Example Repositories Using AI4Curation Setup
Ontology Repositories
Mondo Disease Ontology
Repository: monarch-initiative/mondo
Key Files to Explore: - ai-agent.yml - GitHub Actions workflow configuration - CLAUDE.md - Agent instructions - .config/goose/config.yaml - Goose configuration
Agent Platform: Goose (via dragon-ai-agent)
Agent Activity: Search for @dragon-ai-agent mentions and PRs
Cell Ontology (CL)
Repository: obophenotype/cell-ontology
Key Files to Explore: - CLAUDE.md - Agent instructions
Agent Platform: Goose (via dragon-ai-agent)
Agent Activity: Search for @dragon-ai-agent mentions and PRs
Uberon Anatomy Ontology
Repository: obophenotype/uberon
Key Files to Explore: - PR #3580 - GitHub Copilot integration
Agent Platform: GitHub Copilot, Goose
Agent Activity: Search for @dragon-ai-agent mentions and PRs
EFO (Experimental Factor Ontology)
Repository: EBISPOT/efo
Agent Platform: GitHub Copilot
Agent Activity: Search for Copilot activity
Documentation Repositories
AI4Curators Documentation
Repository: ai4curation/aidocs (this repository)
Key Files to Explore:
- .github/workflows/ - GitHub Actions for AI agent integration
- CLAUDE.md - Repository-specific instructions
Agent Platform: Claude Code, Goose
Agent Activity: Search for @dragon-ai-agent mentions and PRs