Curated entries outside their reference proteomes

Warnings (1)

Curated entries outside their reference proteomes

Generated: 2026-10-18T22:54:42.774030+00:00. Scope: all repository gene reviews.

Select live Swiss-Prot accessions in our local gene-review set whose exact NCBI taxon has a UniProt reference proteome, but whose accession belongs to none of those reference proteomes. All local review statuses, including drafts, are included; duplicate accessions are counted once.

Summary

GO evidence on candidate accessions

These are original cached GOA annotation rows, regardless of our review decisions. Reviewer-proposed NEW annotations are excluded. Exact duplicate rows across caches are counted once per accession. Non-IEA is not synonymous with experimental; IBA remains separately visible as phylogenetic curation. Missing caches are unknown, not zero.

Evidence code Annotation rows
EXP 23
HMP 1
IDA 33
IEA 143
IEP 3
IMP 11
IPI 17
ISS 6
TAS 3

Candidate entries

Accession Local gene Organism Protein Reference proteome(s) Other proteome membership GOA rows Non-IEA Experimental Evidence counts Links
A0A0A7HFE1 STRTR/cas10 Streptococcus thermophilus CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A) UP000232434 None 0 0 0 none GOA
A0A7E6FSU6 OCTVU/DDO Octopus vulgaris D-aspartate oxidase UP001162480 None 13 6 4 EXP: 1; IDA: 3; IEA: 7; ISS: 2 GOA
A2AXI2 STAWA/cfr Staphylococcus warneri Ribosomal RNA large subunit methyltransferase Cfr UP000814367 None 12 0 0 IEA: 12 GOA
A6Q0K5 CHLRE/CP12 Chlamydomonas reinhardtii Calvin cycle protein CP12, chloroplastic UP000006906 None 11 10 7 IDA: 3; IEA: 1; IPI: 4; ISS: 3 GOA
A9PCL4 POPTR/PRX2 Populus trichocarpa Peroxiredoxin-2 UP000006729 None 5 0 0 IEA: 5 GOA
B5UBC1 ORYSJ/PIKM1-TS Oryza sativa subsp. japonica Disease resistance protein Pikm1-TS UP000059680 None 4 0 0 IEA: 4 GOA
D2KBH9 STECR/nas-8 Steinernema carpocapsae Zinc metalloproteinase nas-8 UP000298663 None 6 1 1 EXP: 1; IEA: 5 GOA
F7J0M4 ORYSJ/RGA4 Oryza sativa subsp. japonica Disease resistance protein RGA4 UP000059680 None 14 8 8 EXP: 2; IDA: 3; IEA: 6; IMP: 2; IPI: 1 GOA
F7J0N2 ORYSJ/RGA5 Oryza sativa subsp. japonica Disease resistance protein RGA5 UP000059680 None 16 9 9 EXP: 3; IDA: 3; IEA: 7; IMP: 2; IPI: 1 GOA
G1FNI6 THLAR/TFP Thlaspi arvense N-(sulfonatooxy)prop-2-enimidothioate sulfolyase UP000836841 None 8 3 3 IDA: 3; IEA: 5 GOA
L7N6F8 DERPT/Derp23 Dermatophagoides pteronyssinus Major mite allergen Der p 23 UP000887458 None 8 5 5 IDA: 4; IEA: 3; IMP: 1 GOA
O65862 POPTR/CCOAOMT1 Populus trichocarpa Caffeoyl-CoA O-methyltransferase 1 UP000006729 None 3 0 0 IEA: 3 GOA
O65922 POPTR/CCOAOMT2 Populus trichocarpa Caffeoyl-CoA O-methyltransferase 2 UP000006729 None 3 0 0 IEA: 3 GOA
P06107 STAHA/lnuA Staphylococcus haemolyticus Lincosamide resistance protein UP000306300 None 0 0 0 none GOA
P06519 PSEPK/xylR Pseudomonas putida Transcriptional regulatory protein XylR UP000218731 None 3 0 0 IEA: 3 GOA
P08176 DERPT/Derp1 Dermatophagoides pteronyssinus Peptidase 1 UP000887458 None 5 2 2 EXP: 1; IDA: 1; IEA: 3 GOA
P09130 ECOLI/traD Escherichia coli (strain K12) Coupling protein TraD UP000000625 None 2 1 1 IEA: 1; IMP: 1 GOA
P0A434 BREDI/opd Brevundimonas diminuta Parathion hydrolase UP000596117 None 6 2 2 IDA: 2; IEA: 4 GOA
P0DH90 ARATH/FRI Arabidopsis thaliana Protein FRIGIDA UP000006548 None 3 2 2 IEA: 1; IPI: 2 GOA
P13664 TOXGO/SAG1 Toxoplasma gondii Major surface antigen p30 UP000557509 None 2 0 0 IEA: 2 GOA
P15802 PENCH/aatA Penicillium chrysogenum Isopenicillin-N N-acyltransferase UP001220256 None 9 6 6 EXP: 2; IDA: 4; IEA: 3 GOA
P16579 POPTR/WIN6 Populus trichocarpa Acidic endochitinase WIN6 UP000006729 None 7 0 0 IEA: 7 GOA
P18004 ECOLI/traC Escherichia coli (strain K12) Protein TraC UP000000625 None 1 0 0 IEA: 1 GOA
P22287 FULFL/AVR9 Fulvia fulva Race-specific elicitor A9 UP000756132 None 5 5 3 EXP: 3; TAS: 2 GOA
P22643 XANAU/dhlA Xanthobacter autotrophicus Haloalkane dehalogenase UP001161920, UP001603991 None 4 0 0 IEA: 4 GOA
P34105 POPTR/MAOX Populus trichocarpa NADP-dependent malic enzyme UP000006729 None 7 0 0 IEA: 7 GOA
P41067 ECOLI/traB Escherichia coli (strain K12) Protein TraB UP000000625 None 1 1 1 IDA: 1 GOA
P45730 POPTR/PAL Populus trichocarpa Phenylalanine ammonia-lyase UP000006729 None 9 1 0 IEA: 8; ISS: 1 GOA
P49264 THLAR/CYP71B1 Thlaspi arvense Cytochrome P450 71B1 UP000836841 None 4 0 0 IEA: 4 GOA
P49278 DERPT/Derp2 Dermatophagoides pteronyssinus Mite group 2 allergen Der p 2 UP000887458 None 5 2 2 IEA: 3; IPI: 2 GOA
Q00363 FULFL/AVR4 Fulvia fulva Race-specific elicitor A4 UP000756132 None 10 8 7 EXP: 6; IEA: 2; IMP: 1; TAS: 1 GOA
Q04720 BACAN/ermJ Bacillus anthracis rRNA adenine N-6-methyltransferase UP000000427, UP000000594 None 3 0 0 IEA: 3 GOA
Q07341 MOOTH/acsD Neomoorella thermoacetica Corrinoid/iron-sulfur protein small subunit UP000322283 None 7 4 4 IDA: 1; IEA: 3; IPI: 3 GOA
Q54FI4 DICDI/chlA Dictyostelium discoideum Flavin-dependent halogenase chlA UP000002195 None 10 8 8 EXP: 2; HMP: 1; IDA: 1; IEA: 2; IMP: 4 GOA
Q6RHR6 MEDTR/DMI1 Medicago truncatula Ion channel DMI1 UP000002051 None 7 4 4 EXP: 1; IEA: 3; IPI: 3 GOA
Q8L4H4 MEDTR/NORK Medicago truncatula Nodulation receptor kinase UP000002051 None 9 4 4 EXP: 1; IDA: 2; IEA: 5; IPI: 1 GOA
Q93XQ5 NICAT/NaPMT1.1 Nicotiana attenuata Putrescine N-methyltransferase 1 UP000187609 None 10 3 3 IEA: 7; IEP: 3 GOA
Q945B5 ARATH/AOP2 Arabidopsis thaliana 2-oxoglutarate-dependent dioxygenase AOP2 UP000006548 None 4 2 2 IDA: 2; IEA: 2 GOA
Q9GF35 THLAR/matK Thlaspi arvense Maturase K UP000836841 None 4 0 0 IEA: 4 GOA

Interpretation and requested follow-up

Please check whether these curated accessions should be linked to the reference proteome, or whether another accession represents the same locus/sequence. If a TrEMBL counterpart exists, assess sequence equivalence and preservation of experimentally supported and other non-IEA GO annotations before changing the accession used in our reviews.

Absence of an accession does not establish absence of its gene, sequence, or GO annotations from the reference proteome, and does not imply planned deletion from Swiss-Prot. This report has not mapped alternative accessions or measured unique annotation loss. Different strains and descendant taxa are not treated as the same taxon.

Provenance

UniProt release(s): 2026_03. API retrieval range: 2026-10-18T22:51:43.004469+00:00 to 2026-10-18T22:52:23.893434+00:00.

Membership uses the UniProtKB Proteomes cross-references and the Proteomes API's reference classification. API query caches expire after seven days; --refresh fetches anew and --offline reuses dated caches. Network/pagination failures abort instead of inferring absence. The CSV records GOA source paths and SHA-256 hashes; annotation dates below are GOA DATE values, not download timestamps.

Accession Local GOA source GOA annotation date range Cache status
A0A0A7HFE1 genes/STRTR/cas10/cas10-goa.tsv – available
A0A7E6FSU6 genes/OCTVU/DDO/DDO-goa.tsv 20231106–20260428 available
A2AXI2 genes/STAWA/cfr/cfr-goa.tsv 20260601–20260601 available
A6Q0K5 genes/CHLRE/CP12/CP12-goa.tsv 20120329–20260302 available
A9PCL4 genes/POPTR/PRX2/PRX2-goa.tsv 20260601–20260601 available
B5UBC1 genes/ORYSJ/PIKM1-TS/PIKM1-TS-goa.tsv 20260727–20260727 available
D2KBH9 genes/STECR/nas-8/nas-8-goa.tsv 20190404–20260616 available
F7J0M4 genes/ORYSJ/RGA4/RGA4-goa.tsv 20180515–20260727 available
F7J0N2 genes/ORYSJ/RGA5/RGA5-goa.tsv 20180515–20260727 available
G1FNI6 genes/THLAR/TFP/TFP-goa.tsv 20230310–20260601 available
L7N6F8 genes/DERPT/Derp23/Derp23-goa.tsv 20190402–20260616 available
O65862 genes/POPTR/CCOAOMT1/CCOAOMT1-goa.tsv 20260227–20260428 available
O65922 genes/POPTR/CCOAOMT2/CCOAOMT2-goa.tsv 20260227–20260428 available
P06107 genes/STAHA/lnuA/lnuA-goa.tsv – available
P06519 genes/PSEPK/xylR/xylR-goa.tsv 20260302–20260302 available
P08176 genes/DERPT/Derp1/Derp1-goa.tsv 20250620–20260616 available
P09130 genes/ECOLI/traD/traD-goa.tsv 20170408–20260727 available
P0A434 genes/BREDI/opd/opd-goa.tsv 20130511–20260727 available
P0DH90 genes/ARATH/FRI/FRI-goa.tsv 20180207–20260727 available
P13664 genes/TOXGO/SAG1/SAG1-goa.tsv 20260727–20260727 available
P15802 genes/PENCH/aatA/aatA-goa.tsv 20220228–20260727 available
P16579 genes/POPTR/WIN6/WIN6-goa.tsv 20260601–20260601 available
P18004 genes/ECOLI/traC/traC-goa.tsv 20260727–20260727 available
P22287 genes/FULFL/AVR9/AVR9-goa.tsv 20250611–20260616 available
P22643 genes/XANAU/dhlA/dhlA-goa.tsv 20260227–20260727 available
P34105 genes/POPTR/MAOX/MAOX-goa.tsv 20260428–20260428 available
P41067 genes/ECOLI/traB/traB-goa.tsv 20150320–20150320 available
P45730 genes/POPTR/PAL/PAL-goa.tsv 20211209–20260428 available
P49264 genes/THLAR/CYP71B1/CYP71B1-goa.tsv 20260601–20260601 available
P49278 genes/DERPT/Derp2/Derp2-goa.tsv 20260613–20260616 available
Q00363 genes/FULFL/AVR4/AVR4-goa.tsv 20200720–20260727 available
Q04720 genes/BACAN/ermJ/ermJ-goa.tsv 20260601–20260601 available
Q07341 genes/MOOTH/acsD/acsD-goa.tsv 20130423–20250429 available
Q54FI4 genes/DICDI/chlA/chlA-goa.tsv 20130212–20260706 available
Q6RHR6 genes/MEDTR/DMI1/DMI1-goa.tsv 20160613–20260727 available
Q8L4H4 genes/MEDTR/NORK/NORK-goa.tsv 20160425–20260727 available
Q93XQ5 genes/NICAT/NaPMT1.1/NaPMT1.1-goa.tsv 20220119–20260302 available
Q945B5 genes/ARATH/AOP2/AOP2-goa.tsv 20140115–20260727 available
Q9GF35 genes/THLAR/matK/matK-goa.tsv 20260601–20260601 available

Data diagnostics