{
  "method": "Biopython 1.85 global BLOSUM62, gap open -10, extension -0.5",
  "inputs": [
    {
      "path": "genes/human/CC2D2A/CC2D2A-uniprot.txt",
      "accession": "Q9P2K1",
      "length": 1620,
      "sequence_sha256": "35a0ba0fedc40f395b1427f0ec641a5cdc075ee1a489a20b56f8dc13dceb63e7"
    },
    {
      "path": "genes/HORSE/CC2D2A/CC2D2A-uniprot.txt",
      "accession": "A0A5F5PJ44",
      "length": 1480,
      "sequence_sha256": "13294578bb866c46d5de006dbc6ae59922c1dc2143de886f213e33dfc1bbeef2"
    }
  ],
  "score": 6882.5,
  "paired_residues": 1478,
  "identical_residues": 1335,
  "identity_among_paired": 0.9032476319350473,
  "coverage_left": 0.9123456790123456,
  "coverage_right": 0.9986486486486487,
  "alignment": "target            0 MNPREEKVKIITEEFIENDEDADMGRQNKNSKVRRQPRKKQPPTAVPKEMVSEKSHLGNP\n                  0 -------------------------------------------------|||||||||..\nquery             0 -------------------------------------------------MVSEKSHLGDQ\n\ntarget           60 QEPVQEEPK--TRLLSMTVRRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESA\n                 60 |||..|.|.--.|.|||..||||||||||||.|||||||||||.||||||||||||||||\nquery            11 QEPGHEDPNADARPLSMPTRRGPRSLPPIPSASRTGFAEFSMRERMREKLQAARSKAESA\n\ntarget          118 LLQEIPTPRPRRLRSPSKKELETEFGTEPGKEVERTQQEVDSQSYSRVKFHDSARKIKPK\n                120 |||||||||||||||||.||||||||||--------------------------------\nquery            71 LLQEIPTPRPRRLRSPSEKELETEFGTE--------------------------------\n\ntarget          178 PQVPPGFPSAEEAYNFFTFNFDPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKE\n                180 ------------------------------------------------------------\nquery            99 ------------------------------------------------------------\n\ntarget          238 MDEEELLNGDDAEDFLLGLDHVADDFVAVRPADYESIHDRLQMEREMLFIPSRQTVPTYK\n                240 -||||||...||.|||||||..|.|.||||||||||.|.|||.|.|.||||||.||||||\nquery            99 -DEEELLDDKDAVDFLLGLDRGAEDIVAVRPADYESVHIRLQKEKELLFIPSRRTVPTYK\n\ntarget          298 KLPENVQPRFLEDEGLYTGVRPEVARTNQNIMENRLLMQDPERRWFGDDGRILALPNPIK\n                300 |||||||||||||||||.|.|.||.||||||||||||||.|.||||||||||||||||||\nquery           158 KLPENVQPRFLEDEGLYIGARLEVPRTNQNIMENRLLMQEPGRRWFGDDGRILALPNPIK\n\ntarget          358 PFPSRPPVLTQEQSIKAELETLYKKAVKYVHSSQHVIRSGDPPGNFQLDIDISGLIFTHH\n                360 ||||||.||.|||.|||||||||||||||||.|||.|.||||||||||||||||||||||\nquery           218 PFPSRPLVLSQEQDIKAELETLYKKAVKYVHRSQHMIGSGDPPGNFQLDIDISGLIFTHH\n\ntarget          418 PCFSREHVLAAKLAQLYDQYLARHQRNKAKFLTDKLQALRNAVQTGLDPEKPHQSLDTIQ\n                420 |||||||||||||||||||||||.||||||||||||||||||||..|.|.|...||||..\nquery           278 PCFSREHVLAAKLAQLYDQYLARRQRNKAKFLTDKLQALRNAVQMSLNPAKTPKSLDTTR\n\ntarget          478 KTINEYKSEIRQTRKFRDAEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEK\n                480 ..|||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||\nquery           338 RAINEYKSEIRQTRKLRDIEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEK\n\ntarget          538 ADQKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQRAKKKKRKQA\n                540 .||||||||||||.|||||||||||.|||.|.|.|||...||||||.|.||.||||.||.\nquery           398 VDQKADEEAYEAEVQAEISELLEEHREEYEQRMDEYRSAHQQWKAWKKAQRTKKKKKKQG\n\ntarget          598 AEEHPGDEIAEPYPEEDLVKPSPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAG\n                600 .||||.||..||||.||.|||.|||||..||||||||||||||||||.||.|||||||||\nquery           458 VEEHPDDEMEEPYPGEDPVKPVPPEPTNQAVIEQEVRERAAQSRRRPGEPMLVPELSLAG\n\ntarget          658 SVTPNDQCPRAEVSRREDVKKRSVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIV\n                660 ||||||||||.||.||||||.||||||||||.||||||.|||||||||||||||||||||\nquery           518 SVTPNDQCPRVEVLRREDVKRRSVYLKVLFNDKEVSRTNSRPLGADFRVHFGQIFNLQIV\n\ntarget          718 NWPESLTLQVYETVGHSSPTLLAEVFLPIPETTVVTGRAPTEEVEFSSNQHVTLDHEGVG\n                720 |||||||||||||||||..|||||||||||||||||||||.|||||||||||||||||||\nquery           578 NWPESLTLQVYETVGHSGTTLLAEVFLPIPETTVVTGRAPLEEVEFSSNQHVTLDHEGVG\n\ntarget          778 SGVPFSFEADGSNQLTLMTSGKVSHSVAWAIGENGIPLIPPLSQQNIGFRSALKKADAIS\n                780 ||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||\nquery           638 SGVPFSFEADGSNQLTLMTSGKVSNSVSWAIGENGIPLIPPLSQQNIGFRSALKRADAIS\n\ntarget          838 SIGTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLISVATSGESYVPDFFRLEQLQQEFN\n                840 ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||\nquery           698 SIGTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLILVATSGESYVPDFFRLEQLQQEFN\n\ntarget          898 FVSDQELNRSKRFRLLHLRSQEVPEFRNYKQVPVYDREIMEKVFQDYEKRLRDRNVIETK\n                900 ||||.|||||||||||.||||||||||||||.||||||||||||||||||||||||||||\nquery           758 FVSDEELNRSKRFRLLRLRSQEVPEFRNYKQIPVYDREIMEKVFQDYEKRLRDRNVIETK\n\ntarget          958 EHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQK\n                960 .||||||||||||||||||||||||||||..|||||.||||||||||||||.||||||||\nquery           818 DHIDTHRAIVAKYLQQVRESVINRFLIAKHHFLLADLIVEEEVPNISILGLRLFKLAEQK\n\ntarget         1018 RPLRPRRKGRKKVTAQNLSDGDIKLLVNIVRAYDIPVRKPAVSKFQQPSRSSRMFSEKHA\n               1020 |||||||||||||||||||||||||||||.||||||||||..||||||.||||.||||.|\nquery           878 RPLRPRRKGRKKVTAQNLSDGDIKLLVNIIRAYDIPVRKPITSKFQQPPRSSRTFSEKQA\n\ntarget         1078 ASPSTYSPTHNADYPLGQVLVRPFVEVSFQRTVCHTTTAEGPNPSWNEELELPFRAPNGD\n               1080 |||.|.||||.|||||.|||||||||||||||.||||||.|||||||||||||||||||.\nquery           938 ASPTTHSPTHSADYPLSQVLVRPFVEVSFQRTICHTTTADGPNPSWNEELELPFRAPNGN\n\ntarget         1138 YSTASLQSVKDVVFINIFDEVLHDVLEDDRERGSGIHTRIERHWLGCVKMPFSTIYFQAR\n               1140 |||.|||||||.||||||||||.|||||||||.||||||||||||||||.|||||||||.\nquery           998 YSTTSLQSVKDDVFINIFDEVLYDVLEDDRERASGIHTRIERHWLGCVKIPFSTIYFQAK\n\ntarget         1198 IDGTFKIDIPPVLLGYSKERNMILERGFDSVRSLSEGSYITLFITIEPQLVPGESIREKF\n               1200 ||||||||.||||||||||.....|||||.|||||||||||||||.|||||||||.||||\nquery          1058 IDGTFKIDTPPVLLGYSKEQSVVAERGFDPVRSLSEGSYITLFITMEPQLVPGESVREKF\n\ntarget         1258 ESQEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNVYP\n               1260 .||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||\nquery          1118 DSQEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNPPQELLNAYP\n\ntarget         1318 NNLQATAELVARYVSLIPFLPDTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLS\n               1320 ||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||\nquery          1178 NNPQATAELVARYVSLIPFLPDTVSFAGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLS\n\ntarget         1378 LGKKAWLLMGNAIPEGPTAYVLTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDN\n               1380 |||||||.|||||||||||||||.||..||||||||||||||||||||||.|||||||||\nquery          1238 LGKKAWLMMGNAIPEGPTAYVLTREQSHYLIWNPCSGHFYGQFDTFCPLKSVGCLIGPDN\n\ntarget         1438 IWFNIQRYESPLRINFDVTRPKLWKSFFSRSLPYPGLSSVQPEELIYQRSDKAAAAELQD\n               1440 |||||||..||||||||.|.|||||||||||||||||||||||||||||.||||||||||\nquery          1298 IWFNIQRHDSPLRINFDITKPKLWKSFFSRSLPYPGLSSVQPEELIYQRTDKAAAAELQD\n\ntarget         1498 RIEKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYR\n               1500 |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||\nquery          1358 RIEKILKEKIMDWRPRHLTRWNRYCTSTLRHFLPLLERSQGEDVEDDHRAELLKQLGDYR\n\ntarget         1558 FSGFPLHMPYSEVKPLIDAVYSTGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIR\n               1560 ||||||||||||.||||.||||||||||||||||||||||||||||||||||||||||||\nquery          1418 FSGFPLHMPYSELKPLIEAVYSTGVHNIDVPNVEFALAVYIHPYPKNVLSVWIYVASLIR\n\ntarget         1618 NR 1620\n               1620 || 1622\nquery          1478 NR 1480\n",
  "limitations": "Pairwise similarity does not establish reciprocal orthology, full-length gene-model correctness or functional conservation."
}