ADRM1 encodes the human proteasomal ubiquitin receptor Rpn13, a 19S regulatory-particle subunit/cofactor of the 26S proteasome. Its N-terminal Pru domain binds ubiquitin signals and the Rpn2/PSMD1 proteasome scaffold, while its C-terminal DEUBAD region binds the UCHL5/UCH37 deubiquitinase. Through these interactions ADRM1 helps recruit ubiquitinated substrates and coordinate deubiquitinase activity during proteasome-mediated protein degradation in cytosolic and nuclear proteostasis.
| GO Term | Evidence | Action | Reason |
|---|---|---|---|
|
GO:0008541
proteasome regulatory particle, lid subcomplex
|
IBA
GO_REF:0000033 |
MODIFY |
Summary: The evidence supports ADRM1/Rpn13 as a 19S regulatory-particle ubiquitin receptor, but the lid-subcomplex placement is less accurate for ADRM1 than the base-subcomplex placement used by the PN projection.
Reason: Modify to proteasome regulatory particle, base subcomplex. Primary and structural literature describe Rpn13/ADRM1 as a 19S regulatory-particle subunit and as one of the base ubiquitin receptors; this supports the PN base-subcomplex projection and argues against retaining the lid-subcomplex term for ADRM1.
Proposed replacements:
proteasome regulatory particle, base subcomplex
proteasome regulatory particle
Supporting Evidence:
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
file:human/ADRM1/ADRM1-deep-research-manual.md
The Proteostasis PN projection is conservative for ADRM1; proteasome complex and regulatory-particle terms are safe, and literature supports modifying the lid-subcomplex annotation to the base subcomplex.
|
|
GO:0061133
endopeptidase activator activity
|
IBA
GO_REF:0000033 |
MODIFY |
Summary: ADRM1 activates the proteasome-associated deubiquitinase UCHL5/UCH37, so the current endopeptidase activator term is too generic and mechanistically imprecise.
Reason: Modify to deubiquitinase activator activity. The cited evidence is about recruiting/activating UCH37/UCHL5 deubiquitinating activity at 26S proteasomes, not a broad endopeptidase activator role.
Proposed replacements:
deubiquitinase activator activity
Supporting Evidence:
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:16990800
loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0070628
proteasome binding
|
IBA
GO_REF:0000033 |
ACCEPT |
Summary: ADRM1 binds/incorporates into the 26S proteasome regulatory particle through its Rpn13/Rpn2-associated receptor role.
Reason: Accept as a direct molecular function. ADRM1 is a proteasome-associated ubiquitin receptor and interacts with the proteasome scaffolding protein Rpn2/PSMD1; this is also consistent with the PN regulatory-particle projection.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
|
|
GO:0005634
nucleus
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005737
cytoplasm
|
IEA
GO_REF:0000120 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005515
protein binding
|
IPI
PMID:16713569 A protein-protein interaction network for human inherited at... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
MODIFY |
Summary: This protein-binding evidence is real but should be represented by more specific proteasome binding and UCHL5/UCH37 binding terms.
Reason: Modify away from generic protein binding. The original evidence supports ADRM1 association with proteasome subunits and the UCHL5/UCH37 deubiquitinase, which are better captured by proteasome binding and ubiquitin-specific protease binding/deubiquitinase-regulator annotations.
Proposed replacements:
proteasome binding
ubiquitin-specific protease binding
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:17139257 hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds ... |
MODIFY |
Summary: This protein-binding evidence is real but should be represented by more specific proteasome binding and UCHL5/UCH37 binding terms.
Reason: Modify away from generic protein binding. The original evidence supports ADRM1 association with proteasome subunits and the UCHL5/UCH37 deubiquitinase, which are better captured by proteasome binding and ubiquitin-specific protease binding/deubiquitinase-regulator annotations.
Proposed replacements:
proteasome binding
ubiquitin-specific protease binding
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:18497817 Proteasome subunit Rpn13 is a novel ubiquitin receptor. |
MODIFY |
Summary: This protein-binding row captures direct ubiquitin/UBL-substrate receptor evidence and should be replaced by ubiquitin binding.
Reason: Modify to ubiquitin binding. Husnjak et al. identify Rpn13/ADRM1 as a proteasomal ubiquitin receptor and map ubiquitin binding to the Pru domain; generic protein binding hides the informative molecular function.
Proposed replacements:
ubiquitin binding
Supporting Evidence:
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
Rpn13 functions as a ubiquitin receptor for the proteasome
|
|
GO:0005515
protein binding
|
IPI
PMID:18922472 Distinct modes of regulation of the Uch37 deubiquitinating e... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:19490896 Assembly pathway of the Mammalian proteasome base subcomplex... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:19615732 Defining the human deubiquitinating enzyme interaction lands... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:20059542 Cross-species divergence of the major recognition pathways o... |
MODIFY |
Summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit interactions, but those should be represented with more specific terms.
Reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is too broad for curation.
Proposed replacements:
ubiquitin binding
proteasome binding
Supporting Evidence:
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
PMID:24811749
Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade ubiquitin-conjugated proteins
|
|
GO:0005515
protein binding
|
IPI
PMID:21516116 Next-generation sequencing to generate interactome datasets. |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:24811749 Autoubiquitination of the 26S proteasome on Rpn13 regulates ... |
MODIFY |
Summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit interactions, but those should be represented with more specific terms.
Reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is too broad for curation.
Proposed replacements:
ubiquitin binding
proteasome binding
Supporting Evidence:
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
PMID:24811749
Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade ubiquitin-conjugated proteins
|
|
GO:0005515
protein binding
|
IPI
PMID:25416956 A proteome-scale map of the human interactome network. |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:27107012 Pooled-matrix protein interaction screens using Barcode Fusi... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:28514442 Architecture of the human interactome defines protein commun... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:31064842 Phosphorylation of Tyr-950 in the proteasome scaffolding pro... |
MODIFY |
Summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit interactions, but those should be represented with more specific terms.
Reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is too broad for curation.
Proposed replacements:
ubiquitin binding
proteasome binding
Supporting Evidence:
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
PMID:24811749
Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade ubiquitin-conjugated proteins
|
|
GO:0005515
protein binding
|
IPI
PMID:31515488 Extensive disruption of protein interactions by genetic vari... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:33961781 Dual proteome-scale networks reveal cell-specific remodeling... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0005515
protein binding
|
IPI
PMID:40205054 Multimodal cell maps as a foundation for structural and func... |
MARK AS OVER ANNOTATED |
Summary: This generic protein-binding annotation comes from interaction evidence, but generic protein binding is uninformative for ADRM1.
Reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator. Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
Supporting Evidence:
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0000502
proteasome complex
|
NAS
PMID:29636472 Structural mechanism for nucleotide-driven remodeling of the... |
ACCEPT |
Summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly recovered in proteasome structural and biochemical studies.
Reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0000502
proteasome complex
|
NAS
PMID:33729481 Proteasome in action: substrate degradation by the 26S prote... |
ACCEPT |
Summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly recovered in proteasome structural and biochemical studies.
Reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0000502
proteasome complex
|
NAS
PMID:37228199 An abundance of free regulatory (19S) proteasome particles r... |
ACCEPT |
Summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly recovered in proteasome structural and biochemical studies.
Reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0005829
cytosol
|
NAS
PMID:12032076 Properties of the hybrid form of the 26S proteasome containi... |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0006979
response to oxidative stress
|
NAS
PMID:35858375 Structural insights into the human PA28-20S proteasome enabl... |
MARK AS OVER ANNOTATED |
Summary: The cited PA28-20S structural work does not provide ADRM1-specific oxidative-stress function.
Reason: Mark as over-annotated. Proteasome capacity and ADRM1/Rpn13 autoubiquitination can respond to proteotoxic stress, but the GOA-cited PA28-20S paper does not make ADRM1 a direct response-to-oxidative-stress gene product.
Supporting Evidence:
PMID:24811749
Rpn13 becomes extensively and selectively poly-ubiquitinated by the proteasome-associated ubiquitin ligase, Ube3c/Hul5
PMID:24811749
Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade ubiquitin-conjugated proteins
|
|
GO:0008021
synaptic vesicle
|
NAS
PMID:37228199 An abundance of free regulatory (19S) proteasome particles r... |
MARK AS OVER ANNOTATED |
Summary: The cited work supports free 19S regulatory particles near synapses, but not ADRM1 as a synaptic-vesicle component.
Reason: Mark as over-annotated. A 19S regulatory-particle pool at synapses is relevant proteasome biology, but synaptic vesicle is too specific for ADRM1 without direct ADRM1-resolved localization evidence.
Supporting Evidence:
PMID:37228199
unexpected abundance of free 19S particles near synapses
|
|
GO:0010498
proteasomal protein catabolic process
|
NAS
PMID:33729481 Proteasome in action: substrate degradation by the 26S prote... |
ACCEPT |
Summary: ADRM1 contributes to proteasomal protein catabolism by recognizing ubiquitinated substrates as Rpn13 and supporting proteasome-associated UCHL5 activity.
Reason: Accept as a direct proteostasis process at an appropriate broad level. ADRM1 is not the protease catalytic subunit, but its ubiquitin-receptor and UCHL5-regulatory roles are part of proteasomal substrate processing.
Supporting Evidence:
PMID:17139257
Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates and decreases the degradation of short-lived proteins
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated cyclin B was strongly stimulated
PMID:33729481
Proteasomes are also vital for maintaining intracellular protein quality control by removing misfolded or aggregate-prone damaged proteins
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
NAS
PMID:19489727 Recognition and processing of ubiquitin-protein conjugates b... |
ACCEPT |
Summary: ADRM1/Rpn13 functions in ubiquitin-dependent proteasomal degradation by binding ubiquitin signals and supporting 26S proteasome substrate processing.
Reason: Accept as a core biological process. Multiple primary studies and reviews support ADRM1 as a 26S proteasome ubiquitin receptor required for efficient degradation of ubiquitin conjugates.
Supporting Evidence:
PMID:17139257
Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates and decreases the degradation of short-lived proteins
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated cyclin B was strongly stimulated
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
|
NAS
PMID:33729481 Proteasome in action: substrate degradation by the 26S prote... |
ACCEPT |
Summary: ADRM1/Rpn13 functions in ubiquitin-dependent proteasomal degradation by binding ubiquitin signals and supporting 26S proteasome substrate processing.
Reason: Accept as a core biological process. Multiple primary studies and reviews support ADRM1 as a 26S proteasome ubiquitin receptor required for efficient degradation of ubiquitin conjugates.
Supporting Evidence:
PMID:17139257
Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates and decreases the degradation of short-lived proteins
PMID:18497817
Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain
PMID:20471946
When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated cyclin B was strongly stimulated
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0061136
regulation of proteasomal protein catabolic process
|
NAS
PMID:12032076 Properties of the hybrid form of the 26S proteasome containi... |
ACCEPT |
Summary: ADRM1 regulates proteasomal protein catabolism through substrate-recognition and UCHL5-recruitment mechanisms.
Reason: Accept. The term is broad, but it fits ADRM1/Rpn13 as a ubiquitin receptor and UCHL5 recruiter whose loss or modification changes degradation of ubiquitin conjugates.
Supporting Evidence:
PMID:17139257
Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates and decreases the degradation of short-lived proteins
PMID:20471946
When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated cyclin B was strongly stimulated
PMID:24811749
Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade ubiquitin-conjugated proteins
|
|
GO:0071357
cellular response to type I interferon
|
NAS
PMID:31380390 Regulation of Proteasome Activity by (Post-)transcriptional ... |
MARK AS OVER ANNOTATED |
Summary: The cited review discusses proteasome regulation in broad cellular contexts and does not establish ADRM1 as a direct type-I-interferon response effector.
Reason: Mark as over-annotated. Type-I-interferon biology can regulate proteasome composition/activity, but ADRM1 should not receive a gene-level cellular response to type I interferon annotation from this broad proteasome-regulation review.
Supporting Evidence:
PMID:31380390
altered transcription of proteasomal subunits and activators
|
|
GO:0005654
nucleoplasm
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
IDA
GO_REF:0000052 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005634
nucleus
|
EXP
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005737
cytoplasm
|
EXP
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-174058 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-187574 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-188191 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-5635854 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-68825 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-69600 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-8939801 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-8952408 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-HSA-9762096 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005654
nucleoplasm
|
TAS
Reactome:R-NUL-9604648 |
ACCEPT |
Summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome distribution.
Reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1168640 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1234159 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1236970 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-1504193 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-174105 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-174202 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-174203 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-174255 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-180573 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-180603 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-209061 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-2130282 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-264458 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-353125 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-3640874 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-450466 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4608855 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4641256 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-4641260 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5362448 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5387392 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5607724 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5607731 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5610754 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5610758 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5610760 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5635868 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5658430 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5665854 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5665871 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5668481 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5668520 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5687112 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-5689539 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-68948 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-69016 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-75825 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8850992 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8852354 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8854044 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8854071 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8866553 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8866858 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8932355 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956140 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8956184 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-8957265 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9755303 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9755306 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9766223 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-983150 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9907980 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9908026 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9908178 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9929352 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9929486 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9931314 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9934893 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-HSA-9954728 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-212917 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-5610751 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0005829
cytosol
|
TAS
Reactome:R-NUL-9011324 |
ACCEPT |
Summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization annotations also support cytosol/cytoplasm.
Reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement of the proteasome catalyst in substrate-degradation events; they should not be read as separate substrate-specific ADRM1 functions.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:33729481
The 26S proteasome is the major proteasome species in eukaryotes, responsible for proteolysis in the cytoplasm, in the nucleus
|
|
GO:0140678
molecular function inhibitor activity
|
EXP
PMID:20471946 Structure of proteasome ubiquitin receptor hRpn13 and its ac... |
MARK AS OVER ANNOTATED |
Summary: The evidence describes intramolecular/autoregulatory inhibition of free hRpn13 ubiquitin-receptor activity by its C-terminal domain, not ADRM1 acting primarily as a standalone inhibitor.
Reason: Mark as over-annotated. The autoinhibitory structural state is real, but the core function of ADRM1 is proteasomal ubiquitin receptor/deubiquitinase regulator; proteasome docking activates ubiquitin binding, so a broad inhibitor-activity annotation overstates the gene product role.
Supporting Evidence:
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
PMID:20471946
hRpn13's Uch37-binding domain can inhibit its activity as a ubiquitin receptor
|
|
GO:0000502
proteasome complex
|
IDA
PMID:17323924 Mass spectrometric characterization of the affinity-purified... |
ACCEPT |
Summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly recovered in proteasome structural and biochemical studies.
Reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0061133
endopeptidase activator activity
|
IDA
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
MODIFY |
Summary: ADRM1 activates the proteasome-associated deubiquitinase UCHL5/UCH37, so the current endopeptidase activator term is too generic and mechanistically imprecise.
Reason: Modify to deubiquitinase activator activity. The cited evidence is about recruiting/activating UCH37/UCHL5 deubiquitinating activity at 26S proteasomes, not a broad endopeptidase activator role.
Proposed replacements:
deubiquitinase activator activity
Supporting Evidence:
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:16990800
loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
|
|
GO:0002020
protease binding
|
IPI
PMID:18922472 Distinct modes of regulation of the Uch37 deubiquitinating e... |
MODIFY |
Summary: The original protease-binding row is specifically UCHL5/UCH37 binding and should use the more informative ubiquitin-specific protease binding term.
Reason: Modify to ubiquitin-specific protease binding. UCHL5/UCH37 is a proteasome-associated deubiquitinating enzyme, and ADRM1 binds/recruits it through the C-terminal DEUBAD region.
Proposed replacements:
ubiquitin-specific protease binding
Supporting Evidence:
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:17139257
The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity
PMID:18922472
The conserved DUB Uch37 is found on proteasomes
PMID:20471946
Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin and Uch37
|
|
GO:0070628
proteasome binding
|
IDA
PMID:18162577 Relative structural and functional roles of multiple deubiqu... |
ACCEPT |
Summary: ADRM1 binds/incorporates into the 26S proteasome regulatory particle through its Rpn13/Rpn2-associated receptor role.
Reason: Accept as a direct molecular function. ADRM1 is a proteasome-associated ubiquitin receptor and interacts with the proteasome scaffolding protein Rpn2/PSMD1; this is also consistent with the PN regulatory-particle projection.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:20471946
hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain interactions, thus activating hRpn13 for ubiquitin binding
|
|
GO:0000502
proteasome complex
|
IDA
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
ACCEPT |
Summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly recovered in proteasome structural and biochemical studies.
Reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
PMID:29636472
Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors Rpn10 and Rpn13, the base subunits within the holoenzyme
PMID:33729481
Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin tag on the substrate
|
|
GO:0006368
transcription elongation by RNA polymerase II
|
IMP
PMID:11818576 Human Elongator facilitates RNA polymerase II transcription ... |
UNDECIDED |
Summary: The cached abstract for the cited Elongator paper does not connect ADRM1 to RNA polymerase II transcription elongation, but this is an IMP (experimental) annotation whose full text is not available.
Reason: This is an experimental (IMP) annotation citing PMID:11818576, which is abstract-only in our cache (full_text_available:false), so the supporting evidence cannot be verified. Per project guidelines, unverifiable experimental annotations should be UNDECIDED rather than REMOVE. Biologically the annotation is implausible - ADRM1/Rpn13 is a 26S proteasome ubiquitin receptor and is not a subunit of the human Elongator complex (ELP1-6); its supported role is proteasomal ubiquitin recognition and UCHL5/UCH37 regulation. Flagged for a curator with full-text access to confirm mis-attribution before removal.
Supporting Evidence:
PMID:11818576
human Elongator facilitates transcription by RNA polymerase II
|
|
GO:0043248
proteasome assembly
|
IDA
PMID:16990800 A novel proteasome interacting protein recruits the deubiqui... |
MARK AS OVER ANNOTATED |
Summary: ADRM1 is recruited to 26S proteasomes and recruits UCHL5, but the cited evidence does not clearly show a proteasome assembly process role.
Reason: Mark as over-annotated. The evidence supports proteasome binding/base-subcomplex membership and UCHL5 recruitment. It does not show ADRM1 catalyzing or directing proteasome assembly as a core biological process.
Supporting Evidence:
PMID:16990800
we describe the identification of Adrm1 as a novel proteasome interacting protein in mammalian cells
PMID:16990800
hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
PMID:17139257
we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
|
Q: Should the current ADRM1/Rpn13 GO annotation to proteasome regulatory particle, lid subcomplex be replaced by proteasome regulatory particle, base subcomplex in GOA/PAINT?
Suggested experts: Youdong Mao, Michael H. Glickman, Keiji Tanaka
Q: Should ADRM1 receive direct ubiquitin binding and deubiquitinase activator activity annotations in GOA to replace generic protein binding and endopeptidase activator activity?
Suggested experts: Kylie J. Walters, Alfred L. Goldberg, Keiji Tanaka
Experiment: Map endogenous ADRM1 contacts and cryo-EM density in substrate-engaged human 26S proteasomes, comparing wild-type ADRM1 with Pru-domain and DEUBAD-domain mutants for Rpn2, ubiquitin-chain, and UCHL5 association.
Hypothesis: Endogenous ADRM1 is a base/regulatory-particle ubiquitin receptor rather than a lid-subcomplex subunit.
Type: endogenous proteasome structural proteomics
Experiment: Rescue ADRM1-deficient cells with wild-type, ubiquitin-binding-defective, Rpn2-binding-defective, and UCHL5-binding-defective ADRM1 alleles, then quantify degradation of defined K48-ubiquitinated substrates and proteasome-associated UCHL5 activity.
Hypothesis: ADRM1 supports ubiquitin-dependent substrate degradation through both Pru-domain ubiquitin recognition and DEUBAD-dependent UCHL5 activation.
Type: catalytic-rescue degradation assay
Falcon deep research was attempted with just deep-research-falcon human ADRM1 --fallback
perplexity-lite. Falcon timed out after 600 seconds, and the configured fallback failed
with a Perplexity API 401 quota error. This manually curated summary is based on the
cached UniProt record, GOA, PN projection reports, and cached publications.
ADRM1 encodes proteasomal ubiquitin receptor ADRM1/Rpn13, a 407-aa human 19S
regulatory-particle protein. UniProt describes it as a component of the 26S proteasome
that functions as a proteasomal ubiquitin receptor and engages UCHL5/UCH37 during protein
degradation. The protein contains an N-terminal Pru domain and a C-terminal DEUBAD region.
Qiu et al. identified ADRM1/GP110 as human Rpn13, "a novel 46-kDa (407 residues) subunit
of its 19S regulatory complex" PMID:17139257. They report that "The C-terminal half of
hRpn13 binds directly to the proteasome-associated deubiquitinating enzyme, UCH37, and
enhances its isopeptidase activity" PMID:17139257. ADRM1 knockdown increased cellular
ubiquitin conjugates and decreased degradation of short-lived proteins, supporting a
direct role in ubiquitin-dependent proteasomal degradation PMID:17139257.
Hamazaki et al. independently identified Adrm1 as "a novel proteasome interacting protein
in mammalian cells" and found that hRpn13 recruits UCH37 to 26S proteasomes PMID:16990800.
The same abstract reports that hRpn13 knockdown caused loss of UCH37 proteins and decreased
deubiquitinating activity of 26S proteasomes PMID:16990800.
Husnjak et al. identified Rpn13/ADRM1 as a proteasomal ubiquitin receptor. They state that
"Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain" PMID:18497817. Chen et al. later showed that
hRpn13 binding to the hRpn2/PSMD1 scaffold activates ubiquitin binding and that adding
wild-type hRpn13 to hRpn13-deficient proteasomes strongly stimulated degradation of
ubiquitinated cyclin B PMID:20471946.
The Proteostasis PN projection places ADRM1 under ubiquitin-proteasome-system regulatory
particle/base and ubiquitin-binding proteasomal-subunit categories. The projected
GO:0000502 proteasome complex is already present in GOA and is safe. The projected
GO:0005838 proteasome regulatory particle is safe as an entailed broader term. The
projected GO:0008540 proteasome regulatory particle, base subcomplex is also supported:
Zhu et al. describe Rpn10 and Rpn13 as "the base subunits within the holoenzyme" involved
in ubiquitylated substrate recognition PMID:29636472. This supports modifying the
existing IBA GO:0008541 lid-subcomplex annotation to GO:0008540 base subcomplex.
Review started from just fetch-gene human ADRM1 for the Proteostasis PN batch. Falcon
deep research was requested with just deep-research-falcon human ADRM1 --fallback
perplexity-lite. Falcon timed out after 600 seconds, and the perplexity-lite fallback
failed with a Perplexity API 401 quota error. Because no provider file was produced, the
supporting synthesis was recorded in ADRM1-deep-research-manual.md.
ADRM1 encodes the human Rpn13 proteasomal ubiquitin receptor. Qiu et al. report that
"we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex"
and that "The C-terminal half of hRpn13 binds directly to the proteasome-associated
deubiquitinating enzyme, UCH37, and enhances its isopeptidase activity" PMID:17139257. Hamazaki et al. similarly describe "the identification of Adrm1 as a
novel proteasome interacting protein in mammalian cells" and report that "hRpn13
recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes"
PMID:16990800.
The direct molecular function should be captured with specific terms, not generic protein
binding. Husnjak et al. report that "Rpn13 binds ubiquitin through a conserved
amino-terminal region termed the pleckstrin-like receptor for ubiquitin (Pru) domain"
PMID:18497817. Chen et al.
state that "Rpn13 is a subunit of the proteasome that serves as a receptor for both
ubiquitin and Uch37" and that hRpn2/S1 binding activates hRpn13 for ubiquitin binding
PMID:20471946. Therefore, GO:0005515 protein binding rows should be
modified or marked over-annotated in favor of ubiquitin binding, proteasome binding, and
ubiquitin-specific protease binding/deubiquitinase activator functions.
PN projection assessment: ADRM1 is projected to GO:0000502 proteasome complex,
GO:0005838 proteasome regulatory particle, and GO:0008540 proteasome regulatory
particle, base subcomplex from the ubiquitin-proteasome-system PN categories. The broad
proteasome complex term is already in GOA and is acceptable. The regulatory-particle term
is entailed by existing proteasome/regulatory-particle evidence and is safe. The base
subcomplex projection is also supported: a structural review states that recognition of a
ubiquitylated substrate is mediated by "ubiquitin receptors Rpn10 and Rpn13, the base
subunits within the holoenzyme" PMID:29636472. This argues that the existing IBA annotation to GO:0008541 proteasome
regulatory particle, lid subcomplex should be modified to GO:0008540 rather than retained.
The broad process annotations should be handled conservatively. ADRM1 directly contributes
to proteasome-mediated ubiquitin-dependent protein catabolism: Qiu et al. report that
"Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates
and decreases the degradation of short-lived proteins" PMID:17139257, and Chen et al.
show that reconstituted hRpn13 stimulates degradation of ubiquitinated cyclin B
PMID:20471946. However, the oxidative-stress, type-I-interferon, synaptic-vesicle, and
RNA polymerase II transcription-elongation annotations are not direct ADRM1 core
functions based on the cached text. The transcription-elongation paper is cached only as
partial/abstract text and discusses human Elongator rather than ADRM1, so that annotation
is left undecided pending accessible full text PMID:11818576.
Annotation stance:
UPS|Proteasome and associated proteins|proteasome regulatory particle subunit|base, nonATPase|PRU, DEUBAD (row 1) and UPS|Ubiquitin and UBL binding|proteasomal subunits|regulatory particle|idiosyncratic Ub binding / PRU (row 2) ; PN-node mapping: type base, nonATPase=mapped→GO:0008540 base subcomplex (more_specific_than_existing_goa); group regulatory particle subunit=mapped→GO:0005838 regulatory particle; group proteasomal subunits=mapped→GO:0000502 proteasome complex (already_in_goa_exact); ub-binding classes=context_only.This file is generated from the current PROTEOSTASIS phase-1 dossier and local gene-review artifacts. Edit the source review, PN mapping, or dossier rather than this generated note when correcting the underlying curation.
id: Q16186
gene_symbol: ADRM1
product_type: PROTEIN
status: COMPLETE
taxon:
id: NCBITaxon:9606
label: Homo sapiens
description: ADRM1 encodes the human proteasomal ubiquitin receptor Rpn13, a 19S regulatory-particle subunit/cofactor
of the 26S proteasome. Its N-terminal Pru domain binds ubiquitin signals and the Rpn2/PSMD1 proteasome
scaffold, while its C-terminal DEUBAD region binds the UCHL5/UCH37 deubiquitinase. Through these interactions
ADRM1 helps recruit ubiquitinated substrates and coordinate deubiquitinase activity during proteasome-mediated
protein degradation in cytosolic and nuclear proteostasis.
existing_annotations:
- term:
id: GO:0008541
label: proteasome regulatory particle, lid subcomplex
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: part_of
review:
summary: The evidence supports ADRM1/Rpn13 as a 19S regulatory-particle ubiquitin receptor, but the
lid-subcomplex placement is less accurate for ADRM1 than the base-subcomplex placement used by the
PN projection.
action: MODIFY
reason: Modify to proteasome regulatory particle, base subcomplex. Primary and structural literature
describe Rpn13/ADRM1 as a 19S regulatory-particle subunit and as one of the base ubiquitin receptors;
this supports the PN base-subcomplex projection and argues against retaining the lid-subcomplex
term for ADRM1.
proposed_replacement_terms:
- id: GO:0008540
label: proteasome regulatory particle, base subcomplex
- id: GO:0005838
label: proteasome regulatory particle
additional_reference_ids:
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- reference_id: file:human/ADRM1/ADRM1-deep-research-manual.md
supporting_text: The Proteostasis PN projection is conservative for ADRM1; proteasome complex
and regulatory-particle terms are safe, and literature supports modifying the lid-subcomplex
annotation to the base subcomplex.
- term:
id: GO:0061133
label: endopeptidase activator activity
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: ADRM1 activates the proteasome-associated deubiquitinase UCHL5/UCH37, so the current endopeptidase
activator term is too generic and mechanistically imprecise.
action: MODIFY
reason: Modify to deubiquitinase activator activity. The cited evidence is about recruiting/activating
UCH37/UCHL5 deubiquitinating activity at 26S proteasomes, not a broad endopeptidase activator role.
proposed_replacement_terms:
- id: GO:0035800
label: deubiquitinase activator activity
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:16990800
supporting_text: loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0070628
label: proteasome binding
evidence_type: IBA
original_reference_id: GO_REF:0000033
qualifier: enables
review:
summary: ADRM1 binds/incorporates into the 26S proteasome regulatory particle through its Rpn13/Rpn2-associated
receptor role.
action: ACCEPT
reason: Accept as a direct molecular function. ADRM1 is a proteasome-associated ubiquitin receptor
and interacts with the proteasome scaffolding protein Rpn2/PSMD1; this is also consistent with the
PN regulatory-particle projection.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- term:
id: GO:0005634
label: nucleus
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005737
label: cytoplasm
evidence_type: IEA
original_reference_id: GO_REF:0000120
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16713569
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:16990800
qualifier: enables
review:
summary: This protein-binding evidence is real but should be represented by more specific proteasome
binding and UCHL5/UCH37 binding terms.
action: MODIFY
reason: Modify away from generic protein binding. The original evidence supports ADRM1 association
with proteasome subunits and the UCHL5/UCH37 deubiquitinase, which are better captured by proteasome
binding and ubiquitin-specific protease binding/deubiquitinase-regulator annotations.
proposed_replacement_terms:
- id: GO:0070628
label: proteasome binding
- id: GO:1990381
label: ubiquitin-specific protease binding
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:17139257
qualifier: enables
review:
summary: This protein-binding evidence is real but should be represented by more specific proteasome
binding and UCHL5/UCH37 binding terms.
action: MODIFY
reason: Modify away from generic protein binding. The original evidence supports ADRM1 association
with proteasome subunits and the UCHL5/UCH37 deubiquitinase, which are better captured by proteasome
binding and ubiquitin-specific protease binding/deubiquitinase-regulator annotations.
proposed_replacement_terms:
- id: GO:0070628
label: proteasome binding
- id: GO:1990381
label: ubiquitin-specific protease binding
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18497817
qualifier: enables
review:
summary: This protein-binding row captures direct ubiquitin/UBL-substrate receptor evidence and should
be replaced by ubiquitin binding.
action: MODIFY
reason: Modify to ubiquitin binding. Husnjak et al. identify Rpn13/ADRM1 as a proteasomal ubiquitin
receptor and map ubiquitin binding to the Pru domain; generic protein binding hides the informative
molecular function.
proposed_replacement_terms:
- id: GO:0043130
label: ubiquitin binding
additional_reference_ids:
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: Rpn13 functions as a ubiquitin receptor for the proteasome
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:18922472
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19490896
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:19615732
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:20059542
qualifier: enables
review:
summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit
interactions, but those should be represented with more specific terms.
action: MODIFY
reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly
recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is
too broad for curation.
proposed_replacement_terms:
- id: GO:0043130
label: ubiquitin binding
- id: GO:0070628
label: proteasome binding
additional_reference_ids:
- PMID:18497817
- PMID:20471946
- PMID:24811749
supported_by:
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- reference_id: PMID:24811749
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:21516116
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:24811749
qualifier: enables
review:
summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit
interactions, but those should be represented with more specific terms.
action: MODIFY
reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly
recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is
too broad for curation.
proposed_replacement_terms:
- id: GO:0043130
label: ubiquitin binding
- id: GO:0070628
label: proteasome binding
additional_reference_ids:
- PMID:18497817
- PMID:20471946
- PMID:24811749
supported_by:
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- reference_id: PMID:24811749
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:25416956
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:27107012
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:28514442
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31064842
qualifier: enables
review:
summary: This generic protein-binding annotation reflects ADRM1 receptor/shuttle-factor or proteasome-subunit
interactions, but those should be represented with more specific terms.
action: MODIFY
reason: Modify to more informative binding terms where the evidence supports them. ADRM1 directly
recognizes ubiquitin and associates with the proteasome/Rpn2 context; generic protein binding is
too broad for curation.
proposed_replacement_terms:
- id: GO:0043130
label: ubiquitin binding
- id: GO:0070628
label: proteasome binding
additional_reference_ids:
- PMID:18497817
- PMID:20471946
- PMID:24811749
supported_by:
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- reference_id: PMID:24811749
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:31515488
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:33961781
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0005515
label: protein binding
evidence_type: IPI
original_reference_id: PMID:40205054
qualifier: enables
review:
summary: This generic protein-binding annotation comes from interaction evidence, but generic protein
binding is uninformative for ADRM1.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. ADRM1 has specific, better-supported binding functions as a proteasomal
ubiquitin receptor, a proteasome/Rpn2-associated protein, and a UCHL5-binding deubiquitinase regulator.
Screen-derived or duplicate protein-binding rows should not be retained as core molecular functions.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18497817
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0000502
label: proteasome complex
evidence_type: NAS
original_reference_id: PMID:29636472
qualifier: part_of
review:
summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly
recovered in proteasome structural and biochemical studies.
action: ACCEPT
reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle
base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0000502
label: proteasome complex
evidence_type: NAS
original_reference_id: PMID:33729481
qualifier: part_of
review:
summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly
recovered in proteasome structural and biochemical studies.
action: ACCEPT
reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle
base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0000502
label: proteasome complex
evidence_type: NAS
original_reference_id: PMID:37228199
qualifier: part_of
review:
summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly
recovered in proteasome structural and biochemical studies.
action: ACCEPT
reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle
base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0005829
label: cytosol
evidence_type: NAS
original_reference_id: PMID:12032076
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0006979
label: response to oxidative stress
evidence_type: NAS
original_reference_id: PMID:35858375
qualifier: involved_in
review:
summary: The cited PA28-20S structural work does not provide ADRM1-specific oxidative-stress function.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. Proteasome capacity and ADRM1/Rpn13 autoubiquitination can respond
to proteotoxic stress, but the GOA-cited PA28-20S paper does not make ADRM1 a direct response-to-oxidative-stress
gene product.
additional_reference_ids:
- PMID:24811749
supported_by:
- reference_id: PMID:24811749
supporting_text: Rpn13 becomes extensively and selectively poly-ubiquitinated by the proteasome-associated
ubiquitin ligase, Ube3c/Hul5
- reference_id: PMID:24811749
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
- term:
id: GO:0008021
label: synaptic vesicle
evidence_type: NAS
original_reference_id: PMID:37228199
qualifier: located_in
review:
summary: The cited work supports free 19S regulatory particles near synapses, but not ADRM1 as a synaptic-vesicle
component.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. A 19S regulatory-particle pool at synapses is relevant proteasome
biology, but synaptic vesicle is too specific for ADRM1 without direct ADRM1-resolved localization
evidence.
additional_reference_ids:
- PMID:37228199
supported_by:
- reference_id: PMID:37228199
supporting_text: unexpected abundance of free 19S particles near synapses
- term:
id: GO:0010498
label: proteasomal protein catabolic process
evidence_type: NAS
original_reference_id: PMID:33729481
qualifier: involved_in
review:
summary: ADRM1 contributes to proteasomal protein catabolism by recognizing ubiquitinated substrates
as Rpn13 and supporting proteasome-associated UCHL5 activity.
action: ACCEPT
reason: Accept as a direct proteostasis process at an appropriate broad level. ADRM1 is not the protease
catalytic subunit, but its ubiquitin-receptor and UCHL5-regulatory roles are part of proteasomal
substrate processing.
additional_reference_ids:
- PMID:17139257
- PMID:18497817
- PMID:20471946
- PMID:33729481
supported_by:
- reference_id: PMID:17139257
supporting_text: Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates
and decreases the degradation of short-lived proteins
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated
cyclin B was strongly stimulated
- reference_id: PMID:33729481
supporting_text: Proteasomes are also vital for maintaining intracellular protein quality control
by removing misfolded or aggregate-prone damaged proteins
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: NAS
original_reference_id: PMID:19489727
qualifier: involved_in
review:
summary: ADRM1/Rpn13 functions in ubiquitin-dependent proteasomal degradation by binding ubiquitin
signals and supporting 26S proteasome substrate processing.
action: ACCEPT
reason: Accept as a core biological process. Multiple primary studies and reviews support ADRM1 as
a 26S proteasome ubiquitin receptor required for efficient degradation of ubiquitin conjugates.
additional_reference_ids:
- PMID:17139257
- PMID:18497817
- PMID:20471946
- PMID:33729481
supported_by:
- reference_id: PMID:17139257
supporting_text: Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates
and decreases the degradation of short-lived proteins
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated
cyclin B was strongly stimulated
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
evidence_type: NAS
original_reference_id: PMID:33729481
qualifier: involved_in
review:
summary: ADRM1/Rpn13 functions in ubiquitin-dependent proteasomal degradation by binding ubiquitin
signals and supporting 26S proteasome substrate processing.
action: ACCEPT
reason: Accept as a core biological process. Multiple primary studies and reviews support ADRM1 as
a 26S proteasome ubiquitin receptor required for efficient degradation of ubiquitin conjugates.
additional_reference_ids:
- PMID:17139257
- PMID:18497817
- PMID:20471946
- PMID:33729481
supported_by:
- reference_id: PMID:17139257
supporting_text: Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates
and decreases the degradation of short-lived proteins
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated
cyclin B was strongly stimulated
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0061136
label: regulation of proteasomal protein catabolic process
evidence_type: NAS
original_reference_id: PMID:12032076
qualifier: involved_in
review:
summary: ADRM1 regulates proteasomal protein catabolism through substrate-recognition and UCHL5-recruitment
mechanisms.
action: ACCEPT
reason: Accept. The term is broad, but it fits ADRM1/Rpn13 as a ubiquitin receptor and UCHL5 recruiter
whose loss or modification changes degradation of ubiquitin conjugates.
additional_reference_ids:
- PMID:17139257
- PMID:20471946
- PMID:24811749
supported_by:
- reference_id: PMID:17139257
supporting_text: Knockdown of hRpn13 in 293T cells increases the cellular levels of ubiquitin conjugates
and decreases the degradation of short-lived proteins
- reference_id: PMID:20471946
supporting_text: When wild-type hRpn13 was added to these proteasomes, the degradation of ubiquitinated
cyclin B was strongly stimulated
- reference_id: PMID:24811749
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
- term:
id: GO:0071357
label: cellular response to type I interferon
evidence_type: NAS
original_reference_id: PMID:31380390
qualifier: involved_in
review:
summary: The cited review discusses proteasome regulation in broad cellular contexts and does not
establish ADRM1 as a direct type-I-interferon response effector.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. Type-I-interferon biology can regulate proteasome composition/activity,
but ADRM1 should not receive a gene-level cellular response to type I interferon annotation from
this broad proteasome-regulation review.
additional_reference_ids:
- PMID:31380390
supported_by:
- reference_id: PMID:31380390
supporting_text: altered transcription of proteasomal subunits and activators
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: IDA
original_reference_id: GO_REF:0000052
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: IDA
original_reference_id: GO_REF:0000052
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005634
label: nucleus
evidence_type: EXP
original_reference_id: PMID:16990800
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005737
label: cytoplasm
evidence_type: EXP
original_reference_id: PMID:16990800
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-174058
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-187574
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-188191
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5635854
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-68825
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-69600
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8939801
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8952408
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9762096
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005654
label: nucleoplasm
evidence_type: TAS
original_reference_id: Reactome:R-NUL-9604648
qualifier: located_in
review:
summary: ADRM1-containing proteasomes are reported in the nucleus/nucleoplasm as part of the 26S proteasome
distribution.
action: ACCEPT
reason: Accept as a broad supported cellular location. Reactome nucleoplasm rows represent proteasome-catalyzed
degradation events in nuclear pathways rather than independent ADRM1 pathway functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1168640
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1234159
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1236970
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-1504193
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-174105
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-174202
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-174203
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-174255
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-180573
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-180603
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-209061
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-2130282
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-264458
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-353125
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-3640874
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-450466
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4608855
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4641256
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-4641260
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5362448
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5387392
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5607724
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5607731
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5610754
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5610758
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5610760
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5635868
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5658430
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5665854
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5665871
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5668481
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5668520
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5687112
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-5689539
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-68948
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-69016
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-75825
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8850992
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8852354
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8854044
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8854071
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8866553
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8866858
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8932355
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956140
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8956184
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-8957265
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9755303
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9755306
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9766223
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-983150
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9907980
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9908026
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9908178
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9929352
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9929486
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9931314
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9934893
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-HSA-9954728
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-212917
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-5610751
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0005829
label: cytosol
evidence_type: TAS
original_reference_id: Reactome:R-NUL-9011324
qualifier: located_in
review:
summary: ADRM1-containing 26S proteasomes act in cytosolic protein degradation, and independent localization
annotations also support cytosol/cytoplasm.
action: ACCEPT
reason: Accept as a broad supported cellular location. The many Reactome cytosol rows reflect placement
of the proteasome catalyst in substrate-degradation events; they should not be read as separate
substrate-specific ADRM1 functions.
additional_reference_ids:
- PMID:16990800
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:33729481
supporting_text: The 26S proteasome is the major proteasome species in eukaryotes, responsible for
proteolysis in the cytoplasm, in the nucleus
- term:
id: GO:0140678
label: molecular function inhibitor activity
evidence_type: EXP
original_reference_id: PMID:20471946
qualifier: enables
review:
summary: The evidence describes intramolecular/autoregulatory inhibition of free hRpn13 ubiquitin-receptor
activity by its C-terminal domain, not ADRM1 acting primarily as a standalone inhibitor.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. The autoinhibitory structural state is real, but the core function
of ADRM1 is proteasomal ubiquitin receptor/deubiquitinase regulator; proteasome docking activates
ubiquitin binding, so a broad inhibitor-activity annotation overstates the gene product role.
additional_reference_ids:
- PMID:20471946
supported_by:
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- reference_id: PMID:20471946
supporting_text: hRpn13's Uch37-binding domain can inhibit its activity as a ubiquitin receptor
- term:
id: GO:0000502
label: proteasome complex
evidence_type: IDA
original_reference_id: PMID:17323924
qualifier: part_of
review:
summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly
recovered in proteasome structural and biochemical studies.
action: ACCEPT
reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle
base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0061133
label: endopeptidase activator activity
evidence_type: IDA
original_reference_id: PMID:16990800
qualifier: enables
review:
summary: ADRM1 activates the proteasome-associated deubiquitinase UCHL5/UCH37, so the current endopeptidase
activator term is too generic and mechanistically imprecise.
action: MODIFY
reason: Modify to deubiquitinase activator activity. The cited evidence is about recruiting/activating
UCH37/UCHL5 deubiquitinating activity at 26S proteasomes, not a broad endopeptidase activator role.
proposed_replacement_terms:
- id: GO:0035800
label: deubiquitinase activator activity
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:16990800
supporting_text: loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- term:
id: GO:0002020
label: protease binding
evidence_type: IPI
original_reference_id: PMID:18922472
qualifier: enables
review:
summary: The original protease-binding row is specifically UCHL5/UCH37 binding and should use the
more informative ubiquitin-specific protease binding term.
action: MODIFY
reason: Modify to ubiquitin-specific protease binding. UCHL5/UCH37 is a proteasome-associated deubiquitinating
enzyme, and ADRM1 binds/recruits it through the C-terminal DEUBAD region.
proposed_replacement_terms:
- id: GO:1990381
label: ubiquitin-specific protease binding
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:18922472
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- reference_id: PMID:18922472
supporting_text: The conserved DUB Uch37 is found on proteasomes
- reference_id: PMID:20471946
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
- term:
id: GO:0070628
label: proteasome binding
evidence_type: IDA
original_reference_id: PMID:18162577
qualifier: enables
review:
summary: ADRM1 binds/incorporates into the 26S proteasome regulatory particle through its Rpn13/Rpn2-associated
receptor role.
action: ACCEPT
reason: Accept as a direct molecular function. ADRM1 is a proteasome-associated ubiquitin receptor
and interacts with the proteasome scaffolding protein Rpn2/PSMD1; this is also consistent with the
PN regulatory-particle projection.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:20471946
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:20471946
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
- term:
id: GO:0000502
label: proteasome complex
evidence_type: IDA
original_reference_id: PMID:16990800
qualifier: part_of
review:
summary: ADRM1 is a component of the 26S proteasome/regulatory-particle complex and is repeatedly
recovered in proteasome structural and biochemical studies.
action: ACCEPT
reason: Accept. Although the more precise PN-supported complex placement is the regulatory-particle
base subcomplex, proteasome complex is a true broader cellular-component annotation for ADRM1.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
- PMID:29636472
- PMID:33729481
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated
ubiquitin tag on the substrate
- term:
id: GO:0006368
label: transcription elongation by RNA polymerase II
evidence_type: IMP
original_reference_id: PMID:11818576
qualifier: involved_in
review:
summary: The cached abstract for the cited Elongator paper does not connect ADRM1 to RNA polymerase
II transcription elongation, but this is an IMP (experimental) annotation whose full text is not available.
action: UNDECIDED
reason: This is an experimental (IMP) annotation citing PMID:11818576, which is abstract-only in our cache
(full_text_available:false), so the supporting evidence cannot be verified. Per project guidelines,
unverifiable experimental annotations should be UNDECIDED rather than REMOVE. Biologically the annotation
is implausible - ADRM1/Rpn13 is a 26S proteasome ubiquitin receptor and is not a subunit of the human
Elongator complex (ELP1-6); its supported role is proteasomal ubiquitin recognition and UCHL5/UCH37
regulation. Flagged for a curator with full-text access to confirm mis-attribution before removal.
additional_reference_ids:
- PMID:11818576
supported_by:
- reference_id: PMID:11818576
supporting_text: human Elongator facilitates transcription by RNA polymerase II
- term:
id: GO:0043248
label: proteasome assembly
evidence_type: IDA
original_reference_id: PMID:16990800
qualifier: involved_in
review:
summary: ADRM1 is recruited to 26S proteasomes and recruits UCHL5, but the cited evidence does not
clearly show a proteasome assembly process role.
action: MARK_AS_OVER_ANNOTATED
reason: Mark as over-annotated. The evidence supports proteasome binding/base-subcomplex membership
and UCHL5 recruitment. It does not show ADRM1 catalyzing or directing proteasome assembly as a core
biological process.
additional_reference_ids:
- PMID:16990800
- PMID:17139257
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
references:
- id: GO_REF:0000033
title: Annotation inferences using phylogenetic trees
findings: []
- id: GO_REF:0000052
title: Gene Ontology annotation based on curation of immunofluorescence data
findings: []
- id: GO_REF:0000120
title: Combined Automated Annotation using Multiple IEA Methods
findings: []
- id: PMID:11818576
title: Human Elongator facilitates RNA polymerase II transcription through chromatin.
findings:
- statement: The paper supports human Elongator in RNA polymerase II transcription through chromatin,
not an ADRM1/Rpn13 role.
supporting_text: human Elongator facilitates transcription by RNA polymerase II in a chromatin- and
acetyl-CoA-dependent manner
reference_section_type: ABSTRACT
- id: PMID:12032076
title: Properties of the hybrid form of the 26S proteasome containing both 19S and PA28 complexes.
findings: []
- id: PMID:16713569
title: A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell
degeneration.
findings: []
- id: PMID:16990800
title: A novel proteasome interacting protein recruits the deubiquitinating enzyme UCH37 to 26S proteasomes.
findings:
- statement: ADRM1/Rpn13 is a mammalian proteasome-interacting protein that recruits UCH37 to 26S
proteasomes.
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
reference_section_type: ABSTRACT
- statement: ADRM1/Rpn13 depletion reduces proteasome-associated UCH37 and deubiquitinating activity.
supporting_text: loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
reference_section_type: ABSTRACT
- id: PMID:17139257
title: hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37.
findings:
- statement: ADRM1/Rpn13 is a 407-residue subunit of the human 19S regulatory complex.
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
reference_section_type: ABSTRACT
- statement: ADRM1/Rpn13 binds UCH37 and enhances its isopeptidase activity.
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
reference_section_type: ABSTRACT
- id: PMID:17323924
title: Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.
findings: []
- id: PMID:18162577
title: Relative structural and functional roles of multiple deubiquitylating proteins associated with
mammalian 26S proteasome.
findings: []
- id: PMID:18497817
title: Proteasome subunit Rpn13 is a novel ubiquitin receptor.
findings:
- statement: ADRM1/Rpn13 is a proteasomal ubiquitin receptor whose Pru domain binds ubiquitin.
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
reference_section_type: ABSTRACT
- id: PMID:18922472
title: Distinct modes of regulation of the Uch37 deubiquitinating enzyme in the proteasome and in the
Ino80 chromatin-remodeling complex.
findings: []
- id: PMID:19489727
title: Recognition and processing of ubiquitin-protein conjugates by the proteasome.
findings: []
- id: PMID:19490896
title: Assembly pathway of the Mammalian proteasome base subcomplex is mediated by multiple specific
chaperones.
findings: []
- id: PMID:19615732
title: Defining the human deubiquitinating enzyme interaction landscape.
findings: []
- id: PMID:20059542
title: Cross-species divergence of the major recognition pathways of ubiquitylated substrates for ubiquitin/26S
proteasome-mediated proteolysis.
findings: []
- id: PMID:20471946
title: Structure of proteasome ubiquitin receptor hRpn13 and its activation by the scaffolding protein
hRpn2.
findings:
- statement: Human Rpn13 serves as a receptor for both ubiquitin and Uch37.
supporting_text: Rpn13 is a subunit of the proteasome that serves as a receptor for both ubiquitin
and Uch37
reference_section_type: ABSTRACT
- statement: hRpn2/S1 binding activates hRpn13 for ubiquitin binding.
supporting_text: hRpn13 binding to the proteasome scaffolding protein hRpn2/S1 abrogates its interdomain
interactions, thus activating hRpn13 for ubiquitin binding
reference_section_type: ABSTRACT
- id: PMID:21516116
title: Next-generation sequencing to generate interactome datasets.
findings: []
- id: PMID:24811749
title: Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates.
findings:
- statement: Rpn13 ubiquitination reduces the proteasome's ability to bind and degrade ubiquitin-conjugated
proteins.
supporting_text: Rpn13 ubiquitination strongly decreases the proteasome's ability to bind and degrade
ubiquitin-conjugated proteins
reference_section_type: ABSTRACT
- id: PMID:25416956
title: A proteome-scale map of the human interactome network.
findings: []
- id: PMID:27107012
title: Pooled-matrix protein interaction screens using Barcode Fusion Genetics.
findings: []
- id: PMID:28514442
title: Architecture of the human interactome defines protein communities and disease networks.
findings: []
- id: PMID:29636472
title: Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated
human 26S proteasome.
findings: []
- id: PMID:31064842
title: Phosphorylation of Tyr-950 in the proteasome scaffolding protein RPN2 modulates its interaction
with the ubiquitin receptor RPN13.
findings: []
- id: PMID:31380390
title: Regulation of Proteasome Activity by (Post-)transcriptional Mechanisms.
findings: []
- id: PMID:31515488
title: Extensive disruption of protein interactions by genetic variants across the allele frequency
spectrum in human populations.
findings: []
- id: PMID:33729481
title: 'Proteasome in action: substrate degradation by the 26S proteasome.'
findings: []
- id: PMID:33961781
title: Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
findings: []
- id: PMID:35858375
title: Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification
of endogenous proteins.
findings: []
- id: PMID:37228199
title: An abundance of free regulatory (19S) proteasome particles regulates neuronal synapses.
findings: []
- id: PMID:40205054
title: Multimodal cell maps as a foundation for structural and functional genomics.
findings: []
- id: Reactome:R-HSA-1168640
title: Ubiquitinated IkB is degraded
findings: []
- id: Reactome:R-HSA-1234159
title: Proteasome proteolyzes ub-HIF-alpha
findings: []
- id: Reactome:R-HSA-1236970
title: Proteasomal clevage of exogenous antigen (26S proteasome catalyst)
findings: []
- id: Reactome:R-HSA-1504193
title: Ubiquitinated DVL is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-174058
title: Degradation of multiubiquitinated Cdh1
findings: []
- id: Reactome:R-HSA-174105
title: Degradation of multiubiquitinated cell cycle proteins
findings: []
- id: Reactome:R-HSA-174202
title: Degradation of multiubiquitinated Securin
findings: []
- id: Reactome:R-HSA-174203
title: SCF-mediated degradation of Emi1
findings: []
- id: Reactome:R-HSA-174255
title: Degradation multiubiquitinated Cyclin A
findings: []
- id: Reactome:R-HSA-180573
title: Degradation of ubiquitinated CD4
findings: []
- id: Reactome:R-HSA-180603
title: Proteosome-mediated degradation of APOBEC3G
findings: []
- id: Reactome:R-HSA-187574
title: Degradation of ubiquitinated p27/p21 by the 26S proteasome
findings: []
- id: Reactome:R-HSA-188191
title: APC/C:Cdh1-mediated degradation of Skp2
findings: []
- id: Reactome:R-HSA-209061
title: Ubiquitinated and phosphorylated IKBA binds to and is degraded by the proteasome complex
findings: []
- id: Reactome:R-HSA-2130282
title: Degradation of ubiquitinated beta catenin by the proteasome
findings: []
- id: Reactome:R-HSA-264458
title: Proteasome mediated degradation of COP1
findings: []
- id: Reactome:R-HSA-353125
title: 26S proteosome degrades ODC holoenzyme complex
findings: []
- id: Reactome:R-HSA-3640874
title: Ub-RibC-AXIN is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-450466
title: AUF1:mRNA complex is degraded
findings: []
- id: Reactome:R-HSA-4608855
title: PRICKLE1 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-4641256
title: Ubiquitinated AXIN is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-4641260
title: Ubiquitinated DVL1 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5362448
title: Hh C-terminal fragments are degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5387392
title: processing defective Hh variants are degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5607724
title: 26S proteasome processes K48PolyUb-K21,22-p-S32,36-IkBA:NF-kB complex to form NF-kB complex
findings: []
- id: Reactome:R-HSA-5607731
title: 26S proteasome processes p-7S-p100:RELB to form p52:RELB
findings: []
- id: Reactome:R-HSA-5610754
title: GLI3 is partially degraded by the proteasome to yield the GLI3 repressor
findings: []
- id: Reactome:R-HSA-5610758
title: GLI1 is degraded by the proteasome after ubiquitination by beta-TrCP
findings: []
- id: Reactome:R-HSA-5610760
title: GLI1 is degraded by the proteasome after ubiquitination by ITCH
findings: []
- id: Reactome:R-HSA-5635854
title: GLI2,3 are degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5635868
title: ub-GLI is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5658430
title: NF1 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-5665854
title: ADRM1:26S proteaseome binds UCHL5
findings: []
- id: Reactome:R-HSA-5665871
title: ADRM1 binds 26S proteasome
findings: []
- id: Reactome:R-HSA-5668481
title: Protesomal degradation of K48polyUb-TRAF3
findings: []
- id: Reactome:R-HSA-5668520
title: 26Sproteasome degrades K48polyUb-NIK
findings: []
- id: Reactome:R-HSA-5687112
title: MAPK6 is degraded by the 26S proteasome
findings: []
- id: Reactome:R-HSA-5689539
title: ADRM1:26S proteaseome binds USP14
findings: []
- id: Reactome:R-HSA-68825
title: Ubiquitinated geminin is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-68948
title: Ubiquitinated Orc1 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-69016
title: Ubiquitinated Cdc6 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-69600
title: Proteolytic degradation of ubiquitinated-Cdc25A
findings: []
- id: Reactome:R-HSA-75825
title: Proteasome mediated degradation of Cyclin D1
findings: []
- id: Reactome:R-HSA-8850992
title: Proteasome degrades polyubiquitinated PTEN
findings: []
- id: Reactome:R-HSA-8852354
title: GTSE1 facilitates proteasome-mediated degradation of TP53
findings: []
- id: Reactome:R-HSA-8854044
title: Proteasome degrades AURKA ubiquitinated by SCF-FBXL7
findings: []
- id: Reactome:R-HSA-8854071
title: Proteasome-mediated degradation of PolyUb-FBXL7
findings: []
- id: Reactome:R-HSA-8866553
title: misfolded CFTR is degraded by the 26S proteasome
findings: []
- id: Reactome:R-HSA-8866858
title: CFTR F508del is degraded by the 26S proteasome
findings: []
- id: Reactome:R-HSA-8932355
title: 26S proteasome degrades Ub-NFE2L2
findings: []
- id: Reactome:R-HSA-8939801
title: 26S proteasome degrades PolyUb-RUNX2
findings: []
- id: Reactome:R-HSA-8952408
title: Polyubiquitinated RUNX3 is degraded by the proteasome
findings: []
- id: Reactome:R-HSA-8956140
title: NEDD8 and UBD bind NUB1 and the 26S proteasome
findings: []
- id: Reactome:R-HSA-8956184
title: 26S- and NUB1-mediated degradation of NEDD8, UBD and their conjugates
findings: []
- id: Reactome:R-HSA-8957265
title: 26S proteasome degrades TP73 polyubiquitinated by ITCH
findings: []
- id: Reactome:R-HSA-9755303
title: 26S proteasome degrades HIFalpha
findings: []
- id: Reactome:R-HSA-9755306
title: ub UBXN7 is degraded by the 26S proteasome
findings: []
- id: Reactome:R-HSA-9762096
title: Ub,pS335,S338,T NFE2L2 is degraded
findings: []
- id: Reactome:R-HSA-9766223
title: Proteasome-dependent degradation of ubiquitinated CDH1
findings: []
- id: Reactome:R-HSA-983150
title: Proteasomal cleavage of substrate
findings: []
- id: Reactome:R-HSA-9907980
title: Formation of the 19S regulatory particle base precursor
findings: []
- id: Reactome:R-HSA-9908026
title: Formation of the 19S regulatory particle precursor
findings: []
- id: Reactome:R-HSA-9908178
title: Formation of the 26S proteasome
findings: []
- id: Reactome:R-HSA-9929352
title: Ubiquitinated CD274 is degraded by the 26S proteasome
findings: []
- id: Reactome:R-HSA-9929486
title: SPOP-mediated degradation of CD274 by 26S Proteosome
findings: []
- id: Reactome:R-HSA-9931314
title: Proteasomal degradation of polyUb-p-S195-CD274
findings: []
- id: Reactome:R-HSA-9934893
title: Proteolysis of K48polyUb-K,p-S-PER1,2,3
findings: []
- id: Reactome:R-HSA-9954728
title: The proteasome degrades the K48-polyubiquitinated alanine-tailed nascent peptide
findings: []
- id: Reactome:R-NUL-212917
title: Proteasome mediated degradation of PAK-2p34
findings: []
- id: Reactome:R-NUL-5610751
title: Gli2is degraded by the proteasome
findings: []
- id: Reactome:R-NUL-9011324
title: Proteasome degrades SAX-3 ubiquitinated by EBAX-1
findings: []
- id: Reactome:R-NUL-9604648
title: Proteasome degrades ubiquitinated mouse NICD4
findings: []
- id: file:human/ADRM1/ADRM1-notes.md
title: ADRM1 PN review notes
findings: []
- id: file:human/ADRM1/ADRM1-deep-research-manual.md
title: ADRM1 manual deep research
findings: []
- id: file:projects/PROTEOSTASIS/reports/pn_projection/pn_projected_annotations.tsv
title: Proteostasis PN projected annotations
findings: []
core_functions:
- description: Proteasomal ubiquitin receptor activity within the 19S regulatory particle, linking ubiquitin-tagged
substrates to the 26S proteasome for degradation.
molecular_function:
id: GO:0043130
label: ubiquitin binding
directly_involved_in:
- id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
- id: GO:0010498
label: proteasomal protein catabolic process
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005654
label: nucleoplasm
in_complex:
id: GO:0008540
label: proteasome regulatory particle, base subcomplex
supported_by:
- reference_id: PMID:18497817
supporting_text: Rpn13 binds ubiquitin through a conserved amino-terminal region termed the pleckstrin-like
receptor for ubiquitin (Pru) domain
- reference_id: PMID:20471946
supporting_text: Rpn13 functions as a ubiquitin receptor for the proteasome
- reference_id: PMID:33729481
supporting_text: Three of these integral subunits (Rpn1, Rpn10 and Rpn13) bind to the conjugated ubiquitin
tag on the substrate
- description: Recruitment and activation of the UCHL5/UCH37 deubiquitinase at the 26S proteasome regulatory
particle.
molecular_function:
id: GO:0035800
label: deubiquitinase activator activity
directly_involved_in:
- id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005654
label: nucleoplasm
in_complex:
id: GO:0008540
label: proteasome regulatory particle, base subcomplex
supported_by:
- reference_id: PMID:16990800
supporting_text: hRpn13 recruits UCH37, a deubiquitinating enzyme known to associate with 26 proteasomes
- reference_id: PMID:16990800
supporting_text: loss of UCH37 proteins and decrease in deubiquitinating activity of 26S proteasomes
- reference_id: PMID:17139257
supporting_text: The C-terminal half of hRpn13 binds directly to the proteasome-associated deubiquitinating
enzyme, UCH37, and enhances its isopeptidase activity
- description: Stable association with the 19S regulatory-particle/base proteasome subcomplex through
Rpn2/PSMD1 and related regulatory-particle contacts.
molecular_function:
id: GO:0070628
label: proteasome binding
directly_involved_in:
- id: GO:0043161
label: proteasome-mediated ubiquitin-dependent protein catabolic process
locations:
- id: GO:0005829
label: cytosol
- id: GO:0005654
label: nucleoplasm
in_complex:
id: GO:0008540
label: proteasome regulatory particle, base subcomplex
supported_by:
- reference_id: PMID:16990800
supporting_text: we describe the identification of Adrm1 as a novel proteasome interacting protein
in mammalian cells
- reference_id: PMID:17139257
supporting_text: we discovered a novel 46-kDa (407 residues) subunit of its 19S regulatory complex
- reference_id: PMID:29636472
supporting_text: Recognition of a ubiquitylated substrate is mediated principally by ubiquitin receptors
Rpn10 and Rpn13, the base subunits within the holoenzyme
proposed_new_terms: []
suggested_questions:
- question: Should the current ADRM1/Rpn13 GO annotation to proteasome regulatory particle, lid subcomplex
be replaced by proteasome regulatory particle, base subcomplex in GOA/PAINT?
experts:
- Youdong Mao
- Michael H. Glickman
- Keiji Tanaka
- question: Should ADRM1 receive direct ubiquitin binding and deubiquitinase activator activity annotations
in GOA to replace generic protein binding and endopeptidase activator activity?
experts:
- Kylie J. Walters
- Alfred L. Goldberg
- Keiji Tanaka
suggested_experiments:
- experiment_type: endogenous proteasome structural proteomics
hypothesis: Endogenous ADRM1 is a base/regulatory-particle ubiquitin receptor rather than a lid-subcomplex
subunit.
description: Map endogenous ADRM1 contacts and cryo-EM density in substrate-engaged human 26S proteasomes,
comparing wild-type ADRM1 with Pru-domain and DEUBAD-domain mutants for Rpn2, ubiquitin-chain, and
UCHL5 association.
- experiment_type: catalytic-rescue degradation assay
hypothesis: ADRM1 supports ubiquitin-dependent substrate degradation through both Pru-domain ubiquitin
recognition and DEUBAD-dependent UCHL5 activation.
description: Rescue ADRM1-deficient cells with wild-type, ubiquitin-binding-defective, Rpn2-binding-defective,
and UCHL5-binding-defective ADRM1 alleles, then quantify degradation of defined K48-ubiquitinated
substrates and proteasome-associated UCHL5 activity.