p38 stress-activated MAPK cascade module

A taxon-neutral decomposition of the p38 mitogen-activated protein kinase cascade, the stress- and cytokine-activated concrete realization of the generic three-tier MAP kinase relay (MODULE:mapk_relay). Environmental stresses (UV, osmotic and oxidative stress) and inflammatory cytokines (TNF, IL-1) signal through upstream MAP3Ks (ASK1/MAP3K5, TAK1/MAP3K7, MLK family) to the dual-specificity MAP2Ks MKK3 (MAP2K3) and MKK6 (MAP2K6), which dually phosphorylate the p38 MAPKs (p38 alpha/beta/gamma/delta) on their TGY activation-loop motif. Active p38 phosphorylates substrate kinases (MK2/MAPKAPK2) and transcription factors (ATF2, MEF2), driving stress-response and inflammatory gene programs. The RAF-analogous kinase relay - MAP3K -> MKK3/6 -> p38 - is declared as an inner bundle that `conforms_to` mapk_relay, while the stress/cytokine input and the p38 effector output and DUSP-mediated feedback are this cascade's free extensions around the conforming core. Grounded in GO:0038066 (p38MAPK cascade) / GO:0051403 (stress-activated MAPK cascade).

MODULE:p38_cascadeDRAFTSignaling Pathwaymodules/p38_cascade.yaml
p38MAPK cascadeGO:0038066 stress-activated MAPK cascadeGO:0051403
GO:0038066
p38MAPK cascade
The module is grounded in the GO biological process term for the p38MAPK cascade, the stress-activated branch of the MAPK cascade family.
GO:0051403
stress-activated MAPK cascade
The p38 cascade is a stress-activated MAPK cascade, activated by environmental stress and inflammatory cytokines rather than mitogens.
GO:0000165
MAPK cascade
The relay tier conforms to the generic three-tier MAPK cascade motif (MODULE:mapk_relay).
PANTHER:PTN000684847
PAINT p38 MAPK activity ancestral node
Local PAINT IBD seed rows place the curated ASK1/p38-pathway support set in PTHR11584 node PTN000684847 with p38 MAP kinase activity.
PANTHER:PTN000622075
PAINT MAPK kinase-activity node
Local PAINT IBD seed rows place the curated p38 alpha exemplar in a MAPK family node with protein kinase activity and intracellular signal transduction terms.

This module is the concrete p38 (stress-activated) branch of the generic three-tier MAP kinase relay (MODULE:mapk_relay): the inner `p38_relay` node bundles the MAP3K -> MKK3/6 -> p38 tiers and declares conformance to that motif, while the stress/cytokine input step and the downstream p38-output and DUSP-feedback steps are this cascade's free extensions around the conforming core. Representative UniProt members (ASK1 Q99683, MKK6 P52564, MKK3 P46734, p38 alpha Q16539) were verified against UniProt.

8Nodes
7Parts
0Variant Sets
0Variants
6Annotons
5Connections

Derived QC

Recommended-field compliance

100.0% recommended fields populated

All recommended fields populated.

Module deep research

✗ none found

No MODULE:p38_cascade deep-research report alongside the module YAML.

Leaf nodes lacking representative members

3 leaf node(s) with no concrete protein grounding:

Template conformance

every declared conforms_to bundle matches its template motif.

Gene-review completeness (1/4 grounded genes reviewed)

1 complete review(s) · 1 with deep research · 3 missing review · 0 reviewed but lacking deep research

Gene Review Complete Deep research
MAP3K5 Q99683
MKK3 (MAP2K3) P46734
MKK6 (MAP2K6) P52564
p38 alpha (MAPK14) Q16539

Details

Context
cytosolGO:0005829 nucleusGO:0005634
p38 (stress-activated) MAPK cascadeSignaling Pathwayp38_cascade
p38MAPK cascadeGO:0038066 stress-activated MAPK cascadeGO:0051403
Context
cytosolGO:0005829 nucleusGO:0005634

Connections

Stress/cytokine stimuli activate the MAP3K tier of the p38 relay.
p38_relay -> p38_output Provides Input For
Active p38 phosphorylates nuclear and cytoplasmic substrates.
p38_negative_regulation -> p38_mapk Negatively Regulates
DUSP/MKP phosphatases dephosphorylate p38.
Part 1: stress and cytokine input
Stress/cytokine activation of the p38 MAP3K tierRegulatory Stepstress_input

Environmental stress (UV, osmotic, oxidative) and inflammatory cytokines (TNF, IL-1), relayed through MAP4Ks, Rho-family GTPases, and adaptor MAP3Ks, converge to activate the MAP3K tier of the cascade.

Annotons

stress-activated MAP3K input
stress_activation
Participant: Any Participant

Processes

stress-activated MAPK cascadeGO:0051403

Couples stress and cytokine stimuli to the p38 relay.

Part 2: p38 kinase relay (conforms to mapk_relay)
p38 kinase relay (MAP3K -> MKK3/6 -> p38)Reactionp38_relay

The three-tier kinase relay of the p38 cascade: a stress-activated MAP3K (ASK1/TAK1/MLK) phosphorylates MKK3/MKK6 (MAP2K), which dually phosphorylates p38 (MAPK) on its TGY activation-loop motif.

Connections

p38_map3k -> p38_map2k Causes
The MAP3K phosphorylates and activates MKK3/6.
p38_map2k -> p38_mapk Causes
MKK3/6 dually phosphorylates p38.
Part 1: MAP3K tier (ASK1/TAK1/MLK)
Stress-activated MAP3K activationReactionp38_map3k

Stress-activated MAP3Ks (ASK1/MAP3K5, TAK1/MAP3K7, MLK family) phosphorylate and activate MKK3/MKK6.

Annotons

p38-pathway MAP3K activity
p38_map3k_activity
Participant: Family: Stress-activated MAP3Ks (ASK1/TAK1/MLK)
Family:
Stress-activated MAP3Ks (ASK1/TAK1/MLK) ASK1 (MAP3K5), TAK1 (MAP3K7), and MLK-family MAP3Ks feeding the p38 tier.
Representative Members: ASK1 (MAP3K5)UniProtKB:Q99683

Function

MAP kinase kinase kinase activityGO:0004709
Targets: MKK3/MKK6

Top kinase tier; activates MKK3/6.

Part 2: MAP2K tier (MKK3/MKK6)
MKK3/MKK6 MAP kinase kinase activationReactionp38_map2k

The dual-specificity MAP2Ks MKK3 (MAP2K3) and MKK6 (MAP2K6) phosphorylate p38 on both threonine and tyrosine of its TGY motif.

Annotons

MKK3/MKK6 MAP2K activity
p38_map2k_activity
Participant: Family: MKK3/MKK6 (MAP2K3/MAP2K6)
Family:
MKK3/MKK6 (MAP2K3/MAP2K6) Dual-specificity MAP kinase kinases dedicated to the p38 tier.
Representative Members: MKK6 (MAP2K6)UniProtKB:P52564 MKK3 (MAP2K3)UniProtKB:P46734

Function

MAP kinase kinase activityGO:0004708
Targets: p38 TGY motif

Middle kinase tier; dual-specificity activation of p38.

Part 3: MAPK tier (p38)
p38 MAP kinase activationReactionp38_mapk

Dually phosphorylated p38 (alpha/beta/gamma/delta) becomes an active proline-directed serine/threonine kinase acting on cytoplasmic and nuclear substrates.

Annotons

p38 MAP kinase activity
p38_mapk_activity
Participant: Family: p38 MAPKs (MAPK14/11/12/13)
Family:
p38 MAPKs (MAPK14/11/12/13) The terminal stress-activated effector kinases of the p38 cascade.
Representative Members: p38 alpha (MAPK14)UniProtKB:Q16539

Function

MAP kinase activityGO:0004707

Locations

nucleusGO:0005634

Effector kinase transducing the stress signal to substrates.

Part 3: p38 effector and transcriptional output
p38 effector and transcriptional outputRegulatory Stepp38_output

Active p38 phosphorylates the substrate kinase MK2 (MAPKAPK2) and the transcription factors ATF2 and MEF2, driving stress-response and inflammatory gene programs and post-transcriptional control of cytokine mRNAs.

Annotons

p38 substrate phosphorylation and transcriptional activation
p38_substrate_output
Participant: Any With Function: MAP kinase activity
Required Function:
MAP kinase activityGO:0004707

Processes

positive regulation of transcription by RNA polymerase IIGO:0045944

Converts p38 activity into a stress/inflammatory gene program.

Part 4: negative regulation and feedback
DUSP/MKP dephosphorylation of p38Reactionp38_negative_regulation

DUSP/MKP dual-specificity phosphatases (e.g. DUSP1/MKP-1, DUSP10/MKP-5) dephosphorylate the p38 activation loop to terminate signaling, many of them induced by p38 itself as negative feedback.

Annotons

DUSP/MKP phosphatase function
p38_dusp_role
Participant: Family: DUSP/MKP dual-specificity phosphatases (p38-directed)
Family:
DUSP/MKP dual-specificity phosphatases (p38-directed) p38-inactivating dual-specificity (Thr/Tyr) MAP kinase phosphatases.

Dephosphorylates the p38 activation loop to terminate signaling.