specific_of_accepted: 1.1 HMM:NF: terms: 65 accepted: 69.2 modified: 10.8 over_annotated_general: 10.8 removed: 3.1 general_of_accepted: 3.1 over_annotated: 3.1 ArchId (CDD/SPARCLE): terms: 6 specific_of_accepted: 33.3 removed: 16.7 modified: 16.7 unassessed: 16.7 general_of_accepted: 16.7 goa_terms_by_review_class_pct: ALL electronic: terms: 382 accepted: 67.0 modified: 19.9 over_annotated_general: 5.5 removed: 3.7 over_annotated: 2.9 undecided: 0.5 general_of_accepted: 0.3 specific_of_accepted: 0.3 IDA: terms: 353 accepted: 82.2 modified: 10.2 over_annotated: 4.2 removed: 2.0 undecided: 1.1 unassessed: 0.3 InterPro2GO: terms: 229 accepted: 62.4 modified: 24.0 over_annotated_general: 7.4 removed: 3.9 over_annotated: 2.2 IBA: terms: 195 accepted: 84.1 modified: 7.2 removed: 4.1 over_annotated: 2.6 undecided: 1.5 over_annotated_general: 0.5 IMP: terms: 128 accepted: 74.2 modified: 16.4 over_annotated: 4.7 removed: 2.3 undecided: 2.3 UniRule: terms: 119 accepted: 78.2 modified: 16.0 removed: 1.7 general_of_accepted: 0.8 undecided: 0.8 over_annotated_general: 0.8 over_annotated: 0.8 specific_of_accepted: 0.8 IPI: terms: 90 accepted: 43.3 removed: 42.2 modified: 13.3 undecided: 1.1 UniProtKB-SubCell2GO: terms: 65 accepted: 86.2 modified: 10.8 over_annotated_general: 3.1 NAS: terms: 54 accepted: 75.9 modified: 16.7 removed: 3.7 over_annotated: 1.9 unassessed: 1.9 EXP: terms: 50 accepted: 90.0 modified: 8.0 over_annotated: 2.0 ARBA: terms: 49 accepted: 69.4 modified: 18.4 over_annotated_general: 8.2 undecided: 2.0 over_annotated: 2.0 EC2GO: terms: 33 accepted: 87.9 over_annotated: 6.1 removed: 3.0 modified: 3.0 Rhea2GO: terms: 27 accepted: 92.6 over_annotated: 7.4 HDA: terms: 17 accepted: 76.5 over_annotated: 11.8 undecided: 11.8 UniPathway2GO: terms: 16 accepted: 93.8 undecided: 6.2 IEP: terms: 14 accepted: 57.1 over_annotated: 35.7 removed: 7.1 GO inter-ontology links: terms: 8 accepted: 50.0 removed: 37.5 over_annotated: 12.5 RCA: terms: 8 accepted: 100.0 ISM: terms: 7 accepted: 85.7 modified: 14.3 IGI: terms: 6 accepted: 50.0 over_annotated: 33.3 modified: 16.7 TAS: terms: 4 accepted: 75.0 specific_of_accepted: 25.0 ISS: terms: 2 accepted: 100.0 ISO: terms: 1 accepted: 100.0 IC: terms: 1 accepted: 100.0 goa_errors_shared_by_ncbi: over_annotated via ARBA: ncbi_no_terms_in_aspect: 2 ncbi_more_specific: 2 ncbi_avoided: 1 over_annotated via EC2GO: ncbi_same_term: 1 ncbi_no_terms_in_aspect: 1 over_annotated via EXP: ncbi_no_terms_in_aspect: 1 over_annotated via GO inter-ontology links: ncbi_avoided: 1 over_annotated via HDA: ncbi_no_terms_in_aspect: 2 over_annotated via IBA: ncbi_no_terms_in_aspect: 1 ncbi_avoided: 1 ncbi_more_general_only: 2 ncbi_same_term: 1 ncbi_more_specific: 1 over_annotated via IDA: ncbi_avoided: 4 ncbi_no_terms_in_aspect: 5 ncbi_more_general_only: 4 ncbi_same_term: 1 ncbi_more_specific: 1 over_annotated via IEP: ncbi_no_terms_in_aspect: 2 ncbi_avoided: 3 over_annotated via IGI: ncbi_no_terms_in_aspect: 2 over_annotated via IMP: ncbi_avoided: 4 ncbi_no_terms_in_aspect: 1 ncbi_more_general_only: 1 over_annotated via InterPro2GO: ncbi_no_terms_in_aspect: 5 ncbi_same_term: 10 ncbi_avoided: 3 ncbi_more_specific: 4 over_annotated via NAS: ncbi_avoided: 1 over_annotated via Rhea2GO: ncbi_no_terms_in_aspect: 1 ncbi_same_term: 1 over_annotated via UniProtKB-SubCell2GO: ncbi_no_terms_in_aspect: 1 ncbi_more_specific: 1 over_annotated via UniRule: ncbi_same_term: 1 ncbi_more_general_only: 1 removed via EC2GO: ncbi_same_term: 1 removed via GO inter-ontology links: ncbi_avoided: 2 ncbi_no_terms_in_aspect: 1 removed via IBA: ncbi_no_terms_in_aspect: 5 ncbi_avoided: 3 removed via IDA: ncbi_no_terms_in_aspect: 4 ncbi_avoided: 2 ncbi_same_term: 1 removed via IEP: ncbi_avoided: 1 removed via IMP: ncbi_avoided: 1 ncbi_no_terms_in_aspect: 2 removed via IPI: ncbi_no_terms_in_aspect: 13 ncbi_same_term: 1 ncbi_avoided: 24 removed via InterPro2GO: ncbi_same_term: 4 ncbi_avoided: 3 ncbi_no_terms_in_aspect: 2 removed via NAS: ncbi_more_specific: 1 ncbi_no_terms_in_aspect: 1 removed via UniRule: ncbi_no_terms_in_aspect: 1 ncbi_same_term: 1 core_function_coverage: BP goa_all: covered: 114 missed: 17 general_only: 4 BP goa_electronic: covered: 60 missed: 58 general_only: 17 BP ncbi: missed: 89 covered: 27 general_only: 19 BP ncbi_vs_goa_electronic: missed/covered: 29 missed/missed: 54 covered/covered: 24 general_only/general_only: 11 missed/general_only: 6 general_only/covered: 7 covered/missed: 3 general_only/missed: 1 MF goa_all: covered: 78 general_only: 3 missed: 20 MF goa_electronic: general_only: 6 missed: 46 covered: 49 MF ncbi: missed: 64 covered: 27 general_only: 10 MF ncbi_vs_goa_electronic: missed/general_only: 3 missed/missed: 46 missed/covered: 15 covered/covered: 27 general_only/covered: 7 general_only/general_only: 3 pipeline_variants: NCBI: genes_with_go: 2193 reviewed_terms: 158 review_correct_pct: 68.4 review_modified_pct: 13.9 review_over_annotated_other_pct: 2.5 review_too_general_pct: 4.4 review_unassessed_pct: 7.0 review_wrong_pct: 3.8 core_mf_covered_pct: 26.7 core_bp_covered_pct: 20.0 experimental_supported_pct: 70.9 experimental_recall_pct: 16.1 GOA InterPro2GO: genes_with_go: 2932 reviewed_terms: 229 review_correct_pct: 62.4 review_modified_pct: 24.0 review_over_annotated_other_pct: 2.2 review_too_general_pct: 7.4 review_wrong_pct: 3.9 core_mf_covered_pct: 30.7 core_bp_covered_pct: 25.2 experimental_supported_pct: 72.7 experimental_recall_pct: 21.4 GOA InterPro2GO + TreeGrafter + IBA: genes_with_go: 3328 reviewed_terms: 368 review_correct_pct: 70.1 review_modified_pct: 17.7 review_over_annotated_other_pct: 2.2 review_too_general_pct: 4.9 review_unassessed_pct: 0.8 review_wrong_pct: 4.3 core_mf_covered_pct: 46.5 core_bp_covered_pct: 43.0 experimental_supported_pct: 76.0 experimental_recall_pct: 47.0 GOA electronic without ARBA: genes_with_go: 3459 reviewed_terms: 361 review_correct_pct: 67.9 review_modified_pct: 19.9 review_over_annotated_other_pct: 2.8 review_too_general_pct: 5.3 review_unassessed_pct: 0.3 review_wrong_pct: 3.9 core_mf_covered_pct: 48.5 core_bp_covered_pct: 42.2 experimental_supported_pct: 72.1 experimental_recall_pct: 38.1 GOA electronic: genes_with_go: 3475 reviewed_terms: 382 review_correct_pct: 67.5 review_modified_pct: 19.9 review_over_annotated_other_pct: 2.9 review_too_general_pct: 5.5 review_unassessed_pct: 0.5 review_wrong_pct: 3.7 core_mf_covered_pct: 48.5 core_bp_covered_pct: 44.4 experimental_supported_pct: 74.2 experimental_recall_pct: 41.5 "NCBI \u222A GOA InterPro2GO + TreeGrafter + IBA": genes_with_go: 3427 reviewed_terms: 403 review_correct_pct: 69.2 review_modified_pct: 16.1 review_over_annotated_other_pct: 2.2 review_too_general_pct: 4.5 review_unassessed_pct: 3.5 review_wrong_pct: 4.5 core_mf_covered_pct: 47.5 core_bp_covered_pct: 46.7 experimental_supported_pct: 74.9 experimental_recall_pct: 48.1 level3_experimental: loci_with_experimental_go: 3328 terms_vs_experimental_pct: GOA electronic: terms: 11491 exact: 45.3 general_of_experimental: 28.9 not_supported: 22.3 specific_of_experimental: 3.5 GOA electronic [F]: terms: 5506 exact: 44.7 general_of_experimental: 28.3 not_supported: 23.8 specific_of_experimental: 3.3 NCBI: terms: 4128 exact: 45.7 not_supported: 26.4 general_of_experimental: 25.1 specific_of_experimental: 2.8 GOA electronic [P]: terms: 3455 exact: 38.6 not_supported: 31.1 general_of_experimental: 25.3 specific_of_experimental: 4.9 GOA electronic [C]: terms: 2530 exact: 55.7 general_of_experimental: 35.3 not_supported: 6.9 specific_of_experimental: 2.2 NCBI [F]: terms: 2097 exact: 52.6 not_supported: 28.2 general_of_experimental: 16.9 specific_of_experimental: 2.2 NCBI [P]: terms: 1498 exact: 41.5 not_supported: 29.9 general_of_experimental: 25.5 specific_of_experimental: 3.1 NCBI [C]: terms: 533 general_of_experimental: 56.5 exact: 30.4 not_supported: 9.2 specific_of_experimental: 3.9 experimental_terms_recalled: GOA electronic: covered: 5677 missed: 5927 general_only: 2074 covered_pct: 41.5 GOA electronic [C]: general_only: 704 missed: 1216 covered: 1497 covered_pct: 43.8 GOA electronic [F]: missed: 2051 covered: 2672 general_only: 635 covered_pct: 49.9 GOA electronic [P]: covered: 1508 missed: 2660 general_only: 735 covered_pct: 30.8 NCBI: missed: 10017 covered: 2206 general_only: 1455 covered_pct: 16.1 NCBI [C]: missed: 2833 general_only: 359 covered: 225 covered_pct: 6.6 NCBI [F]: missed: 3569 covered: 1257 general_only: 532 covered_pct: 23.5 NCBI [P]: missed: 3615 general_only: 564 covered: 724 covered_pct: 14.8