col1a1a / col1a1b: annotation comparison

col1a1a / col1a1b: annotation comparison

Generated by projects/DANRE_DUPLICATION/scripts/compare_pair.py; do not edit by hand.

Proteins

col1a1a col1a1b
UniProt Q6U1J5 Q6PEI9
Length (aa) 1447 1449

Global alignment (BLOSUM62, gap -10/-0.5): 76.3% identity, 82.7% similarity over 1453 alignment columns.

Existing annotations by term

Cells show evidence:action. — means the copy has no annotation to that exact term (it may still have a parent or child term).

MF

Term col1a1a col1a1b
GO:0005201 extracellular matrix structural constituent IEA:ACCEPT IEA:ACCEPT
GO:0030020 extracellular matrix structural constituent conferring tensile strength IBA:ACCEPT IBA:ACCEPT

BP

Term col1a1a col1a1b
GO:0001501 skeletal system development IMP:ACCEPT
IMP:REMOVE		 IMP:ACCEPT
GO:0030199 collagen fibril organization IBA:ACCEPT
IMP:ACCEPT		 IBA:ACCEPT
GO:0030278 regulation of ossification IMP:MODIFY —
GO:0030282 bone mineralization IMP:KEEP_AS_NON_CORE —
GO:0031101 fin regeneration IMP:KEEP_AS_NON_CORE —
GO:0033333 fin development IMP:ACCEPT —
GO:0033334 fin morphogenesis IMP:ACCEPT —
GO:0033339 pectoral fin development IMP:KEEP_AS_NON_CORE —
GO:0035630 bone mineralization involved in bone maturation IMP:KEEP_AS_NON_CORE —
GO:0043588 skin development IBA:KEEP_AS_NON_CORE IBA:KEEP_AS_NON_CORE
GO:0046849 bone remodeling IMP:KEEP_AS_NON_CORE —
GO:0048705 skeletal system morphogenesis IBA:KEEP_AS_NON_CORE IBA:KEEP_AS_NON_CORE

CC

Term col1a1a col1a1b
GO:0005576 extracellular region IEA:ACCEPT IEA:ACCEPT
GO:0005584 collagen type I trimer IDA:NEW IDA:NEW
GO:0005737 cytoplasm IBA:REMOVE
IDA:MARK_AS_OVER_ANNOTATED		 IBA:REMOVE
GO:0031012 extracellular matrix IBA:ACCEPT IBA:ACCEPT

Core molecular functions