count: 35
rows:
- file: genes/ARATH/FLC/FLC-ai-review.yaml
  gene: FLC
  evidence_type: IEA
  reference: GO_REF:0000002
  original: GO:0045944 positive regulation of transcription by RNA polymerase II
  replacement: GO:0000122 negative regulation of transcription by RNA polymerase II
  flip: + -> -
- file: genes/ARATH/SHR/SHR-ai-review.yaml
  gene: SHR
  evidence_type: IMP
  reference: PMID:20739610
  original: GO:0045930 negative regulation of mitotic cell cycle
  replacement: GO:0045931 positive regulation of mitotic cell cycle
  flip: '- -> +'
- file: genes/ARATH/SVP/SVP-ai-review.yaml
  gene: SVP
  evidence_type: IEA
  reference: GO_REF:0000002
  original: GO:0045944 positive regulation of transcription by RNA polymerase II
  replacement: GO:0000122 negative regulation of transcription by RNA polymerase II
  flip: + -> -
- file: genes/DROME/AMPKalpha/AMPKalpha-ai-review.yaml
  gene: AMPKalpha
  evidence_type: IMP
  reference: PMID:36899949
  original: GO:0008284 positive regulation of cell population proliferation
  replacement: GO:0008285 negative regulation of cell population proliferation
  flip: + -> -
- file: genes/DROME/AMPKalpha/AMPKalpha-ai-review.yaml
  gene: AMPKalpha
  evidence_type: IMP
  reference: PMID:36899949
  original: GO:1904263 positive regulation of TORC1 signaling
  replacement: GO:1904262 negative regulation of TORC1 signaling
  flip: + -> -
- file: genes/DROME/Lkb1/Lkb1-ai-review.yaml
  gene: Lkb1
  evidence_type: IMP
  reference: PMID:36899949
  original: GO:0008284 positive regulation of cell population proliferation
  replacement: GO:0008285 negative regulation of cell population proliferation
  flip: + -> -
- file: genes/DROME/Lkb1/Lkb1-ai-review.yaml
  gene: Lkb1
  evidence_type: IMP
  reference: PMID:36899949
  original: GO:1904263 positive regulation of TORC1 signaling
  replacement: GO:1904262 negative regulation of TORC1 signaling
  flip: + -> -
- file: genes/DROME/Mo25/Mo25-ai-review.yaml
  gene: Mo25
  evidence_type: TAS
  reference: PMID:36899949
  original: GO:1904263 positive regulation of TORC1 signaling
  replacement: GO:1904262 negative regulation of TORC1 signaling
  flip: + -> -
- file: genes/DROME/Stlk/Stlk-ai-review.yaml
  gene: Stlk
  evidence_type: TAS
  reference: PMID:36899949
  original: GO:1904263 positive regulation of TORC1 signaling
  replacement: GO:1904262 negative regulation of TORC1 signaling
  flip: + -> -
- file: genes/human/ABCC8/ABCC8-ai-review.yaml
  gene: ABCC8
  evidence_type: IEA
  reference: GO_REF:0000107
  original: GO:1905604 negative regulation of blood-brain barrier permeability
  replacement: GO:1905605 positive regulation of blood-brain barrier permeability
  flip: '- -> +'
- file: genes/human/AGT/AGT-ai-review.yaml
  gene: AGT
  evidence_type: IGI
  reference: PMID:17416596
  original: GO:1903598 positive regulation of gap junction assembly
  replacement: GO:1903597 negative regulation of gap junction assembly
  flip: + -> -
- file: genes/human/ANLN/ANLN-ai-review.yaml
  gene: ANLN
  evidence_type: IMP
  reference: PMID:23870127
  original: GO:1904172 positive regulation of bleb assembly
  replacement: GO:1904171 negative regulation of bleb assembly
  flip: + -> -
- file: genes/human/ATP13A2/ATP13A2-ai-review.yaml
  gene: ATP13A2
  evidence_type: TAS
  reference: PMID:22885599
  original: GO:1905166 negative regulation of lysosomal protein catabolic process
  replacement: GO:1905167 positive regulation of lysosomal protein catabolic process
  flip: '- -> +'
- file: genes/human/CBL/CBL-ai-review.yaml
  gene: CBL
  evidence_type: IMP
  reference: PMID:17003487
  original: GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
  replacement: GO:0051898 negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
  flip: + -> -
- file: genes/human/CD47/CD47-ai-review.yaml
  gene: CD47
  evidence_type: IBA
  reference: GO_REF:0000033
  original: GO:0050766 positive regulation of phagocytosis
  replacement: GO:0050765 negative regulation of phagocytosis
  flip: + -> -
- file: genes/human/CD47/CD47-ai-review.yaml
  gene: CD47
  evidence_type: IEA
  reference: GO_REF:0000002
  original: GO:0050766 positive regulation of phagocytosis
  replacement: GO:0050765 negative regulation of phagocytosis
  flip: + -> -
- file: genes/human/CDKN1B/CDKN1B-ai-review.yaml
  gene: CDKN1B
  evidence_type: TAS
  reference: Reactome:R-HSA-69656
  original: GO:0045740 positive regulation of DNA replication
  replacement: GO:0008156 negative regulation of DNA replication
  flip: + -> -
- file: genes/human/CIB2/CIB2-ai-review.yaml
  gene: CIB2
  evidence_type: IDA
  reference: PMID:23023331
  original: GO:0007204 positive regulation of cytosolic calcium ion concentration
  replacement: GO:0051481 negative regulation of cytosolic calcium ion concentration
  flip: + -> -
- file: genes/human/CIB2/CIB2-ai-review.yaml
  gene: CIB2
  evidence_type: IDA
  reference: PMID:26173970
  original: GO:0007204 positive regulation of cytosolic calcium ion concentration
  replacement: GO:0051481 negative regulation of cytosolic calcium ion concentration
  flip: + -> -
- file: genes/human/CLYBL/CLYBL-ai-review.yaml
  gene: CLYBL
  evidence_type: IEA
  reference: GO_REF:0000107
  original: GO:0106121 positive regulation of cobalamin catabolic process
  replacement: GO:0106122 negative regulation of cobalamin catabolic process
  flip: + -> -
- file: genes/human/CLYBL/CLYBL-ai-review.yaml
  gene: CLYBL
  evidence_type: IDA
  reference: PMID:29056341
  original: GO:0106121 positive regulation of cobalamin catabolic process
  replacement: GO:0106122 negative regulation of cobalamin catabolic process
  flip: + -> -
- file: genes/human/FGFR4/FGFR4-ai-review.yaml
  gene: FGFR4
  evidence_type: IMP
  reference: PMID:19085950
  original: GO:0010628 positive regulation of gene expression
  replacement: GO:0010629 negative regulation of gene expression
  flip: + -> -
- file: genes/human/GNAI2/GNAI2-ai-review.yaml
  gene: GNAI2
  evidence_type: IEA
  reference: GO_REF:0000107
  original: GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway
  replacement: GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
  flip: + -> -
- file: genes/human/HDAC6/HDAC6-ai-review.yaml
  gene: HDAC6
  evidence_type: IDA
  reference: PMID:31857589
  original: GO:1905336 negative regulation of aggrephagy
  replacement: GO:1905335 positive regulation of aggrephagy
  flip: '- -> +'
- file: genes/human/LRP5/LRP5-ai-review.yaml
  gene: LRP5
  evidence_type: IMP
  reference: PMID:17680723
  original: GO:0045600 positive regulation of fat cell differentiation
  replacement: GO:0045599 negative regulation of fat cell differentiation
  flip: + -> -
- file: genes/human/LRP5/LRP5-ai-review.yaml
  gene: LRP5
  evidence_type: IMP
  reference: PMID:17680723
  original: GO:0045668 negative regulation of osteoblast differentiation
  replacement: GO:0045669 positive regulation of osteoblast differentiation
  flip: '- -> +'
- file: genes/human/MCL1/MCL1-ai-review.yaml
  gene: MCL1
  evidence_type: IEA
  reference: GO_REF:0000107
  original: GO:1903378 positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
  replacement: GO:1903377 negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
  flip: + -> -
- file: genes/human/MCL1/MCL1-ai-review.yaml
  gene: MCL1
  evidence_type: IGI
  reference: PMID:23858059
  original: GO:1903378 positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
  replacement: GO:1903377 negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
  flip: + -> -
- file: genes/human/NLRP3/NLRP3-ai-review.yaml
  gene: NLRP3
  evidence_type: IMP
  reference: PMID:12483741
  original: GO:0032691 negative regulation of interleukin-1 beta production
  replacement: GO:0032731 positive regulation of interleukin-1 beta production
  flip: '- -> +'
- file: genes/human/NLRP3/NLRP3-ai-review.yaml
  gene: NLRP3
  evidence_type: IMP
  reference: PMID:12483741
  original: GO:0050728 negative regulation of inflammatory response
  replacement: GO:0050729 positive regulation of inflammatory response
  flip: '- -> +'
- file: genes/human/NLRP3/NLRP3-ai-review.yaml
  gene: NLRP3
  evidence_type: IMP
  reference: PMID:16531551
  original: GO:0050728 negative regulation of inflammatory response
  replacement: GO:0050729 positive regulation of inflammatory response
  flip: '- -> +'
- file: genes/human/NLRP3/NLRP3-ai-review.yaml
  gene: NLRP3
  evidence_type: IMP
  reference: PMID:17178985
  original: GO:0050728 negative regulation of inflammatory response
  replacement: GO:0050729 positive regulation of inflammatory response
  flip: '- -> +'
- file: genes/human/PINK1/PINK1-ai-review.yaml
  gene: PINK1
  evidence_type: IMP
  reference: PMID:19880420
  original: GO:0090200 positive regulation of release of cytochrome c from mitochondria
  replacement: GO:0090201 negative regulation of release of cytochrome c from mitochondria
  flip: + -> -
- file: genes/worm/ced-9/ced-9-ai-review.yaml
  gene: ced-9
  evidence_type: EXP
  reference: PMID:10846174
  original: GO:0043065 positive regulation of apoptotic process
  replacement: GO:0043066 negative regulation of apoptotic process
  flip: + -> -
- file: genes/worm/daf-18/daf-18-ai-review.yaml
  gene: daf-18
  evidence_type: NAS
  reference: PMID:20207731
  original: GO:0046628 positive regulation of insulin receptor signaling pathway
  replacement: GO:0046627 negative regulation of insulin receptor signaling pathway
  flip: + -> -
