FBXL8

UniProt ID: Q96CD0
Organism: Homo sapiens
Review Status: COMPLETE
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Gene Description

FBXL8 (F-box/LRR-repeat protein 8, FBL8) is a member of the FBXL subfamily of F-box proteins. It has an N-terminal F-box domain through which it docks onto the SKP1 adaptor and, via SKP1, onto CUL1 and the catalytic RING subunit RBX1, assembling a Cullin-RING (SCF) E3 ubiquitin ligase in which the F-box protein serves as the substrate-recognition subunit. Despite the "LRR" in its name, UniProt notes that FBXL8 does not actually contain canonical leucine-rich repeats; nonetheless its C-terminal substrate-binding region is functionally required for substrate engagement (deletion of either the F-box or the C-terminal region abolishes substrate turnover). FBXL8 acts as the substrate-recognition subunit of SCF-FBXL8 and targets several substrates in a strongly context-dependent manner: it promotes ubiquitination and proteasomal degradation of the tumor suppressor p53 (in colorectal cancer), of Thr283- phosphorylated cyclin D3 (CCND3) (in lymphoma), of Snail1 (in post-myocardial- infarction cardiac fibroblasts, dampening RhoA signaling and myofibroblast differentiation), and of unphosphorylated c-MYC (a distinct c-MYC pool from that controlled by FBXW7, with reported heterotypic K48/K63 chains); CCND2 and IRF5 are additional candidate substrates accumulating upon FBXL8 knockdown. Reported localization is predominantly cytoplasmic (loss of FBXL8 causes nuclear c-MYC accumulation), and in heart FBXL8 is enriched in cardiac fibroblasts. Its net effect is context-dependent rather than uniformly oncogenic or tumor-suppressive: oncogenic in colorectal and breast cancer, but tumor-suppressive in lymphoma and anti-fibrotic after myocardial infarction.

Existing Annotations Review

GO Term Evidence Action Reason
GO:0005515 protein binding
IPI
PMID:19159283
Array MAPPIT: high-throughput interactome analysis in mammal...
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by the Array MAPPIT high-throughput screen. The SKP1 interaction is the defining F-box-domain partnership, but the bare protein binding term is uninformative.
Reason: Records the functionally meaningful FBXL8-SKP1 interaction (the basis of SCF assembly), but bare protein binding is uninformative per curation guidelines; the SCF/SCF-degradation annotations capture this relationship.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0005515 protein binding
IPI
PMID:25416956
A proteome-scale map of the human interactome network.
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by a proteome-scale interactome map. Bare protein binding is uninformative.
Reason: Records the FBXL8-SKP1 interaction underlying SCF assembly, but bare protein binding is uninformative.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0005515 protein binding
IPI
PMID:26496610
A human interactome in three quantitative dimensions organiz...
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by a quantitative-interactome study. Bare protein binding is uninformative.
Reason: Records the FBXL8-SKP1 interaction, but bare protein binding is uninformative.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0005515 protein binding
IPI
PMID:27705803
A High-Density Map for Navigating the Human Polycomb Complex...
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by the Polycomb complexome AP-MS study. Bare protein binding is uninformative.
Reason: Records the FBXL8-SKP1 interaction, consistent with SCF assembly rather than a Polycomb-specific function; bare protein binding is uninformative.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
KEEP AS NON CORE
Summary: IntAct binary-interactome interactions captured here include ALAS1 (P13196), PICK1 (Q9NRD5) and SKP1 (P63208). SKP1 is the canonical F-box partner; ALAS1/PICK1 are candidate substrates/partners but not experimentally validated as FBXL8 substrates. Bare protein binding is uninformative.
Reason: Records real binary interactions (including the SCF-defining SKP1 partner and candidate substrates ALAS1/PICK1), but bare protein binding is uninformative and no substrate relationship is experimentally established.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P13196: ALAS1; NbExp=3; IntAct=EBI-2321097, EBI-3905054;
GO:0005515 protein binding
IPI
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling...
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by the BioPlex dual proteome-scale interactome. Bare protein binding is uninformative.
Reason: Records the FBXL8-SKP1 interaction, but bare protein binding is uninformative.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0005515 protein binding
IPI
PMID:40205054
Multimodal cell maps as a foundation for structural and func...
KEEP AS NON CORE
Summary: IntAct interaction with SKP1 (WITH/FROM UniProtKB:P63208) captured by a multimodal cell-map interactome study. Bare protein binding is uninformative.
Reason: Records the FBXL8-SKP1 interaction, but bare protein binding is uninformative.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Q96CD0; P63208: SKP1; NbExp=18; IntAct=EBI-2321097, EBI-307486;
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
NAS
PMID:33234069
The FBXL family of F-box proteins: variations on a theme.
ACCEPT
Summary: ComplexPortal/NAS assignment that FBXL8, as an SCF substrate receptor, participates in SCF-dependent proteasomal degradation. This is the core biological process for an F-box protein, and FBXL8-specific degradative substrates are now reported in the primary literature (p53 in colorectal cancer, Thr283-phospho-cyclin D3 in lymphoma, Snail1 in cardiac fibroblasts, and unphosphorylated c-MYC).
Reason: Consistent with FBXL8 being a substrate-recognition subunit of an SCF E3 ligase (documented SKP1/CUL1 interaction); SCF-dependent degradation is the canonical core process for F-box proteins, and multiple FBXL8 substrates whose turnover requires the F-box are now experimentally documented.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
file:human/FBXL8/FBXL8-deep-research-falcon.md
Across multiple primary studies, FBXL8 functions as an **SCF E3 ligase adaptor** that promotes **substrate ubiquitination**, frequently leading to **proteasome-dependent degradation** of specific targets
GO:0005829 cytosol
TAS
Reactome:R-HSA-8952618
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation, propagated across the generic CRL1/neddylation reaction set. The cytosol is a plausible compartment for an SCF substrate receptor.
Reason: Plausible localization for a cytosolic SCF component, but derived from generic CRL pathway membership (one of many identical Reactome reactions) rather than FBXL8-specific evidence.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-8952620
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic CRL1 neddylation reaction set.
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-8955241
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic CRL (CAND1) reaction set.
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-8955289
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic CRL (COMMD/CAND1) reaction set.
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-8956040
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic CRL deneddylation (COP9) reaction set.
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-8956200
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic CRL1 (DCUN1D3) reaction set.
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-983140
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic ubiquitination reaction set (transfer of Ub from E2 to substrate).
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-983147
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic ubiquitination reaction set (release of E3 from substrate).
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-983156
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic ubiquitination reaction set (polyubiquitination of substrate).
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
GO:0005829 cytosol
TAS
Reactome:R-HSA-983157
KEEP AS NON CORE
Summary: Reactome pathway-level cytosol annotation from the generic ubiquitination reaction set (interaction of E3 with substrate and E2-Ub).
Reason: Plausible but redundant generic-pathway localization; not FBXL8-specific.
Supporting Evidence:
file:human/FBXL8/FBXL8-uniprot.txt
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.

Core Functions

Substrate-recognition subunit of an SCF (SKP1-CUL1-F-box) E3 ubiquitin ligase complex; uses its F-box domain to assemble with SKP1/CUL1/RBX1 and its C-terminal substrate-binding region to recruit substrates for ubiquitination and proteasomal degradation. Despite the gene name it lacks canonical leucine-rich repeats, but the C-terminal region is functionally required for substrate turnover.

Supporting Evidence:
  • file:human/FBXL8/FBXL8-uniprot.txt
    Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
  • file:human/FBXL8/FBXL8-deep-research-falcon.md
    FBXL8 physically associates with p53 (co-immunoprecipitation), increases p53 ubiquitination, and accelerates p53 turnover in cycloheximide chase experiments; **both the F-box and LRR regions are required** for this effect, because Ξ”Fbox and Ξ”LRR constructs fail to influence p53 stability like full-length FBXL8

References

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Suggested Questions for Experts

Q: What determines the strikingly context-dependent outcomes of FBXL8 activity (oncogenic in colorectal/breast cancer versus tumor-suppressive in lymphoma and anti-fibrotic in heart)? Is it substrate availability, post-translational state of substrates, or tissue-specific cofactors?

Q: Are the binary-interactome partners ALAS1 and PICK1 genuine FBXL8 substrates, distinct from the validated p53/CCND3/Snail1/c-MYC set, and under what conditions are they degraded?

Q: What is the basis of FBXL8 substrate recognition given that it lacks canonical leucine-rich repeats yet its C-terminal region is required for substrate engagement?

Suggested Experiments

Experiment: Perform affinity purification-mass spectrometry of tagged FBXL8 (stabilized with proteasome and neddylation inhibitors) across multiple cell types (colorectal, lymphoma, cardiac fibroblast) to map the tissue-dependent substrate repertoire relative to an F-box-deletion mutant unable to assemble into SCF.

Experiment: Reconstitute SCF-FBXL8 in vitro and test direct ubiquitination of validated and candidate substrates (p53, phospho-Thr283 cyclin D3, Snail1, unphosphorylated c-MYC, ALAS1, PICK1), mapping ubiquitin-chain linkage type and the C-terminal residues required for substrate binding.

Deep Research

Falcon

(FBXL8-deep-research-falcon.md)

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πŸ“š Additional Documentation

Pn Notes

(FBXL8-pn-notes.md)

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