mitfa / mitfb: annotation comparison

mitfa / mitfb: annotation comparison

Generated by projects/DANRE_DUPLICATION/scripts/compare_pair.py; do not edit by hand.

Proteins

mitfa mitfb
UniProt Q9PWC2 F1Q885
Length (aa) 412 500

Global alignment (BLOSUM62, gap -10/-0.5): 55.0% identity, 64.7% similarity over 515 alignment columns.

Existing annotations by term

Cells show evidence:action. — means the copy has no annotation to that exact term (it may still have a parent or child term).

MF

Term mitfa mitfb
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA:ACCEPT IBA:ACCEPT
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA:ACCEPT
IDA:ACCEPT		 IBA:ACCEPT
IDA:ACCEPT
GO:0046983 protein dimerization activity IEA:KEEP_AS_NON_CORE IEA:KEEP_AS_NON_CORE

BP

Term mitfa mitfb
GO:0006351 DNA-templated transcription IDA:MODIFY IDA:MODIFY
GO:0006355 regulation of DNA-templated transcription IEA:ACCEPT IEA:ACCEPT
GO:0006357 regulation of transcription by RNA polymerase II IBA:ACCEPT IBA:ACCEPT
GO:0007623 circadian rhythm IDA:UNDECIDED —
GO:0030318 melanocyte differentiation IBA:ACCEPT
IGI:ACCEPT
IMP:ACCEPT		 IBA:KEEP_AS_NON_CORE
IGI:KEEP_AS_NON_CORE
GO:0043473 pigmentation IGI:KEEP_AS_NON_CORE
IMP:KEEP_AS_NON_CORE		 —
GO:0045636 positive regulation of melanocyte differentiation IMP:ACCEPT —
GO:0050936 xanthophore differentiation IGI:NEW IGI:NEW
GO:0061386 closure of optic fissure IGI:KEEP_AS_NON_CORE —
GO:0071228 cellular response to tumor cell IMP:REMOVE —

CC

Term mitfa mitfb
GO:0005634 nucleus IBA:ACCEPT
IEA:ACCEPT		 IBA:ACCEPT
IEA:ACCEPT
GO:0005654 nucleoplasm IC:ACCEPT IC:ACCEPT
GO:0005737 cytoplasm IEA:KEEP_AS_NON_CORE IEA:KEEP_AS_NON_CORE

Core molecular functions