{
  "method": "Biopython 1.85 global BLOSUM62, gap open -10, extension -0.5",
  "inputs": [
    {
      "path": "genes/human/SHLD2/SHLD2-uniprot.txt",
      "accession": "Q86V20",
      "length": 835,
      "sequence_sha256": "116d8bb045a569c19ebf5b35f4663c31171baddfe83932e0b6cc5515416375ad"
    },
    {
      "path": "genes/HORSE/SHLD2/SHLD2-uniprot.txt",
      "accession": "A0A9L0RGD6",
      "length": 883,
      "sequence_sha256": "23a8bbd5f9a69c949ff70deeaae91430af52e92bb435042251f70404110d2f95"
    }
  ],
  "score": 2657.5,
  "paired_residues": 792,
  "identical_residues": 556,
  "identity_among_paired": 0.702020202020202,
  "coverage_left": 0.948502994011976,
  "coverage_right": 0.8969422423556059,
  "alignment": "target            0 MSGGSQVHIFWGAPIAPLKITVSEDTASLMSVADPWKKIQLLYSQHSLYLKDEK-QHKNL\n                  0 |||||||||||||||.|||.|||....||.|..||||||||||.||||.|||.|-.||||\nquery             0 MSGGSQVHIFWGAPIGPLKMTVSQEPTSLVSTTDPWKKIQLLYNQHSLHLKDDKCKHKNL\n\ntarget           59 ENYKVPESIGSPD-LSGHFLANCMNRHVHVKDDFVRSVSETQNIESQKIHSSRLSDITSS\n                 60 |...|....|..|-|.||||||..||..|||||||...|||....|.||.....|.|..|\nquery            60 EDCQVLDAAGPSDLLNGHFLANSVNRSAHVKDDFVHCISETETTKSHKIPPLEMSGIPNS\n\ntarget          118 NMQICGFKSTVPHFTEEEKYQKLLSEN-KIRDEQPKHQPDICGKNFNTNLFQLGHKCAAV\n                120 ..||||||..|.|.|||||.|.|.|||-||.|||.|.|..|||.||..|...|..||||.\nquery           120 DVQICGFKGRVQHLTEEEKCQQLFSENKKIADEQHKDQSNICGQNFPKNSLHLDPKCAAI\n\ntarget          177 LDLVCSTEKINIGPEVVQRECVPTEYHEIQNQCLGLFSSNAVDKSRSEAAVRKVSDLKIS\n                180 |||||.||.|||||.......|||...|.|.|.|..|.|..||..|||.|.||.|.|.||\nquery           180 LDLVCGTEQINIGPGAAETKRVPTGHRERQTQRLEFFPSSTVDEPRSERAARKDSALNIS\n\ntarget          237 TDTEFLSIITSSQVAFLAQKKDKRRSPVNKGNVNMETEPKASYGEIRIPEENSIQ-LDGF\n                240 |||||||..||||||||||.|.|....||||.||||.|||||.||.|..|.|.|.-.|||\nquery           240 TDTEFLSVMTSSQVAFLAQRKYKGQNSVNKGIVNMEIEPKASHGEMRKREDNLIKPNDGF\n\ntarget          296 TEAYESGQNQAYSLELFSPVCPKTENSRIHINSDKGLEEHTGSQELFSSEDELPPNEIRI\n                300 .|..||||..||||||||||||.||.|.|.|||||||||.|||||||..|..|.|.||.|\nquery           300 AEGSESGQTEAYSLELFSPVCPETESSNIRINSDKGLEENTGSQELFTFENKLLPDEICI\n\ntarget          356 ELCSSGILCSQLNTFHKSAIKRSCTSEDKVGQSEALSRVLQVAKKMKLISNGGDSAVEMD\n                360 |.|||||||||.|||.||..||..|||||.|.|.|||.|||..|||||.||..|..|||.\nquery           360 ESCSSGILCSQGNTFLKSSGKRNRTSEDKLGHSKALSKVLQESKKMKLVSNARDPPVEMG\n\ntarget          416 RRNVSEFKSIKKTSLIKNCDSKSQKYNCLVMVLSPCHVKEINIKFGPNSGSKVPLATVTV\n                420 .||||.|...|||||||||.||||||||||||||||||||||||.||||||||||||.||\nquery           420 QRNVSKFHGVKKTSLIKNCGSKSQKYNCLVMVLSPCHVKEINIKSGPNSGSKVPLATITV\n\ntarget          476 IDQSETKKKVFLWRTAAFWAFTVFLGDIILLTDVVIHEDQWIGETVLQSTFSSQLLNLGS\n                480 |||||.||||||||||||||||||||||.|||||.||.|.|.||.||||||.||||||||\nquery           480 IDQSEVKKKVFLWRTAAFWAFTVFLGDIVLLTDVTIHDDHWVGERVLQSTFTSQLLNLGS\n\ntarget          536 YSSIQPEEYSSVVSEVVLQDLLAYVSSKHSYLRDLPPRQPQRVNSIDFVELEHLQPDVLV\n                540 |||.|||||||.||.|||||||||||||||||.|||.|.||..|||.||||..|.||.||\nquery           540 YSSVQPEEYSSMVSDVVLQDLLAYVSSKHSYLKDLPQRRPQKMNSIEFVELACLRPDILV\n\ntarget          596 HAVLRVVDFTILTEAVYSYRGQKQKKVMLTVEQAQDQHYALVLWGPGAAWYPQLQRKK--\n                600 |||.||||.|.|||||||||||||.||||||||.|.|||.||||||||||||||||||--\nquery           600 HAVVRVVDITVLTEAVYSYRGQKQRKVMLTVEQTQGQHYVLVLWGPGAAWYPQLQRKKDY\n\ntarget          654 ------------------------------------------------------------\n                660 ------------------------------------------------------------\nquery           660 IWEFKYLFVQRNCVLENLELHTTPWSSCESLFDDDIRAVTFKAKFQKSTSSFVKMSDLAV\n\ntarget          654 -------GVVLIKAQISELAFPITASQKIALNAHSSLKSIFSSLPNIVYTGCAKCGLELE\n                720 -------||.||||||.||.||.||.|||||||.||||||||||||||||||||||||||\nquery           720 HLEDKCSGVILIKAQILELVFPTTAAQKIALNARSSLKSIFSSLPNIVYTGCAKCGLELE\n\ntarget          707 TDENRIYKQCFSCLPFTMKKIYY-----------RPALMTAIDG--RHDVCIRVESKLIE\n                780 |||||||.|||||||||||||||-----------|..|.....|--|...|......|--\nquery           780 TDENRIYRQCFSCLPFTMKKIYYSAPRRGHLWHGRRRLAPRLAGGRRGPLCGEGAEPL--\n\ntarget          754 KILLNISADCLNRVIVPSSEITYGMVVADLFHSLLAVSAEPCVLKIQSLFVLDENSYPLQ\n                840 ----------------|............|...||....||.-----------....|--\nquery           838 ----------------PAGRKQLPPATGFLAPRLLPRQCEPA-----------SQAFP--\n\ntarget          814 QDFSLLDFYPDIVKHGANARL----- 835\n                900 ------------...|.|.|.----- 926\nquery           869 ------------ETRGKNCRRFEDNP 883\n",
  "limitations": "Pairwise similarity does not establish reciprocal orthology, full-length gene-model correctness or functional conservation."
}