vcla / vclb: annotation comparison
Generated by projects/DANRE_DUPLICATION/scripts/compare_pair.py; do not edit by hand.
Proteins
| vcla | vclb | |
|---|---|---|
| UniProt | B3DI32 | A0A0S2I7K2 |
| Length (aa) | 1131 | 1066 |
Global alignment (BLOSUM62, gap -10/-0.5): 81.4% identity, 87.6% similarity over 1131 alignment columns.
Existing annotations by term
Cells show evidence:action. — means the copy has no annotation to that exact term (it may still have a parent or child term).
MF
| Term | vcla | vclb |
|---|---|---|
| GO:0003779 actin binding | IEA:ACCEPT | IEA:ACCEPT |
| GO:0005198 structural molecule activity | IEA:MARK_AS_OVER_ANNOTATED | IEA:MARK_AS_OVER_ANNOTATED |
| GO:0008013 beta-catenin binding | IBA:ACCEPT | IBA:UNDECIDED |
| GO:0045294 alpha-catenin binding | IBA:ACCEPT | IBA:ACCEPT |
| GO:0051015 actin filament binding | IEA:ACCEPT | IEA:ACCEPT |
BP
| Term | vcla | vclb |
|---|---|---|
| GO:0003181 atrioventricular valve morphogenesis | IMP:KEEP_AS_NON_CORE | — |
| GO:0007155 cell adhesion | IBA:ACCEPT IEA:ACCEPT |
IBA:ACCEPT IEA:ACCEPT |
| GO:0007507 heart development | — | IMP:ACCEPT |
| GO:0045214 sarcomere organization | IMP:UNDECIDED | — |
| GO:0060047 heart contraction | IMP:UNDECIDED | — |
| GO:0060977 coronary vasculature morphogenesis | — | IMP:ACCEPT |
| GO:0061028 establishment of endothelial barrier | IGI:NEW | IGI:NEW |
| GO:0086013 membrane repolarization during cardiac muscle cell action potential | IMP:MARK_AS_OVER_ANNOTATED | — |
CC
| Term | vcla | vclb |
|---|---|---|
| GO:0002102 podosome | IEA:KEEP_AS_NON_CORE | IEA:KEEP_AS_NON_CORE |
| GO:0005737 cytoplasm | IBA:ACCEPT | IBA:ACCEPT |
| GO:0005856 cytoskeleton | IBA:ACCEPT IEA:ACCEPT |
IBA:ACCEPT IEA:ACCEPT |
| GO:0005886 plasma membrane | IBA:ACCEPT | IBA:ACCEPT |
| GO:0005911 cell-cell junction | IEA:ACCEPT | IEA:ACCEPT |
| GO:0005912 adherens junction | IBA:ACCEPT IDA:ACCEPT IEA:ACCEPT |
IBA:ACCEPT IDA:ACCEPT IEA:ACCEPT |
| GO:0005925 focal adhesion | IBA:ACCEPT IDA:ACCEPT IEA:ACCEPT IMP:ACCEPT |
IBA:ACCEPT IEA:ACCEPT |
| GO:0015629 actin cytoskeleton | IEA:ACCEPT | IEA:ACCEPT |
| GO:0016020 membrane | IEA:ACCEPT | IEA:ACCEPT |
| GO:0030016 myofibril | IEA:KEEP_AS_NON_CORE | IEA:KEEP_AS_NON_CORE |
| GO:0042383 sarcolemma | IEA:KEEP_AS_NON_CORE | IEA:KEEP_AS_NON_CORE |
| GO:0044291 cell-cell contact zone | IBA:ACCEPT | IBA:ACCEPT |
| GO:0048471 perinuclear region of cytoplasm | IEA:MARK_AS_OVER_ANNOTATED | IEA:MARK_AS_OVER_ANNOTATED |
Core molecular functions
- vcla: GO:0051015 actin filament binding; GO:0045294 alpha-catenin binding
- vclb: GO:0051015 actin filament binding; GO:0051015 actin filament binding; GO:0045294 alpha-catenin binding