LGALS3

UniProt ID: P17931
Organism: Homo sapiens
Review Status: DRAFT
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Gene Description

Galectin-3 (Mac-2, CBP35, IgE-binding protein) is the only chimera-type member of the galectin family of beta-galactoside-binding lectins. It comprises a single C-terminal carbohydrate-recognition domain (CRD), which binds beta-galactosides such as lactose and N-acetyllactosamine (LacNAc), joined to an intrinsically disordered, proline/glycine-rich N-terminal tail. Although the protein is monomeric, the N-terminal tail mediates concentration-dependent self-association and liquid-liquid phase separation, giving galectin-3 functional multivalency so that it cross-links glycoconjugates into ordered lattices and agglutinates glycosylated cells and particles. Galectin-3 acts both intracellularly and extracellularly. Inside the cell it is found in the cytoplasm and nucleus (where it has been implicated as a pre-mRNA splicing factor and RNA-binding protein) and, together with TRIM16, it senses ruptured endo/lysosomal membranes by recognizing newly exposed luminal glycans and helps mobilize the autophagy machinery. It reaches the cell surface and extracellular space through a non-classical, TMED10-facilitated secretory route. Extracellularly it modulates cell adhesion, cross-links cell-surface glycoproteins (including branched N-glycans generated by GnT-V), acts as a chemoattractant for monocytes and macrophages, regulates T-cell, NK-cell and innate-lymphoid-cell activation and apoptosis, and contributes to inflammation, fibrosis and tumor biology. Its high-resolution CRD structure and beta-galactoside specificity make it a prominent drug target.

Proposed New Ontology Terms

galectin-glycan lattice assembly

Definition: The process of cross-linking multivalent glycoconjugates (glycoproteins and glycolipids) on a cell surface or in the extracellular matrix into an ordered, higher-order lattice by a galectin, regulating the residence time, clustering, and signaling of the cross-linked glycoproteins.

Justification: Galectin-3 (and other galectins) form 'galectin-glycan lattices' that retain receptors at the cell surface and modulate their endocytosis and signaling. Current GO terms (carbohydrate binding, molecular condensate scaffold activity, negative regulation of endocytosis, positive regulation of protein localization to plasma membrane) only capture facets of this distinctive, well-described mechanism, with no single term for the lattice assembly process itself.

Supporting Evidence:

damaged endomembrane glycan sensor activity

Definition: Binding to luminal glycans that become exposed on the cytosolic face of ruptured endosomal or lysosomal membranes, marking the damaged compartment for autophagic clearance.

Justification: Galectin-3 (with TRIM16) senses ruptured endo/lysosomal membranes by recognizing newly exposed luminal glycans and mobilizes the autophagy machinery (lysophagy). This glycan-damage-sensing role is mechanistically distinct from generic carbohydrate binding and is increasingly central to galectin-3 biology, but is not represented by a dedicated MF term.

Supporting Evidence:

Existing Annotations Review

GO Term Evidence Action Reason
GO:0031012 extracellular matrix
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 is secreted and functions extracellularly, cross-linking ECM glycoproteins (e.g. laminin) into lattices. Extracellular matrix as a site of action is consistent with the lectin/lattice function, though it is a downstream/extracellular role rather than the gene's primary intracellular biology.
Reason: Well-supported extracellular site of action via phylogenetic inference, but a pleiotropic extracellular localization rather than a core defining feature.
GO:0048030 disaccharide binding
IBA
GO_REF:0000033
ACCEPT
Summary: Galectin-3 binds beta-galactoside disaccharides such as lactose and LacNAc through its CRD. This is a more specific child of carbohydrate binding and accurately captures the core lectin activity.
Reason: Disaccharide (beta-galactoside) binding is phylogenetically conserved and central to galectin-3 function; well supported experimentally.
Supporting Evidence:
PMID:11434930
Recognized by its specificity for galactose, a detailed characterization of its sugar binding ability has been investigated by isothermal titration calorimetry.
GO:0005634 nucleus
IBA
GO_REF:0000033
ACCEPT
Summary: Galectin-3 is present and active in the nucleus (implicated as a pre-mRNA splicing factor and RNA-binding protein). Nuclear localization is well established experimentally and by phylogenetic inference.
Reason: Nuclear localization is a conserved, experimentally corroborated feature of galectin-3.
Supporting Evidence:
PMID:12070075
galectin-3 was identified as a component of a nuclear and cytoplasmic complex, the survival of motor neuron complex, through its interaction with Gemin4.
GO:0005737 cytoplasm
IBA
GO_REF:0000033
ACCEPT
Summary: Galectin-3 is predominantly cytoplasmic in many cell types, with roles in endomembrane-damage sensing and anti-apoptotic signaling. Cytoplasmic localization is well supported.
Reason: Cytoplasmic localization is conserved and experimentally corroborated.
Supporting Evidence:
PMID:12070075
Shuttling of galectin-3 between the nucleus and cytoplasm.
GO:0050918 positive chemotaxis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 acts as a chemoattractant for monocytes/macrophages, a downstream immune-modulatory consequence of its extracellular lectin activity. Real but pleiotropic.
Reason: Phylogenetically inferred chemoattractant role corroborated experimentally (PMID:10925302), but a downstream process rather than the core molecular function.
Supporting Evidence:
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes and macrophages.
GO:0001772 immunological synapse
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 localizes to the immunological synapse where it negatively regulates TCR signaling. A specialized site of action, downstream of the lattice function.
Reason: Specialized cell-type-specific site of action; supported but not core to the gene's general function.
Supporting Evidence:
PMID:19706535
Galectin-3 was recruited to the cytoplasmic side of the immunological synapse (IS) in activated T cells.
GO:0002548 monocyte chemotaxis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Monocyte chemotaxis is a documented downstream immune activity (PMID:10925302). Pleiotropic, not core.
Reason: Real but downstream immune process; redundant with the experimental IDA annotation.
Supporting Evidence:
PMID:10925302
galectin-3 induced human monocyte migration in vitro in a dose-dependent manner, and it was chemotactic at high concentrations (1.0 microM) but chemokinetic at low concentrations (10-100 nM).
GO:0019863 IgE binding
IBA
GO_REF:0000033
ACCEPT
Summary: Galectin-3 was originally identified and named as the "IgE-binding protein"; IgE binding is the historical defining activity and a specific glycan-mediated manifestation of the core carbohydrate-binding function. Accepted as core, consistent with the IDA IgE-binding annotation and the accepted disaccharide-binding (GO:0048030) core function.
Reason: Historical defining activity ("IgE-binding protein"); a specific manifestation of the core CRD glycan-binding function, kept consistent with the IDA annotation.
Supporting Evidence:
PMID:8347574
IgE-binding protein (epsilon BP) was originally identified in rat basophilic leukemia (RBL) cells by virtue of its affinity for IgE.
GO:0030593 neutrophil chemotaxis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 promotes neutrophil chemotaxis/adhesion in inflammation. Downstream immune role.
Reason: Pleiotropic downstream immune process.
Supporting Evidence:
PMID:11823514
Role of galectin-3 as an adhesion molecule for neutrophil extravasation during streptococcal pneumonia.
GO:0043236 laminin binding
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 binds laminin (a heavily glycosylated ECM glycoprotein) via its CRD; historically named laminin-binding protein. A specific glycan-dependent binding event.
Reason: A specific glycoprotein-binding facet of the core lectin function.
Supporting Evidence:
PMID:2332426
The major non-integrin laminin binding protein of macrophages is identical to carbohydrate binding protein 35 (Mac-2).
GO:0045806 negative regulation of endocytosis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 lattices retain glycoproteins at the cell surface and reduce their endocytosis (e.g. at the immunological synapse, PMID:19706535). Downstream consequence of lattice formation.
Reason: Downstream regulatory effect of surface-lattice formation; not a core function.
GO:0048245 eosinophil chemotaxis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 promotes eosinophil chemotaxis in allergic inflammation. Downstream immune role.
Reason: Pleiotropic downstream immune process.
Supporting Evidence:
PMID:23576987
allergen-challenged mice deficient in Gal-3 (Gal-3(-/-)) exhibit decreased airway recruitment of eosinophils (Eos)
GO:0048246 macrophage chemotaxis
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 chemoattracts macrophages (PMID:10925302). Downstream immune role.
Reason: Pleiotropic downstream immune process; redundant with experimental IDA.
Supporting Evidence:
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes and macrophages.
GO:0090280 positive regulation of calcium ion import
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 triggers a Ca2+ influx in monocytes at high concentrations (PMID:10925302), a signaling consequence of receptor cross-linking. Downstream effect.
Reason: Downstream signaling consequence of lattice/receptor cross-linking; not core.
Supporting Evidence:
PMID:10925302
Galectin-3 caused a Ca2+ influx in monocytes at high, but not low, concentrations, and both lactose and PTX inhibited this response.
GO:2001237 negative regulation of extrinsic apoptotic signaling pathway
IBA
GO_REF:0000033
KEEP AS NON CORE
Summary: Galectin-3 has anti-apoptotic activity (Bcl-2-like, NWGR motif; PMID:8692888, PMID:22761016). A pleiotropic, context-dependent process.
Reason: Real but pleiotropic apoptosis-regulatory role; not the core molecular function.
GO:0005576 extracellular region
IEA
GO_REF:0000044
KEEP AS NON CORE
Summary: Galectin-3 is secreted via a non-classical route and is abundant extracellularly. Localization is correct but downstream of intracellular biology.
Reason: Correct secreted localization (SubCell mapping), pleiotropic extracellular site.
GO:0005634 nucleus
IEA
GO_REF:0000044
ACCEPT
Summary: Nuclear localization, consistent with the experimental IDA and IBA annotations.
Reason: Correct nuclear localization corroborated by multiple experimental annotations.
GO:0005737 cytoplasm
IEA
GO_REF:0000044
ACCEPT
Summary: Cytoplasmic localization, consistent with experimental IDA/IBA annotations.
Reason: Correct cytoplasmic localization corroborated by multiple experimental annotations.
GO:0007165 signal transduction
IEA
GO_REF:0000108
MARK AS OVER ANNOTATED
Summary: This is an extremely general term auto-inferred from the receptor-ligand-activity annotation. It conveys little about galectin-3's actual function and is far less informative than the specific immune-modulatory and lectin activities.
Reason: Uninformative high-level BP term derived by inter-ontology inference; better captured by specific processes.
GO:0030246 carbohydrate binding
IEA
GO_REF:0000120
ACCEPT
Summary: Carbohydrate binding is the core molecular function of galectin-3. The IEA annotation is fully consistent with extensive experimental and structural data.
Reason: Correct core molecular function; redundant with experimental EXP/TAS annotations.
GO:0042129 regulation of T cell proliferation
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA-predicted; galectin-3 does modulate T-cell growth (PMID:8692888). Real but pleiotropic and also captured by the experimental IMP annotation.
Reason: Pleiotropic immune process; redundant with experimental annotation.
GO:0046636 negative regulation of alpha-beta T cell activation
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA-predicted; consistent with negative regulation of TCR signaling at the synapse (PMID:19706535). Pleiotropic immune process.
Reason: Pleiotropic downstream immune regulation; supported but not core.
GO:0048018 receptor ligand activity
IEA
GO_REF:0000117
MARK AS OVER ANNOTATED
Summary: ARBA-predicted generic receptor ligand activity. For galectin-3 the experimentally supported activity is specifically an inhibitory ligand of NKp30 (GO:0141069, IDA); generic receptor ligand activity is less precise and partly conflicts with the inhibitory role.
Reason: Less precise than the experimentally supported receptor ligand inhibitor activity; generic prediction.
GO:0070232 regulation of T cell apoptotic process
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA-predicted; consistent with the experimental IDA annotation (PMID:8692888). Pleiotropic immune process.
Reason: Pleiotropic immune process; redundant with experimental annotation.
GO:0071677 positive regulation of mononuclear cell migration
IEA
GO_REF:0000117
KEEP AS NON CORE
Summary: ARBA-predicted; consistent with the experimental chemotaxis annotation (PMID:10925302). Downstream immune process.
Reason: Pleiotropic downstream immune process; redundant with experimental annotation.
GO:0005515 protein binding
IPI
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
MARK AS OVER ANNOTATED
Summary: A generic protein-binding (IPI) record recording a physical interaction from PMID:19706535. Generic protein binding is uninformative per curation guidelines and conveys no specific functional information about galectin-3. The informative molecular function is its carbohydrate/galactoside binding, with most partner contacts being glycan-mediated; this generic protein-binding term does not capture an annotated function and the specific physical-interaction details are better recorded elsewhere.
Reason: Generic protein binding conveys no specific functional information; the informative MF is carbohydrate binding.
GO:0005515 protein binding
IPI
PMID:20812334
Matrilysin-1 (MMP7) cleaves galectin-3 and inhibits wound he...
MARK AS OVER ANNOTATED
Summary: Interaction with MMP7 (which cleaves galectin-3). Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:21712812
A novel strategy for evasion of NK cell immunity by tumours ...
MARK AS OVER ANNOTATED
Summary: Interaction with MICA in the context of NK-cell evasion. Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:2402511
Molecular cloning of a human macrophage lectin specific for ...
MARK AS OVER ANNOTATED
Summary: From the original cloning paper (here the AHSG/fetuin-A interaction). Generic protein binding is uninformative; the paper's value is establishing the galactose-specific lectin identity.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:24945728
Modulation of CD6 function through interaction with Galectin...
MARK AS OVER ANNOTATED
Summary: Interaction with CD6 (PMID:24945728). Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:25315772
Tumor-released Galectin-3, a soluble inhibitory ligand of hu...
MARK AS OVER ANNOTATED
Summary: Interaction with NKp30/NCR3 as a soluble inhibitory ligand. The informative MF is receptor ligand inhibitor activity (GO:0141069), not generic protein binding.
Reason: Generic protein binding; better captured by receptor ligand inhibitor activity.
GO:0005515 protein binding
IPI
PMID:25416956
A proteome-scale map of the human interactome network.
MARK AS OVER ANNOTATED
Summary: High-throughput interactome screen. Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005515 protein binding
IPI
PMID:28514442
Architecture of the human interactome defines protein commun...
MARK AS OVER ANNOTATED
Summary: High-throughput interactome screen. Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005515 protein binding
IPI
PMID:29427412
Galectin-3 Interacts with the CHI3L1 Axis and Contributes to...
MARK AS OVER ANNOTATED
Summary: Interaction with the CHI3L1/IL13RA2 axis. Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:31515488
Extensive disruption of protein interactions by genetic vari...
MARK AS OVER ANNOTATED
Summary: Interaction-disruption-by-variant screen. Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005515 protein binding
IPI
PMID:31540324
Endoglin Protein Interactome Profiling Identifies TRIM21 and...
MARK AS OVER ANNOTATED
Summary: Interaction with endoglin (ENG). Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005515 protein binding
IPI
PMID:32296183
A reference map of the human binary protein interactome.
MARK AS OVER ANNOTATED
Summary: High-throughput binary interactome screen. Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005515 protein binding
IPI
PMID:32915505
Structural Characterization of N-Linked Glycans in the Recep...
MARK AS OVER ANNOTATED
Summary: Interaction with SARS-CoV-2 spike glycoprotein, a glycan-mediated lectin contact. Generic protein binding is uninformative; the activity is carbohydrate (glycan) binding.
Reason: Generic protein binding; the underlying activity is glycan recognition.
GO:0005515 protein binding
IPI
PMID:33961781
Dual proteome-scale networks reveal cell-specific remodeling...
MARK AS OVER ANNOTATED
Summary: High-throughput interactome screen. Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005515 protein binding
IPI
PMID:40205054
Multimodal cell maps as a foundation for structural and func...
MARK AS OVER ANNOTATED
Summary: High-throughput cell-map interactome study (ALCAM interaction). Generic protein binding is uninformative.
Reason: Generic protein binding from a high-throughput screen; not informative.
GO:0005654 nucleoplasm
IDA
GO_REF:0000052
ACCEPT
Summary: HPA immunofluorescence places galectin-3 in the nucleoplasm, consistent with its established nuclear localization.
Reason: Specific, experimentally supported nuclear sub-localization.
GO:0005829 cytosol
IDA
GO_REF:0000052
ACCEPT
Summary: HPA immunofluorescence places galectin-3 in the cytosol, consistent with its established cytoplasmic localization.
Reason: Specific, experimentally supported cytosolic localization.
GO:0005576 extracellular region
EXP
PMID:32272059
A Translocation Pathway for Vesicle-Mediated Unconventional ...
KEEP AS NON CORE
Summary: Galectin-3 is secreted via the TMED10-facilitated non-classical pathway into the extracellular region. Experimentally supported but downstream localization.
Reason: Correct secreted localization; pleiotropic extracellular site of action.
GO:0005737 cytoplasm
EXP
PMID:32272059
A Translocation Pathway for Vesicle-Mediated Unconventional ...
ACCEPT
Summary: Cytoplasmic pool of galectin-3 is the substrate for non-classical secretion via TMED10 (PMID:32272059). Consistent with established cytoplasmic localization.
Reason: Experimentally supported cytoplasmic localization.
GO:0004864 protein phosphatase inhibitor activity
IDA
PMID:24846175
β1,6 GlcNAc branches-modified PTPRT attenuates its activity ...
MARK AS OVER ANNOTATED
Summary: In PMID:24846175 galectin-3 binds branched N-glycans on the phosphatase PTPRT and promotes its dimerization, which indirectly reduces PTPRT catalytic activity. This is a glycan-lattice effect on receptor clustering, not a direct allosteric/competitive phosphatase-inhibitor molecular function.
Reason: The effect on phosphatase activity is indirect (via glycan-mediated dimerization), not a direct enzyme-inhibitor molecular function.
Supporting Evidence:
PMID:24846175
GnT-V overexpression enhances galectin-3's cell-surface retention and promotes PTPRT's dimerization mediated by galectin-3. Increased dimerization subsequently reduces PTPRT's catalytic activity
GO:0005576 extracellular region
IDA
PMID:26582946
Group 2 Innate Lymphoid Cells Express Functional NKp30 Recep...
KEEP AS NON CORE
Summary: Secreted galectin-3 acts extracellularly as an inhibitory ligand of NKp30 on ILC2 (PMID:26582946). Experimentally supported extracellular site of action.
Reason: Correct extracellular site of action; pleiotropic immune context.
GO:0051134 negative regulation of NK T cell activation
IDA
PMID:26582946
Group 2 Innate Lymphoid Cells Express Functional NKp30 Recep...
KEEP AS NON CORE
Summary: Galectin-3 blocks NKp30-B7-H6 activation (PMID:26582946), inhibiting NK/ILC2 activation. Downstream immune-modulatory process.
Reason: Real but pleiotropic downstream immune process.
Supporting Evidence:
PMID:26582946
This interaction can be blocked by NKp30 blocking Ab and an inhibitory ligand, galectin-3.
GO:0141069 receptor ligand inhibitor activity
IDA
PMID:26582946
Group 2 Innate Lymphoid Cells Express Functional NKp30 Recep...
ACCEPT
Summary: Galectin-3 acts as a soluble inhibitory ligand of the NKp30 (NCR3) receptor, blocking its activation by B7-H6 (PMID:26582946, PMID:25315772). This is a specific, experimentally supported molecular function.
Reason: Specific, experimentally supported molecular function (inhibitory NKp30 ligand).
Supporting Evidence:
PMID:26582946
This interaction can be blocked by NKp30 blocking Ab and an inhibitory ligand, galectin-3.
GO:0030246 carbohydrate binding
EXP
PMID:28973299
Novel polysaccharide binding to the N-terminal tail of galec...
ACCEPT
Summary: NMR mapping (PMID:28973299) demonstrates carbohydrate binding at two CRD sites and a novel N-terminal-tail site. This is the core molecular function of galectin-3.
Reason: Direct experimental evidence for the core carbohydrate-binding molecular function.
Supporting Evidence:
PMID:28973299
epitopes for binding to three sites on 15N-labeled Gal-3, two within its carbohydrate recognition domain (CRD) and one at a novel site within the NT
GO:0140693 molecular condensate scaffold activity
IDA
PMID:28893908
The intrinsically disordered N-terminal domain of galectin-3...
ACCEPT
Summary: The disordered N-terminal domain drives multisite self-association and liquid-liquid phase separation (PMID:28893908), the molecular basis of galectin-3's multivalency and lattice/condensate formation. A core, distinctive molecular function.
Reason: Experimentally supported; underpins galectin-3's distinctive lattice/condensate behavior.
Supporting Evidence:
PMID:28893908
galectin-3 can also undergo liquid-liquid phase separation
GO:0140693 molecular condensate scaffold activity
IDA
PMID:32144274
Liquid-liquid phase separation and extracellular multivalent...
ACCEPT
Summary: Galectin-3's N-terminal domain undergoes LLPS and bridges/aggregates glycosylated molecules (PMID:32144274), explaining its extracellular agglutination function. Supports the condensate-scaffold/lattice activity.
Reason: Experimentally supported condensate-scaffold/lattice activity.
Supporting Evidence:
PMID:32144274
its N-terminal domain (NTD) undergoes LLPS driven by interactions between its aromatic residues
GO:0031334 positive regulation of protein-containing complex assembly
IDA
PMID:24846175
β1,6 GlcNAc branches-modified PTPRT attenuates its activity ...
KEEP AS NON CORE
Summary: Galectin-3 promotes glycan-dependent dimerization of PTPRT (PMID:24846175), an instance of promoting receptor complex assembly via lattice formation. A downstream consequence of the lattice function.
Reason: Downstream consequence of glycan-lattice formation; not a core function in itself.
Supporting Evidence:
PMID:24846175
promotes PTPRT's dimerization mediated by galectin-3
GO:0031012 extracellular matrix
HDA
PMID:28327460
Comprehensive proteomic characterization of stem cell-derive...
KEEP AS NON CORE
Summary: High-throughput proteomic detection of galectin-3 in stem-cell-derived ECM. Localization-by-detection, consistent with secretion.
Reason: Proteomics colocalization; consistent with secreted galectin-3 but not a functional or core annotation.
GO:0019903 protein phosphatase binding
IPI
PMID:24846175
β1,6 GlcNAc branches-modified PTPRT attenuates its activity ...
KEEP AS NON CORE
Summary: Galectin-3 binds the phosphatase PTPRT (PMID:24846175). This is a glycan-mediated contact; more informatively captured by carbohydrate binding, but a specific documented partner.
Reason: Specific documented interaction; glycan-mediated and downstream of lectin activity.
GO:1903078 positive regulation of protein localization to plasma membrane
IDA
PMID:24846175
β1,6 GlcNAc branches-modified PTPRT attenuates its activity ...
KEEP AS NON CORE
Summary: Galectin-3 lattices retain glycoproteins (e.g. PTPRT) at the cell surface, prolonging plasma-membrane residence (PMID:24846175). Downstream consequence of lattice formation.
Reason: Downstream consequence of surface-lattice formation; not a core function.
Supporting Evidence:
PMID:24846175
addition of β1,6 GlcNAc branches on PTPRT prolongs PTPRT's cell-surface retention time
GO:0009986 cell surface
ISS
GO_REF:0000024
KEEP AS NON CORE
Summary: Galectin-3 associates with the cell surface after non-classical secretion, where it forms glycan lattices. Cell-surface localization is consistent with its extracellular lattice function.
Reason: Correct extracellular/cell-surface site of action; pleiotropic.
GO:0031012 extracellular matrix
HDA
PMID:28675934
Characterization of the Extracellular Matrix of Normal and D...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in tissue ECM. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0031012 extracellular matrix
HDA
PMID:25037231
Extracellular matrix signatures of human primary metastatic ...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in colon cancer ECM. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0005576 extracellular region
HDA
PMID:27068509
Extracellular matrix remodelling in response to venous hyper...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in varicose-vein ECM. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0031012 extracellular matrix
HDA
PMID:27559042
Glycoproteomics Reveals Decorin Peptides With Anti-Myostatin...
KEEP AS NON CORE
Summary: Glycoproteomic detection of galectin-3 in atrial-fibrillation tissue ECM. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0031012 extracellular matrix
HDA
PMID:20551380
Proteomics characterization of extracellular space component...
KEEP AS NON CORE
Summary: Proteomic characterization of aortic extracellular space detected galectin-3. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0030667 secretory granule membrane
TAS
Reactome:R-HSA-6798743
KEEP AS NON CORE
Summary: Reactome places galectin-3 at the secretory (specific) granule membrane in the context of neutrophil degranulation. Consistent with packaging for secretion in neutrophils; specialized cell-type context.
Reason: Cell-type-specific granule localization from pathway annotation; not core.
GO:0101003 ficolin-1-rich granule membrane
TAS
Reactome:R-HSA-6800426
KEEP AS NON CORE
Summary: Reactome places galectin-3 at the ficolin-1-rich granule membrane in neutrophil degranulation. Specialized cell-type context.
Reason: Cell-type-specific granule localization from pathway annotation; not core.
GO:2001200 positive regulation of dendritic cell differentiation
IDA NOT
PMID:16116184
Galectin-9 induces maturation of human monocyte-derived dend...
ACCEPT
Summary: This is a NOT annotation. PMID:16116184 shows galectin-9 (not galectin-3) induces dendritic-cell maturation; galectin-3 lacks this activity. The negated annotation correctly records the absence of this function for galectin-3.
Reason: Correctly recorded negative (NOT) annotation distinguishing galectin-3 from galectin-9.
GO:0070062 extracellular exosome
HDA
PMID:23533145
In-depth proteomic analyses of exosomes isolated from expres...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in urinary/prostatic-secretion exosomes. Localization-by-detection, consistent with secretion.
Reason: Proteomics localization; consistent with secretion but not core or functional.
GO:0016020 membrane
HDA
PMID:19946888
Defining the membrane proteome of NK cells.
MARK AS OVER ANNOTATED
Summary: NK-cell membrane proteome detection. Very general localization-by-detection term.
Reason: Extremely general localization from a proteomics screen; uninformative.
GO:0005634 nucleus
IDA
PMID:7682704
Decreased expression of Mac-2 (carbohydrate binding protein ...
ACCEPT
Summary: Direct experimental evidence of nuclear localization of galectin-3 (Mac-2/CBP35) in colonic epithelium (PMID:7682704). Core localization.
Reason: Direct experimental evidence for nuclear localization.
GO:0050860 negative regulation of T cell receptor signaling pathway
ISS
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
KEEP AS NON CORE
Summary: Transferred from mouse ortholog (P16110); galectin-3 negatively regulates TCR signaling at the synapse. Pleiotropic downstream immune regulation.
Reason: Pleiotropic downstream immune-regulatory process (ortholog transfer).
GO:2000521 negative regulation of immunological synapse formation
ISS
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
KEEP AS NON CORE
Summary: Transferred from mouse ortholog; galectin-3 limits TCR clustering at the synapse. Pleiotropic downstream immune process.
Reason: Pleiotropic downstream immune process (ortholog transfer).
GO:2001189 negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell
ISS
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
KEEP AS NON CORE
Summary: Transferred from mouse ortholog; a highly specific child term of the negative TCR regulation role. Pleiotropic downstream immune process.
Reason: Pleiotropic, highly specific downstream immune process (ortholog transfer).
GO:0042129 regulation of T cell proliferation
IMP
PMID:8692888
Expression of galectin-3 modulates T-cell growth and apoptos...
KEEP AS NON CORE
Summary: Galectin-3 overexpression increases T-cell growth rates (PMID:8692888), an experimentally supported but pleiotropic immune process.
Reason: Pleiotropic immune process supported by experimental evidence.
Supporting Evidence:
PMID:8692888
Transfectants expressing galectin-3 displayed higher growth rates than control transfectants
GO:0005737 cytoplasm
IDA
PMID:9447709
Detection and distribution of the carbohydrate binding prote...
ACCEPT
Summary: Direct detection of cytoplasmic galectin-3 in notochord/intervertebral disc tissue (PMID:9447709). Core localization.
Reason: Direct experimental evidence for cytoplasmic localization.
GO:0001772 immunological synapse
IDA
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
KEEP AS NON CORE
Summary: Galectin-3 localizes to the immunological synapse where it down-regulates TCR signaling (PMID:19706535). Specialized site of action.
Reason: Specialized cell-type-specific site of action; not core.
GO:0002548 monocyte chemotaxis
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 chemoattracts monocytes (PMID:10925302), blocked by lactose and a CRD fragment, via a PTX-sensitive pathway. Downstream immune process.
Reason: Real but pleiotropic downstream immune process.
Supporting Evidence:
PMID:10925302
galectin-3 is a novel chemoattractant for monocytes and macrophages
GO:0005634 nucleus
IDA
PMID:22761016
Downregulation of galectin-3 by EGF mediates the apoptosis o...
ACCEPT
Summary: Galectin-3 detected in the nucleus (PMID:22761016). Consistent with established nuclear localization.
Reason: Experimentally supported nuclear localization.
GO:0005737 cytoplasm
IDA
PMID:22761016
Downregulation of galectin-3 by EGF mediates the apoptosis o...
ACCEPT
Summary: Cytoplasmic galectin-3 mediates anti-apoptotic activity; EGF suppresses cytoplasmic galectin-3 to permit apoptosis (PMID:22761016). Consistent with cytoplasmic localization.
Reason: Experimentally supported cytoplasmic localization.
Supporting Evidence:
PMID:22761016
High concentrations of EGF suppressed cytoplasmic expression of galectin-3
GO:0019863 IgE binding
IDA
PMID:2261464
Human IgE-binding protein: a soluble lectin exhibiting a hig...
ACCEPT
Summary: Galectin-3 was originally identified and named as the "IgE-binding protein," so IgE binding is the historical defining activity of this gene product. It is a direct manifestation of the CRD's beta-galactoside / glycan-binding activity (the core molecular function), recognizing IgE glycoforms via its lectin domain. Because it is a specific, directly demonstrated (IDA) instance of the core carbohydrate-binding activity, it is accepted as core, consistent with the IBA disaccharide-binding (GO:0048030) annotation being accepted as core.
Reason: Historical defining activity of galectin-3 ("IgE-binding protein"); a specific, experimentally demonstrated manifestation of the core CRD glycan-binding function, consistent with treating the underlying beta-galactoside/glycan recognition as core.
GO:0030593 neutrophil chemotaxis
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 promotes neutrophil chemotaxis (PMID:10925302). Downstream immune process.
Reason: Real but pleiotropic downstream immune process.
GO:0042056 chemoattractant activity
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 functions as a chemoattractant for monocytes/macrophages (PMID:10925302). This is an experimentally supported molecular function, mediated by its lectin/lattice activity at the cell surface. Real but a specialized immune-context activity.
Reason: Experimentally supported but specialized immune-context molecular function, downstream of the core lectin activity.
Supporting Evidence:
PMID:10925302
galectin-3 induced human monocyte migration in vitro in a dose-dependent manner
GO:0045806 negative regulation of endocytosis
IDA
PMID:19706535
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell act...
KEEP AS NON CORE
Summary: Galectin-3 lattices reduce receptor endocytosis at the immunological synapse (PMID:19706535). Downstream consequence of surface-lattice formation.
Reason: Downstream consequence of lattice formation; not core.
GO:0048245 eosinophil chemotaxis
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 promotes eosinophil chemotaxis (PMID:10925302). Downstream immune process.
Reason: Real but pleiotropic downstream immune process.
GO:0048246 macrophage chemotaxis
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 chemoattracts macrophages (PMID:10925302). Downstream immune process.
Reason: Real but pleiotropic downstream immune process.
Supporting Evidence:
PMID:10925302
Cultured human macrophages and alveolar macrophages also migrated toward galectin-3
GO:0050918 positive chemotaxis
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 drives positive chemotaxis of myeloid cells (PMID:10925302). Downstream immune process; redundant parent of the specific chemotaxis terms.
Reason: Pleiotropic downstream immune process.
GO:0070232 regulation of T cell apoptotic process
IDA
PMID:8692888
Expression of galectin-3 modulates T-cell growth and apoptos...
KEEP AS NON CORE
Summary: Galectin-3 expression confers resistance to apoptosis in T cells (PMID:8692888). Pleiotropic immune/apoptosis process.
Reason: Pleiotropic downstream immune/apoptosis process.
Supporting Evidence:
PMID:8692888
galectin-3 expression in these cells confers resistance to apoptosis induced by anti-Fas antibody and staurosporine
GO:0071674 mononuclear cell migration
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 induces mononuclear cell (monocyte) migration (PMID:10925302). Downstream immune process.
Reason: Pleiotropic downstream immune process.
GO:0071677 positive regulation of mononuclear cell migration
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 positively regulates mononuclear cell migration (PMID:10925302). Downstream immune process.
Reason: Pleiotropic downstream immune process.
GO:0090280 positive regulation of calcium ion import
IDA
PMID:10925302
Human galectin-3 is a novel chemoattractant for monocytes an...
KEEP AS NON CORE
Summary: Galectin-3 induces Ca2+ influx in monocytes at high concentrations (PMID:10925302). Downstream signaling consequence of receptor cross-linking.
Reason: Downstream signaling consequence; not core.
Supporting Evidence:
PMID:10925302
Galectin-3 caused a Ca2+ influx in monocytes at high, but not low, concentrations
GO:1902041 regulation of extrinsic apoptotic signaling pathway via death domain receptors
IMP
PMID:8692888
Expression of galectin-3 modulates T-cell growth and apoptos...
KEEP AS NON CORE
Summary: Galectin-3 confers resistance to Fas (death-receptor)-induced apoptosis in T cells (PMID:8692888). Pleiotropic apoptosis-regulatory process.
Reason: Pleiotropic downstream apoptosis-regulatory process.
Supporting Evidence:
PMID:8692888
confers resistance to apoptosis induced by anti-Fas antibody and staurosporine
GO:2001237 negative regulation of extrinsic apoptotic signaling pathway
IDA
PMID:22761016
Downregulation of galectin-3 by EGF mediates the apoptosis o...
KEEP AS NON CORE
Summary: Cytoplasmic galectin-3 has anti-apoptotic activity; its downregulation by EGF permits apoptosis (PMID:22761016). Pleiotropic apoptosis-regulatory process.
Reason: Pleiotropic downstream apoptosis-regulatory process.
Supporting Evidence:
PMID:22761016
overexpression of galectin-3 could reduce EGF-induced apoptosis in HepG2 cells
GO:0003723 RNA binding
HDA
PMID:22658674
Insights into RNA biology from an atlas of mammalian mRNA-bi...
KEEP AS NON CORE
Summary: Galectin-3 was captured in a high-throughput mRNA-interactome screen (PMID:22658674) and has a proposed nuclear pre-mRNA splicing role. RNA binding is plausible but rests on a proteome-wide capture rather than a dedicated functional assay.
Reason: Plausible nuclear RNA-associated role from a high-throughput screen; not a core, directly demonstrated molecular function.
GO:0043236 laminin binding
IDA
PMID:2402511
Molecular cloning of a human macrophage lectin specific for ...
KEEP AS NON CORE
Summary: Galectin-3 binds laminin (PMID:2402511); historically named laminin-binding protein. A specific glycoprotein-binding facet of the core lectin function.
Reason: Specific glycoprotein-binding facet of the core lectin function.
GO:0030855 epithelial cell differentiation
IEP
PMID:21492153
Analysis of proteomic changes induced upon cellular differen...
KEEP AS NON CORE
Summary: Galectin-3 expression changes during Caco-2 enterocyte differentiation (PMID:21492153), an IEP (expression-pattern) correlation rather than a direct functional assay. Pleiotropic, correlative.
Reason: Correlative expression-pattern (IEP) evidence; pleiotropic developmental process.
GO:0005576 extracellular region
HDA
PMID:22664934
Comparison of tear protein levels in breast cancer patients ...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in tears. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0005576 extracellular region
HDA
PMID:23580065
Shotgun proteomics reveals specific modulated protein patter...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in tears (glaucoma study). Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0070062 extracellular exosome
HDA
PMID:19199708
Proteomic analysis of human parotid gland exosomes by multid...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in parotid-gland exosomes. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0070062 extracellular exosome
HDA
PMID:19056867
Large-scale proteomics and phosphoproteomics of urinary exos...
KEEP AS NON CORE
Summary: Proteomic detection of galectin-3 in urinary exosomes. Localization-by-detection.
Reason: Proteomics localization consistent with secretion; not core.
GO:0005886 plasma membrane
TAS
Reactome:R-HSA-6798743
KEEP AS NON CORE
Summary: Reactome places galectin-3 at the plasma membrane in the neutrophil-degranulation pathway. Consistent with cell-surface association after secretion.
Reason: Cell-surface association from pathway annotation; not core.
GO:0005886 plasma membrane
TAS
Reactome:R-HSA-6800426
KEEP AS NON CORE
Summary: Reactome plasma-membrane annotation (ficolin-rich granule pathway). Consistent with cell-surface association.
Reason: Cell-surface association from pathway annotation; not core.
GO:0005886 plasma membrane
TAS
Reactome:R-HSA-8938382
KEEP AS NON CORE
Summary: Reactome plasma-membrane annotation (RUNX-regulated expression pathway). Consistent with cell-surface association after secretion.
Reason: Cell-surface association from pathway annotation; not core.
GO:0005515 protein binding
IPI
PMID:19016746
Identification of mitochondrial F(1)F(0)-ATP synthase intera...
MARK AS OVER ANNOTATED
Summary: Interaction with mitochondrial F1F0-ATP synthase in colon cancer cells. Generic protein binding is uninformative.
Reason: Generic protein binding; not an informative molecular function.
GO:0005743 mitochondrial inner membrane
IDA
PMID:19016746
Identification of mitochondrial F(1)F(0)-ATP synthase intera...
KEEP AS NON CORE
Summary: A single study (PMID:19016746) reports galectin-3 at the mitochondrial inner membrane via interaction with F1F0-ATP synthase in colon cancer cells. This is an unusual, context-specific localization not corroborated by the broader literature (cytoplasm/nucleus/secreted), so it is treated as non-core.
Reason: Single-study, context-specific localization not corroborated by the broader literature; retained but non-core.
GO:0005634 nucleus
IDA
PMID:14961764
Nucling mediates apoptosis by inhibiting expression of galec...
ACCEPT
Summary: Galectin-3 detected in the nucleus (PMID:14961764). Consistent with established nuclear localization.
Reason: Experimentally supported nuclear localization.
GO:0005737 cytoplasm
IDA
PMID:14961764
Nucling mediates apoptosis by inhibiting expression of galec...
ACCEPT
Summary: Galectin-3 detected in the cytoplasm (PMID:14961764). Consistent with established cytoplasmic localization.
Reason: Experimentally supported cytoplasmic localization.
GO:0030246 carbohydrate binding
TAS
PMID:9162064
Strikingly different localization of galectin-3 and galectin...
ACCEPT
Summary: Carbohydrate binding, the core molecular function, asserted by a primary study (PMID:9162064). Redundant with the EXP/IEA carbohydrate-binding annotations.
Reason: Core molecular function; well supported.
GO:0005886 plasma membrane
TAS
PMID:9162064
Strikingly different localization of galectin-3 and galectin...
KEEP AS NON CORE
Summary: Galectin-3 associates with the plasma membrane / cell surface (PMID:9162064), consistent with its extracellular lattice function after secretion.
Reason: Cell-surface association; consistent with secreted lattice function but not core.
GO:0062093 lysophagy
IDA
PMID:32521192
MERIT, a cellular system coordinating lysosomal repair, remo...
NEW
Summary: Cytosolic galectin-3 detects lysosomal membrane rupture by binding luminal glycans newly exposed to the cytosol, recruits and organizes ESCRT components (PDCD6IP/ALIX, CHMP4A, CHMPB) for membrane repair, and at later stages cooperates with TRIM16 to engage the autophagy machinery (ATG16L1, ATG13, LC3) in selective autophagic removal of severely damaged lysosomes (PMID:32521192, PMID:27693506). This glycan-damage-sensing lysophagy role is among the strongest intracellular functions of galectin-3 and is not currently represented in GOA; it is added here as a NEW annotation. The same machinery also mediates galectin-3-dependent secretory autophagy of alpha-synuclein after vesicular damage (PMID:34612142).
Reason: Strongly supported intracellular function (damaged-endomembrane glycan sensing leading to ESCRT repair and TRIM16-dependent lysophagy) that is absent from the existing GOA annotations; added as a core glycan-sensing process.
Supporting Evidence:
PMID:32521192
LGALS3 (galectin 3) detects membrane damage by detecting exposed lumenal glycosyl groups, recruits and organizes ESCRT components PDCD6IP/ALIX, CHMP4A, and CHMPB at damaged sites on the lysosomes, and facilitates ESCRT-driven repair of lysosomal membrane. At later stages, LGALS3 cooperates with TRIM16, an autophagy receptor-regulator, to engage autophagy machinery in removal of excessively damaged lysosomes.
PMID:32521192
The capacity of LGALS3 to recognize glycans is required to initiate autophagy in response to lysosomal damage.

Core Functions

Beta-galactoside / N-acetyllactosamine binding by the C-terminal carbohydrate recognition domain (CRD). This is the defining, evolutionarily conserved molecular function of galectin-3 and the basis for essentially all of its downstream biology.

Molecular Function:
carbohydrate binding
Supporting Evidence:
  • PMID:28973299
    epitopes for binding to three sites on 15N-labeled Gal-3, two within its carbohydrate recognition domain (CRD) and one at a novel site within the NT
  • PMID:2402511
    hMac-2 synthesized in vitro is recognized by the M3/38 monoclonal antibody to Mac-2 and binds to the desialylated glycoprotein asialofetuin and to laminin, a major component of basement membranes

Galactoside-specific recognition (lactose / LacNAc), the precise specificity of the galectin-3 CRD, the basis of its beta-galactoside specificity.

Molecular Function:
galactoside binding
Supporting Evidence:
  • PMID:9582341
    We report here the x-ray crystal structure of the human galectin-3 CRD, in complex with lactose and N-acetyllactosamine, at 2.1-A resolution

Self-association and liquid-liquid phase separation driven by the intrinsically disordered N-terminal tail, which gives the monomeric galectin-3 functional multivalency and lets it scaffold glycoconjugate lattices/condensates and agglutinate (bridge) glycosylated cells and particles. This lattice-forming activity is the distinctive feature of galectin-3 relative to other galectins.

Supporting Evidence:
  • PMID:28893908
    galectin-3 can also undergo liquid-liquid phase separation
  • PMID:32144274
    its N-terminal domain (NTD) undergoes LLPS driven by interactions between its aromatic residues
  • PMID:41194217
    mutations in key residues that confer the liquid-liquid phase separation (LLPS) properties of Galectin-3 abrogates its mitochondrial relocalization, ULK1 recruitment, and mitophagy, suggesting that the capacity to form biomolecular condensates around the damaged mitochondria is crucial for the mitophagy function of Galectin-3

Glycan-based sensing of damaged endomembranes. Cytosolic galectin-3 uses its carbohydrate-recognition activity to detect ruptured endo/lysosomal membranes by binding luminal beta-galactoside glycans that become exposed on the cytosolic face, thereby marking the damaged compartment and mobilizing membrane repair (ESCRT) and selective autophagy (TRIM16-dependent lysophagy). This is a major intracellular role of galectin-3 and is mechanistically built on the same CRD carbohydrate-binding activity. (No dedicated 'damaged-endomembrane glycan sensor' MF term exists in GO; the role is represented here by the core carbohydrate-binding MF, with the lysophagy process captured in existing_annotations as GO:0062093.)

Molecular Function:
carbohydrate binding
Cellular Locations:
Supporting Evidence:
  • PMID:32521192
    LGALS3 (galectin 3) detects membrane damage by detecting exposed lumenal glycosyl groups
  • PMID:32521192
    The capacity of LGALS3 to recognize glycans is required to initiate autophagy in response to lysosomal damage.

References

Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Annotation inferences using phylogenetic trees
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
Gene Ontology annotation based on curation of immunofluorescence data
Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Electronic Gene Ontology annotations created by ARBA machine learning models
Combined Automated Annotation using Multiple IEA Methods
Human galectin-3 is a novel chemoattractant for monocytes and macrophages.
Nucling mediates apoptosis by inhibiting expression of galectin-3 through interference with nuclear factor kappaB signalling.
Galectin-9 induces maturation of human monocyte-derived dendritic cells.
Identification of mitochondrial F(1)F(0)-ATP synthase interacting with galectin-3 in colon cancer cells.
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology (MudPIT).
Galectin-3 negatively regulates TCR-mediated CD4+ T-cell activation at the immunological synapse.
Defining the membrane proteome of NK cells.
Proteomics characterization of extracellular space components in the human aorta.
Matrilysin-1 (MMP7) cleaves galectin-3 and inhibits wound healing in intestinal epithelial cells.
Analysis of proteomic changes induced upon cellular differentiation of the human intestinal cell line Caco-2.
A novel strategy for evasion of NK cell immunity by tumours expressing core2 O-glycans.
Human IgE-binding protein: a soluble lectin exhibiting a highly conserved interspecies sequence and differential recognition of IgE glycoforms.
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Comparison of tear protein levels in breast cancer patients and healthy controls using a de novo proteomic approach.
Downregulation of galectin-3 by EGF mediates the apoptosis of HepG2 cells.
In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.
Shotgun proteomics reveals specific modulated protein patterns in tears of patients with primary open angle glaucoma naïve to therapy.
Molecular cloning of a human macrophage lectin specific for galactose.
β1,6 GlcNAc branches-modified PTPRT attenuates its activity and promotes cell migration by STAT3 pathway.
Modulation of CD6 function through interaction with Galectin-1 and -3.
Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.
Tumor-released Galectin-3, a soluble inhibitory ligand of human NKp30, plays an important role in tumor escape from NK cell attack.
A proteome-scale map of the human interactome network.
Group 2 Innate Lymphoid Cells Express Functional NKp30 Receptor Inducing Type 2 Cytokine Production.
Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins.
Glycoproteomics Reveals Decorin Peptides With Anti-Myostatin Activity in Human Atrial Fibrillation.
TRIMs and Galectins Globally Cooperate and TRIM16 and Galectin-3 Co-direct Autophagy in Endomembrane Damage Homeostasis.
Comprehensive proteomic characterization of stem cell-derived extracellular matrices.
Architecture of the human interactome defines protein communities and disease networks.
Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.
The intrinsically disordered N-terminal domain of galectin-3 dynamically mediates multisite self-association of the protein through fuzzy interactions.
Novel polysaccharide binding to the N-terminal tail of galectin-3 is likely modulated by proline isomerization.
Galectin-3 Interacts with the CHI3L1 Axis and Contributes to Hermansky-Pudlak Syndrome Lung Disease.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations.
Endoglin Protein Interactome Profiling Identifies TRIM21 and Galectin-3 as New Binding Partners.
Liquid-liquid phase separation and extracellular multivalent interactions in the tale of galectin-3.
A Translocation Pathway for Vesicle-Mediated Unconventional Protein Secretion.
A reference map of the human binary protein interactome.
MERIT, a cellular system coordinating lysosomal repair, removal and replacement.
Structural Characterization of N-Linked Glycans in the Receptor Binding Domain of the SARS-CoV-2 Spike Protein and their Interactions with Human Lectins.
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome.
LGALS3 (galectin 3) mediates an unconventional secretion of SNCA/α-synuclein in response to lysosomal membrane damage by the autophagic-lysosomal pathway in human midbrain dopamine neurons.
Multimodal cell maps as a foundation for structural and functional genomics.
Galectin-3 directs mitophagy in response to Parkin-/proteasome-dependent rupture of mitochondrial outer membrane.
Decreased expression of Mac-2 (carbohydrate binding protein 35) and loss of its nuclear localization are associated with the neoplastic progression of colon carcinoma.
Expression of galectin-3 modulates T-cell growth and apoptosis.
Strikingly different localization of galectin-3 and galectin-4 in human colon adenocarcinoma T84 cells. Galectin-4 is localized at sites of cell adhesion.
Detection and distribution of the carbohydrate binding protein galectin-3 in human notochord, intervertebral disc and chordoma.
X-ray crystal structure of the human galectin-3 carbohydrate recognition domain at 2.1-A resolution.
Reactome:R-HSA-6798743
Exocytosis of secretory granule membrane proteins
Reactome:R-HSA-6800426
Exocytosis of ficolin-rich granule membrane proteins
Reactome:R-HSA-8938382
LGALS3 gene expression is stimulated by RUNX1 and RUNX2
Thermodynamic analysis of the binding of galactose and poly-N-acetyllactosamine derivatives to human galectin-3.
The major non-integrin laminin binding protein of macrophages is identical to carbohydrate binding protein 35 (Mac-2).
Epsilon BP, a beta-galactoside-binding animal lectin, recognizes IgE receptor (Fc epsilon RI) and activates mast cells.
Shuttling of galectin-3 between the nucleus and cytoplasm.
Eosinophil-expressed galectin-3 regulates cell trafficking and migration.
Role of galectin-3 as an adhesion molecule for neutrophil extravasation during streptococcal pneumonia.

Suggested Questions for Experts

Q: Is the nuclear pre-mRNA splicing / RNA-binding role of galectin-3 a direct, sequence- or structure-specific RNA-binding activity, or an indirect association via glycosylated/RNP partners captured in proteome-wide screens?

Q: To what extent does liquid-liquid phase separation of the N-terminal domain operate intracellularly (e.g. in endomembrane-damage sensing) versus only in the extracellular agglutination context?

Suggested Experiments

Experiment: Compare wild-type galectin-3 with a CRD point mutant (e.g. R186S, which abolishes beta-galactoside binding) for recruitment to ruptured lysosomes (induced by LLOMe or silica) and for co-recruitment of TRIM16/ATG16L1/BECN1, by live-cell imaging and co-IP.

Hypothesis: The carbohydrate-recognition activity of the CRD is required for galectin-3-mediated sensing of damaged endomembranes and recruitment of the autophagy machinery.

Type: structure-function / mutagenesis with damage-induced autophagy assay

Experiment: Compare full-length galectin-3 with N-terminal-tail deletion and aromatic-residue mutants (tryptophan/tyrosine substitutions that impair LLPS) for surface-receptor residence time (e.g. of GnT-V-modified receptors), lattice formation, and endocytosis rates.

Hypothesis: N-terminal-domain-driven self-association/LLPS is necessary for galectin-3 lattice formation and the consequent retention of branched-N-glycan receptors at the cell surface.

Type: domain-deletion / point-mutation with quantitative cell-surface imaging

Deep Research

Falcon

(LGALS3-deep-research-falcon.md)
Gene Research for GO Annotation Review Falcon

Gene Research for GO Annotation Review

Target

  • Gene symbol: LGALS3
  • Organism: Homo sapiens

UniProt Context

=== UNIPROT METADATA ===
UniProt ID: P17931
Entry Name: LEG3_HUMAN
Gene Name: LGALS3
Protein Name: Galectin-3
Organism: Homo sapiens (Human)
NCBI Taxonomy ID: 9606
Function: Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis (By similarity). In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells. Together with TRIM16, coordinates the recognition of membrane damage with mobilization of the core autophagy regulators ATG16L1 and BECN1 in response to damaged endomembranes.
Subcellular Location: Cytoplasm
Subunit: Probably forms homo- or heterodimers. Interacts with DMBT1 (By similarity). Interacts with CD6 and ALCAM (PubMed:24945728). Forms a complex with the ITGA3, ITGB1 and CSPG4. Interacts with LGALS3BP, LYPD3, ZFTRAF1 and UACA. Interacts with TRIM16; this interaction mediates autophagy of damage endomembranes. Interacts with cargo receptor TMED10; the interaction mediates the translocation from the cytoplasm into the ERGIC (endoplasmic reticulum-Golgi intermediate compartment) and thereby secretion (PubMed:32272059).
======================

Research Objective

Prepare a comprehensive literature-backed research report for GO annotation review of the target gene.

Focus on:

  1. The core biochemical activity of the gene product and any substrate specificity.
  2. The activation or maturation mechanism of the protein, including proteolytic processing if relevant.
  3. The best-supported subcellular localization and complexes where the active protein functions.
  4. The strongest experimentally supported biological processes in the target organism, or in very close orthologs when transfer is justified.
  5. Which annotations appear to reflect core function versus context-specific, pleiotropic, or over-extended roles.
  6. Any evidence bearing on apoptosis, developmental cell death, neuronal roles, inflammatory signaling, pyroptosis, synaptic remodeling, protein processing, and localization to cytoplasm, cytosol, nucleus, or signaling complexes.

Output Requirements

Structure the report as:

  1. Executive summary
  2. Molecular function
  3. Biological process roles
  4. Cellular localization and complexes
  5. Annotation-risk assessment
  6. Key literature

Use citations for all substantive claims.

GO Annotation Review Report for LGALS3 (Galectin-3)

Gene Symbol: LGALS3
Organism: Homo sapiens
UniProt ID: P17931
Report Date: 2026


1. EXECUTIVE SUMMARY

Galectin-3 (LGALS3) is a chimera-type β-galactoside-binding lectin with a conserved C-terminal carbohydrate recognition domain (CRD) and an intrinsically disordered N-terminal domain that enables oligomerization (radziejewska2023galectin3andepithelial pages 1-2, tan2021galectin3akey pages 1-2). The protein is encoded by the LGALS3 gene and exhibits pleiotropic functions across multiple cellular compartments. Recent literature from 2023-2025 strongly supports several core molecular functions and biological processes, while also highlighting areas where GO annotations risk overextension.

Core Biochemical Activity: LGALS3's primary molecular function is β-galactoside binding through its ~130 amino acid CRD, which recognizes N-acetyllactosamine structures on glycoproteins and glycolipids (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2). This lectin activity underpins its ability to form multivalent glycan lattices at the cell surface and to sense exposed lumenal glycans on damaged intracellular organelles (jia2020meritacellular pages 1-4).

Best-Supported Cellular Functions: The most experimentally robust findings emphasize LGALS3's role in lysosomal damage response, where it detects membrane rupture, recruits ESCRT repair machinery, and coordinates with TRIM16 to mobilize autophagy factors for lysophagy (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2). Extracellularly, LGALS3 modulates receptor signaling and fibrosis through interactions with integrins and TGFβRII (calver2024definingthemechanism pages 1-2).

Annotation Risks: Several annotations warrant caution, including broad attributions to pyroptosis (shivcharan2025endolysosomaldamagesurveillance pages 1-3), direct synaptic remodeling (siew2024galectin3aggravatesmicroglial pages 1-2), and pathology-specific localizations like Lewy bodies (garciarevilla2023galectin3shapestoxic pages 1-2). Developmental roles and unconventional secretion mechanisms also require careful contextualization.


2. MOLECULAR FUNCTION

2.1 Core Biochemical Activity

β-Galactoside Binding Lectin Activity:
LGALS3 is a β-galactoside-binding protein that recognizes glycan structures containing the N-acetyllactosamine disaccharide (Galβ1-4GlcNAc) on N- and O-glycans, glycolipids, and blood group antigens (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2). The CRD is responsible for binding, with lactose representing the minimal carbohydrate ligand. Structural studies indicate that the 3-OH group of galactose is crucial for recognition, while substitutions at 4-OH and 6-OH attenuate binding (radziejewska2023galectin3andepithelial pages 1-2). This lectin activity is glycan-specific but heterogeneous, not exhibiting strict 1:1 stoichiometry in many interactions (calver2024definingthemechanism pages 1-2).

Oligomerization and Lattice Formation:
The N-terminal domain of LGALS3, rich in proline and glycine residues, mediates self-association and pentamerization upon engagement with multivalent ligands (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2). This oligomerization capacity enables LGALS3 to cross-link cell-surface glycoconjugates into lattices that regulate receptor clustering, signaling, and internalization (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2). Recent biophysical studies also demonstrate that LGALS3 can undergo liquid-liquid phase separation, which is critical for its mitochondrial quality-control functions (liu2025galectin3directsmitophagy pages 1-2).

Substrate Specificity:
LGALS3 binds preferentially to β-galactoside-containing structures. In disease contexts such as cancer, it recognizes tumor-associated carbohydrate antigens like the Thomsen-Friedenreich (T) antigen (Galβ1-3GalNAc) on MUC1 mucin (radziejewska2023galectin3andepithelial pages 1-2). In intracellular settings, it detects exposed lumenal glycans on damaged lysosomes and mitochondria, serving as a damage sensor (jia2020meritacellular pages 1-4, liu2025galectin3directsmitophagy pages 1-2).

Molecular function Specific activity/substrate Evidence strength Key citations Notes on annotation
β-galactoside binding lectin activity Binds β-galactoside-containing glycans; recognizes N-acetyllactosamine on N- and O-glycans, glycolipids, and some blood group antigens Strong (zaborska2023theroleof pages 1-3, radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2, tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2) Core, canonical molecular function. Best candidate for central GO MF annotation.
Carbohydrate recognition domain (CRD)-dependent glycan binding Conserved ~130 aa CRD mediates sugar binding; lactose described as minimal ligand, with 3-OH crucial and 4-OH/6-OH substitutions weakening binding Strong (zaborska2023theroleof pages 1-3, radziejewska2023galectin3andepithelial pages 1-2, tan2021galectin3akey pages 1-2) Core function; more specific than broad “binding” language. Supports carbohydrate-dependent interactions in multiple contexts.
Glycan binding to exposed lumenal glycans on damaged organelles Cytosolic LGALS3 detects β-galactoside-containing glycans exposed after lysosomal/endosomal membrane damage Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Strongly supported intracellular extension of core lectin function; suitable for damage-sensing/lysophagy-related annotation with care to context.
Glycoprotein/glycolipid lattice formation at cell surface Pentameric or oligomeric Galectin-3 cross-links multivalent glycoconjugates to form lattices that regulate receptor organization/signaling/internalization Strong (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2) Core mechanistic consequence of lectin activity; useful for annotation notes, though “lattice formation” may not map cleanly to a single GO MF term.
Self-association / oligomerization N-terminal intrinsically disordered/proline-glycine-rich region supports self-association and pentamerization upon multivalent ligand engagement Strong (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2, tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2) Important biochemical property underpinning extracellular signaling; generally a supporting annotation rather than sole core function.
Integrin binding (cell-surface glycoprotein interaction) Binds αv integrins including αvβ1, αvβ5, αvβ6 in a glycosylation-dependent, heterogeneous interaction; validated for β1 integrin association in fibroblasts Strong (calver2024definingthemechanism pages 1-2) Well supported in human cells; appropriate for protein binding annotations if evidence is tied to specific integrin complexes and extracellular context.
TGFβ receptor subunit binding Binds TGFβRII in a glycosylation-dependent manner, promoting TGF-β1 signaling/activation in fibrotic context Moderate to strong (calver2024definingthemechanism pages 1-2) Supported experimentally, but likely context-specific rather than universal/core function of LGALS3.
TRIM16 interaction / scaffold recruitment Cooperates with TRIM16 at damaged lysosomes to organize autophagy machinery during lysophagy Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Strong for lysosomal damage response; should be annotated as context-dependent intracellular protein binding, not a universal primary function.
ATG16L1-associated autophagy machinery recruitment LGALS3-TRIM16 axis recruits ATG16L1 to damaged lysosomes; also required for SNCA secretory autophagy pathway Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Best treated as process-specific mechanistic role in autophagy/lysophagy rather than general molecular function.
ULK1 recruitment via damaged-organelle scaffold Recruits or helps localize ULK1-containing initiation machinery to damaged lysosomes or mitochondria during selective autophagy Moderate to strong (jia2020meritacellular pages 1-4, liu2025galectin3directsmitophagy pages 1-2) Increasingly supported, especially in organelle quality-control contexts; likely context-dependent and should not be over-generalized.
TMED10 interaction in unconventional secretion TMED10 mediates translocation/secretion of leaderless cargoes including galectin-3 via ERGIC-associated unconventional secretion pathway Moderate (zhang2020atranslocationpathway pages 1-4) Evidence strongly supports TMED10 pathway in Gal-3 secretion, but direct stable LGALS3–TMED10 binding is more pathway-contextual than core biochemical function.
Protein-protein interaction with PHB2 during mitophagy Upon mitochondrial outer membrane rupture, Galectin-3 interacts with IMM protein PHB2 and promotes ULK1 recruitment Moderate (liu2025galectin3directsmitophagy pages 1-2) Emerging intracellular function in mitophagy; likely not a core species-wide annotation yet without broader corroboration.
Carbohydrate-independent peptide/protein interactions N-terminal domain enables binding to peptide motifs/protein partners in addition to glycans Moderate (lozinski2024emergingroleof pages 1-2) Useful annotation note: many LGALS3 functions are glycan-dependent, but not all interactions are strictly carbohydrate-mediated. Avoid reducing all biology to lectin binding alone.
No catalytic enzymatic activity established Galectin-3 is a binding/scaffolding lectin without known catalytic activity Strong (garciarevilla2023galectin3shapestoxic pages 1-2) Important negative annotation point: avoid enzyme activity terms unless future direct evidence appears.

Table: This table summarizes the best-supported molecular functions and interaction activities of human Galectin-3/LGALS3, separating core lectin biochemistry from context-dependent binding and scaffolding roles. It is useful for GO review because it highlights which annotations are central versus potentially overextended.

2.2 Protein-Protein Interactions

Integrin Binding:
Surface plasmon resonance and coimmunoprecipitation studies confirm that LGALS3 binds αv integrins (αvβ1, αvβ5, αvβ6) and β1 integrin in a glycosylation-dependent manner (calver2024definingthemechanism pages 1-2). Proximity ligation assays show that LGALS3 and β1 integrin colocalize within ~40 nm on fibroblast surfaces, with this association increased by TGF-β1 treatment and blocked by galectin-3 inhibitors (calver2024definingthemechanism pages 1-2). This interaction is central to LGALS3's role in potentiating integrin-mediated TGF-β1 activation in fibrosis.

TGFβRII Binding:
LGALS3 also binds the TGFβRII subunit in a glycan-dependent manner, promoting TGF-β1 signaling in lung fibroblasts (calver2024definingthemechanism pages 1-2). Small-molecule inhibitors targeting the CRD block these interactions, confirming carbohydrate-mediated binding.

TRIM16-ATG16L1-ULK1 Autophagy Complex:
At damaged lysosomes, LGALS3 cooperates with TRIM16, an autophagy receptor-regulator, to recruit core autophagy machinery including ATG16L1, ULK1, and LC3-related proteins (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2). TRIM16 serves as a platform to engage early autophagy factors, and this LGALS3-TRIM16 axis is essential for lysophagy—the selective autophagic removal of damaged lysosomes (jia2020meritacellular pages 1-4).

ESCRT Recruitment:
LGALS3 recruits and organizes ESCRT components, particularly PDCD6IP/ALIX, CHMP4A, and CHMPB, to sites of lysosomal membrane damage for membrane repair (jia2020meritacellular pages 1-4). This function is independent of ESCRT-I components like TSG101 and represents a parallel ESCRT-III recruitment pathway.

TMED10-Mediated Unconventional Secretion:
LGALS3, which lacks a signal peptide, is secreted via a TMED10-dependent unconventional pathway through the ER-Golgi intermediate compartment (ERGIC) (zhang2020atranslocationpathway pages 1-4). TMED10 mediates the translocation of leaderless cargoes, including LGALS3, into secretory vesicles. This process is enhanced by chaperones HSP90A/HSP90AB1 and involves protein unfolding (zhang2020atranslocationpathway pages 1-4).

PHB2 and Mitophagy:
In the context of PINK1/Parkin-mediated mitophagy, LGALS3 relocalizes from the cytosol to damaged mitochondria after outer membrane rupture. It interacts with the inner mitochondrial membrane protein PHB2 and recruits ULK1 to promote mitophagy (liu2025galectin3directsmitophagy pages 1-2). This represents an emerging intracellular function.

2.3 Absence of Catalytic Activity

Importantly, LGALS3 is a binding and scaffolding lectin without known intrinsic enzymatic or catalytic activity (garciarevilla2023galectin3shapestoxic pages 1-2). This should be reflected in GO molecular function annotations by avoiding enzyme activity terms.


3. BIOLOGICAL PROCESS ROLES

3.1 Lysosomal Damage Response and Lysophagy

Core Intracellular Function:
The most robustly supported biological process for LGALS3 in recent literature is its role in sensing and responding to lysosomal membrane damage. When lysosomes are damaged by lysosomotropic agents, pathogenic protein aggregates, or intracellular pathogens, lumenal glycans become exposed to the cytosol. Cytosolic LGALS3 binds these exposed glycans and triggers a coordinated response termed MERIT (Membrane repair, Removal, and Replacement) (jia2020meritacellular pages 1-4).

Lysosomal Membrane Repair:
LGALS3 recruits ESCRT machinery (PDCD6IP/ALIX, CHMP proteins) to repair damaged lysosomal membranes (jia2020meritacellular pages 1-4). This ESCRT-dependent repair occurs early in the damage response and is critical for maintaining lysosomal integrity.

Lysophagy:
When damage is extensive, LGALS3 cooperates with TRIM16 to engage autophagy machinery, recruiting ATG16L1, ULK1, and LC3 to enclose and degrade damaged lysosomes via lysophagy (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2, wang2023periplocinsuppressesthe pages 1-2). This selective autophagy pathway is essential for maintaining cellular homeostasis under lysosomal stress. LGALS3 knockout exacerbates lysosomal damage and reduces autophagic clearance efficiency (jia2020meritacellular pages 1-4).

TFEB-Mediated Lysosomal Biogenesis:
In the absence of LGALS3, compensatory mechanisms include increased TFEB nuclear translocation to drive de novo lysosomal biogenesis (jia2020meritacellular pages 1-4). This suggests that LGALS3-dependent repair and removal pathways work in concert with transcriptional programs to maintain the lysosomal network.

Biological process Role/mechanism Evidence strength Key citations Core vs. contextual designation
Lysosomal damage response Cytosolic LGALS3 binds lumenal glycans exposed by damaged lysosomal/endosomal membranes and helps organize the response to membrane injury Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Core intracellular function
Lysosomal membrane repair Recruits/organizes ESCRT-associated factors including PDCD6IP/ALIX and CHMP proteins at damaged lysosomes, promoting membrane repair Strong (jia2020meritacellular pages 1-4) Core intracellular function
Lysophagy / selective autophagic removal of damaged lysosomes Cooperates with TRIM16 to recruit autophagy machinery, including ATG16L1 and LC3-related factors, to remove heavily damaged lysosomes Strong (jia2020meritacellular pages 1-4, wang2023periplocinsuppressesthe pages 1-2, burbidge2022lgals3(galectin3) pages 1-2) Core intracellular function
Secretory autophagy / unconventional secretion Supports autophagy-linked unconventional secretion of cargo such as α-synuclein after vesicular damage; secretion also depends on TRIM16 and ATG16L1 Strong (burbidge2022lgals3(galectin3) pages 1-2, zhang2020atranslocationpathway pages 1-4) Contextual but well supported
Autophagy-related organelle quality control Functions as a damage sensor/scaffold that mobilizes core autophagy regulators to injured organelles beyond lysosomes Strong (jia2020meritacellular pages 1-4, liu2025galectin3directsmitophagy pages 1-2) Core mechanistic extension
Mitophagy Relocalizes to damaged mitochondria after Parkin/proteasome-dependent outer membrane rupture, interacts with PHB2, and recruits ULK1 to promote mitophagy Moderate (liu2025galectin3directsmitophagy pages 1-2) Contextual / emerging
Inflammation / innate immune activation Broadly modulates inflammatory signaling and immune cell activation; acts in activated microglia/macrophages and other immune contexts Strong (zaborska2023theroleof pages 1-3, tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2) Contextual pleiotropic role
Neuroinflammation Upregulated in disease-associated microglia and promotes microglial activation, inflammatory responses, and neurodegeneration-associated programs Strong (tan2021galectin3akey pages 1-2, siew2024galectin3aggravatesmicroglial pages 1-2, lozinski2024emergingroleof pages 1-2) Contextual but strongly supported in CNS disease
Tauopathy progression Released from microglia in free and EV-associated forms; enhances pathogenic tau accumulation, fibrillation, microglial activation, synaptic loss, and memory impairment Strong (siew2024galectin3aggravatesmicroglial pages 1-2) Contextual disease role
Parkinson disease / α-synuclein proteostasis Mediates secretion of α-synuclein after vesicle damage and can also shape toxic α-synuclein strains, linking LGALS3 to synucleinopathy progression Moderate (burbidge2022lgals3(galectin3) pages 1-2, garciarevilla2023galectin3shapestoxic pages 1-2) Contextual disease role
Fibrosis / fibrogenic signaling Extracellular galectin-3 promotes TGF-β1 activation/signaling through glycosylation-dependent interactions with integrins and TGFβRII; linked to collagen/TIMP1/hyaluronan production Strong (calver2024definingthemechanism pages 1-2) Contextual but strongly supported
Cell-surface receptor organization and signaling Forms glycan lattices that regulate receptor clustering, signaling, and internalization, thereby shaping downstream biological responses Strong (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2) Core mechanistic function driving many contextual processes
Apoptosis regulation Reported to modulate apoptosis in multiple settings; in some contexts promotes survival, while in others damaged-organelle stress and associated pathways correlate with apoptosis outcomes Moderate (zaborska2023theroleof pages 1-3, wang2023periplocinsuppressesthe pages 1-2, lozinski2024emergingroleof pages 1-2) Contextual and bidirectional
Pyroptosis / inflammasome-linked cell death Evidence for direct LGALS3 involvement is limited and context-dependent; recent work more strongly supports galectin-8 than galectin-3 for rapid noncanonical inflammasome sensing, cautioning against broad LGALS3 pyroptosis annotation Weak (shivcharan2025endolysosomaldamagesurveillance pages 1-3) Likely overextended if used broadly
Pre-mRNA splicing / nuclear RNA processing Nuclear galectin-3 has long been associated with pre-mRNA splicing regulation; recent reviews continue to cite this as an established nuclear role Moderate (zaborska2023theroleof pages 1-3, zhang2025multifacetedrolesof pages 10-11, radziejewska2023galectin3andepithelial pages 1-2) Core but less emphasized in recent disease literature
Development / gliogenesis / neural progenitor behavior Evidence from mammalian systems suggests roles in neural progenitor motility and gliogenesis; supports developmental influence but not a universally established core human developmental annotation Moderate (lozinski2024emergingroleof pages 1-2) Contextual / developmental
Development / epithelial differentiation and implantation-related processes Reviews and related studies indicate roles in epithelial differentiation and reproductive/implantation contexts, but these are more specialized and should be annotated cautiously Weak to moderate (zhang2025multifacetedrolesof pages 10-11) Contextual / specialized
Host defense against endomembrane-damaging stress Protects cells from lysosomotropic drugs, microbial damage, and toxic protein aggregates by coordinating repair, removal, and replacement pathways Strong (jia2020meritacellular pages 1-4) Core intracellular stress-response role

Table: This table summarizes the best-supported biological processes involving human LGALS3/galectin-3, separating core intracellular damage-response functions from broader context-specific roles in inflammation, fibrosis, neurodegeneration, and cell death. It is useful for GO annotation review because it highlights where evidence is strongest and where annotations may be overextended.

3.2 Mitophagy

Recent proteomic studies identify LGALS3 as significantly enriched at ruptured mitochondrial outer membranes during PINK1/Parkin-dependent mitophagy (liu2025galectin3directsmitophagy pages 1-2). LGALS3 relocalizes from the cytosol to damaged mitochondria, interacts with PHB2, and recruits ULK1. Mutations disrupting LGALS3's liquid-liquid phase separation properties abrogate its mitophagy function, suggesting that biomolecular condensate formation around damaged mitochondria is critical for organellar quality control (liu2025galectin3directsmitophagy pages 1-2). While this represents an emerging and well-supported mechanism, it is more context-specific than the lysosomal damage response.

3.3 Secretory Autophagy and Unconventional Protein Secretion

LGALS3 participates in autophagy-dependent unconventional secretion pathways. In human midbrain dopamine neurons, LGALS3 mediates the release of α-synuclein (SNCA) following vesicular damage (burbidge2022lgals3(galectin3) pages 1-2). This secretion is dependent on TRIM16 and ATG16L1, providing evidence that LGALS3 functions in a specialized autophagic secretory pathway. Exogenous SNCA fibrils that rupture endocytic vesicles trigger LGALS3 recruitment and subsequent secretion of both exogenous and endogenous SNCA (burbidge2022lgals3(galectin3) pages 1-2). This mechanism may contribute to the cell-to-cell transmission of pathogenic proteins in neurodegenerative diseases.

3.4 Inflammation and Immune Responses

LGALS3 is widely recognized as a modulator of innate and adaptive immune responses (tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2). It is upregulated in activated microglia and macrophages and acts as a pro-inflammatory mediator. LGALS3 can bind to toll-like receptor 4 (TLR4) and TREM2, influencing microglial activation states (tan2021galectin3akey pages 1-2). In the CNS, LGALS3 promotes microglial activation, cytokine production, and inflammatory signaling pathways including NF-κB and JAK-STAT (tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2). However, these inflammatory roles are highly context-dependent and vary across tissue types and disease states.

3.5 Fibrosis and TGF-β Signaling

Extracellular LGALS3 promotes fibrosis by potentiating TGF-β1 activation. It facilitates lysophosphatidic acid (LPA)-induced integrin-mediated TGF-β1 activation in human lung fibroblasts (calver2024definingthemechanism pages 1-2). LGALS3 binding to αv integrins and TGFβRII enhances downstream SMAD signaling, leading to increased collagen deposition, TIMP1 production, and hyaluronan secretion in lung fibrosis models (calver2024definingthemechanism pages 1-2). Galectin-3 inhibitors reduce these fibrotic markers in precision-cut lung slices from IPF patients (calver2024definingthemechanism pages 1-2). This fibrogenic activity is well-supported but context-specific to fibrotic diseases.

3.6 Neuroinflammation and Neurodegeneration

Tauopathy:
LGALS3 is upregulated in microglia in Alzheimer's disease and frontotemporal lobar dementia (siew2024galectin3aggravatesmicroglial pages 1-2). Pathogenic tau (pTau) triggers the release of LGALS3 from microglia in both free and extracellular vesicle-associated forms. Both forms increase pathogenic tau accumulation in recipient cells and enhance tau fibrillation (siew2024galectin3aggravatesmicroglial pages 1-2). Single-cell RNA-seq analysis of tauopathy mouse models reveals a population of Gal3-associated microglia with enhanced inflammatory and immune-response programs. Genetic deletion of Gal3 in THY-Tau22 mice suppresses microglial activation, reduces pTau levels and synaptic loss, and rescues memory impairment (siew2024galectin3aggravatesmicroglial pages 1-2).

Parkinson's Disease:
In PD, LGALS3 is found in Lewy bodies and other α-synuclein deposits, as well as associated with disrupted lysosomes (garciarevilla2023galectin3shapestoxic pages 1-2). In vitro, Gal3 interacts with α-synuclein fibrils and affects their spatial propagation and stability, producing short, amorphous toxic strains (garciarevilla2023galectin3shapestoxic pages 1-2). In a mouse model of PD (intranigral αSyn overexpression), Gal3 knockout leads to increased intracellular αSyn accumulation but preserved dopaminergic integrity and motor function, suggesting a complex role in shaping toxic strains (garciarevilla2023galectin3shapestoxic pages 1-2).

3.7 Apoptosis

LGALS3 has been reported to modulate apoptosis in multiple contexts, with bidirectional effects (survival vs. death) depending on cellular context (zaborska2023theroleof pages 1-3, lozinski2024emergingroleof pages 1-2). In some settings, LGALS3 promotes cell survival by inhibiting apoptosis, while in others, lysosomal damage and associated LGALS3-mediated stress responses correlate with apoptotic outcomes (wang2023periplocinsuppressesthe pages 1-2). These effects are context-dependent and should be annotated with caution.

3.8 Pyroptosis: Limited Evidence for LGALS3

While LGALS3 has been implicated in some inflammatory contexts, recent mechanistic studies emphasize that galectin-8, not galectin-3, is the primary galectin coupling endolysosomal damage sensing to noncanonical inflammasome activation and pyroptosis (shivcharan2025endolysosomaldamagesurveillance pages 1-3). In human epithelial cells, galectin-8 licenses caspase-4-mediated pyroptosis during intracellular bacterial infections, whereas LGALS3 depletion had minimal impact on Salmonella-induced pyroptosis (shivcharan2025endolysosomaldamagesurveillance pages 1-3). Broad GO annotations attributing pyroptosis regulation to LGALS3 would be overextended based on current evidence.

3.9 Synaptic Remodeling: Indirect Evidence Only

Available evidence links LGALS3 to synaptic loss in tauopathy and neurodegeneration (siew2024galectin3aggravatesmicroglial pages 1-2), but there is limited direct evidence that LGALS3 itself functions as a core synaptic remodeling factor in healthy human neurons. Synaptic effects appear largely indirect, mediated by microglial activation and neuroinflammatory pathways (siew2024galectin3aggravatesmicroglial pages 1-2, lozinski2024emergingroleof pages 1-2). Direct synaptic function annotations should be approached with caution.

3.10 Developmental Roles

Some reviews discuss LGALS3 in neural progenitor motility, gliogenesis, and specialized developmental contexts (lozinski2024emergingroleof pages 1-2, zhang2025multifacetedrolesof pages 10-11). However, these developmental annotations are not as robustly established in humans as the lectin and damage-response functions. Developmental process annotations should be restricted to directly evidenced systems and not over-generalized.


4. CELLULAR LOCALIZATION AND COMPLEXES

4.1 Subcellular Localization

Cytoplasm/Cytosol:
LGALS3 is synthesized on free ribosomes in the cytoplasm, lacks a signal peptide, and exists as a soluble intracellular pool before relocalization or secretion (tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2). This is a well-supported core cellular component annotation.

Nucleus:
LGALS3 is present in the nucleus, where it has been implicated in pre-mRNA splicing and gene regulation (zhang2025multifacetedrolesof pages 10-11, radziejewska2023galectin3andepithelial pages 1-2, tan2021galectin3akey pages 1-2). Nuclear localization is consistently noted in reviews, though specific subnuclear compartments are less well-defined.

Extracellular Space:
LGALS3 is secreted via unconventional (non-classical) pathways independent of the ER-Golgi secretory route (zhang2020atranslocationpathway pages 1-4). Extracellular LGALS3 binds glycans on cell-surface and extracellular matrix glycoproteins, modulating signaling, adhesion, and inflammation (calver2024definingthemechanism pages 1-2, mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2). This is a strong extracellular annotation, but GO should not imply conventional signal-peptide-mediated secretion.

Cell Surface / Plasma Membrane-Associated:
Secreted LGALS3 remains tethered to the cell surface through glycan interactions and forms lattices that regulate receptor clustering and signaling (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2). It should be annotated as cell-surface-associated rather than an integral membrane protein.

ERGIC (ER-Golgi Intermediate Compartment):
LGALS3 uses a TMED10-dependent translocation pathway through the ERGIC for unconventional secretion (zhang2020atranslocationpathway pages 1-4). This is a pathway-level localization rather than stable constitutive residence, and GO annotations should reflect this transient association.

Damaged Lysosomes:
Upon lysosomal membrane damage, cytosolic LGALS3 binds exposed lumenal glycans and marks damaged lysosomes for repair or removal (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2). This is a highly context-specific, damage-induced localization that is among the strongest intracellular findings for LGALS3.

Damaged Mitochondria:
During mitophagy, LGALS3 relocalizes to damaged mitochondria after outer membrane rupture (liu2025galectin3directsmitophagy pages 1-2). This is an emerging but compelling localization, though not a constitutive mitochondrial component annotation.

Extracellular Vesicles:
In CNS disease contexts, LGALS3 is released in extracellular vesicle-associated forms, accompanying pathogenic cargo transmission (siew2024galectin3aggravatesmicroglial pages 1-2). This is a useful contextual annotation in neurodegeneration.

Lewy Bodies (Pathology-Specific):
LGALS3 associates with Lewy body outer regions and disrupted lysosomes in Parkinson's disease tissue (garciarevilla2023galectin3shapestoxic pages 1-2). However, this is a pathology-linked association rather than normal cellular localization, and GO annotations to disease-specific structures like Lewy bodies should be avoided or carefully contextualized.

Localization/Complex Functional context Evidence strength Key citations Annotation notes
Cytoplasm / cytosol Major intracellular pool; LGALS3 is synthesized on free ribosomes, lacks a signal peptide, and functions as a soluble lectin/scaffold before secretion or relocalization Strong (tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2) Safe core cellular component annotation; “cytosol” is well supported for the soluble intracellular pool
Nucleus Nuclear LGALS3 is linked to pre-mRNA splicing and gene-regulatory functions; reviews consistently note nucleo-cytoplasmic distribution Moderate to strong (zhang2025multifacetedrolesof pages 10-11, radziejewska2023galectin3andepithelial pages 1-2, tan2021galectin3akey pages 1-2) Nuclear annotation is supportable, but specific nuclear subcompartments are less clearly defined here
Extracellular space / secreted pool Secreted by non-classical/unconventional pathways; extracellular LGALS3 binds glycans and regulates signaling, adhesion, fibrosis, and inflammatory communication Strong (calver2024definingthemechanism pages 1-2, mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2, zhang2020atranslocationpathway pages 1-4) Strong extracellular annotation; should not imply conventional ER-Golgi secretion via signal peptide
Cell surface / plasma membrane-associated Secreted LGALS3 remains tethered through glycoprotein/glycolipid interactions and forms lattices that reorganize receptors and modulate signaling/internalization Strong (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2) Best treated as cell-surface associated rather than integral membrane protein
ER-Golgi intermediate compartment (ERGIC) / TMED10 pathway Leaderless LGALS3 uses TMED10-dependent unconventional secretion through ERGIC-associated translocation machinery Moderate to strong (zhang2020atranslocationpathway pages 1-4) Supportive for pathway-level localization; use caution if assigning stable ERGIC residence as a constitutive component
Damaged lysosomes / damaged endolysosomal membranes Cytosolic LGALS3 binds exposed lumenal glycans after membrane rupture and marks damaged lysosomes for repair or removal Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Very strong context-dependent localization; ideal for damage-response/lysophagy-related annotation
ESCRT-associated lysosomal repair complex At damaged lysosomes, LGALS3 recruits/organizes PDCD6IP/ALIX and CHMP proteins to promote membrane repair Strong (jia2020meritacellular pages 1-4) Supports annotation to repair assemblies at damaged lysosomes; context-specific, not constitutive lysosome residence
TRIM16-ATG16L1-ULK1 autophagy initiation scaffold at damaged lysosomes LGALS3 cooperates with TRIM16 to recruit ATG16L1, ULK1, LC3-related machinery and drive lysophagy/secretory autophagy Strong (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2) Strong complex-level evidence in damaged-organelle autophagy; annotate as inducible/contextual complex
Damaged mitochondria During PINK1/Parkin-mediated mitophagy, LGALS3 relocalizes from cytosol to mitochondria after outer membrane rupture and encloses damaged organelles Moderate (liu2025galectin3directsmitophagy pages 1-2) Emerging but compelling context-specific localization; not a constitutive mitochondrial protein
PHB2-ULK1 mitophagy-related complex On damaged mitochondria, LGALS3 interacts with IMM protein PHB2 and promotes ULK1 recruitment for mitophagy Moderate (liu2025galectin3directsmitophagy pages 1-2) Best treated as an inducible mitophagy complex; evidence is recent and may warrant cautious GO use
Integrin-associated cell-surface complex Extracellular LGALS3 binds αv integrins, including αvβ1/αvβ5/αvβ6, and colocalizes with β1 integrin on fibroblast surfaces to potentiate TGF-β signaling Strong (calver2024definingthemechanism pages 1-2) Good support for protein-containing extracellular/cell-surface complexes; likely context-specific rather than universal
TGFβRII-integrin signaling assembly LGALS3 binds TGFβRII and αv integrins in a glycosylation-dependent manner to enhance profibrotic signaling Moderate to strong (calver2024definingthemechanism pages 1-2) Strong disease-context evidence; avoid overgeneralizing to all cell types
Extracellular vesicle-associated pool In neuronal/microglial disease contexts, LGALS3 can be released in EV-associated form and accompany pathogenic cargo transmission Moderate (siew2024galectin3aggravatesmicroglial pages 1-2) Useful contextual annotation in neurodegeneration, but not necessarily a core constitutive component
α-Synuclein secretory autophagy compartment In vesicle-damage settings, LGALS3-positive compartments participate in autophagic-lysosomal secretion of SNCA/α-synuclein Moderate (burbidge2022lgals3(galectin3) pages 1-2) Contextual neuronal annotation; strong mechanistic value but specialized
Lewy body / α-synuclein deposit association In PD tissue, GAL3 associates with Lewy body outer regions and disrupted lysosomes linked to α-synuclein pathology Moderate (garciarevilla2023galectin3shapestoxic pages 1-2) Disease-pathology association is real, but direct GO cellular component annotation to Lewy bodies may be too pathology-specific
Microglial intracellular/extracellular pool in CNS disease Disease-associated microglia upregulate and release LGALS3, including free and EV-associated forms, during tauopathy/neuroinflammation Strong (siew2024galectin3aggravatesmicroglial pages 1-2, lozinski2024emergingroleof pages 1-2) Supports contextual cell-type-specific localization in microglia, not a distinct core organelle term
Not an integral membrane or classical secretory-pathway luminal protein LGALS3 lacks a signal peptide and is not inserted into membranes like a transmembrane cargo Strong (tan2021galectin3akey pages 1-2, zhang2020atranslocationpathway pages 1-4) Important negative annotation note: avoid membrane-integral or classical secretory-lumen assumptions

Table: This table summarizes the best-supported subcellular localizations and inducible protein complexes of human galectin-3/LGALS3, emphasizing where the evidence is strongest for GO cellular component review. It is especially useful for separating core localization terms from damage-responsive or disease-contextual assemblies.

4.2 Protein Complexes

TRIM16-ATG16L1-ULK1 Complex (Lysophagy):
At damaged lysosomes, LGALS3 cooperates with TRIM16 to recruit ATG16L1, ULK1, and LC3-related autophagy machinery (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2). This is a strong, inducible complex annotation.

ESCRT-Associated Repair Complex:
LGALS3 recruits PDCD6IP/ALIX, CHMP4A, and CHMPB for lysosomal membrane repair (jia2020meritacellular pages 1-4). This is a context-dependent repair complex.

PHB2-ULK1 Mitophagy Complex:
On damaged mitochondria, LGALS3 interacts with PHB2 and recruits ULK1 (liu2025galectin3directsmitophagy pages 1-2). This is an emerging mitophagy complex.

Integrin-TGFβRII Signaling Assembly:
Extracellular LGALS3 forms complexes with αv integrins and TGFβRII in fibrotic contexts (calver2024definingthemechanism pages 1-2). This is a strong disease-context complex.


5. ANNOTATION-RISK ASSESSMENT

Potential annotation issue Risk level Explanation Supporting evidence/citation
Over-extending pleiotropic disease roles into core GO terms High LGALS3 participates in many disease-associated processes, but the most consistently supported core functions are β-galactoside glycan binding, glycan-dependent lattice/scaffold formation, and damage sensing at ruptured endomembranes. Broad annotations to all reported disease outcomes risk conflating downstream phenotypes with primary molecular function. (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2, jia2020meritacellular pages 1-4, lozinski2024emergingroleof pages 1-2)
Conflating core function with context-specific inflammatory/fibrotic signaling High Strong evidence supports extracellular interactions with integrins and TGFβRII in specific fibrotic settings, but these should not automatically be treated as universal core functions across all cell types and tissues. (calver2024definingthemechanism pages 1-2)
Annotating pathology-specific locations such as Lewy bodies as normal cellular component High GAL3 is associated with Lewy body outer regions and disrupted lysosomes in Parkinson disease tissue, but this is a pathology-linked association rather than evidence of a constitutive normal subcellular localization. (garciarevilla2023galectin3shapestoxic pages 1-2)
Synaptic remodeling / synapse organization annotations High Available evidence links LGALS3 to neuroinflammation, tauopathy, synaptic loss, and neuronal disease progression, but there is limited direct evidence that human LGALS3 is a core synaptic remodeling factor. Synaptic effects appear largely indirect via microglia/pathology. (siew2024galectin3aggravatesmicroglial pages 1-2, lozinski2024emergingroleof pages 1-2)
Broad pyroptosis annotation High Evidence in the reviewed set does not support LGALS3 as a general pyroptosis effector. A recent mechanistic study emphasizes galectin-8, not galectin-3, in coupling endomembrane damage sensing to noncanonical inflammasome activation, so broad LGALS3 pyroptosis annotation would be overextended. (shivcharan2025endolysosomaldamagesurveillance pages 1-3)
Developmental process annotations without strong human-specific support Moderate Some reviews discuss roles in neural progenitor behavior, gliogenesis, or specialized developmental contexts, but these are not as strongly established in human LGALS3 as the lectin/damage-response functions. Developmental annotations should be restricted to directly evidenced systems. (lozinski2024emergingroleof pages 1-2, zhang2025multifacetedrolesof pages 10-11)
Treating unconventional secretion as classical secretion High LGALS3 lacks a signal peptide, is synthesized on free ribosomes, and uses non-classical/TMED10-dependent unconventional secretion routes. GO handling should avoid implying conventional ER-Golgi lumenal secretion as the default mechanism. (tan2021galectin3akey pages 1-2, zhang2020atranslocationpathway pages 1-4)
Assigning stable ERGIC localization instead of pathway-context localization Moderate TMED10-dependent translocation places LGALS3 in an ERGIC-associated unconventional secretion pathway, but this does not necessarily justify a constitutive ERGIC component annotation for LGALS3. (zhang2020atranslocationpathway pages 1-4)
Treating mitophagy role as universally established core biology Moderate Recent evidence supports LGALS3 recruitment to damaged mitochondria and PHB2/ULK1-linked mitophagy, but this is emerging and more context-specific than the better-established lysosomal damage response. (liu2025galectin3directsmitophagy pages 1-2)
Under-annotating lysosomal damage response / lysophagy because of focus on extracellular roles Low In contrast to several overextension risks, there is strong mechanistic evidence that LGALS3 binds exposed lumenal glycans on damaged lysosomes and coordinates ESCRT repair and TRIM16-dependent lysophagy; this appears among the strongest intracellular process annotations. (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2)

Table: This table highlights the main GO annotation risks for human LGALS3/galectin-3, distinguishing well-supported core functions from disease- or context-specific extensions. It is useful for avoiding over-annotation while preserving strong evidence for lectin activity, unconventional secretion, and lysosomal damage response.

5.1 High-Risk Annotations

1. Over-extending Pleiotropic Disease Roles:
LGALS3 participates in many disease-associated processes, but the most consistently supported core functions are β-galactoside glycan binding, lattice formation, and endomembrane damage sensing. Broad annotations to all reported downstream disease phenotypes risk conflating secondary/tertiary effects with primary molecular function.

2. Broad Pyroptosis Annotation:
Current evidence does not support LGALS3 as a general pyroptosis effector. Galectin-8 is the primary galectin mediating noncanonical inflammasome sensing (shivcharan2025endolysosomaldamagesurveillance pages 1-3). LGALS3 pyroptosis annotations should be avoided or heavily qualified.

3. Synaptic Remodeling:
Evidence for direct LGALS3 involvement in synaptic remodeling is limited. Effects on synapse loss appear indirect via neuroinflammation (siew2024galectin3aggravatesmicroglial pages 1-2, lozinski2024emergingroleof pages 1-2).

4. Pathology-Specific Localizations (e.g., Lewy Bodies):
Associations with disease-specific structures like Lewy bodies should not be treated as normal cellular component annotations (garciarevilla2023galectin3shapestoxic pages 1-2).

5. Treating Unconventional Secretion as Classical Secretion:
LGALS3 lacks a signal peptide and uses TMED10-dependent unconventional routes. GO should not imply conventional ER-Golgi lumenal secretion (tan2021galectin3akey pages 1-2, zhang2020atranslocationpathway pages 1-4).

5.2 Moderate-Risk Annotations

1. Developmental Processes:
Some evidence exists for developmental roles, but these are not as robustly established in humans as core lectin functions (lozinski2024emergingroleof pages 1-2, zhang2025multifacetedrolesof pages 10-11).

2. Mitophagy:
While emerging evidence is compelling (liu2025galectin3directsmitophagy pages 1-2), mitophagy is more context-specific than the well-established lysosomal damage response. Annotations should reflect this.

3. ERGIC Localization:
TMED10-dependent translocation involves ERGIC, but this is a pathway-associated localization rather than stable residence (zhang2020atranslocationpathway pages 1-4).

5.3 Low-Risk Annotations (Strong Support)

1. Lysosomal Damage Response / Lysophagy:
Among the strongest intracellular process annotations, with extensive mechanistic support (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2).

2. β-Galactoside Binding Lectin Activity:
Core canonical molecular function with decades of support (zaborska2023theroleof pages 1-3, radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2).

3. Cytoplasm, Nucleus, Extracellular Space:
Well-documented subcellular localizations (tan2021galectin3akey pages 1-2, lozinski2024emergingroleof pages 1-2).


6. KEY LITERATURE

Recent Reviews (2023-2025)

  1. Mukherjee et al. (2025). Galectin-3: Integrator of Signaling via Hexosamine Flux. Biomolecules 15, 1028. (mukherjee2025galectin3integratorof pages 1-2)
  2. Comprehensive review of LGALS3 structure, lectin activity, O-GlcNAc regulation, and unconventional secretion. Emphasizes nutrient-driven regulation and disease biomarker roles.

  3. Zhang et al. (2025). Multifaceted roles of Galectins: from carbohydrate binding to targeted cancer therapy. Biomarker Research 13. (zhang2025multifacetedrolesof pages 10-11)

  4. Detailed structural characterization, ligand-binding properties, and cancer-related functions of galectin family members.

  5. Zaborska et al. (2023). The Role of Galectin-3 in Heart Failure. Int. J. Mol. Sci. 24, 13111. (zaborska2023theroleof pages 1-3)

  6. Review of LGALS3 in cardiac fibrosis, inflammation, and ventricular remodeling.

  7. Radziejewska (2023). Galectin-3 and Epithelial MUC1 Mucin—Interactions Supporting Cancer Development. Cancers 15, 2680. (radziejewska2023galectin3andepithelial pages 1-2)

  8. Focuses on T antigen recognition and cancer-associated interactions.

Mechanistic Studies on Lysosomal Damage Response and Autophagy

  1. Jia et al. (2020). MERIT, a cellular system coordinating lysosomal repair, removal and replacement. Autophagy 16, 1539-1541. (jia2020meritacellular pages 1-4)
  2. Landmark study defining LGALS3's role in ESCRT-mediated lysosomal repair and TRIM16-dependent lysophagy.

  3. Burbidge et al. (2022). LGALS3 mediates an unconventional secretion of SNCA/α-synuclein. Autophagy 18, 1020-1048. (burbidge2022lgals3(galectin3) pages 1-2)

  4. Demonstrates LGALS3-mediated secretory autophagy of α-synuclein in human midbrain neurons.

  5. Wang et al. (2023). Periplocin suppresses colorectal cancer by triggering LGALS3-mediated lysophagy. Autophagy 19, 3132-3150. (wang2023periplocinsuppressesthe pages 1-2)

  6. Shows that LGALS3 upregulation and lysophagy induction can exacerbate lysosomal damage in cancer cells.

Neuroinflammation and Neurodegeneration

  1. Siew et al. (2024). Galectin-3 aggravates microglial activation and tau transmission in tauopathy. J. Clin. Invest. 134, e165523. (siew2024galectin3aggravatesmicroglial pages 1-2)
  2. Demonstrates Gal3 upregulation in tauopathy, EV-associated release, and rescue of tau pathology and memory deficits in Gal3 knockout mice.

  3. García-Revilla et al. (2023). Galectin-3 shapes toxic alpha-synuclein strains in Parkinson's disease. Acta Neuropathol. 146, 51-75. (garciarevilla2023galectin3shapestoxic pages 1-2)

  4. Links Gal3 to α-synuclein aggregation, Lewy body formation, and toxic strain production in PD.

  5. Tan et al. (2021). Galectin-3: a key player in microglia-mediated neuroinflammation and Alzheimer's disease. Cell Biosci. 11, 78. (tan2021galectin3akey pages 1-2)

    • Reviews Gal3's role in microglial activation, TREM2 signaling, and AD pathogenesis.
  6. Lozinski et al. (2024). Emerging role of galectin 3 in neuroinflammation and neurodegeneration. Neural Regen. Res. 19, 2004-2009. (lozinski2024emergingroleof pages 1-2)

    • Summarizes Gal3 structure, immune functions, and therapeutic potential in CNS diseases.

Fibrosis and Signaling

  1. Calver et al. (2024). Defining the mechanism of galectin-3–mediated TGF-β1 activation. J. Biol. Chem. 300, 107300. (calver2024definingthemechanism pages 1-2)
    • Demonstrates LGALS3 binding to αv integrins and TGFβRII, promoting TGF-β1 activation in lung fibrosis.

Emerging Mechanisms

  1. Liu et al. (2025). Galectin-3 directs mitophagy in response to Parkin-/proteasome-dependent rupture of mitochondrial outer membrane. Biol. Direct 20, 108. (liu2025galectin3directsmitophagy pages 1-2)

    • Proteomic identification of Gal3 at ruptured mitochondrial membranes, demonstrating PHB2 interaction and ULK1 recruitment.
  2. Zhang et al. (2020). A Translocation Pathway for Vesicle-Mediated Unconventional Protein Secretion. Cell 181, 637-652. (zhang2020atranslocationpathway pages 1-4)

    • Defines TMED10-dependent unconventional secretion pathway for leaderless cargoes including LGALS3.
  3. Shivcharan et al. (2025). Endolysosomal damage surveillance enables rapid inflammasome sensing of pathogens. Cell Rep. 44, 116002. (shivcharan2025endolysosomaldamagesurveillance pages 1-3)

    • Mechanistically clarifies that galectin-8, not galectin-3, is the primary galectin coupling endomembrane damage to noncanonical inflammasome activation.

7. CONCLUSIONS

Core Functions

The strongest evidence supports LGALS3 annotations for:

  1. β-Galactoside binding lectin activity (radziejewska2023galectin3andepithelial pages 1-2, mukherjee2025galectin3integratorof pages 1-2)
  2. Lysosomal damage response (jia2020meritacellular pages 1-4, burbidge2022lgals3(galectin3) pages 1-2)
  3. Lysophagy via TRIM16-ATG16L1-ULK1 recruitment (jia2020meritacellular pages 1-4)
  4. Unconventional secretion via TMED10 (zhang2020atranslocationpathway pages 1-4)
  5. Extracellular glycan lattice formation (mukherjee2025galectin3integratorof pages 1-2, lozinski2024emergingroleof pages 1-2)
  6. Fibrosis via integrin/TGFβRII interactions (calver2024definingthemechanism pages 1-2)

Context-Specific Roles

Strong but context-dependent evidence supports:

  1. Neuroinflammation and neurodegenerative disease (tan2021galectin3akey pages 1-2, siew2024galectin3aggravatesmicroglial pages 1-2, garciarevilla2023galectin3shapestoxic pages 1-2)
  2. Mitophagy (liu2025galectin3directsmitophagy pages 1-2)
  3. Secretory autophagy (burbidge2022lgals3(galectin3) pages 1-2)

Avoid Over-Annotation

Annotations should be cautious or avoided for:

  1. Broad pyroptosis (shivcharan2025endolysosomaldamagesurveillance pages 1-3)
  2. Direct synaptic remodeling (siew2024galectin3aggravatesmicroglial pages 1-2)
  3. Pathology-specific locations like Lewy bodies (garciarevilla2023galectin3shapestoxic pages 1-2)
  4. Developmental roles without strong human evidence (lozinski2024emergingroleof pages 1-2)
  • Prioritize core lectin activity and damage-sensing functions.
  • Distinguish intracellular vs. extracellular roles clearly.
  • Annotate lysophagy and ESCRT-mediated repair with high confidence.
  • Use qualifiers for context-dependent processes like fibrosis, neuroinflammation, and mitophagy.
  • Avoid overextending to weakly supported processes like pyroptosis and synaptic remodeling.

This report provides a comprehensive, evidence-based foundation for GO annotation review of LGALS3, balancing the breadth of LGALS3 biology with the need for precision and context-awareness in annotation.

References

  1. (radziejewska2023galectin3andepithelial pages 1-2): Iwona Radziejewska. Galectin-3 and epithelial muc1 mucin—interactions supporting cancer development. Cancers, 15:2680, May 2023. URL: https://doi.org/10.3390/cancers15102680, doi:10.3390/cancers15102680. This article has 22 citations.

  2. (tan2021galectin3akey pages 1-2): Yinyin Tan, Yanqun Zheng, Daiwen Xu, Zhanfang Sun, Huan Yang, and Qingqing Yin. Galectin-3: a key player in microglia-mediated neuroinflammation and alzheimer's disease. Cell & Bioscience, Apr 2021. URL: https://doi.org/10.1186/s13578-021-00592-7, doi:10.1186/s13578-021-00592-7. This article has 118 citations and is from a peer-reviewed journal.

  3. (mukherjee2025galectin3integratorof pages 1-2): Mana Mohan Mukherjee, Devin Biesbrock, and John A. Hanover. Galectin-3: integrator of signaling via hexosamine flux. Biomolecules, Jul 2025. URL: https://doi.org/10.3390/biom15071028, doi:10.3390/biom15071028. This article has 8 citations.

  4. (jia2020meritacellular pages 1-4): Jingyue Jia, Aurore Claude-Taupin, Yuexi Gu, Seong Won Choi, Ryan Peters, Bhawana Bissa, Michal H. Mudd, Lee Allers, Sandeep Pallikkuth, Keith A. Lidke, Michelle Salemi, Brett Phinney, Muriel Mari, Fulvio Reggiori, and Vojo Deretic. Merit, a cellular system coordinating lysosomal repair, removal and replacement. Autophagy, 16:1539-1541, Jun 2020. URL: https://doi.org/10.1080/15548627.2020.1779451, doi:10.1080/15548627.2020.1779451. This article has 44 citations and is from a domain leading peer-reviewed journal.

  5. (burbidge2022lgals3(galectin3) pages 1-2): Kevin Burbidge, David J. Rademacher, Jessica Mattick, Stephanie Zack, Andrea Grillini, Luc Bousset, Ochan Kwon, Konrad Kubicki, Alexander Simon, Ronald Melki, and Edward M. Campbell. Lgals3 (galectin 3) mediates an unconventional secretion of snca/α-synuclein in response to lysosomal membrane damage by the autophagic-lysosomal pathway in human midbrain dopamine neurons. Autophagy, 18:1020-1048, Oct 2022. URL: https://doi.org/10.1080/15548627.2021.1967615, doi:10.1080/15548627.2021.1967615. This article has 68 citations and is from a domain leading peer-reviewed journal.

  6. (calver2024definingthemechanism pages 1-2): Jessica F. Calver, Nimesh R. Parmar, Gemma Harris, Ryan M. Lithgo, Panayiota Stylianou, Fredrik R. Zetterberg, Bibek Gooptu, Alison C. Mackinnon, Stephen B. Carr, Lee A. Borthwick, David J. Scott, Iain D. Stewart, Robert J. Slack, R. Gisli Jenkins, and Alison E. John. Defining the mechanism of galectin-3–mediated tgf-β1 activation and its role in lung fibrosis. Journal of Biological Chemistry, 300:107300, Jun 2024. URL: https://doi.org/10.1016/j.jbc.2024.107300, doi:10.1016/j.jbc.2024.107300. This article has 42 citations and is from a domain leading peer-reviewed journal.

  7. (shivcharan2025endolysosomaldamagesurveillance pages 1-3): Sonia Shivcharan, Doulathunnisa Ahamed Younis, Skylar S. Wright, Chengliang Wang, Bharat Behl, Patience Shumba, Kristina N. Delgado, Arshmeet K. Chawla, Neal M. Alto, Noorjahan Panjwani, Sivapriya Kailasan Vanaja, Jianbin Ruan, Zhichao Fan, and Vijay A. Rathinam. Endolysosomal damage surveillance enables rapid inflammasome sensing of pathogens. Cell Reports, 44:116002, Aug 2025. URL: https://doi.org/10.1016/j.celrep.2025.116002, doi:10.1016/j.celrep.2025.116002. This article has 3 citations and is from a highest quality peer-reviewed journal.

  8. (siew2024galectin3aggravatesmicroglial pages 1-2): Jian Jing Siew, Hui-Mei Chen, Feng-Lan Chiu, Chia-Wei Lee, Yao-Ming Chang, Hung-Lin Chen, Thi Ngoc Anh Nguyen, Hung-Ting Liao, Mengyu Liu, Hsiao-Tien Hagar, Yung-Chen Sun, Hsing-Lin Lai, Min-Hao Kuo, David Blum, Luc Buée, Lee-Way Jin, Shih-Yu Chen, Tai-Ming Ko, Jie-Rong Huang, Hung-Chih Kuo, Fu-Tong Liu, and Yijuang Chern. Galectin-3 aggravates microglial activation and tau transmission in tauopathy. Journal of Clinical Investigation, Jan 2024. URL: https://doi.org/10.1172/jci165523, doi:10.1172/jci165523. This article has 46 citations and is from a highest quality peer-reviewed journal.

  9. (garciarevilla2023galectin3shapestoxic pages 1-2): Juan García-Revilla, Antonio Boza-Serrano, Yiyun Jin, Devkee M. Vadukul, Jesús Soldán-Hidalgo, Lluís Camprubí-Ferrer, Marta García-Cruzado, Isak Martinsson, Oxana Klementieva, Rocío Ruiz, Francesco A. Aprile, Tomas Deierborg, and José Luis Venero. Galectin-3 shapes toxic alpha-synuclein strains in parkinson’s disease. Acta Neuropathologica, 146:51-75, May 2023. URL: https://doi.org/10.1007/s00401-023-02585-x, doi:10.1007/s00401-023-02585-x. This article has 39 citations and is from a highest quality peer-reviewed journal.

  10. (lozinski2024emergingroleof pages 1-2): Brian M. Lozinski, Khanh Ta, and Yifei Dong. Emerging role of galectin 3 in neuroinflammation and neurodegeneration. Neural Regeneration Research, 19:2004-2009, Dec 2023. URL: https://doi.org/10.4103/1673-5374.391181, doi:10.4103/1673-5374.391181. This article has 35 citations and is from a peer-reviewed journal.

  11. (liu2025galectin3directsmitophagy pages 1-2): Pei-Han Liu, Yu-Shan Lin, Wei-Hua Chu, Wei-Tse Sun, Po-Yu Huang, Jie-rong Huang, and Wei-Chung Chiang. Galectin-3 directs mitophagy in response to parkin-/proteasome-dependent rupture of mitochondrial outer membrane. Biology Direct, Nov 2025. URL: https://doi.org/10.1186/s13062-025-00692-1, doi:10.1186/s13062-025-00692-1. This article has 1 citations and is from a peer-reviewed journal.

  12. (zaborska2023theroleof pages 1-3): Beata Zaborska, Małgorzata Sikora-Frąc, Krzysztof Smarż, Ewa Pilichowska-Paszkiet, Andrzej Budaj, Dariusz Sitkiewicz, and Grażyna Sygitowicz. The role of galectin-3 in heart failure—the diagnostic, prognostic and therapeutic potential—where do we stand? International Journal of Molecular Sciences, 24:13111, Aug 2023. URL: https://doi.org/10.3390/ijms241713111, doi:10.3390/ijms241713111. This article has 103 citations.

  13. (zhang2020atranslocationpathway pages 1-4): Min Zhang, Lei Liu, Xubo Lin, Yang-Ping Wang, Ying Li, Qing Guo, Shulin Li, Yuxin Sun, Xuan Tao, Di Zhang, Xiachen Lv, Li Zheng, and Liang Ge. A translocation pathway for vesicle-mediated unconventional protein secretion. Cell, 181:637-652.e15, Apr 2020. URL: https://doi.org/10.1016/j.cell.2020.03.031, doi:10.1016/j.cell.2020.03.031. This article has 297 citations and is from a highest quality peer-reviewed journal.

  14. (wang2023periplocinsuppressesthe pages 1-2): Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang, Xingyun Wu, Enhao Shen, Li Luo, Changlong Li, Edouard Collins Nice, Canhua Huang, and Bingwen Zou. Periplocin suppresses the growth of colorectal cancer cells by triggering lgals3 (galectin 3)-mediated lysophagy. Autophagy, 19:3132-3150, Jul 2023. URL: https://doi.org/10.1080/15548627.2023.2239042, doi:10.1080/15548627.2023.2239042. This article has 49 citations and is from a domain leading peer-reviewed journal.

  15. (zhang2025multifacetedrolesof pages 10-11): Nan Zhang, Qiao Liu, Daihan Wang, Xiaoyun Wang, Zhaoping Pan, Bo Han, and Gu He. Multifaceted roles of galectins: from carbohydrate binding to targeted cancer therapy. Biomarker Research, Mar 2025. URL: https://doi.org/10.1186/s40364-025-00759-1, doi:10.1186/s40364-025-00759-1. This article has 39 citations and is from a peer-reviewed journal.

Asta

(LGALS3-hypotheses/function-support-go-0001772/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has immunological synapse (GO:0001772). Gene/protein: LGALS3. O... Asta Asta Scientific Corpus Retrieval 11 citations 2026-06-22T04:46:24.012974 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has immunological synapse (GO:0001772). Gene/protein: LGALS3. O...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 11
  • Snippets retrieved: 19

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.759)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 2 (score: 0.737)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 3 (score: 0.737)
    > The immune checkpoint molecules have a vital function in immune surveillance, immune escape, as well as immune editing [19].To further determine the possible oncogenic function of LGALS3 in HCC, the association between LGALS3 and several immunological checkpoints was evaluated.LGALS3 expression showed a significant positive association with CD274, TIGIT, PDCD1, HAVCR2, CTLA4, LAG3, as well as PDCD1LG2 after adjustment for tumor purity in HCC (Fig. 6A-B).Moreover, based on GEPIA2, the same positive association was identified between LGALS3 and these immune checkpoints (Fig. 6C-D).Furthermore, we found that the expression of these immune checkpoints was significantly upregulated in the high LGALS3 expression groups, as shown in Fig. 6E.These findings imply that tumor immune escape may have a role in LGALS3-mediated HCC carcinogenesis.
  • Snippet 4 (score: 0.727)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.
  • Snippet 5 (score: 0.691)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 6 (score: 0.690)
    > Next, the prognostic value of LGALS3 expression in the 23 kinds of cancer patients was then determined.Correlations between LGALS3 expression with OS (overall survival) were evaluated using the GEPIA2 database.In the OS study, only elevated LGALS3 expression indicated poorer survival for HCC patients (Fig. 2A).LGALS3 was not statistically significant for OS of 22 other cancer types patients.Furthermore, DSS (disease-specific survival) LGALS3 in predicting 1-, 3-, and 5-year OS. (H) ROC curve for LGALS3 in predicting 1-, 3-, and 5-year DSS.The higher values of AUC corresponding to higher predictive power.p value < 0.05; **p value < 0.001 was lesser in patients suffering from HCC having higher levels of LGALS3 expression (Fig. 2B).Next, we validated the expression levels of LGALS3 protein in HCC tissues using IF staining.As expected, HCC tumor demonstrated strong LGALS3 expression (Fig. 2C).These findings were further validated by qRT-PCR assay of tumor and adjacent normal tissues from 5 HCC patients.Here, LGALS3 expression was also significantly increased in the HCC tissues (Fig. 2D).In addition, LGALS3 expression was shown to be linked with the pathological stage of HCC, as illustrated in Fig. 2E.High expression of LGALS3 gene is associated with high tumor grade in HCC (Fig. 2F).Moreover, LGALS3 expression was significantly associated with OS and DSS in both univariate and multivariate analyses (Figure S2A-H).Time-dependent ROC analysis showed that the area under the ROC curve was 0.672 at 5 years of OS, and 0.691 at 5 years of DSS (Fig. 2G-H).Taken together, LGALS3 might function as a prospective biomarker for the prognosis of patients suffering from HCC.
  • Snippet 7 (score: 0.687)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.

[2] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.725)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

[3] Galectin-3 aggravates microglial activation and tau transmission in tauopathy

  • Authors: Jian-Jing Siew, Hui-Mei Chen, Feng‐Lan Chiu, Chia-Wei Lee, Yao-Ming Chang et al.
  • Year: 2023
  • Venue: The Journal of Clinical Investigation
  • URL: https://www.semanticscholar.org/paper/8c77eea796475aa4e26a4051432bc4d4c021d847
  • DOI: 10.1172/JCI165523
  • PMID: 37988169
  • PMCID: 10786694
  • Citations: 24
  • Influential citations: 1
  • Summary: It is shown that Gal3 was upregulated in the microglia of humans and mice with tauopathy, and is a potential therapeutic target for tauopathy.
  • Evidence snippets:
  • Snippet 1 (score: 0.700)
    > In particular, the knockout of Gal3 normalized 348 DEG genes between Tau22/Lgals3 +/+ and WT mice (Figure 6, A and B and Supplemental Table 7). Further GO enrichment analysis revealed that the upregulated DEGs of Tau22/Lgals3 +/+ versus WT mice were enriched in multiple processes, including metabolic processes, oxidative reduction processes, and immune system processes (Figure 6, C and D). Importantly, the downregulated DEGs by Lgals3 deletion within the context of Tau22 were primarily enriched in immune responses and the production of cytokines and chemokines (Figure 6E). Conversely, the downregulated DEGs in Tau22/Lgals3 -/-versus Tau22/Lgals3 +/+ mice were enriched in processes including nervous system development, protein phosphorylation, synapse assembly, and learning (Supplemental Figure 21, E and F). No specific enriched processes were identified for the upregulated DEGs in Tau22/Lgals3 -/- versus Tau22/Lgals3 +/+ mice. These findings are consistent with what were observed in human iMGLs, confirming that Gal3 plays a principal role in governing the microglia-mediated immune response in tauopathy.
    > We next categorized these DEGs by their enriched cell type based on the Tabula Muris Consortium database (39) (Supplemental Figure 21D), and, as predicted, we found that the largest population of DEGs identified between Tau22/Lgals3 -/-and Tau22/Lgals3 +/+ mice was enriched in microglia (21.3%; Supple-cells (Figure 8). When encountering pathological tau, microglia become active and release Gal3 into the extracellular space either directly or via EVs (Figure 3O). Under the tested conditions, we found that Gal3 directly facilitated the aggregation of pTau into β-pleated-sheet structures (Figure 3L). This interaction between pTau and Gal3 may occur in EVs and/or the extracellular space between microglia and neurons.
  • Snippet 2 (score: 0.685)
    > Importantly, the loss of Gal3 also prevented the learning and memory deficits present in Tau22/Lgals3 +/+ mice (33) to a great extent, as assessed by the Morris water maze test (Figure 5, H and I). Consistent with the GAM gene analysis (Figure 4, H and I), the number and level of CD68-positive microglia in Tau22/Lgals3 -/-mice were indeed lower than those in Tau22/Lgals3 +/+ mice (Figure 5, J and K), suggesting a key role of Gal3 in microglial activation. Given that synaptic loss is a feature of tauopathy that is also presented in Tau22 mice (33), we performed immunofluorescence staining of synapses at the CA1 region using VGLUT1 and Homer1 as presynaptic and postsynaptic markers, respectively. Our data showed that Gal3 knockout rescued the number of synapses assessed by the colocalization of VGLUT1 and Homer1 (Figure 5, L and M and Supplemental Figure 20, A and B). This finding suggests that GAM mediates the loss of synapses in Tau22 mice.
    > To further delineate the protective role of Gal3 depletion in tauopathy, we analyzed the gene expression profiles of the hippocampi of Tau22/Lgals3 -/-mice and corresponding controls using bulk RNA-Seq. In total, 3,770 DEGs were identified between Tau22/Lgals3 +/+ and WT mice, and 868 DEGs were identified between Tau22/Lgals3 -/-and Tau22/Lgals3 +/+ mice (Supplemental Figure 21, A-D). In particular, the knockout of Gal3 normalized 348 DEG genes between Tau22/Lgals3 +/+ and WT mice (Figure 6, A and B and Supplemental Table 7).

[4] The deficiency of galectin-3 in stromal cells leads to enhanced tumor growth and bone marrow metastasis

  • Authors: J. X. Pereira, Maria Carolina Braga Azeredo, Felipe Sá Martins, R. Chammas, F. L. Oliveira et al.
  • Year: 2016
  • Venue: BMC Cancer
  • URL: https://www.semanticscholar.org/paper/5f5ef422f3c44fa24a457d97d0c915ae8188a279
  • DOI: 10.1186/s12885-016-2679-1
  • PMID: 27526676
  • PMCID: 4986277
  • Citations: 12
  • Influential citations: 1
  • Summary: It is demonstrated for the first time that the absence of galectin-3 in the host microenvironment favors the growth of the primary tumors, the metastatic spread to the inguinal lymph nodes and bone marrow colonization by metastatic 4T1 tumor cells.
  • Evidence snippets:
  • Snippet 1 (score: 0.699)
    > We next investigated whether galectin-3 could influence the development of metastasis to the lymph node. Therefore, 28 days post orthotopic injection (p.o.i) of 4T1 cells in Lgals3+/+ or Lgals3−/− mice, the lymph nodes were excised and the presence of CK-19 positive cells was analyzed by immunohistochemistry. We observed that 4T1 cells (CK-19+) were predominantly present in the capsule of the draining lymph node in Lgals3+/+ mice (Fig. 3a) whereas in Lgals3−/− mice, CK-19+ cells were organized as "sheets-like" within the lymph node parenchyma and also found in the capsule (Fig. 3b). Moreover, we evaluated the presence of lymph node metastasis in Lgals3+/+ and Lgals3−/− mice using the 6-thioguanine clonogenic assay and found significant fewer metastasis in Lgals3+/+ mice in comparison to Lgals3−/− mice, both 21 and 28 days p.o.i. (Fig. 3c, p < 0,05). Interestingly though, we also found an increased CK-19 mRNA levels in Lgals3−/− mice at an earlier stage (15 days) p.o.i. (Fig. 3d, p < 0,05). These results suggest that Lgals3−/− mice are more permissive for 4T1 tumor cells dissemination to the inguinal lymph nodes.
    > Galectin-3-deficient bone marrow microenvironment supports more efficiently the growth of metastatic 4T1
    > We have previously described that Lgals3−/− mice presented structural and functional differences in the bone marrow [17]. Likewise, in this study we confirmed differences in terms of cellularity and projections of bone tissue inside the cavity between Balb/c Lgals3+/+ and Lgals3 −/− mice (Fig. 4a and b).

[5] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.697)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[6] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.695)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.
  • Snippet 2 (score: 0.693)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.

[7] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.694)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[8] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/26255eafb963932be62ecb55d4943930217cb63f
  • DOI: 10.1186/s12868-018-0428-x
  • PMID: 29716523
  • PMCID: 5930520
  • Citations: 7
  • Influential citations: 1
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.692)
    > atlases suggest that Lgals3 expression (at low-to-moderate levels) occurs in both pre-and post-natal brain, and has been localized to regions involved in motor behavior generation, including the cortex, striatum, cerebellum, and spinal cord. We thus argue that Lgals3 loss alters mouse motor function, either through its impact on motor development or through altered neuronal signaling in CNS regions that regulate or produce motor behavior. Further studies examining the consequences of Lgals3 loss at synaptic, neuronal, ensemble, and tissue levels of organization will be required to determine the precise mechanisms underlying this functional loss. Grey bands depict periods where mouse cohorts were tested in the home cage monitoring system. Note that neither axis begins at 0. Sampling interval for x-axis is 7 days except where noted by breakpoints
    > As mentioned earlier, Lgals3 has been implicated in a large number of physiological tasks at both a cellular and organwide level of organization. It is thus notable that mice with complete loss of Lgals3 function demonstrate relatively few behavioral differences when compared to wildtype C57BL/6J mice. This finding suggests that, at least in the mouse, there is some genetic redundancy regarding Lgals3 function. Studies of galectin evolution focusing on intron/exon organization as well as sequence identity suggest that duplication of ancestral galectin genes in animal lineages preceding the first teleost fish [62] provided the precursors for what has become a large vertebrate protein family [63]. There is also data suggesting that galectins may be able to substitute for one another in specific circumstances. For example, Lgals1 may compensate for Lgals3 loss at the spliceosome [64]. Extracellular Lgals1 also regulates T cell apoptosis in a manner similar to that of extracellular Lgals3 [65]. The behavioral phenotype arising from Lgals3 functional loss thus identifies neuronal loci and processes where there is no compensation for gene loss.

[9] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/613a09b176431cdca195e6b3c439b4edbe4f92af
  • DOI: 10.1186/s12868-018-0428-x
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.691)
    > atlases suggest that Lgals3 expression (at low-to-moderate levels) occurs in both pre-and post-natal brain, and has been localized to regions involved in motor behavior generation, including the cortex, striatum, cerebellum, and spinal cord. We thus argue that Lgals3 loss alters mouse motor function, either through its impact on motor development or through altered neuronal signaling in CNS regions that regulate or produce motor behavior. Further studies examining the consequences of Lgals3 loss at synaptic, neuronal, ensemble, and tissue levels of organization will be required to determine the precise mechanisms underlying this functional loss. Grey bands depict periods where mouse cohorts were tested in the home cage monitoring system. Note that neither axis begins at 0. Sampling interval for x-axis is 7 days except where noted by breakpoints
    > As mentioned earlier, Lgals3 has been implicated in a large number of physiological tasks at both a cellular and organwide level of organization. It is thus notable that mice with complete loss of Lgals3 function demonstrate relatively few behavioral differences when compared to wildtype C57BL/6J mice. This finding suggests that, at least in the mouse, there is some genetic redundancy regarding Lgals3 function. Studies of galectin evolution focusing on intron/exon organization as well as sequence identity suggest that duplication of ancestral galectin genes in animal lineages preceding the first teleost fish [62] provided the precursors for what has become a large vertebrate protein family [63]. There is also data suggesting that galectins may be able to substitute for one another in specific circumstances. For example, Lgals1 may compensate for Lgals3 loss at the spliceosome [64]. Extracellular Lgals1 also regulates T cell apoptosis in a manner similar to that of extracellular Lgals3 [65]. The behavioral phenotype arising from Lgals3 functional loss thus identifies neuronal loci and processes where there is no compensation for gene loss.

[10] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.690)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[11] SMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis

  • Authors: Qin Xia, Hanfei Zheng, Yang Li, Wanting Xu, Chengwei Wu et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/7ab13fe72fa12a55aa9304ce52199d1494c8974a
  • DOI: 10.1080/15548627.2023.2267413
  • PMID: 37909662
  • PMCID: 11062382
  • Citations: 20
  • Summary: This study showed that SMURF1 affected lysosomal biogenesis in response to lysosomal damage by preventing TFEB nuclear translocation, and determined that LLOMe-mediated TFEB nuclear import is dependent on SMURF1 under the condition of MTORC1 inhibition.
  • Evidence snippets:
  • Snippet 1 (score: 0.685)
    > Immunofluorescence assay showed that PPP3R1 was also recruited to lysosomes upon LLOMe treatment in a LGALS3-dependent manner (Figure S4A).To identify the role of PPP3R1 in the formation of complex, as expected, we first found that PPP3CB directly binds with PPP3R1 in a LLOMe-enhanced manner (Figure 6A, B).Considering that PPP3CB was directly associated with LGALS3, we also checked the interaction between PPP3R1 and LGALS3.The results showed that PPP3R1 indirectly binds with LGALS3 (Figure 6C).Similarly, LLOMe treatment also promoted the binding affinity between PPP3R1 and LGALS3 (Figure 6D).We next mapped the key interaction domain of LGALS3 with PPP3R1, and showed the NT domain of LGALS3 was essential for the association with PPP3R1 (Figure 6E, F).Furthermore, overexpression of PPP3CB increased, suppression of PPP3CB abolished, the interactions of PPP3R1 and LGALS3 (Figure 6G, H), suggesting PPP3CB is also the bridge for the interaction between LGALS3 and PPP3R1.Interestingly, we also detected that SMURF1 indirectly interacted with PPP3R1, but not MCOLN1, in a LLOMe-enhanced manner (Figure S4B-E).Given that both SMURF1 and PPP3R1 were indirectly bound with the NT domain of LGALS3, we asked whether SMURF1 affected the interactions between PPP3R1 and LGALS3.Our data indicated that suppression of SMURF1 decreased, overexpression of SMURF1 increased, the interactions of PPP3R1 and LGALS3 (Figure 6I, J), suggesting SMURF1 promotes the recruitment of PPP3R1 by LGALS3.We next mapped the key HECT domain of SMURF1 which was essential for interaction with PPP3R1 (Figure 6K, L).

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0002548/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has monocyte chemotaxis (GO:0002548). Gene/protein: LGALS3. Org... Asta Asta Scientific Corpus Retrieval 12 citations 2026-06-22T04:46:30.860784 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has monocyte chemotaxis (GO:0002548). Gene/protein: LGALS3. Org...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 12
  • Snippets retrieved: 20

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.933)
    > Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].According to Table S1, the expression of LGALS3 was statistically positively correlated with several chemokines of immune cells, involving monocytes/macrophages (CCL2, CCL3, CCL5, CCL7, CCL13, CCL17, and CCL22), T lymphocytes (CCL2, CCL1, CCL17, and CCL22), eosinophils (CCL11, CCL26, CCL5, CCL7, CCL13, and CCL3), mast cells (CCR1, CCR2, CCR3, CCR4, CCR5, CXCR2, and CXCR4), and neutrophils (CXCL8).Taken together, these outcomes indicate that LGALS3 is positively associated with immune cell infiltration and cell chemotaxis and could have a crucial function in HCC tumor immune microenvironment.
    > LGALS3 expression correlation and immune cell biomarkers in HCC Next, we wanted to investigate the LGALS3 function in HCC tumor immunity further.Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.
  • Snippet 2 (score: 0.902)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 3 (score: 0.804)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 4 (score: 0.798)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 5 (score: 0.771)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.

[2] Combined High—Throughput Proteomics and Random Forest Machine-Learning Approach Differentiates and Classifies Metabolic, Immune, Signaling and ECM Intra-Tumor Heterogeneity of Colorectal Cancer

  • Authors: C. Contini, B. Manconi, A. Olianas, Giulia Guadalupi, Alessandra Schirru et al.
  • Year: 2024
  • Venue: Cells
  • URL: https://www.semanticscholar.org/paper/b7d8516d42c8108cbdf59e6865a8fb424c450946
  • DOI: 10.3390/cells13161311
  • PMID: 39195201
  • PMCID: 11352245
  • Citations: 6
  • Summary: Different metabolic strategies appeared to be adopted by the two CRC regions to uncouple the Krebs cycle and cytosolic glucose metabolism, promote lipogenesis, promote amino acid synthesis, down-regulate bioenergetics in mitochondria, and up-regulate oxidative stress.
  • Evidence snippets:
  • Snippet 1 (score: 0.871)
    > The regulatory activity on the cytoskeleton carried out by N-WASP is fundamental for the motility of leukocytes. CgA and Gal-3 are associated with GO annotations concerning the chemotaxis of immune cells, including GO:0002551 "mast cell chemotaxis", GO:0002548 "monocyte chemotaxis", and GO:0030593 "neutrophil chemotaxis".

[3] Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis

  • Authors: Runji Chen, D. McVey, D. Shen, Xiaoxin Huang, Shu Ye
  • Year: 2023
  • Venue: Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
  • URL: https://www.semanticscholar.org/paper/472c313e2214a97757712ab0a8b39b133bd6a6bc
  • DOI: 10.1161/JAHA.123.031121
  • PMID: 37815057
  • PMCID: 10757534
  • Citations: 133
  • Influential citations: 2
  • Summary: This review article discusses the 9 VSMC phenotypes that have been reported in atherosclerotic lesions and classifies them into differentiated VSMCs, intermediately dedifferentiated VSMCs, and dedifferentiated VSMCs.
  • Evidence snippets:
  • Snippet 1 (score: 0.844)
    > Lgals3 (also referred to as galectin-3) is considered a marker of macrophage-like cells. 13,31 Rong et al detected a population of VSMCs that expressed Lgals3 following cholesterol loading in vitro. 31 Recently, Alencar et al found that Lgals3 activation is not a specific marker of the differentiation of VSMCs to a macrophage-like state but rather it is a marker of VSMCs entering a transitional state, with increased expression of genes associated with stem cells that are capable of extracellular matrix remodeling. 16 Of note, similar to SEM-like cells, Lgals3 + cells also have increased expression of lymphocyte antigen 6 family member A and vascular cell adhesion molecule 1. Further studies to investigate if SEM-like cells are derived from Lgals3 + cells are warranted.
    > Using mouse, rat, and human models of cholesterolloading in VSMCs, Li et al found that SREBP1 (sterol regulatory-element binding protein-1) and Krüppel-like factor-15 induced up-and downregulation of Lgals3, respectively, via binding to the Lgals3 gene promoter (albeit at different sites). 45 Likewise, Lgals3 promoted SREBP1 gene expression, producing a feedforward loop upregulated by cholesterol loading. 45 Moreover, Lgals3 and SREBP1 downregulated myocardin-related transcription factor A expression in VSMCs. 45 In another study, Owsiany et al used a dual lineage tracing model and found that Lgals3 + VSMCs produce monocyte chemoattractant protein 1, a proinflammatory chemokine. 15 Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15
  • Snippet 2 (score: 0.785)
    > Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15 Another study showed that deletion of the Has3 (smooth muscle cell hyaluronan synthase 3) gene in mouse promoted VSMC transition to a Lgals3 + state. 46
  • Authors: Yaoru Song, S.-W. Pan, Jiahe Tian, Yingying Yu, Siyu Wang et al.
  • Year: 2024
  • Venue: Biomedicines
  • URL: https://www.semanticscholar.org/paper/b05a3ac750e4ab33f0d31bc2708c804f3502f743
  • DOI: 10.3390/biomedicines12061140
  • PMID: 38927347
  • PMCID: 11201226
  • Citations: 5
  • Summary: The activation of monocytes induced by the IFN-γ signaling pathway is an important mechanism underlying the occurrence of irAEs in HCC patients receiving PD-1 inhibition combination therapy.
  • Evidence snippets:
  • Snippet 1 (score: 0.835)
    > We used the AUCell-R package to score the target gene sets.With reference to the relevant literature, we used MONOCYTE CHEMOTAXIS (GO:0002548) for the monocyte chemotaxis score and TYPE II INTERFERON-MEDIATED SIGNALING PATHWAY (GO:0060333) for the IFN-γ signaling pathway score.

[5] Macrophage-derived Spp1 promotes intramuscular fat in dystrophic muscle

  • Authors: Philip K Farahat, Chino Kumagai-Cresse, Raquel L. Aragón, Feiyang Ma, Justin K. Amakor et al.
  • Year: 2025
  • Venue: JCI Insight
  • URL: https://www.semanticscholar.org/paper/25c265aed44730ce4b23491cd7ac24d8c3fcf94b
  • DOI: 10.1172/jci.insight.181946
  • PMID: 40626359
  • PMCID: 12288893
  • Citations: 7
  • Summary: A role for myeloid-derived Spp1 in the differentiation of stromal cells towards an adipogenic fate, leading to accumulation of intramuscular fat in dystrophic muscles is suggested.
  • Evidence snippets:
  • Snippet 1 (score: 0.795)
    > Lgals3 clusters 2 and 3 expressed the highest Spp1. All Spp1-expressing clusters showed a drastic reduction in Spp1 in the cKO (Figure 2B, compare blue and green) (8). Lgals3-2 cells also expressed Arg1 while Lgals3-3 expressed Igf1 (11). The proportion of different monocyte/macrophage subtypes was evaluated in the 2 genotypes (Figure 2, C and D). While the proportion of Lgals3-3 and Lgals3-2 remained similar in the 2 genotypes, a mild increase in Lgals3-1 was observed in the cKO, while both monocyte subclusters slightly decreased in the cKO (Figure 2C). Although the overall number of macrophages increased in the cKO (mdx:969 vs cKO 4,028), cKO macrophages did not show large changes in the cellular frequency of subtypes (Figure 2D). Inflammatory genes were either unchanged or slightly reduced in the cKO, including the chemokines Ccl3 and Ccl4 (Figure 2F) and Tgfb1 (Supplemental Figure 2B). However, IFN genes such as Ifi207, Ifi204, and Isg15 were slightly increased in cKO monocytes (Figure 2F).

[6] Secreted Factors and Extracellular Vesicles Account for the Immunomodulatory and Tissue Regenerative Properties of Bone-Marrow-Derived Mesenchymal Stromal Cells for Osteoarthritis

  • Authors: E. Ragni, C. Perucca Orfei, L. de Girolamo
  • Year: 2022
  • Venue: Cells
  • URL: https://www.semanticscholar.org/paper/b4611c0ee0053b5bd745e5c412143451f2f14a97
  • DOI: 10.3390/cells11213501
  • PMID: 36359897
  • PMCID: 9658264
  • Citations: 12
  • Influential citations: 1
  • Summary: The majority of identified molecules repress the activation of immune cells and the production of OA-related inflammatory mediators, as well as promote cartilage protection by acting on both chondrocytes homeostasis and extracellular matrix-degrading enzymes.
  • Evidence snippets:
  • Snippet 1 (score: 0.790)
    > These were mainly associated with cluster 1 (Figure 4), which included leukocytes (30 overall factors, GO:0030595) and their subtypes: granulocytes (23, GO:0071621), lymphocytes (19, GO:0048247) and monocytes (17, GO:0002548) (Supplementary Figure S1 and Supplementary Table S1B for all analyzed factors). Interestingly, the leukocyte activation term was defined by several players (31, GO:0045321) without the identification of a specific cluster (Supplementary Figure S2 and Supplementary Table S1C for all analyzed factors). In this frame, lymphocytes (18, GO:0046649) and the subcategory T cells (12, GO:0042110) were the most present terms, followed by neutrophils (10, GO:0042119) and macrophages (4, GO:0042116). Using the online tool STRING, protein-protein interaction levels for 24 proteins of the BMSCs Cluster 1 related to the GO term "chemotaxis" for leukocytes, lymphocytes, monocytes and granulocytes were mined. The different colors represent the immune cell type the "chemotaxis" term is associated with. The blue connections are for proteins with known interactions based on curated databases; violet connections for proteins with experimentally determined interactions. Colorless nodes for proteins not related to the GO terms: leukocytes chemotaxis, lymphocytes chemotaxis, monocytes chemotaxis and granulocytes chemotaxis in the STRING database v 11.5. Empty nodes, proteins of unknown 3D structure; filled nodes, known or predicted 3D structure.

[7] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.755)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[8] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.750)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 2 (score: 0.733)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.

[9] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.743)
    > Background: Glioma, the most common brain tumor, is a heterogeneous group of glia-derived tumors, the majority of which have characteristics of diffuse infiltration and immunosuppression. The LGALS protein family is a large class of sugar-binding proteins. Among them, LGALS3 has been reported to promote tumor development and progression in some cancers. However, the clinical significance and biological functions of LGALS3 in glioma remain virtually unknown. The purpose of our research is to detect LGALS3 expression and its prognostic value in glioma and reveal the relationship between its expression and the clinico/molecular-pathological features of patients and immune cell infiltration. Methods: LGALS3 protein expression was examined by immunohistochemistry. The mRNA expression data of LGALS3 was downloaded and analyzed from TCGA and Rembrandt datasets. The association between LGALS3 and glioma clinically relevant diagnostic/molecular markers (IDH, 1p19q, ATRX, MGMT, and TERT) was examined using the Chi-Squared (χ2) test. The correlation between LGALS3 expression and the infiltration of multiple intra-tumoral immune cell types, including B cells (CD20), T cells (CD4 and CD8), macrophages (CD68), and M2 tumor-associated macrophages (CD163), was evaluated by Spearman correlation analysis. Kaplan-Meier analysis and the Cox regression analysis were applied to evaluate the prognostic value of LGALS3 in glioma. The log-rank test was used to evaluate Kaplan-Meier results for significance. Results: Out of all 304 glioma cases, LGALS3 protein was expressed in 125 glioma cases (41.1%, 125/304), with 69.2% (9/13) in WHO I, 9.8% (8/82) in WHO II, 34.2% (26/76) in WHO III, and 61.7% (82/133) in WHO IV. The expression of LGALS3 was correlated with patient age, WHO grade, PHH3 (mitosis), Ki67 index,
  • Snippet 2 (score: 0.738)
    > This may explain why LGALS3 positive glioma patients have a significantly shorter OS than LGALS3 negative patients, suggesting that LGALS3 may play a role in malignant progression in glioma through changing the immune microenvironment in glioma. Some studies have also confirmed that LGALS3 played a key role in glioma development through increasing cell motility and invasion (21,22). Vladimirova et al. (23) found that LGALS3 expression was mediated by Runx-2 transcription factors, which contributed to the malignant progression of glial tumors. Conversely, only Gordower et al. (24) reported that LGALS3 expression decreased as the WHO level increased in astrocytic tumors. We think the reason for this difference may be partially due to the small number of patient samples in their study. Moreover, online database analysis also verified our results. Patients with high expression of LGALS3 mRNA had a poor prognosis.
    > LGALS3 was closely related to IDH status, CD163+ TAMs and was mainly expressed in IDH wild-type glioma. It is worth noting that LGALS3 mRNA was highly expressed in the mesenchymal subtype, a more malignant TCGA GBM subtype with a higher tendency for recurrence, metastasis, and increased vascularity.
    > Most importantly, we found that LGALS3 was involved in the regulation of the glioma immune microenvironment, particularly CD163+ TAMs. There is growing evidence that complex tumor microenvironments contribute to the malignant progression of gliomas (25,26). Among the components of the tumor microenvironment, tumor-associated macrophages (TAMs) are considered to provide important support for tumor growth. Macrophages are divided into M1 and M2 subtypes according to their functions. Typically, CD68 is a general marker for macrophages, while CD163 is considered to be a highly specific marker for M2 type macrophages.
  • Snippet 3 (score: 0.733)
    > In the LGALS family, LGALS3 has a special domain that recognizes and binds to β-galactosides on cellular glycoproteins and glycolipids (5).
    > LGALS3 may be observed in the cytoplasm and in the nucleus as well as the extracellular matrix (6). It serves different biological functions, such as cell growth, cell adhesion, angiogenesis, and apoptosis (7).
    > LGALS3 can be expressed in different types of tumors, and accumulating evidence has proved that LGALS3 plays a vital role in tumorigenesis and development (6,(8)(9)(10)(11)(12)(13)(14)(15)(16). Recently, a study indicated that LGALS3 can promote the therapeutic resistance of glioblastoma and is related to tumor risk and prognosis (17). However, its prognostic significance needs to be further confirmed in large glioma samples, and, hitherto, no studies have explored the role of LGALS3 in the glioma immune microenvironment and its correlation with key molecular markers, including isocitrate dehydrogenase 1 (IDH1), alpha-thalassemia/mental retardation X-linked (ATRX), O-6methylguanine-DNA methyltransferase (MGMT), telomerase reverse transcriptase (TERT), and 1p19q.

[10] Impairment of lysosomal quality control in Huntington disease

  • Authors: P. Rusmini, F. Mina, M. Valenza, Martina Vitali, V. Ferrari et al.
  • Year: 2025
  • Venue: Cell Death & Disease
  • URL: https://www.semanticscholar.org/paper/c874bbb3c9e6aa0a3f74519c022f3fa822daf4a8
  • DOI: 10.1038/s41419-025-08103-z
  • PMID: 41145409
  • PMCID: 12559425
  • Citations: 4
  • Influential citations: 1
  • Summary: TFEB and TFE3 are sequestered in muHTT aggregates, and muHTT proteins associates with LMP triggering the translocation of LGALS3 to the lumen of lysosomes, with a close relation between polyQ size and severity of these events.
  • Evidence snippets:
  • Snippet 1 (score: 0.739)
    > In HD, high levels of LGALS3 have been found in plasma and brain of patients and mice. LGALS3 upregulation was observed in HD mice before the motor symptoms, in the microglia LGALS3 was found associated to damaged lysosomes and its suppression in microglia ameliorated the HD mice phenotype [36].
    > LGALS3 is emerging as a key factor for NDs for its intracellular role in lysosomal damage, but also for its functions linked to its secretion in the extracellular space. Many pieces of evidence suggest its detrimental role in neurodegeneration, even if a protective role of LGALS3 has been reported (reviewed in ref. [75]). LGALS3 mechanisms of action need further investigation but its pharmacological modulation might represent a valuable target for intervention for NDs. LGALS3 inhibitors have already been tested in metabolic and fibrotic diseases, and these approaches might be applied to NDs. 3′-bis-(4aryltriazol-1-yl) thiodigalactoside (GB039, formerly named TD139), a synthetic small molecule that antagonizes LGALS3 activity by binding to the carbohydrate recognition domain, was effective in idiopathic pulmonary fibrosis and retinal degeneration [76,77]. Pectins, plant cell wall polysaccharides, mostly obtained from citrus and apples, represent natural LGALS3 inhibitors [78,79].
    > In summary, our experiments suggest that LQC impairment might contribute to HD. Indeed, the LGALS3 accumulation observed in HD cellular models due to TFEB and TFE3 sequestration by muHTT inclusions causes LMP and lysophagy impairment, in turn, influences LQC.
    > Fig. 8 TFEB and TFE3 sequestration affects the LQC. A, B NSC-34 cells were transfected with wt or muHTT.

[11] Citrus pectin modulates chicken peripheral blood mononuclear cell proteome in vitro

  • Authors: G. Ávila, M. Bonnet, D. Viala, S. Déjean, G. Grilli et al.
  • Year: 2024
  • Venue: Poultry Science
  • URL: https://www.semanticscholar.org/paper/6755550163f80e4863389b3402bd6ac0b5ac8aa0
  • DOI: 10.1016/j.psj.2024.104293
  • PMID: 39288719
  • PMCID: 11421475
  • Citations: 1
  • Summary: The results provide a proteomics background to the anti-inflammatory activity of CP, demonstrating that the in vitro downregulation of phagocytosis and chemotaxis is related to changes in proteins related to the cytoskeleton.
  • Evidence snippets:
  • Snippet 1 (score: 0.738)
    > Specifically, MARCKS has been shown to promote murine macrophage migration (Green et al., 2012), phagocytosis (Carballo et al., 1999), and proinflammatory cytokines production (Lee et al., 2015), confirming its involvement in modulating inflammation. Some proteins were also less abundant in the CP group. Galectin-3 (LGALS3) and galectin-8 (LGALS8) are ubiquitous carbohydrate-binding proteins (Brinchmann et al., 2018) that participate in several cellular processes, such as inflammation, immune responses, cell migration, autophagy, and cell signaling. In chickens, 5 members have been identified (Kaltner et al., 2011): LGALS3 and LGALS. LGALS3 is highly expressed in monocytes and macrophages and is a potent regulator of cell-extracellular matrix (ECM) and cell-cell interactions, migration, and phagocytosis (Lu et al., 2017). The decreased abundance of LGALS3 in the CP group is also remarkable, as mouse LGALS3 was downregulated by modified citrus pectin (MCP)-a derivative of citrus pectin (Kolatsi-Joannou et al., 2011). MCP also directly inhibits LGALS3, decreasing the adhesion of monocytes and macrophages (Lu et al., 2017). LGALS8 is involved in cytoskeleton reorganization processes, cell adhesion, and cell migration, as well as in autophagy and cytokines and chemokines expression (Gentilini et al., 2017;Johannes et al., 2018). Finally, we also identified proteins involved in the positive regulation of T and B cell proliferation (TFRC) (Ned et al., 2003) and human mononuclear cell migration (AHNAK2) (Zheng et al., 2021), further supporting the CP immune-modulatory function.

[12] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.733)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0005634/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has nucleus (GO:0005634). Gene/protein: LGALS3. Organism: Homo... Asta Asta Scientific Corpus Retrieval 12 citations 2026-06-22T04:46:01.863834 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has nucleus (GO:0005634). Gene/protein: LGALS3. Organism: Homo...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 12
  • Snippets retrieved: 20

Relevant Papers

[1] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.779)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.
  • Snippet 2 (score: 0.764)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 3 (score: 0.738)
    > Therefore, periplocininduced lysophagy-mediated clearance of damaged lysosomes can nonspecifically engulf vicinal functional lysosomes when lysosome fusion occurs, leading to excessive lysophagy and subsequent cell death. Our findings thus demonstrate a cytotoxic mechanism of lysophagy, and suggest a contextdependent manner for lysophagy-mediated cell fate decision. In addition, we found that periplocin treatment promoted the translocation of TFEB (transcription factor EB) into the nucleus (Figure S7A,B). Interestingly, periplocin treatment led to increased TFEB nuclear translocation and LGALS3 expression both in a time-dependent manner. While the protein level of LGALS3 increased at 1 h of periplocin treatment, the level of nuclear TFEB increased at 3-6 h after periplocin treatment (Figure S7C,D). These data imply that TFEB nuclear translocation and activation in periplocin-treated CRC cells may represent a compensate mechanism for lysosomal damage through promoting the lysosomal biogenesis.
    > Target identification is the initial and critical step for understanding the mechanism of action and development of novel natural products [50,56]. In this study, we found periplocin physically engaged LGALS3 in living CRC cells, suggesting LGALS3 is a binding target of periplocin. Further studies are needed to confirm the direct binding using recombinant LGALS3 protein. The binding of periplocin inhibited ubiquitin-mediated degradation of LGALS3, leading to elevated protein level of LGALS3. Periplocin binding might affect the conformational change of LGALS3 and decrease its binding with related E3 ligase, thereby preventing ubiquitin-mediated degradation of LGALS3, which also requires further investigation. Upregulated LGALS3 was then recruited to the lysosomes following periplocin treatment to initiate excessive lysophagy machinery.
  • Snippet 4 (score: 0.725)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.
  • Snippet 5 (score: 0.705)
    > As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3. In addition, periplocin did not affect the ubiquitination of other proteins, such as PHGDH (phosphoglycerate dehydrogenase) and PRMT1 (protein arginine methyltransferase 1) (Figure S6B,C), and had no obvious effect on the expression of several essential proteasome components (Figure S6D,E). These data suggest that periplocin specifically prevents LGALS3 from ubiquitin-mediated degradation, regardless of the general ubiquitylation status of the proteasome. A previous study of systematic ubiquitination profiling identified Lys196 (K196) and Lys210 (K210) as the potential ubiquitination sites of LGALS3 [47]. To determine the ubiquitination site required without 0.50 μM periplocin for 24 h. (D) Immunoblotting analysis of PRKAA, p-PRKAA (Thr172), ACACA, p-ACACA (Ser79), MTOR, and p-MTOR (Ser2448) in cells treated with periplocin for 24 h at the indicated concentrations. (E and F) Reciprocal co-immunoprecipitation analysis of the interaction between endogenous LGALS3 and TRIM16 in cells treated with or without 0.50 μM periplocin for 24 h. (G) Co-immunoprecipitation analysis of the interaction between endogenous LGALS3 with PDCD6IP/Alix, CHMP4B, and TRIM16 in DLD-1 cells treated with 0.50 μM periplocin at different time periods. (H) Immunofluorescent analysis of the colocalization of LC3B with LGALS3 in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm.

[2] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.767)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[3] Impairment of lysosomal quality control in Huntington disease

  • Authors: P. Rusmini, F. Mina, M. Valenza, Martina Vitali, V. Ferrari et al.
  • Year: 2025
  • Venue: Cell Death & Disease
  • URL: https://www.semanticscholar.org/paper/c874bbb3c9e6aa0a3f74519c022f3fa822daf4a8
  • DOI: 10.1038/s41419-025-08103-z
  • PMID: 41145409
  • PMCID: 12559425
  • Citations: 4
  • Influential citations: 1
  • Summary: TFEB and TFE3 are sequestered in muHTT aggregates, and muHTT proteins associates with LMP triggering the translocation of LGALS3 to the lumen of lysosomes, with a close relation between polyQ size and severity of these events.
  • Evidence snippets:
  • Snippet 1 (score: 0.748)
    > In HD, high levels of LGALS3 have been found in plasma and brain of patients and mice. LGALS3 upregulation was observed in HD mice before the motor symptoms, in the microglia LGALS3 was found associated to damaged lysosomes and its suppression in microglia ameliorated the HD mice phenotype [36].
    > LGALS3 is emerging as a key factor for NDs for its intracellular role in lysosomal damage, but also for its functions linked to its secretion in the extracellular space. Many pieces of evidence suggest its detrimental role in neurodegeneration, even if a protective role of LGALS3 has been reported (reviewed in ref. [75]). LGALS3 mechanisms of action need further investigation but its pharmacological modulation might represent a valuable target for intervention for NDs. LGALS3 inhibitors have already been tested in metabolic and fibrotic diseases, and these approaches might be applied to NDs. 3′-bis-(4aryltriazol-1-yl) thiodigalactoside (GB039, formerly named TD139), a synthetic small molecule that antagonizes LGALS3 activity by binding to the carbohydrate recognition domain, was effective in idiopathic pulmonary fibrosis and retinal degeneration [76,77]. Pectins, plant cell wall polysaccharides, mostly obtained from citrus and apples, represent natural LGALS3 inhibitors [78,79].
    > In summary, our experiments suggest that LQC impairment might contribute to HD. Indeed, the LGALS3 accumulation observed in HD cellular models due to TFEB and TFE3 sequestration by muHTT inclusions causes LMP and lysophagy impairment, in turn, influences LQC.
    > Fig. 8 TFEB and TFE3 sequestration affects the LQC. A, B NSC-34 cells were transfected with wt or muHTT.

[4] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.747)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 2 (score: 0.742)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[5] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.732)
    > In the LGALS family, LGALS3 has a special domain that recognizes and binds to β-galactosides on cellular glycoproteins and glycolipids (5).
    > LGALS3 may be observed in the cytoplasm and in the nucleus as well as the extracellular matrix (6). It serves different biological functions, such as cell growth, cell adhesion, angiogenesis, and apoptosis (7).
    > LGALS3 can be expressed in different types of tumors, and accumulating evidence has proved that LGALS3 plays a vital role in tumorigenesis and development (6,(8)(9)(10)(11)(12)(13)(14)(15)(16). Recently, a study indicated that LGALS3 can promote the therapeutic resistance of glioblastoma and is related to tumor risk and prognosis (17). However, its prognostic significance needs to be further confirmed in large glioma samples, and, hitherto, no studies have explored the role of LGALS3 in the glioma immune microenvironment and its correlation with key molecular markers, including isocitrate dehydrogenase 1 (IDH1), alpha-thalassemia/mental retardation X-linked (ATRX), O-6methylguanine-DNA methyltransferase (MGMT), telomerase reverse transcriptase (TERT), and 1p19q.

[6] Lgals3 Promotes Calcium Oxalate Crystal Formation and Kidney Injury Through Histone Lactylation‐Mediated FGFR4 Activation

  • Authors: Zehua Ye, Yushi Sun, Songyuan Yang, Lei Li, Bojun Li et al.
  • Year: 2025
  • Venue: Advanced Science
  • URL: https://www.semanticscholar.org/paper/adbfa30b5832407d200a5eade9196d41be08050e
  • DOI: 10.1002/advs.202413937
  • PMID: 39903812
  • PMCID: 11947994
  • Citations: 18
  • Summary: Findings suggest that Lgals3 may play a key role in CaOx stone formation and kidney injury by interacting with PKM2 and promoting both H3K18la‐mediated gene transcription and activation.
  • Evidence snippets:
  • Snippet 1 (score: 0.729)
    > Furthermore, this study investigated whether Lgals3 deficiency reduced H3K18la during CaOx deposition. Western blot and immunofluorescence staining showed that Lgals3 knockdown in vitro decreased the levels of global lactylation and H3K18la levels (Figure 9E-G). Similarly, Lgals3 −/− mice exhibited significant decreases in global lactylation and H3K18la levels compared with the WT mice through Western blot and immunofluorescence staining (Figure 9H-J). Meanwhile, we also tested the level of acetylation of histone H3 and histone H4 and the results showed that Lgals3 deficiency have no impact on the expression of acetylation of histone H3 and histone H4 (Figure S9, Supporting Information)

[7] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.726)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 2 (score: 0.724)
    > Next, the prognostic value of LGALS3 expression in the 23 kinds of cancer patients was then determined.Correlations between LGALS3 expression with OS (overall survival) were evaluated using the GEPIA2 database.In the OS study, only elevated LGALS3 expression indicated poorer survival for HCC patients (Fig. 2A).LGALS3 was not statistically significant for OS of 22 other cancer types patients.Furthermore, DSS (disease-specific survival) LGALS3 in predicting 1-, 3-, and 5-year OS. (H) ROC curve for LGALS3 in predicting 1-, 3-, and 5-year DSS.The higher values of AUC corresponding to higher predictive power.p value < 0.05; **p value < 0.001 was lesser in patients suffering from HCC having higher levels of LGALS3 expression (Fig. 2B).Next, we validated the expression levels of LGALS3 protein in HCC tissues using IF staining.As expected, HCC tumor demonstrated strong LGALS3 expression (Fig. 2C).These findings were further validated by qRT-PCR assay of tumor and adjacent normal tissues from 5 HCC patients.Here, LGALS3 expression was also significantly increased in the HCC tissues (Fig. 2D).In addition, LGALS3 expression was shown to be linked with the pathological stage of HCC, as illustrated in Fig. 2E.High expression of LGALS3 gene is associated with high tumor grade in HCC (Fig. 2F).Moreover, LGALS3 expression was significantly associated with OS and DSS in both univariate and multivariate analyses (Figure S2A-H).Time-dependent ROC analysis showed that the area under the ROC curve was 0.672 at 5 years of OS, and 0.691 at 5 years of DSS (Fig. 2G-H).Taken together, LGALS3 might function as a prospective biomarker for the prognosis of patients suffering from HCC.
  • Snippet 3 (score: 0.710)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[8] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.723)
    > s3 +/+ ), heterozygous (Lgals3-R200S KI/+ ), and homozygous (Lgals3-R200S KI/KI ) mutant mice (Fig. 1C). Consistent with a reduction in Gal-3 secretion, we observed significantly reduced Gal-3 protein levels in the plasma of adult heterozygous and homozygous mutant mice (Fig. 1D).
    > We generated mouse embryonic fibroblasts (MEFs) to look at cell-surface proteins, to confirm reduction of extracellular Gal-3 protein in Lgals3-R200S cells. Cell surface proteins were biotinylated and captured with NeutrAvidin Agarose. Western blot analysis showed cell surface Gal-3 levels were decreased in Lgals3-R200S KI/+ and Lgals3-R200S KI/KI cells compared to wild-type (Fig. 1E). The absence of the cytoplasmic protein, vinculin, from the pull-down lanes confirmed that the experiments worked to preferentially pull-down biotinylated cell surface proteins. Immunocytochemistry of MEFs from Lgals3-R200S KI/KI mice confirmed that Gal-3 is present in the cytosol and nucleus (Fig. 1F). Quantification of the mean and median amount of fluorescence per unit area indicated that Galectin-3 both on the cell surface and inside the cell was reduced, by approximately 30% and 26% respectively, in Lgals3-R200S KI/KI MEFs (P = 0.024). From these studies, we conclude that the R200S mutation in mice reduced cell surface Gal-3 and may have contributed to lower intracellular Gal-3 levels. Further studies will be necessary to determine if the 25-30% reduction in intracellular Gal-3 is biologically significant.
  • Snippet 2 (score: 0.720)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

[9] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.711)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[10] Galectin-3 aggravates microglial activation and tau transmission in tauopathy

  • Authors: Jian-Jing Siew, Hui-Mei Chen, Feng‐Lan Chiu, Chia-Wei Lee, Yao-Ming Chang et al.
  • Year: 2023
  • Venue: The Journal of Clinical Investigation
  • URL: https://www.semanticscholar.org/paper/8c77eea796475aa4e26a4051432bc4d4c021d847
  • DOI: 10.1172/JCI165523
  • PMID: 37988169
  • PMCID: 10786694
  • Citations: 24
  • Influential citations: 1
  • Summary: It is shown that Gal3 was upregulated in the microglia of humans and mice with tauopathy, and is a potential therapeutic target for tauopathy.
  • Evidence snippets:
  • Snippet 1 (score: 0.710)
    > In particular, the knockout of Gal3 normalized 348 DEG genes between Tau22/Lgals3 +/+ and WT mice (Figure 6, A and B and Supplemental Table 7). Further GO enrichment analysis revealed that the upregulated DEGs of Tau22/Lgals3 +/+ versus WT mice were enriched in multiple processes, including metabolic processes, oxidative reduction processes, and immune system processes (Figure 6, C and D). Importantly, the downregulated DEGs by Lgals3 deletion within the context of Tau22 were primarily enriched in immune responses and the production of cytokines and chemokines (Figure 6E). Conversely, the downregulated DEGs in Tau22/Lgals3 -/-versus Tau22/Lgals3 +/+ mice were enriched in processes including nervous system development, protein phosphorylation, synapse assembly, and learning (Supplemental Figure 21, E and F). No specific enriched processes were identified for the upregulated DEGs in Tau22/Lgals3 -/- versus Tau22/Lgals3 +/+ mice. These findings are consistent with what were observed in human iMGLs, confirming that Gal3 plays a principal role in governing the microglia-mediated immune response in tauopathy.
    > We next categorized these DEGs by their enriched cell type based on the Tabula Muris Consortium database (39) (Supplemental Figure 21D), and, as predicted, we found that the largest population of DEGs identified between Tau22/Lgals3 -/-and Tau22/Lgals3 +/+ mice was enriched in microglia (21.3%; Supple-cells (Figure 8). When encountering pathological tau, microglia become active and release Gal3 into the extracellular space either directly or via EVs (Figure 3O). Under the tested conditions, we found that Gal3 directly facilitated the aggregation of pTau into β-pleated-sheet structures (Figure 3L). This interaction between pTau and Gal3 may occur in EVs and/or the extracellular space between microglia and neurons.

[11] Enhanced cortical bone expansion in Lgals3-deficient mice during aging

  • Authors: Kevin A. Maupin, Kevin Weaver, Alexis Bergsma, Cheryl Christie, Z. Zhong et al.
  • Year: 2018
  • Venue: Bone Research
  • URL: https://www.semanticscholar.org/paper/186b9fa98d1dd1342931f3b02765fa78aecd0100
  • DOI: 10.1038/s41413-017-0003-6
  • PMID: 30886760
  • PMCID: 6416267
  • Citations: 15
  • Summary: Investigation of bone cells showed the increase was probably due to increased bone formation, rather than decreased bone resorption, and the researchers conclude that disrupting galectin-3 may help to prevent aging-related bone loss.
  • Evidence snippets:
  • Snippet 1 (score: 0.706)
    > Mice from this cross were then crossed to mice homozygous for the Crerecombinase transgene under control of the CMV enhancer [BALB/ c-Tg(CMV-cre)1Cgn/J] to remove exon 4 which was flanked with loxP sites. These mice were then crossed to a wild-type C57BL/6J mouse to remove the Cre transgene to obtain Lgals3 Δ/+ heterozygous mice. These heterozygotes were set up into breeding pairs to generate litters containing wild type (Lgals3 +/ + ), heterozygous (Lgals3 Δ/+ ) and homozygous mutant (Lgals3 Δ/Δ ) offspring.
    > We verified loss of galectin-3 protein in these mice by western blot of lung lysates using a Mac-2/galectin-3 rat monoclonal antibody 59 (gift from John Wang, MSU, E. Lansing, MI) which recognizes an that is N-terminal of the region encoded by exon 4. 60 No protein product corresponding to full-length or truncated galectin-3 was detected from lung lysates of Lgals3 Δ/Δ mice. The additional benefits of using Lgals3 Δ/Δ mice is that they avoid potential transcriptional effects on neighboring genes by a neomycin resistance cassette 61 ; also, the genomic deletion is downstream from the galectin-3 internal gene, Galig, which utilizes a promoter in intron 2 and encodes a small protein via an alternative open reading frame of exon 3 of Lgals3. 62,63 Figure 2 shows the null alleles utilized in this study. Genomic DNA was isolated from tail clips at weaning and necropsy by proteinase K digestion and ethanol precipitation. Genotypes were assigned by allele specific PCR.

[12] SREBP1 regulates Lgals3 activation in response to cholesterol loading

  • Authors: Jing Li, Hongtao Shen, G. Owens, Lian‐Wang Guo
  • Year: 2022
  • Venue: Molecular Therapy. Nucleic Acids
  • URL: https://www.semanticscholar.org/paper/6c55d666855233ff0e7035d46075997924da854c
  • DOI: 10.1016/j.omtn.2022.05.028
  • PMID: 35694209
  • PMCID: 9168384
  • Citations: 13
  • Summary: Results identify a previously uncharacterized cholesterol-responsive dyad—SREBP1 and LGALS3, constituting a feedforward circuit that can be blocked by BETs inhibition in SMC phenotypic transition and potential interventional targets.
  • Evidence snippets:
  • Snippet 1 (score: 0.706)
    > Beyond this knowledge, our data contributed new information showing that LGALS3 decreased expression of MRTF-A protein, a well-established transcription co-activator of SMC contractile genes. Collectively, our results and existing reports suggest that rather than merely a cell-type marker, LGALS3 is a key effector that promotes cholesterol-induced SMC phenotypic states, including migration, inflammation, dedifferentiation, lipid storage, and resistance to apoptosis (Figure S3). Moreover, we identified it as an atypical target gene of both SREBP1 and KLF15. In addition, we observed that LGALS3 promotes SREBP1 expression but represses KLF15 production. Our coIP experiments did not show an obvious LGALS3/ SREBP1 physical association, although it has been reported that
    > LGALS3 participates in nuclear function, such as forming an early splicing machinery. 29 However, it will be important that future studies determine how LGALS3 regulates SREBP1 and KLF15 expression.
    > In view of the SREBP1/LGALS3/SREBP1 feedforward circuit identified herein, and previous evidence that SMCs with activated Lgals3 preferentially give rise to atherosclerotic lesion cells, 4 it is interesting to consider LGALS3 as a potential interventional target for breaking this vicious cycle. However, the effectiveness of using an
    > 6][47] In contrast, BETs inhibition with JQ1 abrogated cholesterol-induced increases of
    > LGALS3 and SREBP1 protein levels, in rodent SMCs and also in human primary SMCs. This potent effect implicates an alternative strategy to inhibit this SREBP1/LGALS3 pathway. BETs inhibitors have shown anti-atherogenic efficacy in preclinical models. 35,40 In a phase II clinical trial, the pan-BETs inhibitor RVX208, which is known to increase apolipoprotein A-I, 48 has exhibited a favorable profile of safety and efficacy in amelioration of major adverse cardiovascular events. 49

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Asta

(LGALS3-hypotheses/function-support-go-0005737/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has cytoplasm (GO:0005737). Gene/protein: LGALS3. Organism: Hom... Asta Asta Scientific Corpus Retrieval 14 citations 2026-06-22T04:46:09.421820 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has cytoplasm (GO:0005737). Gene/protein: LGALS3. Organism: Hom...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 14
  • Snippets retrieved: 20

Relevant Papers

[1] Physical Activity Attenuates the Obesity-Induced Dysregulated Expression of Brown Adipokines in Murine Interscapular Brown Adipose Tissue

  • Authors: T. Sakurai, Toshiyuki Fukutomi, Sachiko Yamamoto, Eriko Nozaki, T. Kizaki
  • Year: 2021
  • Venue: International Journal of Molecular Sciences
  • URL: https://www.semanticscholar.org/paper/c62f909c1038a72ef7c427bfa9914983c22b5422
  • DOI: 10.3390/ijms221910391
  • PMID: 34638731
  • PMCID: 8508858
  • Citations: 2
  • Summary: Results indicate that PA attenuates the obesity-induced dysregulated expression of brown adipokines and suggests that Lgals3 and Lgal3bp are involved in brown adipocyte differentiation.
  • Evidence snippets:
  • Snippet 1 (score: 0.790)
    > In addition, although the Flag-tagged Lgals3 protein was secreted at each stage of brown adipocyte differentiation, most of this protein was uniformly present in the cytoplasm (Figure 1D). Furthermore, the expression of Flag-tagged Lgals3bp in the cytoplasm was heterogeneous compared with that of the Flag-tagged Lgals3 protein (Figure 1D).
  • Snippet 2 (score: 0.723)
    > Enhanced expression of Lgals3 gene is found in the WAT and the BAT of obese mice, and the insulin signal was reported to be altered in the WAT of Lgals3 knock out (KO) mice, but the influence of Lgals3 on brown adipocytes remains unknown [41,42]. Lgals3bp was identified as a protein that binds to Lgals3 and Lgals1, but its effect on brown adipocytes is also unknown [43]. As shown in Table 3, the expressions of genes for Lgals3 and Lgals3bp are thought to be greatly influenced by HFD intake and PA. Therefore, we attempted to establish an overexpression of Flag-tagged Lgals3 and Lgals3bp in HB2 cells. Real-time PCR analysis showed a significant increase in the expressions of Lgals3 and Lgals3bp mRNAs in Flag-tagged Lgals3 (HB2-L3 cells), Lgals3bp (HB2-L3bp cells), or both (HB2-L3-L3bp cells) when compared with that in control cells (HB2-C cells) (Figure 1A). Moreover, expression of exogenous Flag-tagged proteins in cell lysate and Flag-Lgals3 or Lgals3bp protein secretion into cell culture medium were confirmed in HB2-L3, -L3bp, and -L3-L3bp cells (Figure 1B). As shown in Figure 1B,C, in the differentiation process of HB2 cells into brown adipocytes, Flag-tagged Lgals3 protein was secreted the most during the early stages of differentiation, while the secretion from mature brown adipocytes was decreased by comparison. In contrast, the secretion of the Flag-tagged Lgals3bp protein from mature brown adipocytes was the most prominent. In addition, although the Flag-tagged Lgals3 protein was secreted at each stage of brown adipocyte differentiation, most of this protein was uniformly present in the cytoplasm (Figure 1D).

[2] Selection signature analysis reveals genes underlying sheep milking performance

  • Authors: Zehu Yuan, Wanhong Li, Fadi Li, X. Yue
  • Year: 2019
  • Venue: Archives Animal Breeding
  • URL: https://www.semanticscholar.org/paper/fd4b15d018bfa94628954941797606d5d92cecb8
  • DOI: 10.5194/aab-62-501-2019
  • PMID: 31807661
  • PMCID: 6859915
  • Citations: 7
  • Summary: SUCNR1 and PPARGC1A (PPARG coactivator 1 alpha) may be the most significant genes that affect sheep milking performance, which supply a significant indication for future studies to investigate candidate genes that play an important role in milk production and quality.
  • Evidence snippets:
  • Snippet 1 (score: 0.783)
    > The most significant GO term of CC is cytoplasm (GO: 0005737, P =6.93E10-8, FDR = 2.98 × 10 −5 ). The most significant GO term of MF was the G-protein coupled nucleotide receptor activity (GO: 0001608, P = 6.37007×10 −5 , FDR = 6.37007×10 −5 ) and G-protein coupled purinergic nucleotide receptor activity (GO: 0045028, P = 6.37007 × 10 −5 , FDR = 6.37007 × 10 −5 ). The finding that the cytoplasm GO term (GO: 0005737) was enriched in our gene set is interesting. Previous studies have reported that candidate genes associated with milk protein composition traits in a Chinese Holstein population were significantly (FDR = 0.0247) enriched in cytoplasm (GO: 0005737) (Zhou et al., 2019). Apart from GO analysis, KEGG analysis showed that candidate genes could be annotated to 36 KEGG classes (Fig. S1) and could participate in 173 pathways. The highest number of genes of KEGG categories was signal transduction (29 genes). However, no significant pathways were found.

[3] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.756)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.
  • Snippet 2 (score: 0.701)
    > s3 +/+ ), heterozygous (Lgals3-R200S KI/+ ), and homozygous (Lgals3-R200S KI/KI ) mutant mice (Fig. 1C). Consistent with a reduction in Gal-3 secretion, we observed significantly reduced Gal-3 protein levels in the plasma of adult heterozygous and homozygous mutant mice (Fig. 1D).
    > We generated mouse embryonic fibroblasts (MEFs) to look at cell-surface proteins, to confirm reduction of extracellular Gal-3 protein in Lgals3-R200S cells. Cell surface proteins were biotinylated and captured with NeutrAvidin Agarose. Western blot analysis showed cell surface Gal-3 levels were decreased in Lgals3-R200S KI/+ and Lgals3-R200S KI/KI cells compared to wild-type (Fig. 1E). The absence of the cytoplasmic protein, vinculin, from the pull-down lanes confirmed that the experiments worked to preferentially pull-down biotinylated cell surface proteins. Immunocytochemistry of MEFs from Lgals3-R200S KI/KI mice confirmed that Gal-3 is present in the cytosol and nucleus (Fig. 1F). Quantification of the mean and median amount of fluorescence per unit area indicated that Galectin-3 both on the cell surface and inside the cell was reduced, by approximately 30% and 26% respectively, in Lgals3-R200S KI/KI MEFs (P = 0.024). From these studies, we conclude that the R200S mutation in mice reduced cell surface Gal-3 and may have contributed to lower intracellular Gal-3 levels. Further studies will be necessary to determine if the 25-30% reduction in intracellular Gal-3 is biologically significant.

[4] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.738)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[5] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.734)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 2 (score: 0.728)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.
  • Snippet 3 (score: 0.716)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.

[6] Impairment of lysosomal quality control in Huntington disease

  • Authors: P. Rusmini, F. Mina, M. Valenza, Martina Vitali, V. Ferrari et al.
  • Year: 2025
  • Venue: Cell Death & Disease
  • URL: https://www.semanticscholar.org/paper/c874bbb3c9e6aa0a3f74519c022f3fa822daf4a8
  • DOI: 10.1038/s41419-025-08103-z
  • PMID: 41145409
  • PMCID: 12559425
  • Citations: 4
  • Influential citations: 1
  • Summary: TFEB and TFE3 are sequestered in muHTT aggregates, and muHTT proteins associates with LMP triggering the translocation of LGALS3 to the lumen of lysosomes, with a close relation between polyQ size and severity of these events.
  • Evidence snippets:
  • Snippet 1 (score: 0.732)
    > In HD, high levels of LGALS3 have been found in plasma and brain of patients and mice. LGALS3 upregulation was observed in HD mice before the motor symptoms, in the microglia LGALS3 was found associated to damaged lysosomes and its suppression in microglia ameliorated the HD mice phenotype [36].
    > LGALS3 is emerging as a key factor for NDs for its intracellular role in lysosomal damage, but also for its functions linked to its secretion in the extracellular space. Many pieces of evidence suggest its detrimental role in neurodegeneration, even if a protective role of LGALS3 has been reported (reviewed in ref. [75]). LGALS3 mechanisms of action need further investigation but its pharmacological modulation might represent a valuable target for intervention for NDs. LGALS3 inhibitors have already been tested in metabolic and fibrotic diseases, and these approaches might be applied to NDs. 3′-bis-(4aryltriazol-1-yl) thiodigalactoside (GB039, formerly named TD139), a synthetic small molecule that antagonizes LGALS3 activity by binding to the carbohydrate recognition domain, was effective in idiopathic pulmonary fibrosis and retinal degeneration [76,77]. Pectins, plant cell wall polysaccharides, mostly obtained from citrus and apples, represent natural LGALS3 inhibitors [78,79].
    > In summary, our experiments suggest that LQC impairment might contribute to HD. Indeed, the LGALS3 accumulation observed in HD cellular models due to TFEB and TFE3 sequestration by muHTT inclusions causes LMP and lysophagy impairment, in turn, influences LQC.
    > Fig. 8 TFEB and TFE3 sequestration affects the LQC. A, B NSC-34 cells were transfected with wt or muHTT.
  • Snippet 2 (score: 0.689)
    > A, B NSC-34 cells were transfected with wt or muHTT. (A) Representative images by confocal microscopy of double immunostaining with anti-LAMP1 (green) and anti-HTT antibody (red), nuclei were stained with DAPI (blue) (63X magnification). Scale bar: 10 μm. B the scatter dot blot represents the quantification of lysosome volume. The fields were randomly selected and at least 100 cells for each sample were analyzed (p < 0.001, one-way ANOVA with Tukey's test). C, D NSC-34 cells were cotransfected with wt or mutant HTT and EGFP-LGALS3. C Representative images by confocal microscopy of EGFP-LGALS3 (green) and IF staining with anti-HTT antibody (red), nuclei were stained with DAPI (blue) (63X magnification). Scale bar: 10 μm. D LGALS3 puncta assay. The bar graph represents the quantification of percentage of cells with >3 GFP-LGALS3 puncta. (* p < 0.005, p < 0.0001, one-way ANOVA with Tukey's test). NSC-34 cells were co-transfected with EGFP-LGALS3, FLAG-TFEB (E), FLAG-TFE3 (F), or EV, and wt or muHTT. LGALS3 puncta assay was performed. The graphs with individual values represent the quantification of percentage of cells with >3 GFP-LGALS3 puncta (p < 0.005, ****p < 0.0001, two-way ANOVA with Bonferroni's test).

[7] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.723)
    > In the LGALS family, LGALS3 has a special domain that recognizes and binds to β-galactosides on cellular glycoproteins and glycolipids (5).
    > LGALS3 may be observed in the cytoplasm and in the nucleus as well as the extracellular matrix (6). It serves different biological functions, such as cell growth, cell adhesion, angiogenesis, and apoptosis (7).
    > LGALS3 can be expressed in different types of tumors, and accumulating evidence has proved that LGALS3 plays a vital role in tumorigenesis and development (6,(8)(9)(10)(11)(12)(13)(14)(15)(16). Recently, a study indicated that LGALS3 can promote the therapeutic resistance of glioblastoma and is related to tumor risk and prognosis (17). However, its prognostic significance needs to be further confirmed in large glioma samples, and, hitherto, no studies have explored the role of LGALS3 in the glioma immune microenvironment and its correlation with key molecular markers, including isocitrate dehydrogenase 1 (IDH1), alpha-thalassemia/mental retardation X-linked (ATRX), O-6methylguanine-DNA methyltransferase (MGMT), telomerase reverse transcriptase (TERT), and 1p19q.
  • Snippet 2 (score: 0.702)
    > LGALS3 was Mainly Expressed in Pilocytic Astrocytoma, GBM, and IDH Wild-Type LGG
    > LGALS3 was mainly expressed in cytoplasm, and weak expression in endothelial cells was used as an internal control in glioma. The typical positive and negative results of IHC staining for LGALS3 in glioma are presented in Figures 1A-D. Distinctly high expression of LGALS3 was observed in pilocytic astrocytoma and GBM, both with a diffuse pattern (Figures 1E-H). In total, out of all 304 glioma cases, LGALS3 protein expression was positive in 125 glioma cases (41.1%, 125/304), with 69.2% (9/13) in WHO I (pilocytic astrocytoma), 9.8% (8/82) in WHO II (diffuse astrocytoma and oligodendroglioma), 34.2% (26/76) in WHO III (anaplastic astrocytoma and oligodendroglioma), and 61.7% (82/133) in WHO IV (glioblastoma) (Figure S2A). Further analysis showed that LGALS3 was mainly expressed in IDH wildtype LGG compared with IDH mutated LGG (Figure S2B). LGALS3-positive patients presented with significantly shorter OS than those of negative patients in all the gliomas, LGG, GBM, AA, and IDH glioma but no statistical difference in PA. PA, pilocytic astrocytoma; LGG, lower grade glioma; GBM, glioblastoma; AA, anaplastic astrocytoma.
    > = 0.002). Kaplan-Meier plots revealed that LGALS3 expression was a significantly unfavorable prognostic marker in diffusely infiltrating gliomas (WHO II-IV) but not in pilocytic glioma (WHO I).

[8] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.719)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

[9] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.717)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[10] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.705)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[11] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/26255eafb963932be62ecb55d4943930217cb63f
  • DOI: 10.1186/s12868-018-0428-x
  • PMID: 29716523
  • PMCID: 5930520
  • Citations: 7
  • Influential citations: 1
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.697)
    > atlases suggest that Lgals3 expression (at low-to-moderate levels) occurs in both pre-and post-natal brain, and has been localized to regions involved in motor behavior generation, including the cortex, striatum, cerebellum, and spinal cord. We thus argue that Lgals3 loss alters mouse motor function, either through its impact on motor development or through altered neuronal signaling in CNS regions that regulate or produce motor behavior. Further studies examining the consequences of Lgals3 loss at synaptic, neuronal, ensemble, and tissue levels of organization will be required to determine the precise mechanisms underlying this functional loss. Grey bands depict periods where mouse cohorts were tested in the home cage monitoring system. Note that neither axis begins at 0. Sampling interval for x-axis is 7 days except where noted by breakpoints
    > As mentioned earlier, Lgals3 has been implicated in a large number of physiological tasks at both a cellular and organwide level of organization. It is thus notable that mice with complete loss of Lgals3 function demonstrate relatively few behavioral differences when compared to wildtype C57BL/6J mice. This finding suggests that, at least in the mouse, there is some genetic redundancy regarding Lgals3 function. Studies of galectin evolution focusing on intron/exon organization as well as sequence identity suggest that duplication of ancestral galectin genes in animal lineages preceding the first teleost fish [62] provided the precursors for what has become a large vertebrate protein family [63]. There is also data suggesting that galectins may be able to substitute for one another in specific circumstances. For example, Lgals1 may compensate for Lgals3 loss at the spliceosome [64]. Extracellular Lgals1 also regulates T cell apoptosis in a manner similar to that of extracellular Lgals3 [65]. The behavioral phenotype arising from Lgals3 functional loss thus identifies neuronal loci and processes where there is no compensation for gene loss.

[12] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/613a09b176431cdca195e6b3c439b4edbe4f92af
  • DOI: 10.1186/s12868-018-0428-x
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.696)
    > atlases suggest that Lgals3 expression (at low-to-moderate levels) occurs in both pre-and post-natal brain, and has been localized to regions involved in motor behavior generation, including the cortex, striatum, cerebellum, and spinal cord. We thus argue that Lgals3 loss alters mouse motor function, either through its impact on motor development or through altered neuronal signaling in CNS regions that regulate or produce motor behavior. Further studies examining the consequences of Lgals3 loss at synaptic, neuronal, ensemble, and tissue levels of organization will be required to determine the precise mechanisms underlying this functional loss. Grey bands depict periods where mouse cohorts were tested in the home cage monitoring system. Note that neither axis begins at 0. Sampling interval for x-axis is 7 days except where noted by breakpoints
    > As mentioned earlier, Lgals3 has been implicated in a large number of physiological tasks at both a cellular and organwide level of organization. It is thus notable that mice with complete loss of Lgals3 function demonstrate relatively few behavioral differences when compared to wildtype C57BL/6J mice. This finding suggests that, at least in the mouse, there is some genetic redundancy regarding Lgals3 function. Studies of galectin evolution focusing on intron/exon organization as well as sequence identity suggest that duplication of ancestral galectin genes in animal lineages preceding the first teleost fish [62] provided the precursors for what has become a large vertebrate protein family [63]. There is also data suggesting that galectins may be able to substitute for one another in specific circumstances. For example, Lgals1 may compensate for Lgals3 loss at the spliceosome [64]. Extracellular Lgals1 also regulates T cell apoptosis in a manner similar to that of extracellular Lgals3 [65]. The behavioral phenotype arising from Lgals3 functional loss thus identifies neuronal loci and processes where there is no compensation for gene loss.

[13] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.696)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[14] Lysosomal damage is a therapeutic target in Duchenne muscular dystrophy

  • Authors: Abbass Jaber, Laura Palmieri, R. Bakour, N. Bourg, A. Hong et al.
  • Year: 2025
  • Venue: Science Advances
  • URL: https://www.semanticscholar.org/paper/3265a29ad8c2d48b294017fd50b6df9188b55ecb
  • DOI: 10.1126/sciadv.adv6805
  • PMID: 41124255
  • PMCID: 12542950
  • Citations: 7
  • Summary: Lysosomal perturbations in myofibers of patients with DMD and animal models are identified, highlighting lysosomal damage as an important pathomechanism in DMD and suggesting that combining trehalose with gene therapy could enhance therapeutic efficacy.
  • Evidence snippets:
  • Snippet 1 (score: 0.690)
    > To investigate whether cholesterol accumulation in dystrophic muscle is associated with the impaired lysosomal function, we sought a method to quantify lysosomal damage. Several studies have recently focused on lysosomal dysfunction, in which LMP plays a central role (18). However, very few studies have investigated lysosome damage in muscle. One identified marker of LMP is Gal-3 (or LGALS3), which is part of the galectins, a family of lectins that bind specifically to carbohydrates (19). These lectins are present in the cytosol, nucleus, and extracellular matrix and are translocated to the membrane of damaged lysosomes before their removal by the autophagy machinery (20). To analyze LGALS3 expression in a myogenic environment and its capacity to detect LMP, we differentiated healthy human immortalized myoblasts into elongated myotubes for 7 days and then performed immunostaining for LGALS3 and lysosome-associated membrane protein 2 (LAMP2), which is commonly used as a lysosome marker (21). A diffuse expression of LGALS3 was observed in the cells (fig. S1A). Treatment with l-leucyl-l-leucine methyl ester (LLOMe), a lysomotropic agent that induces lysosome-specific membrane damage (22), for 30 min at 2.5 mM triggered the formation of LGALS3-positive puncta, which colocalized with LAMP2, indicating typical damaged lysosomes. An up-regulation of LGALS3 was also detected by Western blotting after 30 min to 1 hour of LLOMe treatment (fig. S1, B and C). LGALS3 puncta were markedly reduced 3 hours after treatment, and LGALS3 expression was restored to the control level, demonstrating efficient lysosomal repair by the cells. This pattern correlated inversely with the amount of LGALS3 released in the media, detected by an enzyme-linked immunosorbent assay (ELISA) assay (fig.

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0019863/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has IgE binding (GO:0019863). Gene/protein: LGALS3. Organism: H... Asta Asta Scientific Corpus Retrieval 14 citations 2026-06-22T04:46:38.340354 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has IgE binding (GO:0019863). Gene/protein: LGALS3. Organism: H...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 14
  • Snippets retrieved: 20

Relevant Papers

[1] Galectins: regulators of acute and chronic inflammation

  • Authors: Fu-Tong Liu, Gabriel A. Rabinovich
  • Year: 2010
  • Venue: Annals of the New York Academy of Sciences
  • URL: https://www.semanticscholar.org/paper/83c612d18547a49a6e5a5966b75f7c2f75db351c
  • DOI: 10.1111/j.1749-6632.2009.05131.x
  • PMID: 20146714
  • Citations: 411
  • Influential citations: 8
  • Summary: Current research indicates that galectins play important roles in the development of acute inflammation as well as chronic inflammation associated with allergies, autoimmune diseases, atherosclerosis, infectious processes, and cancer, and recombinant proteins or specific galectin inhibitors may be used as therapeutic agents for inflammatory diseases.
  • Evidence snippets:
  • Snippet 1 (score: 0.885)
    > optotic activity through binding to RAGE. 45 The function of endogenous galectin-3 in the mast cell response has been established by studying Lgals3 −/− mice. Lgals3 −/− mast cells exhibited lower degranulation and decreased cytokine production compared to wild-type cells when activated by cross-linkage of IgE receptor. The positive regulatory role of galectin-3 in mast cell response was supported by in vivo data: Lgals3 −/− mice exhibited diminished IgE-mediated passive cutaneous anaphylactic reactions. 48

[2] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.806)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.
  • Snippet 2 (score: 0.731)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.

[3] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.773)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.
  • Snippet 2 (score: 0.715)
    > In this study, we generated the Lgals3-R200S allele using CRISPR/Cas9 and a single-stranded DNA oligonucleotide as a template for homologous recombination. Mutation of the cognate arginine to serine in human Gal-3 (R186S) prevents Gal-3 secretion and glycan-binding [30,31,40]. Because mutation of the functionally equivalent arginine in galectin-7 also prevents glycan-binding [32,33], the R200S mutation in Gal-3 should be functionally equivalent. As confirmation, our surface biotinylation experiment demonstrated a dose-dependent reduction in surface Gal-3 in heterozygous and homozygous Lgals3-R200S mice. In our aged mouse bone studies, we observed a sexdependent increase in trabecular bone mass in female Lgals3-R200S mice. Yet only male Lgals3-R200S had significant increase in cortical bone expansion. The increased cortical bone expansion was coupled with reduced tissue quality (reduced max stress), and no change in tissue or whole bone stiffness values.
    > Similar to the findings presented here, we previously observed that female mice with genomic loss of Gal-3 (Lgals3-KO mice) had significant protection against age-related trabecular bone loss between 24 and 36 weeks of age [5]. But Lgals3-KO mice also had increased cortical bone expansion, whereas only male Lgals3-R200S did in this study. The effect size of the increases in cortical bone size was greater in Lgals3-KO females than males [5]. The similarities between Lgals3-R200S and Lgals3-KO mice (i.e., increased trabecular bone mass in female mice and increased cortical bone expansion in males) likely reflect the role of extracellular Gal-3 loss in increasing bone mass. Conversely, the differences between the two models (tissue stiffness and lack of female cortical bone expansion) could reflect the role of intracellular Gal-3.
    > The female dominance of the cortical bone expansion in
  • Snippet 3 (score: 0.706)
    > We previously observed that genomic loss of galectin-3 (Gal-3; encoded by Lgals3) in mice has a significant protective effect on age-related bone loss. Gal-3 has both intracellular and extracellular functionality, and we wanted to assess whether the affect we observed in the Lgals3 knockout (KO) mice could be attributed to the ability of Gal-3 to bind glycoproteins. Mutation of a highly conserved arginine to a serine in human Gal-3 (LGALS3-R186S) blocks glycan binding and secretion. We generated mice with the equivalent mutation (Lgals3-R200S) and observed a subsequent reduction in Gal-3 secretion from mouse embryonic fibroblasts and in circulating blood. When examining bone structure in aged mice, we noticed some similarities to the Lgals3-KO mice and some differences. First, we observed greater bone mass in Lgals3-R200S mutant mice, as was previously observed in Lgals3-KO mice. Like Lgals3-KO mice, significantly increased trabecular bone mass was only observed in female Lgals3-R200S mice. These results suggest that the greater bone mass observed is driven by the loss of extracellular Gal-3 functionality. However, the results from our cortical bone expansion data showed a sex-dependent difference, with only male Lgals3-KO mice having an increased response, contrasting with our earlier study. These notable sex differences suggest a potential role for sex hormones, most likely androgen signaling, being involved. In summary, our results suggest that targeting extracellular Gal-3 function may be a suitable treatment for age-related loss of bone mass.
    > Galectin-3 (Gal-3; encoded by Lgals3) is a protein that functions outside the cell to regulate glycoprotein secretion and turnover [1,2] and intracellularly in protein chaperoning and mRNA splicing [3,4]. We previously found that genomic deletion of Gal-3 in mice (Lgals3-KO) protects the mice against age-related [5] or sex-hormone deprivation bone loss [6]. A better understanding of the

[4] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.749)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).

[5] SMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis

  • Authors: Qin Xia, Hanfei Zheng, Yang Li, Wanting Xu, Chengwei Wu et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/7ab13fe72fa12a55aa9304ce52199d1494c8974a
  • DOI: 10.1080/15548627.2023.2267413
  • PMID: 37909662
  • PMCID: 11062382
  • Citations: 20
  • Summary: This study showed that SMURF1 affected lysosomal biogenesis in response to lysosomal damage by preventing TFEB nuclear translocation, and determined that LLOMe-mediated TFEB nuclear import is dependent on SMURF1 under the condition of MTORC1 inhibition.
  • Evidence snippets:
  • Snippet 1 (score: 0.743)
    > Consistently,
    > LGALS3 and PPP3R1 were required for binding of PPP3CB and TFEB evidenced by knocking down LGALS3 or PPP3R1 decreased, while overexpression of LGALS3 or PPP3R1 increased, the interaction of PPP3CB and TFEB (Figure 8K, L).Of note, we found that the enhanced PPP3CB and TFEB interaction mediated by SMURF1 overexpression was abolished by LGALS3 deletion (Figure 8M).Overall, these data strengthened our hypothesis that LGALS3 and SMURF1 contribute to PPP3CB from "close" to "open" form, which facilitates TFEB docking to the AID domain (Figure 8N).
  • Snippet 2 (score: 0.737)
    > Immunofluorescence assay showed that PPP3R1 was also recruited to lysosomes upon LLOMe treatment in a LGALS3-dependent manner (Figure S4A).To identify the role of PPP3R1 in the formation of complex, as expected, we first found that PPP3CB directly binds with PPP3R1 in a LLOMe-enhanced manner (Figure 6A, B).Considering that PPP3CB was directly associated with LGALS3, we also checked the interaction between PPP3R1 and LGALS3.The results showed that PPP3R1 indirectly binds with LGALS3 (Figure 6C).Similarly, LLOMe treatment also promoted the binding affinity between PPP3R1 and LGALS3 (Figure 6D).We next mapped the key interaction domain of LGALS3 with PPP3R1, and showed the NT domain of LGALS3 was essential for the association with PPP3R1 (Figure 6E, F).Furthermore, overexpression of PPP3CB increased, suppression of PPP3CB abolished, the interactions of PPP3R1 and LGALS3 (Figure 6G, H), suggesting PPP3CB is also the bridge for the interaction between LGALS3 and PPP3R1.Interestingly, we also detected that SMURF1 indirectly interacted with PPP3R1, but not MCOLN1, in a LLOMe-enhanced manner (Figure S4B-E).Given that both SMURF1 and PPP3R1 were indirectly bound with the NT domain of LGALS3, we asked whether SMURF1 affected the interactions between PPP3R1 and LGALS3.Our data indicated that suppression of SMURF1 decreased, overexpression of SMURF1 increased, the interactions of PPP3R1 and LGALS3 (Figure 6I, J), suggesting SMURF1 promotes the recruitment of PPP3R1 by LGALS3.We next mapped the key HECT domain of SMURF1 which was essential for interaction with PPP3R1 (Figure 6K, L).

[6] Clusterin Seals the Ocular Surface Barrier in Mouse Dry Eye

  • Authors: Aditi Bauskar, W. Mack, J. Mauris, P. Argüeso, M. Heur et al.
  • Year: 2015
  • Venue: PLoS ONE
  • URL: https://www.semanticscholar.org/paper/ddc53237e6b4b7c325cb047e4eaf34098273148e
  • DOI: 10.1371/journal.pone.0138958
  • PMID: 26402857
  • PMCID: 4581869
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that CLU prevents and ameliorates ocular surface barrier disruption by a remarkable sealing mechanism dependent on attainment of a critical all-or-none concentration, and suggests CLU as a biotherapeutic for dry eye.
  • Evidence snippets:
  • Snippet 1 (score: 0.740)
    > In other cases, CLU spots were clearly separate.
    > Next we considered what kinds of ocular surface molecules might bind CLU.
    > LGALS3, a key component of the ocular surface barrier, is a member of the galectin class of beta-galactosidebinding proteins. What is known about the glycosyl moiety of CLU is consistent with LGALS3 binding [25,27]. CLU applied to an LGALS3-sepharose affinity column bound to the beads and was not eluted 0.1 M sucrose, a disaccharide that does not compete with LGALS3 sugar binding, but was mostly eluted with a competitive inhibitor of LGALS3 sugar binding, 0.1 M beta-lactose (Fig 5C). This suggests that CLU binding to LGALS3 is specific for the beta-galactoside-binding function.

[7] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.734)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[8] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.731)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[9] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.726)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[10] Krüppel-like Factor 3 (KLF3/BKLF) Is Required for Widespread Repression of the Inflammatory Modulator Galectin-3 (Lgals3)*

  • Authors: Alexander J. Knights, Jinfen. J. Yik, Hanapi Mat Jusoh, Laura J. Norton, Alister P. W. Funnell et al.
  • Year: 2016
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/dce84b7faec66ad9234b04f596d036ed32078971
  • DOI: 10.1074/jbc.M116.715748
  • PMID: 27226561
  • Citations: 27
  • Influential citations: 1
  • Summary: It is shown that the zinc finger transcription factor Krüppel-like factor 3 (KLF3) directly represses galectin-3 transcription, and mechanistic insights into the regulation of Lgals3 are provided, demonstrating that C-terminal binding protein (CtBP) is required to drive optimal KLF3-mediated silencing.
  • Evidence snippets:
  • Snippet 1 (score: 0.725)
    > Despite the importance of galectin-3 in a host of biological settings, little is known about how its gene is activated (32)(33)(34), and to our knowledge, there is no published work on the repression of Lgals3. Here we have shown that galectin-3 expression is up-regulated in the absence of KLF3, and we have demonstrated that KLF3 directly binds and represses the Lgals3 promoter in vivo. Furthermore, we have provided mechanistic insights into KLF3 repression of Lgals3. In reporter assays, a KLF3 mutant that is unable to bind the co-repressor CtBP showed a reduced ability to repress Lgals3. Analysis of the expression levels of Lgals3 in Klf3 Ϫ/Ϫ MEFs rescued with KLF3 or a KLF3 mutant unable to bind to CtBP also showed that KLF3 recruitment of CtBP is necessary for optimal Lgals3 repression. These two lines of evidence suggest that recruitment of the co-repressor CtBP is important for KLF3 repression of Lgals3 but that CtBP-independent mechanisms also exist. We also assessed the contribution of the KLF3 functional domain to repression in Klf3 Ϫ/Ϫ MEF rescue experiments. KLF3 DNA-binding domain only showed only a modest ability to rescue Lgals3 repression when introduced into Klf3 Ϫ/Ϫ MEFs, suggesting that the functional domain (where CtBP binds) is important and also that direct competition for DNA binding to the Lgals3 promoter between KLF3 and the activating KLF1 is not likely to be a major feature of the mechanism of repression.
    > Galectin-3 has been identified as an important regulator of inflammation in metabolic tissues (27). Its deficiency in mice is associated with increased adiposity, systemic inflammation, and an accumulation of inflammatory cells in metabolic tissues (26,28). This phenotype poses a striking contrast to that seen in mice lacking KLF3, which display reduced fat mass and are protected from diet-induced obesity and glucose intolerance (23).

[11] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.724)
    > LGALS3 levels correlate with a variety of signaling molecules in blast cells from AML patients RPPA was used to examine correlations of LGALS3 with 230 other proteins. As shown in Fig. 3A, 68 of 231 proteins showed statistically significant (p b 0.0001, R N 0.25) correlation with LGALS3, with positive correlation for 27 total and 10 phospho-proteins and negative correlation for 24 total and 7 phospho-proteins. The strongest positive correlation was with the autophagy protein ATG7. The phospho-proteins positively correlated with LGALS3 included survival kinases such as p-ERK (pY202/pY204), p-AKT (pT308), three phospho-protein variants of PKC delta (i.e. pT507, pS645, and pS664), and p-PKC alpha (pS657) (Fig. 3). LGALS3 expression also positively correlated with phosphorylation of the tyrosine kinase SRC (i.e. pY416 and pY527). The most negatively correlated protein was Single Stranded DNA Binding Protein 2 (SSBP2) (Fig. 3). Among the other proteins negatively correlated with LGALS3 was the members of the PP2A B55 family (PPP2R2A, PPP2R2B, PPP2R2C, and PPP2R2D).
    > Protein network analysis was performed on the set of proteins associated with LGALS3 using String software (String 10.1; website: http:// string-db.org; ref. 38). The network of LGALS3 proteins identified by RPPA are highly associated with a protein:protein enrichment p value b1.0e−16 (Fig. 4) by String. Numerous biological pathways (N = 588) and KEGG pathways (N = 86) associated with LGALS3 network were identified using the String software. Data are presented in Supplemental Table 1 and Supplemental Table 2, respectively.
  • Snippet 2 (score: 0.717)
    > However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8). LGALS3 has been shown to be critical for CD44 endocytosis so LGALS3 would be expected to promote CD44 surface expression [54]. In AML cells with LGALS3 supported CD44 surface expression, CD74 would be predicted to augment signaling mediated by CD44.
    > LGALS3 is well known as an immune regulatory molecule that suppresses host anti-tumor immune surveillance by diverse mechanisms [1,2,55].
    > LGALS3 blocks or at least dampens immune cell function by reducing surface expression of glycosylated T cell receptor in T cells and preventing NK cell receptor binding to antigen [1,2]. LGALS3 has emerged as a critical component in MSC in AML patients to impact response to therapy [56]. It is likely that LGALS3 secreted from MSC and other support cells in the AML microenvironment negatively impacts immune surveillance in AML patients. It is yet to be determined if LGALS3 derived from the leukemia cells plays a role as an immune response inhibitor in AML.
    > LGALS9 is emerging as an important immune checkpoint inhibitor molecule as a TIM-3 binding partner [2,57]. LGALS9 also regulates T cell function as a CD44 binding partner [58]. Whereas LGALS3 binding to CD44 promotes metastasis, LGALS9 binding to CD44 suppresses this process [59,60]. Future RPPA studies to determine the role of LGALS9 and galectins other than LGALS3 are warranted.
    > For the first time, an at risk AML population has been found that is associated with active LGALS3 and active CD74 networks (Fig. 9A and B). At present, it is unclear which if any proteins within the LGALS3 or CD74 networks is driving this phenomenon. CD44, SPP1, and CLPP are highly induced in the patient cohort with both networks active compared to patients with normal-like state (Fig. 8).
  • Snippet 3 (score: 0.708)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[12] Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis

  • Authors: Runji Chen, D. McVey, D. Shen, Xiaoxin Huang, Shu Ye
  • Year: 2023
  • Venue: Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
  • URL: https://www.semanticscholar.org/paper/472c313e2214a97757712ab0a8b39b133bd6a6bc
  • DOI: 10.1161/JAHA.123.031121
  • PMID: 37815057
  • PMCID: 10757534
  • Citations: 133
  • Influential citations: 2
  • Summary: This review article discusses the 9 VSMC phenotypes that have been reported in atherosclerotic lesions and classifies them into differentiated VSMCs, intermediately dedifferentiated VSMCs, and dedifferentiated VSMCs.
  • Evidence snippets:
  • Snippet 1 (score: 0.711)
    > Lgals3 (also referred to as galectin-3) is considered a marker of macrophage-like cells. 13,31 Rong et al detected a population of VSMCs that expressed Lgals3 following cholesterol loading in vitro. 31 Recently, Alencar et al found that Lgals3 activation is not a specific marker of the differentiation of VSMCs to a macrophage-like state but rather it is a marker of VSMCs entering a transitional state, with increased expression of genes associated with stem cells that are capable of extracellular matrix remodeling. 16 Of note, similar to SEM-like cells, Lgals3 + cells also have increased expression of lymphocyte antigen 6 family member A and vascular cell adhesion molecule 1. Further studies to investigate if SEM-like cells are derived from Lgals3 + cells are warranted.
    > Using mouse, rat, and human models of cholesterolloading in VSMCs, Li et al found that SREBP1 (sterol regulatory-element binding protein-1) and Krüppel-like factor-15 induced up-and downregulation of Lgals3, respectively, via binding to the Lgals3 gene promoter (albeit at different sites). 45 Likewise, Lgals3 promoted SREBP1 gene expression, producing a feedforward loop upregulated by cholesterol loading. 45 Moreover, Lgals3 and SREBP1 downregulated myocardin-related transcription factor A expression in VSMCs. 45 In another study, Owsiany et al used a dual lineage tracing model and found that Lgals3 + VSMCs produce monocyte chemoattractant protein 1, a proinflammatory chemokine. 15 Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15

[13] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.706)
    > In the LGALS family, LGALS3 has a special domain that recognizes and binds to β-galactosides on cellular glycoproteins and glycolipids (5).
    > LGALS3 may be observed in the cytoplasm and in the nucleus as well as the extracellular matrix (6). It serves different biological functions, such as cell growth, cell adhesion, angiogenesis, and apoptosis (7).
    > LGALS3 can be expressed in different types of tumors, and accumulating evidence has proved that LGALS3 plays a vital role in tumorigenesis and development (6,(8)(9)(10)(11)(12)(13)(14)(15)(16). Recently, a study indicated that LGALS3 can promote the therapeutic resistance of glioblastoma and is related to tumor risk and prognosis (17). However, its prognostic significance needs to be further confirmed in large glioma samples, and, hitherto, no studies have explored the role of LGALS3 in the glioma immune microenvironment and its correlation with key molecular markers, including isocitrate dehydrogenase 1 (IDH1), alpha-thalassemia/mental retardation X-linked (ATRX), O-6methylguanine-DNA methyltransferase (MGMT), telomerase reverse transcriptase (TERT), and 1p19q.

[14] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.706)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

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Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has neutrophil chemotaxis (GO:0030593). Gene/protein: LGALS3. O... Asta Asta Scientific Corpus Retrieval 11 citations 2026-06-22T04:46:46.109519 citations file

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  • Papers retrieved: 11
  • Snippets retrieved: 20

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.929)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 2 (score: 0.910)
    > Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].According to Table S1, the expression of LGALS3 was statistically positively correlated with several chemokines of immune cells, involving monocytes/macrophages (CCL2, CCL3, CCL5, CCL7, CCL13, CCL17, and CCL22), T lymphocytes (CCL2, CCL1, CCL17, and CCL22), eosinophils (CCL11, CCL26, CCL5, CCL7, CCL13, and CCL3), mast cells (CCR1, CCR2, CCR3, CCR4, CCR5, CXCR2, and CXCR4), and neutrophils (CXCL8).Taken together, these outcomes indicate that LGALS3 is positively associated with immune cell infiltration and cell chemotaxis and could have a crucial function in HCC tumor immune microenvironment.
    > LGALS3 expression correlation and immune cell biomarkers in HCC Next, we wanted to investigate the LGALS3 function in HCC tumor immunity further.Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.
  • Snippet 3 (score: 0.809)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 4 (score: 0.787)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 5 (score: 0.777)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.
  • Snippet 6 (score: 0.750)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.
  • Snippet 7 (score: 0.707)
    > Next, the prognostic value of LGALS3 expression in the 23 kinds of cancer patients was then determined.Correlations between LGALS3 expression with OS (overall survival) were evaluated using the GEPIA2 database.In the OS study, only elevated LGALS3 expression indicated poorer survival for HCC patients (Fig. 2A).LGALS3 was not statistically significant for OS of 22 other cancer types patients.Furthermore, DSS (disease-specific survival) LGALS3 in predicting 1-, 3-, and 5-year OS. (H) ROC curve for LGALS3 in predicting 1-, 3-, and 5-year DSS.The higher values of AUC corresponding to higher predictive power.p value < 0.05; **p value < 0.001 was lesser in patients suffering from HCC having higher levels of LGALS3 expression (Fig. 2B).Next, we validated the expression levels of LGALS3 protein in HCC tissues using IF staining.As expected, HCC tumor demonstrated strong LGALS3 expression (Fig. 2C).These findings were further validated by qRT-PCR assay of tumor and adjacent normal tissues from 5 HCC patients.Here, LGALS3 expression was also significantly increased in the HCC tissues (Fig. 2D).In addition, LGALS3 expression was shown to be linked with the pathological stage of HCC, as illustrated in Fig. 2E.High expression of LGALS3 gene is associated with high tumor grade in HCC (Fig. 2F).Moreover, LGALS3 expression was significantly associated with OS and DSS in both univariate and multivariate analyses (Figure S2A-H).Time-dependent ROC analysis showed that the area under the ROC curve was 0.672 at 5 years of OS, and 0.691 at 5 years of DSS (Fig. 2G-H).Taken together, LGALS3 might function as a prospective biomarker for the prognosis of patients suffering from HCC.

[2] Combined High—Throughput Proteomics and Random Forest Machine-Learning Approach Differentiates and Classifies Metabolic, Immune, Signaling and ECM Intra-Tumor Heterogeneity of Colorectal Cancer

  • Authors: C. Contini, B. Manconi, A. Olianas, Giulia Guadalupi, Alessandra Schirru et al.
  • Year: 2024
  • Venue: Cells
  • URL: https://www.semanticscholar.org/paper/b7d8516d42c8108cbdf59e6865a8fb424c450946
  • DOI: 10.3390/cells13161311
  • PMID: 39195201
  • PMCID: 11352245
  • Citations: 6
  • Summary: Different metabolic strategies appeared to be adopted by the two CRC regions to uncouple the Krebs cycle and cytosolic glucose metabolism, promote lipogenesis, promote amino acid synthesis, down-regulate bioenergetics in mitochondria, and up-regulate oxidative stress.
  • Evidence snippets:
  • Snippet 1 (score: 0.832)
    > The regulatory activity on the cytoskeleton carried out by N-WASP is fundamental for the motility of leukocytes. CgA and Gal-3 are associated with GO annotations concerning the chemotaxis of immune cells, including GO:0002551 "mast cell chemotaxis", GO:0002548 "monocyte chemotaxis", and GO:0030593 "neutrophil chemotaxis".

[3] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.770)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[4] Macrophages secrete murinoglobulin-1 and galectin-3 to regulate neutrophil degranulation after myocardial infarction

  • Authors: Upendra Chalise, M. Daseke, William J. Kalusche, Shelby R. Konfrst, Jocelyn R. Rodriguez-Paar et al.
  • Year: 2022
  • Venue: Molecular Omics
  • URL: https://www.semanticscholar.org/paper/446873a6222f1a5c4299cb80c95f7f9ff792e9f8
  • DOI: 10.1039/d1mo00519g
  • PMID: 35230372
  • PMCID: 8963000
  • Citations: 18
  • Summary: In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals3 to accentuate neutrophil degranulation to regulate infarct wall thinning.
  • Evidence snippets:
  • Snippet 1 (score: 0.761)
    > while Lgals3 increased at MI day 7. The ratio of MUG1 to Lgals3 positively correlated with infarct wall thickness, revealing that MUG1 attenuated infarct wall thinning. In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals3 to accentuate neutrophil degranulation to regulate infarct wall thinning.
  • Snippet 2 (score: 0.750)
    > Inflammation presides early after myocardial infarction (MI) as a key event in cardiac wound healing. Ischemic cardiomyocytes secrete inflammatory cues to stimulate infiltration of leukocytes, predominantly macrophages and neutrophils. Infiltrating neutrophils degranulate to release a series of proteases including matrix metalloproteinase (MMP)-9 to break down extracellular matrix and remove necrotic myocytes to create space for the infarct scar to form. While neutrophil to macrophage communication has been explored, the reverse has been understudied. We used a proteomics approach to catalogue the macrophage secretome at MI day 1. Murinoglobulin-1 (MUG1) was the highest-ranked secreted protein (4.1-fold upregulated at MI day 1 vs. day 0 pre-MI cardiac macrophages, p = 0.004). By transcriptomics evaluation, galectin-3 (Lgals3) was 2.2-fold upregulated (p = 0.008) in MI day 1 macrophages. We explored the direct roles of MUG1 and Lgals3 on neutrophil degranulation. MUG1 blunted while Lgals3 amplified neutrophil degranulation in response to phorbol 12-myristate 13-acetate or interleukin-1β, as measured by MMP-9 secretion. Lgals3 itself also stimulated MMP-9 secretion. To determine if MUG1 regulated Lgals3, we co-stimulated neutrophils with MUG1 and Lgals3. MUG1 limited degranulation stimulated by Lgals3 by 64% (p < 0.001). In vivo, MUG1 was elevated in the infarct region at MI days 1 and 3, while Lgals3 increased at MI day 7. The ratio of MUG1 to Lgals3 positively correlated with infarct wall thickness, revealing that MUG1 attenuated infarct wall thinning. In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals

[5] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.728)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

[6] An Inflammation-Immunity Classifier of 11 Chemokines for Prediction of Overall Survival in Head and Neck Squamous Cell Carcinoma

  • Authors: Yushan Liang, Guofei Feng, S. Zhong, Xiaoyu Gao, Yan Tong et al.
  • Year: 2019
  • Venue: Medical Science Monitor : International Medical Journal of Experimental and Clinical Research
  • URL: https://www.semanticscholar.org/paper/ca1a2988b75211cc5296d7fc979460ada97a48d4
  • DOI: 10.12659/MSM.915248
  • PMID: 31203306
  • PMCID: 6592142
  • Citations: 5
  • Summary: This 11-chemokine signature could serve as a reliable prognostic tool for HNSC patients and might be useful to guide individualized treatment or even gene target therapy for high-risk patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.728)
    > Gene functional analysis indicated 29 GO terms and 4 KEGG pathways which these 11 chemokines were enriched in (Figure 4A, 4B). The main 9 participating GO terms contained chemokine-mediated (GO: 0070098), inflammatory response (GO: 0006954), cellular response to interleukin-1 (GO: 00071347), neutrophil chemotaxis (GO: 0030593), cellular response to tumor necrosis factor (GO: 0071356), lymphocyte chemotaxis (GO: 0048247), monocyte chemotaxis (GO: 0002548), chemokine activity (GO: 0008009), and CCR chemokine receptor (GO: 0048020). The key involved KEGG pathways were chemokine signaling pathway (Kegg: 04062), cytokinecytokine receptor (Kegg: 04060), NOD-like receptor signaling pathway (Kegg: 04621), and Malaria (Kegg: 05144).

[7] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.727)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.725)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Authors: Xiaofeng Li, Bing Yang
  • Year: 2025
  • Venue: Animal Bioscience
  • URL: https://www.semanticscholar.org/paper/b3da4d3a37ec0fae40140d0cf95db98d90b41079
  • DOI: 10.5713/ab.25.0108
  • PMID: 40506039
  • PMCID: 12580959
  • Citations: 1
  • Summary: A novel paradigm wherein histone phosphorylation coordinates intestinal morphogenesis is established, providing mechanistic insights for optimizing poultry intestinal health and nutritional strategies.
  • Evidence snippets:
  • Snippet 1 (score: 0.725)
    > Notably, as broilers age (from D0 to D7), the intestinal VH increases accordingly, indicating a positive balance between intestinal cell proliferation and apoptosis (i.e., cell proliferation predominates over apoptosis). Through transcriptional network analysis, we identified eight histone phosphorylation-associated hub genes (LGALS3, ITGB2, IRF7, SOCS3, CSF1R, KIF23, SMC2, and DLGAP5) that mechanistically link epigenetic regulation to developmental programming.
    > LGALS3 (galectin-3) plays critical roles in macrophage chemotaxis, mucosal barrier maintenance, intestinal epithelial cell (IEC) apoptosis regulation, and inflammatory responses [21][22][23]. Our study revealed a 6.59-fold increase in LGALS3 gene expression in the duodenum at D7 compared to D0 (Supplement 6), with functional analysis confirming its involvement in macrophage chemotaxis (Supplement 7). These findings align with Sun et al [21], who reported that LGALS3 silencing in necrotizing enterocolitis models inhibited the TLR4/NF-κB pathway, subsequently reducing IEC apoptosis and inflammation [21]. Emerging evidence further suggests LGALS3' s protective functions through ER stress modulation, autophagy regulation, and inflammasome control in intestinal Behçet' s disease [22], along with its capacity to upregulate key mucosal barrier components (MUC2, Occludin, and ZO-1) [23]. Collectively, these observations suggest LGALS3 promotes duodenal development through: 1) mucosal barrier reinforcement via tight junction protein upregulation, 2) inflammatory control through TLR4/NF-κB-mediated macrophage regulation, and 3) cellular homeostasis maintenance via ER stress/autophagy pathways.

[9] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.714)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 2 (score: 0.710)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.

[10] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.713)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[11] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.711)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

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Asta

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Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has extracellular matrix (GO:0031012). Gene/protein: LGALS3. Or... Asta Asta Scientific Corpus Retrieval 16 citations 2026-06-22T04:45:42.404046 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has extracellular matrix (GO:0031012). Gene/protein: LGALS3. Or...

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  • Papers retrieved: 16
  • Snippets retrieved: 20

Relevant Papers

[1] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.870)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.
  • Snippet 2 (score: 0.808)
    > We previously observed that genomic loss of galectin-3 (Gal-3; encoded by Lgals3) in mice has a significant protective effect on age-related bone loss. Gal-3 has both intracellular and extracellular functionality, and we wanted to assess whether the affect we observed in the Lgals3 knockout (KO) mice could be attributed to the ability of Gal-3 to bind glycoproteins. Mutation of a highly conserved arginine to a serine in human Gal-3 (LGALS3-R186S) blocks glycan binding and secretion. We generated mice with the equivalent mutation (Lgals3-R200S) and observed a subsequent reduction in Gal-3 secretion from mouse embryonic fibroblasts and in circulating blood. When examining bone structure in aged mice, we noticed some similarities to the Lgals3-KO mice and some differences. First, we observed greater bone mass in Lgals3-R200S mutant mice, as was previously observed in Lgals3-KO mice. Like Lgals3-KO mice, significantly increased trabecular bone mass was only observed in female Lgals3-R200S mice. These results suggest that the greater bone mass observed is driven by the loss of extracellular Gal-3 functionality. However, the results from our cortical bone expansion data showed a sex-dependent difference, with only male Lgals3-KO mice having an increased response, contrasting with our earlier study. These notable sex differences suggest a potential role for sex hormones, most likely androgen signaling, being involved. In summary, our results suggest that targeting extracellular Gal-3 function may be a suitable treatment for age-related loss of bone mass.
    > Galectin-3 (Gal-3; encoded by Lgals3) is a protein that functions outside the cell to regulate glycoprotein secretion and turnover [1,2] and intracellularly in protein chaperoning and mRNA splicing [3,4]. We previously found that genomic deletion of Gal-3 in mice (Lgals3-KO) protects the mice against age-related [5] or sex-hormone deprivation bone loss [6]. A better understanding of the
  • Snippet 3 (score: 0.804)
    > expansion in males) likely reflect the role of extracellular Gal-3 loss in increasing bone mass. Conversely, the differences between the two models (tissue stiffness and lack of female cortical bone expansion) could reflect the role of intracellular Gal-3.
    > The female dominance of the cortical bone expansion in Lgals3-KO mice was further supported using a separate Lgals3 null allele (Lgals3-Δ), where females once again had significantly increased trabecular and cortical bone mass at 36 weeks, but male Lgals3-Δ had slight reductions in both cortical and trabecular bone mass. The apparent sex-dependency of the bone phenotype was most likely due to diminished bone mass accrual in Lgals3-KO males before 12 week of age [5,41], which led us to speculate that Lgals3-KO mice might have reduced androgen-induced cortical bone expansion during puberty [42].
    > However, in Lgals3-R200S mice, we observed a male dominant phenotype in cortical bone expansion. Our gonadectomy study suggested that global loss of Gal-3 may lead to reduced bioavailability of androgens [6]. This would reduce the ability of androgen to support bone mass accrual during puberty [42]. Altered sexhormone regulation in the Lgals3-KO mother during fetal development might also explain why a different skeletal phenotype (increased age-related bone loss) has been reported when comparing Lgals3-KO mice to litters of background matched wildtype-mice [43]. Studies looking at systemic changes in hormones and growth factors in Lgals3-KO and Lgals3-R200S mice would help answer this question. In addition, conditional knockout of Lgals3 at later developmental stages, such as pre-and postpuberty or in aged mice, and studies of pre-and postpubescent Lgals3-R200S mouse cortical bone growth, will further clarify the timing of when extracellular Gal-3 affects bone mass expansion. Values are expressed as mean AE SEM (n = 7-14); Holm-Sidak post-

[2] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/613a09b176431cdca195e6b3c439b4edbe4f92af
  • DOI: 10.1186/s12868-018-0428-x
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.823)
    > Galectins are an evolutionarily ancient family of proteins sharing a high binding affinity for carbohydrates with β-galactoside linkages. In the extracellular space, galectins interact (through a conserved carbohydrate recognition domain, aka CRD) with glycosylated proteins to mediate both cell-to-cell interactions and cell-to-matrix adhesion. Galectins are thus pattern recognition molecules specialized to distinguish carbohydrate moieties.
    > Within the galectin family, galectin-3 (also known as Lgals3) has unique properties. Its preferred ligand is N-acetyllactosamine [1]. It is also the only galectin containing a conserved N-domain as well as a single CRD domain. This N-domain allows Lgals3 not bound to a carbohydrate target to form multimeric complexes [2].
    > In this manner, low extracellular Lgals3 concentrations tend to inhibit extracellular interactions and adhesion [3], while high Lgals3 extracellular concentrations facilitate cellular adhesion [4,5]. Lgals3 affinity for ECM substrates is also modulated by phosphorylation at its Ser6 residue [6].
    > Lgals3 is an NFκB target gene [7]; Lgals3 protein is widely distributed throughout most tissue sites (as demonstrated by the TiGER Tissue specific gene expression and regulation database; [8]). Furthermore, within specific tissues, Lgals3 protein expression is widespread, with extracellular [9], membrane bound, cytoplasmic, and nuclear localizations (for review, see [10]).

[3] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/26255eafb963932be62ecb55d4943930217cb63f
  • DOI: 10.1186/s12868-018-0428-x
  • PMID: 29716523
  • PMCID: 5930520
  • Citations: 7
  • Influential citations: 1
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.819)
    > Galectins are an evolutionarily ancient family of proteins sharing a high binding affinity for carbohydrates with β-galactoside linkages. In the extracellular space, galectins interact (through a conserved carbohydrate recognition domain, aka CRD) with glycosylated proteins to mediate both cell-to-cell interactions and cell-to-matrix adhesion. Galectins are thus pattern recognition molecules specialized to distinguish carbohydrate moieties.
    > Within the galectin family, galectin-3 (also known as Lgals3) has unique properties. Its preferred ligand is N-acetyllactosamine [1]. It is also the only galectin containing a conserved N-domain as well as a single CRD domain. This N-domain allows Lgals3 not bound to a carbohydrate target to form multimeric complexes [2].
    > In this manner, low extracellular Lgals3 concentrations tend to inhibit extracellular interactions and adhesion [3], while high Lgals3 extracellular concentrations facilitate cellular adhesion [4,5]. Lgals3 affinity for ECM substrates is also modulated by phosphorylation at its Ser6 residue [6].
    > Lgals3 is an NFκB target gene [7]; Lgals3 protein is widely distributed throughout most tissue sites (as demonstrated by the TiGER Tissue specific gene expression and regulation database; [8]). Furthermore, within specific tissues, Lgals3 protein expression is widespread, with extracellular [9], membrane bound, cytoplasmic, and nuclear localizations (for review, see [10]).

[4] Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis

  • Authors: Runji Chen, D. McVey, D. Shen, Xiaoxin Huang, Shu Ye
  • Year: 2023
  • Venue: Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
  • URL: https://www.semanticscholar.org/paper/472c313e2214a97757712ab0a8b39b133bd6a6bc
  • DOI: 10.1161/JAHA.123.031121
  • PMID: 37815057
  • PMCID: 10757534
  • Citations: 133
  • Influential citations: 2
  • Summary: This review article discusses the 9 VSMC phenotypes that have been reported in atherosclerotic lesions and classifies them into differentiated VSMCs, intermediately dedifferentiated VSMCs, and dedifferentiated VSMCs.
  • Evidence snippets:
  • Snippet 1 (score: 0.813)
    > Lgals3 (also referred to as galectin-3) is considered a marker of macrophage-like cells. 13,31 Rong et al detected a population of VSMCs that expressed Lgals3 following cholesterol loading in vitro. 31 Recently, Alencar et al found that Lgals3 activation is not a specific marker of the differentiation of VSMCs to a macrophage-like state but rather it is a marker of VSMCs entering a transitional state, with increased expression of genes associated with stem cells that are capable of extracellular matrix remodeling. 16 Of note, similar to SEM-like cells, Lgals3 + cells also have increased expression of lymphocyte antigen 6 family member A and vascular cell adhesion molecule 1. Further studies to investigate if SEM-like cells are derived from Lgals3 + cells are warranted.
    > Using mouse, rat, and human models of cholesterolloading in VSMCs, Li et al found that SREBP1 (sterol regulatory-element binding protein-1) and Krüppel-like factor-15 induced up-and downregulation of Lgals3, respectively, via binding to the Lgals3 gene promoter (albeit at different sites). 45 Likewise, Lgals3 promoted SREBP1 gene expression, producing a feedforward loop upregulated by cholesterol loading. 45 Moreover, Lgals3 and SREBP1 downregulated myocardin-related transcription factor A expression in VSMCs. 45 In another study, Owsiany et al used a dual lineage tracing model and found that Lgals3 + VSMCs produce monocyte chemoattractant protein 1, a proinflammatory chemokine. 15 Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15

[5] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.805)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[6] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.799)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).
  • Authors: Haoren Qin, Heng Zhang, Haipeng Li, Qiong Xu, Wan-jun Sun et al.
  • Year: 2023
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/49a148168d686123fb072be1d332606425d67aa7
  • DOI: 10.3389/fonc.2022.1100481
  • PMID: 36741692
  • PMCID: 9890073
  • Citations: 11
  • Summary: The risk score model built with five radioresistance genes in this study, including TNFRSF13C, CD36, ANGPTL4, LAMB3, and SERPINA1, showed favorable performance in prognosis prediction after radiotherapy for CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.799)
    > Therefore, the cell adhesion and ECM-related DEGs were screened as candidate genes for subsequent analyses.
    > We cross-referenced the cell adhesion and extracellular matrixrelated genes with the above-mentioned DEGs by releasing all genes containing the following annotations or their subdivisions: GO:0031012 extracellular matrix; GO:0030198 GO:0031012 extracellular matrix; GO:0030198 extracellular matrix organization; GO:1903053 regulation of extracellular matrix organization; GO:0035426 extracellular matrix-cell signaling; GO:0007155 cell adhesion; GO:0030155 regulation of cell adhesion; GO:0007160 cell-matrix adhesion; and GO:0050840 extracellular matrix binding. A total of 94 overlapping genes from DEGs and ECM-related genes were retained as candidate genes for subsequent analysis (Figure 1G). For these 94 genes, the interaction network of the encoded proteins was mapped using the STRING database (Figure 1H).

[8] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.794)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.
  • Snippet 2 (score: 0.764)
    > Next, the prognostic value of LGALS3 expression in the 23 kinds of cancer patients was then determined.Correlations between LGALS3 expression with OS (overall survival) were evaluated using the GEPIA2 database.In the OS study, only elevated LGALS3 expression indicated poorer survival for HCC patients (Fig. 2A).LGALS3 was not statistically significant for OS of 22 other cancer types patients.Furthermore, DSS (disease-specific survival) LGALS3 in predicting 1-, 3-, and 5-year OS. (H) ROC curve for LGALS3 in predicting 1-, 3-, and 5-year DSS.The higher values of AUC corresponding to higher predictive power.p value < 0.05; **p value < 0.001 was lesser in patients suffering from HCC having higher levels of LGALS3 expression (Fig. 2B).Next, we validated the expression levels of LGALS3 protein in HCC tissues using IF staining.As expected, HCC tumor demonstrated strong LGALS3 expression (Fig. 2C).These findings were further validated by qRT-PCR assay of tumor and adjacent normal tissues from 5 HCC patients.Here, LGALS3 expression was also significantly increased in the HCC tissues (Fig. 2D).In addition, LGALS3 expression was shown to be linked with the pathological stage of HCC, as illustrated in Fig. 2E.High expression of LGALS3 gene is associated with high tumor grade in HCC (Fig. 2F).Moreover, LGALS3 expression was significantly associated with OS and DSS in both univariate and multivariate analyses (Figure S2A-H).Time-dependent ROC analysis showed that the area under the ROC curve was 0.672 at 5 years of OS, and 0.691 at 5 years of DSS (Fig. 2G-H).Taken together, LGALS3 might function as a prospective biomarker for the prognosis of patients suffering from HCC.

[9] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.793)
    > In the LGALS family, LGALS3 has a special domain that recognizes and binds to β-galactosides on cellular glycoproteins and glycolipids (5).
    > LGALS3 may be observed in the cytoplasm and in the nucleus as well as the extracellular matrix (6). It serves different biological functions, such as cell growth, cell adhesion, angiogenesis, and apoptosis (7).
    > LGALS3 can be expressed in different types of tumors, and accumulating evidence has proved that LGALS3 plays a vital role in tumorigenesis and development (6,(8)(9)(10)(11)(12)(13)(14)(15)(16). Recently, a study indicated that LGALS3 can promote the therapeutic resistance of glioblastoma and is related to tumor risk and prognosis (17). However, its prognostic significance needs to be further confirmed in large glioma samples, and, hitherto, no studies have explored the role of LGALS3 in the glioma immune microenvironment and its correlation with key molecular markers, including isocitrate dehydrogenase 1 (IDH1), alpha-thalassemia/mental retardation X-linked (ATRX), O-6methylguanine-DNA methyltransferase (MGMT), telomerase reverse transcriptase (TERT), and 1p19q.

[10] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.774)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

[11] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.771)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.

[12] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.768)
    > However, opposite DNA methylation patterns (associated with a higher mutation rate in aggressive ECs) were found between type I and type II ECs, thus confirming the more aggressive phenotype of ECC-1 cells induced upon C1GALT1 depletion [82]. These data suggest that NCOA1 and DNMT3A levels might be used as biomarkers of EC malignancy. In contrast, dysregulation of ERCC3 (Excision repair cross-complementation group 3) levels has not been previously associated to EC, although different studies highlight the suppressor role of ERCC3 silencing in different cancers, as pancreatic or liver carcinomas [83,84].
    > Finally, LGALS3 (Galectin-3) is a protein that interacts with glycoproteins from the extracellular matrix in a galactose-dependent manner, favoring cell interactions, or with cytosolic or nuclear targets in a glycosylation independent manner [46]. Importantly, LGALS3 has been reported as EC marker [85][86][87], and as unfavorable marker for overall survival [73]. Here, we have found that the LGALS3 upregulation occurred in parallel to the downregulation of C1GALT1 both in vitro and in vivo in tumor tissue, with a significant negative correlation between them. Therefore, it can be suggested that LGALS3 upregulation in aggressive EC was a consequence of the downregulation of O-glycosylation in proteins from the extracellular matrix, which avoids LGALS3 interaction in the extracellular matrix of EC tumors, and as a compensatory effect an increase and release of LGALS3 should be produced.
    > In conclusion, quantitative proteomics of a well-characterized cellular model, where upon C1GALT1 depletion a more aggressive phenotype was induced, allow for the identification of proteins dysregulated in aggressive ECs and related pathways that might be of interest for a better understanding of the mechanisms undergoing EC pathogenesis related to O-glycosylation.

[13] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.768)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[14] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.768)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 2 (score: 0.766)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[15] Lgals3 Promotes Calcium Oxalate Crystal Formation and Kidney Injury Through Histone Lactylation‐Mediated FGFR4 Activation

  • Authors: Zehua Ye, Yushi Sun, Songyuan Yang, Lei Li, Bojun Li et al.
  • Year: 2025
  • Venue: Advanced Science
  • URL: https://www.semanticscholar.org/paper/adbfa30b5832407d200a5eade9196d41be08050e
  • DOI: 10.1002/advs.202413937
  • PMID: 39903812
  • PMCID: 11947994
  • Citations: 18
  • Summary: Findings suggest that Lgals3 may play a key role in CaOx stone formation and kidney injury by interacting with PKM2 and promoting both H3K18la‐mediated gene transcription and activation.
  • Evidence snippets:
  • Snippet 1 (score: 0.766)
    > To investigate whether Lgals3 promoted kidney injury and renal fibrosis caused by CaOx crystal, a kidney-specific overexpression system that overexpressed Lgals3 was utilized in mice (Figure S5A, Supporting Information). After four weeks of injection, the effectiveness of Lgals3 overexpression was confirmed by qPCR and Western blot (Figure S5B,C, Supporting Information). Subsequently, a CaOx kidney stone model was established (Figure 3A). The serum BUN and Creatinine results showed that Lgals3 overexpression migrates the kidney injury (Figure 3B,C). HE and Von Kossa staining found that Lgals3 overexpression aggravated kidney injury and CaOx crystal deposition (Figure 3D). In addition, pathology staining and Western blot analysis found that overexpression of Lgals3 significantly increased renal fibrosis and inflammation response caused by CaOx crystal deposition (Figure 3E,F; Figure S5D, Supporting Information).
    > An adenoviral vector encoding the Lgals3 gene was utilized in vitro to investigate the effects of Lgals3 overexpression. The overexpression efficiency was confirmed by Western blot (Figure S4B, Supporting Information). Western blot analysis and immunofluorescence staining of ROS found that overexpression of Lgals3 significantly increased the expression of fibrosis-related protein and ROS expression (Figure S4F,G, Supporting Information). Taken together, these results indicate that Lgals3 overexpression can promote CaOx crystal deposition and renal fibrosis.

[16] Krüppel-like Factor 3 (KLF3/BKLF) Is Required for Widespread Repression of the Inflammatory Modulator Galectin-3 (Lgals3)*

  • Authors: Alexander J. Knights, Jinfen. J. Yik, Hanapi Mat Jusoh, Laura J. Norton, Alister P. W. Funnell et al.
  • Year: 2016
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/dce84b7faec66ad9234b04f596d036ed32078971
  • DOI: 10.1074/jbc.M116.715748
  • PMID: 27226561
  • Citations: 27
  • Influential citations: 1
  • Summary: It is shown that the zinc finger transcription factor Krüppel-like factor 3 (KLF3) directly represses galectin-3 transcription, and mechanistic insights into the regulation of Lgals3 are provided, demonstrating that C-terminal binding protein (CtBP) is required to drive optimal KLF3-mediated silencing.
  • Evidence snippets:
  • Snippet 1 (score: 0.760)
    > Lgals3 Is Up-regulated in the Absence of KLF3-In studies of the role of KLF3 in hematopoiesis and red blood cell development, microarrays performed on Ter119 ϩ fetal liver cells lacking KLF3 revealed that the Lgals3 gene was consistently up-regulated in knockout animals (15). Because of the importance of galectin-3 in a number of biological settings, we undertook a fuller analysis of whether the expression of Lgals3 was altered in a range of mouse tissues in the absence of KLF3. Lgals3 mRNA levels were assessed in cultured murine embryonic fibroblasts (MEFs) as well as a series of primary tissues from wild-type and Klf3 Ϫ/Ϫ mice by quantitative real-time PCR. In primary and immortalized Klf3 Ϫ/Ϫ MEFs, Lgals3 mRNA was up-regulated 4.7-and 4.3-fold, respectively, compared with wild-type expression (Fig. 1A). Importantly, Lgals3 levels were also found to be elevated in a number of primary tissues dissected from KLF3-deficient mice (Fig. 1B). Derepression was most evident in Klf3 Ϫ/Ϫ subcutaneous (6.7-fold) and epididymal (3.3-fold) white adipose depots and in the heart (6.6-fold) and pancreas (4.2-fold).
    > Following the demonstration that Lgals3 is derepressed in Klf3 Ϫ/Ϫ tissues at the mRNA level, we next sought to determine whether this up-regulation was reflected at the protein level. Whole cell protein extracts were prepared from wild-type and Klf3 Ϫ/Ϫ fat depots and spleens, and the expression of galectin-3 protein was assessed by Western blotting (Fig. 1, C-F).

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0043236/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has laminin binding (GO:0043236). Gene/protein: LGALS3. Organis... Asta Asta Scientific Corpus Retrieval 13 citations 2026-06-22T04:46:53.636967 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has laminin binding (GO:0043236). Gene/protein: LGALS3. Organis...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 13
  • Snippets retrieved: 20

Relevant Papers

[1] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.841)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 2 (score: 0.834)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.

[2] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.798)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

[3] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.792)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.
  • Snippet 2 (score: 0.770)
    > We previously observed that genomic loss of galectin-3 (Gal-3; encoded by Lgals3) in mice has a significant protective effect on age-related bone loss. Gal-3 has both intracellular and extracellular functionality, and we wanted to assess whether the affect we observed in the Lgals3 knockout (KO) mice could be attributed to the ability of Gal-3 to bind glycoproteins. Mutation of a highly conserved arginine to a serine in human Gal-3 (LGALS3-R186S) blocks glycan binding and secretion. We generated mice with the equivalent mutation (Lgals3-R200S) and observed a subsequent reduction in Gal-3 secretion from mouse embryonic fibroblasts and in circulating blood. When examining bone structure in aged mice, we noticed some similarities to the Lgals3-KO mice and some differences. First, we observed greater bone mass in Lgals3-R200S mutant mice, as was previously observed in Lgals3-KO mice. Like Lgals3-KO mice, significantly increased trabecular bone mass was only observed in female Lgals3-R200S mice. These results suggest that the greater bone mass observed is driven by the loss of extracellular Gal-3 functionality. However, the results from our cortical bone expansion data showed a sex-dependent difference, with only male Lgals3-KO mice having an increased response, contrasting with our earlier study. These notable sex differences suggest a potential role for sex hormones, most likely androgen signaling, being involved. In summary, our results suggest that targeting extracellular Gal-3 function may be a suitable treatment for age-related loss of bone mass.
    > Galectin-3 (Gal-3; encoded by Lgals3) is a protein that functions outside the cell to regulate glycoprotein secretion and turnover [1,2] and intracellularly in protein chaperoning and mRNA splicing [3,4]. We previously found that genomic deletion of Gal-3 in mice (Lgals3-KO) protects the mice against age-related [5] or sex-hormone deprivation bone loss [6]. A better understanding of the
  • Snippet 3 (score: 0.755)
    > s3 +/+ ), heterozygous (Lgals3-R200S KI/+ ), and homozygous (Lgals3-R200S KI/KI ) mutant mice (Fig. 1C). Consistent with a reduction in Gal-3 secretion, we observed significantly reduced Gal-3 protein levels in the plasma of adult heterozygous and homozygous mutant mice (Fig. 1D).
    > We generated mouse embryonic fibroblasts (MEFs) to look at cell-surface proteins, to confirm reduction of extracellular Gal-3 protein in Lgals3-R200S cells. Cell surface proteins were biotinylated and captured with NeutrAvidin Agarose. Western blot analysis showed cell surface Gal-3 levels were decreased in Lgals3-R200S KI/+ and Lgals3-R200S KI/KI cells compared to wild-type (Fig. 1E). The absence of the cytoplasmic protein, vinculin, from the pull-down lanes confirmed that the experiments worked to preferentially pull-down biotinylated cell surface proteins. Immunocytochemistry of MEFs from Lgals3-R200S KI/KI mice confirmed that Gal-3 is present in the cytosol and nucleus (Fig. 1F). Quantification of the mean and median amount of fluorescence per unit area indicated that Galectin-3 both on the cell surface and inside the cell was reduced, by approximately 30% and 26% respectively, in Lgals3-R200S KI/KI MEFs (P = 0.024). From these studies, we conclude that the R200S mutation in mice reduced cell surface Gal-3 and may have contributed to lower intracellular Gal-3 levels. Further studies will be necessary to determine if the 25-30% reduction in intracellular Gal-3 is biologically significant.

[4] Regulation and use of the extracellular matrix by Trypanosoma cruzi during early infection

  • Authors: P. Nde, M. Lima, Candice A. Johnson, S. Pratap, F. Villalta
  • Year: 2012
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/0f8537bce448a98bc55bef38dcc8d4b462ab72b5
  • DOI: 10.3389/fimmu.2012.00337
  • PMID: 23133440
  • PMCID: 3490126
  • Citations: 43
  • Influential citations: 2
  • Summary: The first elucidation of the human ECM interactome network regulated by T. cruzi is presented, a ligand that mediates the attachment of trypanosomes to cells to initiate infection, up-regulates LAMC1 expression to enhance cellular infection.
  • Evidence snippets:
  • Snippet 1 (score: 0.790)
    > The fact that LAMC1 is connected to LGALS3 through MYOC in the ECM interactome suggests the importance of LGALS3 in the manipulation of host ECM by T. cruzi.
    > Increased LGALS3 expression in the ECM promotes the adhesion of T. cruzi to host cells and subsequent infection (Kleshchenko et al., 2004). In addition, LGALS3 has numerous ECM interacting partners (Dumic et al., 2006), including collagen IV, hensin, laminins, fibronectin, vitronectin, tenascin, and elastin. LGALS3 regulates adhesion of these ECM proteins to a variety of host cells. Matrix metalloproteases, which are more active in T. cruzi infected mice, regulate LGAL3 function (Gutierrez et al., 2008). When metalloproteases are activated in the ECM, they can cleave LGALS3 and negatively regulate its function. Consequently, increased activation of MMP1 and MMP9 is associated with ECM destruction and myocarditis in T. cruzi infection.
    > Multiple types of collagen interact with the three central seed nodes, THBS1, LGALS3, and LAMC1. A glimpse of the importance of collagen in early T. cruzi infection was reported (Velge et al., 1988).

[5] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.787)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).

[6] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.780)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 2 (score: 0.777)
    > However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8). LGALS3 has been shown to be critical for CD44 endocytosis so LGALS3 would be expected to promote CD44 surface expression [54]. In AML cells with LGALS3 supported CD44 surface expression, CD74 would be predicted to augment signaling mediated by CD44.
    > LGALS3 is well known as an immune regulatory molecule that suppresses host anti-tumor immune surveillance by diverse mechanisms [1,2,55].
    > LGALS3 blocks or at least dampens immune cell function by reducing surface expression of glycosylated T cell receptor in T cells and preventing NK cell receptor binding to antigen [1,2]. LGALS3 has emerged as a critical component in MSC in AML patients to impact response to therapy [56]. It is likely that LGALS3 secreted from MSC and other support cells in the AML microenvironment negatively impacts immune surveillance in AML patients. It is yet to be determined if LGALS3 derived from the leukemia cells plays a role as an immune response inhibitor in AML.
    > LGALS9 is emerging as an important immune checkpoint inhibitor molecule as a TIM-3 binding partner [2,57]. LGALS9 also regulates T cell function as a CD44 binding partner [58]. Whereas LGALS3 binding to CD44 promotes metastasis, LGALS9 binding to CD44 suppresses this process [59,60]. Future RPPA studies to determine the role of LGALS9 and galectins other than LGALS3 are warranted.
    > For the first time, an at risk AML population has been found that is associated with active LGALS3 and active CD74 networks (Fig. 9A and B). At present, it is unclear which if any proteins within the LGALS3 or CD74 networks is driving this phenomenon. CD44, SPP1, and CLPP are highly induced in the patient cohort with both networks active compared to patients with normal-like state (Fig. 8).
  • Snippet 3 (score: 0.772)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 4 (score: 0.751)
    > LGALS3 levels correlate with a variety of signaling molecules in blast cells from AML patients RPPA was used to examine correlations of LGALS3 with 230 other proteins. As shown in Fig. 3A, 68 of 231 proteins showed statistically significant (p b 0.0001, R N 0.25) correlation with LGALS3, with positive correlation for 27 total and 10 phospho-proteins and negative correlation for 24 total and 7 phospho-proteins. The strongest positive correlation was with the autophagy protein ATG7. The phospho-proteins positively correlated with LGALS3 included survival kinases such as p-ERK (pY202/pY204), p-AKT (pT308), three phospho-protein variants of PKC delta (i.e. pT507, pS645, and pS664), and p-PKC alpha (pS657) (Fig. 3). LGALS3 expression also positively correlated with phosphorylation of the tyrosine kinase SRC (i.e. pY416 and pY527). The most negatively correlated protein was Single Stranded DNA Binding Protein 2 (SSBP2) (Fig. 3). Among the other proteins negatively correlated with LGALS3 was the members of the PP2A B55 family (PPP2R2A, PPP2R2B, PPP2R2C, and PPP2R2D).
    > Protein network analysis was performed on the set of proteins associated with LGALS3 using String software (String 10.1; website: http:// string-db.org; ref. 38). The network of LGALS3 proteins identified by RPPA are highly associated with a protein:protein enrichment p value b1.0e−16 (Fig. 4) by String. Numerous biological pathways (N = 588) and KEGG pathways (N = 86) associated with LGALS3 network were identified using the String software. Data are presented in Supplemental Table 1 and Supplemental Table 2, respectively.

[7] Clusterin Seals the Ocular Surface Barrier in Mouse Dry Eye

  • Authors: Aditi Bauskar, W. Mack, J. Mauris, P. Argüeso, M. Heur et al.
  • Year: 2015
  • Venue: PLoS ONE
  • URL: https://www.semanticscholar.org/paper/ddc53237e6b4b7c325cb047e4eaf34098273148e
  • DOI: 10.1371/journal.pone.0138958
  • PMID: 26402857
  • PMCID: 4581869
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that CLU prevents and ameliorates ocular surface barrier disruption by a remarkable sealing mechanism dependent on attainment of a critical all-or-none concentration, and suggests CLU as a biotherapeutic for dry eye.
  • Evidence snippets:
  • Snippet 1 (score: 0.779)
    > In other cases, CLU spots were clearly separate.
    > Next we considered what kinds of ocular surface molecules might bind CLU.
    > LGALS3, a key component of the ocular surface barrier, is a member of the galectin class of beta-galactosidebinding proteins. What is known about the glycosyl moiety of CLU is consistent with LGALS3 binding [25,27]. CLU applied to an LGALS3-sepharose affinity column bound to the beads and was not eluted 0.1 M sucrose, a disaccharide that does not compete with LGALS3 sugar binding, but was mostly eluted with a competitive inhibitor of LGALS3 sugar binding, 0.1 M beta-lactose (Fig 5C). This suggests that CLU binding to LGALS3 is specific for the beta-galactoside-binding function.

[8] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.771)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[9] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.770)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[10] SMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis

  • Authors: Qin Xia, Hanfei Zheng, Yang Li, Wanting Xu, Chengwei Wu et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/7ab13fe72fa12a55aa9304ce52199d1494c8974a
  • DOI: 10.1080/15548627.2023.2267413
  • PMID: 37909662
  • PMCID: 11062382
  • Citations: 20
  • Summary: This study showed that SMURF1 affected lysosomal biogenesis in response to lysosomal damage by preventing TFEB nuclear translocation, and determined that LLOMe-mediated TFEB nuclear import is dependent on SMURF1 under the condition of MTORC1 inhibition.
  • Evidence snippets:
  • Snippet 1 (score: 0.760)
    > Consistently,
    > LGALS3 and PPP3R1 were required for binding of PPP3CB and TFEB evidenced by knocking down LGALS3 or PPP3R1 decreased, while overexpression of LGALS3 or PPP3R1 increased, the interaction of PPP3CB and TFEB (Figure 8K, L).Of note, we found that the enhanced PPP3CB and TFEB interaction mediated by SMURF1 overexpression was abolished by LGALS3 deletion (Figure 8M).Overall, these data strengthened our hypothesis that LGALS3 and SMURF1 contribute to PPP3CB from "close" to "open" form, which facilitates TFEB docking to the AID domain (Figure 8N).
  • Snippet 2 (score: 0.758)
    > Immunofluorescence assay showed that PPP3R1 was also recruited to lysosomes upon LLOMe treatment in a LGALS3-dependent manner (Figure S4A).To identify the role of PPP3R1 in the formation of complex, as expected, we first found that PPP3CB directly binds with PPP3R1 in a LLOMe-enhanced manner (Figure 6A, B).Considering that PPP3CB was directly associated with LGALS3, we also checked the interaction between PPP3R1 and LGALS3.The results showed that PPP3R1 indirectly binds with LGALS3 (Figure 6C).Similarly, LLOMe treatment also promoted the binding affinity between PPP3R1 and LGALS3 (Figure 6D).We next mapped the key interaction domain of LGALS3 with PPP3R1, and showed the NT domain of LGALS3 was essential for the association with PPP3R1 (Figure 6E, F).Furthermore, overexpression of PPP3CB increased, suppression of PPP3CB abolished, the interactions of PPP3R1 and LGALS3 (Figure 6G, H), suggesting PPP3CB is also the bridge for the interaction between LGALS3 and PPP3R1.Interestingly, we also detected that SMURF1 indirectly interacted with PPP3R1, but not MCOLN1, in a LLOMe-enhanced manner (Figure S4B-E).Given that both SMURF1 and PPP3R1 were indirectly bound with the NT domain of LGALS3, we asked whether SMURF1 affected the interactions between PPP3R1 and LGALS3.Our data indicated that suppression of SMURF1 decreased, overexpression of SMURF1 increased, the interactions of PPP3R1 and LGALS3 (Figure 6I, J), suggesting SMURF1 promotes the recruitment of PPP3R1 by LGALS3.We next mapped the key HECT domain of SMURF1 which was essential for interaction with PPP3R1 (Figure 6K, L).

[11] Krüppel-like Factor 3 (KLF3/BKLF) Is Required for Widespread Repression of the Inflammatory Modulator Galectin-3 (Lgals3)*

  • Authors: Alexander J. Knights, Jinfen. J. Yik, Hanapi Mat Jusoh, Laura J. Norton, Alister P. W. Funnell et al.
  • Year: 2016
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/dce84b7faec66ad9234b04f596d036ed32078971
  • DOI: 10.1074/jbc.M116.715748
  • PMID: 27226561
  • Citations: 27
  • Influential citations: 1
  • Summary: It is shown that the zinc finger transcription factor Krüppel-like factor 3 (KLF3) directly represses galectin-3 transcription, and mechanistic insights into the regulation of Lgals3 are provided, demonstrating that C-terminal binding protein (CtBP) is required to drive optimal KLF3-mediated silencing.
  • Evidence snippets:
  • Snippet 1 (score: 0.757)
    > Despite the importance of galectin-3 in a host of biological settings, little is known about how its gene is activated (32)(33)(34), and to our knowledge, there is no published work on the repression of Lgals3. Here we have shown that galectin-3 expression is up-regulated in the absence of KLF3, and we have demonstrated that KLF3 directly binds and represses the Lgals3 promoter in vivo. Furthermore, we have provided mechanistic insights into KLF3 repression of Lgals3. In reporter assays, a KLF3 mutant that is unable to bind the co-repressor CtBP showed a reduced ability to repress Lgals3. Analysis of the expression levels of Lgals3 in Klf3 Ϫ/Ϫ MEFs rescued with KLF3 or a KLF3 mutant unable to bind to CtBP also showed that KLF3 recruitment of CtBP is necessary for optimal Lgals3 repression. These two lines of evidence suggest that recruitment of the co-repressor CtBP is important for KLF3 repression of Lgals3 but that CtBP-independent mechanisms also exist. We also assessed the contribution of the KLF3 functional domain to repression in Klf3 Ϫ/Ϫ MEF rescue experiments. KLF3 DNA-binding domain only showed only a modest ability to rescue Lgals3 repression when introduced into Klf3 Ϫ/Ϫ MEFs, suggesting that the functional domain (where CtBP binds) is important and also that direct competition for DNA binding to the Lgals3 promoter between KLF3 and the activating KLF1 is not likely to be a major feature of the mechanism of repression.
    > Galectin-3 has been identified as an important regulator of inflammation in metabolic tissues (27). Its deficiency in mice is associated with increased adiposity, systemic inflammation, and an accumulation of inflammatory cells in metabolic tissues (26,28). This phenotype poses a striking contrast to that seen in mice lacking KLF3, which display reduced fat mass and are protected from diet-induced obesity and glucose intolerance (23).

[12] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.755)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[13] Lysosomal damage is a therapeutic target in Duchenne muscular dystrophy

  • Authors: Abbass Jaber, Laura Palmieri, R. Bakour, N. Bourg, A. Hong et al.
  • Year: 2025
  • Venue: Science Advances
  • URL: https://www.semanticscholar.org/paper/3265a29ad8c2d48b294017fd50b6df9188b55ecb
  • DOI: 10.1126/sciadv.adv6805
  • PMID: 41124255
  • PMCID: 12542950
  • Citations: 7
  • Summary: Lysosomal perturbations in myofibers of patients with DMD and animal models are identified, highlighting lysosomal damage as an important pathomechanism in DMD and suggesting that combining trehalose with gene therapy could enhance therapeutic efficacy.
  • Evidence snippets:
  • Snippet 1 (score: 0.753)
    > To investigate whether cholesterol accumulation in dystrophic muscle is associated with the impaired lysosomal function, we sought a method to quantify lysosomal damage. Several studies have recently focused on lysosomal dysfunction, in which LMP plays a central role (18). However, very few studies have investigated lysosome damage in muscle. One identified marker of LMP is Gal-3 (or LGALS3), which is part of the galectins, a family of lectins that bind specifically to carbohydrates (19). These lectins are present in the cytosol, nucleus, and extracellular matrix and are translocated to the membrane of damaged lysosomes before their removal by the autophagy machinery (20). To analyze LGALS3 expression in a myogenic environment and its capacity to detect LMP, we differentiated healthy human immortalized myoblasts into elongated myotubes for 7 days and then performed immunostaining for LGALS3 and lysosome-associated membrane protein 2 (LAMP2), which is commonly used as a lysosome marker (21). A diffuse expression of LGALS3 was observed in the cells (fig. S1A). Treatment with l-leucyl-l-leucine methyl ester (LLOMe), a lysomotropic agent that induces lysosome-specific membrane damage (22), for 30 min at 2.5 mM triggered the formation of LGALS3-positive puncta, which colocalized with LAMP2, indicating typical damaged lysosomes. An up-regulation of LGALS3 was also detected by Western blotting after 30 min to 1 hour of LLOMe treatment (fig. S1, B and C). LGALS3 puncta were markedly reduced 3 hours after treatment, and LGALS3 expression was restored to the control level, demonstrating efficient lysosomal repair by the cells. This pattern correlated inversely with the amount of LGALS3 released in the media, detected by an enzyme-linked immunosorbent assay (ELISA) assay (fig.

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0045806/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has negative regulation of endocytosis (GO:0045806). Gene/prote... Asta Asta Scientific Corpus Retrieval 11 citations 2026-06-22T04:47:01.096905 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has negative regulation of endocytosis (GO:0045806). Gene/prote...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 11
  • Snippets retrieved: 20

Relevant Papers

[1] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.768)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.757)
    > To determine if LGALS3 may be involved in regulation of the gene expression of the proteins most positively correlated with LGALS3 expression, we utilized THP-1 cells that expressed control lentiviral plasmid (LKO) and THP-1 cells that expressed LGALS3 shRNA. qRT-PCR analysis of cDNA generated from RNA from these cells revealed that there was 90% reduction of LGALS3 expression by the shRNA (Fig. 7). However, suppression of LGALS3 did not result in a major alteration of expression of ATG7, ITGAL, CCND3, PRKCA, PARP1, LGALS3 expression positively correlates with ATG7 and ITGAL and negatively correlates with SSBP2 and ERG in AML. CBioportal software was used to compare RNASeq measured gene expression of LGALS3 with ATG7, ITGAL, SSBP2, ERG, and other genes (listed in Table 3) in AML samples in the TCGA dataset from ref. [39].
  • Snippet 3 (score: 0.749)
    > LGALS3 were similarly correlated with gene expression, we utilized cBioPortal software (http://www.cbioportal.org/) to query the TCGA AML database that derived from the 2013 New England Journal of Medicine publication [39]. Of the top nine unmodified proteins that were positively correlated with LGALS3 protein expression, expression of genes for eight proteins (ATG7, ITGAL, MAP2K1, MAPK1, JMJD6, CCND3, VASP, and PRKCA) were significantly higher (q value b0.05) in AML cells with elevated LGALS3 expression in the TCGA database (Fig. 6; Table 3).Expression of LCK was not correlated with LGALS3 (q value = 0.282; Table 3). Of the top nine unmodified proteins that were negatively correlated with LGALS3 protein expression, expression of genes for seven proteins (SSBP2, ERG, KIT, PPP2R2A, PARP1, MYC, and TRIM24) were significantly lower (q value b0.05) in AML cells with elevated LGALS3 expression (Fig. 6; Table 3). Expression of SMAD1 trended lower in cells with elevated LGALS3 (q value = 0.0726; Table 3). Expression of NR4A1 was actually higher in cells with elevated LGALS3 (q value = 0.0399; Table 3). At present, it is not clear if LGALS3 regulates gene expression of any of these genes, whether any of the network proteins may serve as a regulator of LGALS3 gene expression, or whether there is a yet unidentified common regulator to the genes in the LGALS3 RPPA network. To determine if LGALS3 may be involved in regulation of the gene expression of the proteins most positively correlated with LGALS3 expression, we utilized THP-1 cells that expressed control lentiviral plasmid (LKO) and THP-1 cells that expressed LGALS3 shRNA.
  • Snippet 4 (score: 0.747)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 5 (score: 0.704)
    > To assess whether LGALS3 acts directly on the various LGALS3 correlated proteins identified by RPPA, we utilized THP-1 transductant cells that express control shRNA (LKO) or LGALS3 shRNA that we have previously described [15]. At least in THP-1 cells, in most cases LGALS3 did not regulate protein expression of many of the LGALS3 associated proteins including ATG7, ITGAL, SSBP2, or ERG (Fig. 5; data not shown). At present, it is not clear whether these proteins act to regulate LGALS3 expression or if LGALS3 shares common regulators with these proteins. However, one exception was the PP2A B subunit family PPP2R2A/B/C/D. Suppression of LGALS3 resulted in near 2× fold increase in expression of the PP2A B subunits (Fig. 5) which is consistent
    > LGALS3 expression is prognostic for poor survival outcome in some AML populations. Kaplan Meir curves for overall survival (A) and remission duration (B) in the total AML patients studied are presented. Kaplan Meir curvrves for overall survival among the AML patient population that achieved complete remission (C) and for survival after relapse (D) are also included. with the negative correlation found between the proteins by RPPA (Fig. 3).
  • Snippet 6 (score: 0.696)
    > LGALS3 positively regulates BCL2 and MCL-1 gene and protein expression in AML cells by supporting both ERK and AKT pathways [1,2,[12][13][14][15][16][17]. Suppression of LGALS3 by shRNA or with GCS-100 (an inhibitor of LGALS1 and LGALS3) blocks both AKT and ERK signaling pathways [15,17].
    > LGALS3 regulated pathways are involved in expression of genes and protein associated with cancer stem cells (CSC) and thus the galectin likely supports CSC [9]. Recent data suggests that LGALS3 supports malignant cell survival in AML [6,15,18]. In a cohort of Taiwanese AML patients, Cheng and colleagues reported that elevated LGALS3 mRNA was prognostic for poor survival outcome [18]. However, in that study the impact of LGALS3 protein expression or associations of the galectin with potential LGALS3 target proteins was not examined.
    > CD74 (also known as the invariant chain protein) is best known as a chaperone for major histocompatibility (MHC) Class II molecules involved in antigen presentation [19,20]. In addition to mediating MHC Class II molecule endocytosis, CD74 protects these molecules from proteolysis [19][20][21]. CD74 also has MHC Class II independent functions that involve the pro-inflammatory cytokine macrophage inhibitory factor (MIF) and cell surface signaling molecules CD44 and CXCR4 [19][20][21]. CD74 was found to bind MIF but CD74 alone is unable to initiate MIF signaling which requires either CD44 or CXCR4 [19][20][21][22][23]. CD74 dependent MIF signaling pathways include ERK, JNK, and AKT [24][25][26][27]. CD74 dependent MIF signaling has been shown to suppress p53 function and to activate NF kappa B [26,28].
  • Snippet 7 (score: 0.692)
    > The role of other galectins such as LGALS1 in AML biology is not clear.
    > LGALS1 may substitute for some LGALS3 functions particularly those involved in survival pathways as knock down of either LGALS1 or LGALS3 sensitized AML cells to BH3 mimetic drugs [15]. The failure of LGALS3 suppression to affect many of the RPPA identified proteins with the exception of PPP2R2A/B/C/D (Fig. 5) may reflect LGALS1 activity in these cells that may not be present in the primary AML cells. It is possible that many of the LGALS3 network proteins act to regulate LGALS3 rather than being regulated by the galectin. It is also possible that LGALS3 and some of the LGALS3 network proteins are subject to regulation by a yet unidentified common regulator(s). Further examination of the mechanism regulating the LGALS3 network is ongoing.
    > Network analysis from the data identifies a new extremely poor prognosis group based on the interaction between the LGALS3 and CD74 associated protein networks revealing potential biological pathways that may be critical in supporting AML cell survival. AML patients with both networks active are 8.5% of patients in the study (Fig. 9A) and thus this group may represent a sizeable population of AML patients. It is possible the two proteins regulate independent survival pathways that may have a synergistic effect on survival when both are active. The top ten biological processes associated with LGALS3 network include processes associated with cell metabolism (GO:0031325; GO:0032268; and GO:0032270), cell migration (GO:0030355), and response to growth factor stimulus (GO:0071363) and response to chemical stimulus (GO:0070887) (Supplemental Table 1). While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14].
  • Snippet 8 (score: 0.679)
    > However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8). LGALS3 has been shown to be critical for CD44 endocytosis so LGALS3 would be expected to promote CD44 surface expression [54]. In AML cells with LGALS3 supported CD44 surface expression, CD74 would be predicted to augment signaling mediated by CD44.
    > LGALS3 is well known as an immune regulatory molecule that suppresses host anti-tumor immune surveillance by diverse mechanisms [1,2,55].
    > LGALS3 blocks or at least dampens immune cell function by reducing surface expression of glycosylated T cell receptor in T cells and preventing NK cell receptor binding to antigen [1,2]. LGALS3 has emerged as a critical component in MSC in AML patients to impact response to therapy [56]. It is likely that LGALS3 secreted from MSC and other support cells in the AML microenvironment negatively impacts immune surveillance in AML patients. It is yet to be determined if LGALS3 derived from the leukemia cells plays a role as an immune response inhibitor in AML.
    > LGALS9 is emerging as an important immune checkpoint inhibitor molecule as a TIM-3 binding partner [2,57]. LGALS9 also regulates T cell function as a CD44 binding partner [58]. Whereas LGALS3 binding to CD44 promotes metastasis, LGALS9 binding to CD44 suppresses this process [59,60]. Future RPPA studies to determine the role of LGALS9 and galectins other than LGALS3 are warranted.
    > For the first time, an at risk AML population has been found that is associated with active LGALS3 and active CD74 networks (Fig. 9A and B). At present, it is unclear which if any proteins within the LGALS3 or CD74 networks is driving this phenomenon. CD44, SPP1, and CLPP are highly induced in the patient cohort with both networks active compared to patients with normal-like state (Fig. 8).
  • Snippet 9 (score: 0.662)
    > While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14]. Many of the CD74 network associated biological processes involved immune regulation (Supplemental Table 3) though it is unclear if CD74 network regulates potential immune response in AML. Many of the CD74 network associated biological processes did include those involved in regulation of cell death and apoptosis (Supplemental Table 3). Of the 31 proteins correlated with CD74 expression, 19 are associated with the biological pathway regulation of cell death (GO.0010941) and 16 are associated with the biological pathway negative regulation of apoptotic process (GO.0043066). The raises the question of what the cross-talk is between the LGALS3 and CD74 networks? Gene expression analysis of CD74, CD44, and CLPP in the THP-1 LKO cells versus THP-1 cells with LGALS3 shRNA showed no or only slight changes in these genes (Fig. 7). Protein expression of CD74, CD44, and CLPP were similar in THP-1 LKO and THP-1 LGALS3 shRNA cells (data not shown). While LGALS3 supports AKT activation via RAS, CD74 would be expected to support AKT via MIF mediated signaling involving CD44 and/or CXCR4 [19][20][21][22][23][24][25][26][27]. Though the functional roles of LGALS3 and CD74 in this process are very different, each network would contribute to activation and perhaps may explain why patients with both active networks do so poorly (Fig. 9A and B). Unfortunately, CXCR4 is not represented in the RPPA panel due to lack of validated antibody. However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8).

[2] Comparative Proteomic Profiling of Tumor-Associated Proteins in Human Gastric Cancer Cells Treated with Pectolinarigenin

  • Authors: Ho Jeong Lee, Venu Venkatarame Gowda Saralamma, S. Kim, S. Ha, P. Vetrivel et al.
  • Year: 2018
  • Venue: Nutrients
  • URL: https://www.semanticscholar.org/paper/630404664201d86cc15f629d5770143629ee1859
  • DOI: 10.3390/nu10111596
  • PMID: 30380781
  • PMCID: 6265996
  • Citations: 18
  • Summary: Pectolinarigenin, a natural flavonoid that is present in citrus fruits, has been reported to exhibit antitumor effects in several cancers, and proteomic analysis provides vital information about target proteins that are important for PEC-induced cell death in gastric cancer cells.
  • Evidence snippets:
  • Snippet 1 (score: 0.717)
    > In order to understand the biological relevance of PEC regulated proteins, as shown in Figure 10A,B and Table 3, the gene ontology (GO) terms for biological processes were investigated for all identified proteins. The GO results demonstrated that the highest associations were with the biological processes regulation of the epidermal growth factor receptor signaling pathway (GO: 0042058), related cell cycle (GO: 0007049), and negative regulation of endocytosis (GO: 0045806) in PEC-treated AGS cells. Apoptotic process (GO: 0006915), M phase of mitotic cell cycle (GO: 0000087), cell death (GO: 0008219), positive regulation of receptor-mediated endocytosis (GO: 0048260), and positive regulation of macrophage fusion (GO: 0034241) in PEC-treated MKN28 cells.
    > Figure 10. Gene ontology analysis of (A) AGS and (B) MKN28 cells. The pie charts representing the distribution of the identified proteins according to their biological process. Gene ontology analyses of the determined proteins were assigned according to their biological function, using the web-based tool at GeneCodis (http://genecodis.cnb.csic.es).

[3] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.717)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.
  • Snippet 2 (score: 0.676)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly

[4] Krüppel-like Factor 3 (KLF3/BKLF) Is Required for Widespread Repression of the Inflammatory Modulator Galectin-3 (Lgals3)*

  • Authors: Alexander J. Knights, Jinfen. J. Yik, Hanapi Mat Jusoh, Laura J. Norton, Alister P. W. Funnell et al.
  • Year: 2016
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/dce84b7faec66ad9234b04f596d036ed32078971
  • DOI: 10.1074/jbc.M116.715748
  • PMID: 27226561
  • Citations: 27
  • Influential citations: 1
  • Summary: It is shown that the zinc finger transcription factor Krüppel-like factor 3 (KLF3) directly represses galectin-3 transcription, and mechanistic insights into the regulation of Lgals3 are provided, demonstrating that C-terminal binding protein (CtBP) is required to drive optimal KLF3-mediated silencing.
  • Evidence snippets:
  • Snippet 1 (score: 0.717)
    > Lgals3 Is Up-regulated in the Absence of KLF3-In studies of the role of KLF3 in hematopoiesis and red blood cell development, microarrays performed on Ter119 ϩ fetal liver cells lacking KLF3 revealed that the Lgals3 gene was consistently up-regulated in knockout animals (15). Because of the importance of galectin-3 in a number of biological settings, we undertook a fuller analysis of whether the expression of Lgals3 was altered in a range of mouse tissues in the absence of KLF3. Lgals3 mRNA levels were assessed in cultured murine embryonic fibroblasts (MEFs) as well as a series of primary tissues from wild-type and Klf3 Ϫ/Ϫ mice by quantitative real-time PCR. In primary and immortalized Klf3 Ϫ/Ϫ MEFs, Lgals3 mRNA was up-regulated 4.7-and 4.3-fold, respectively, compared with wild-type expression (Fig. 1A). Importantly, Lgals3 levels were also found to be elevated in a number of primary tissues dissected from KLF3-deficient mice (Fig. 1B). Derepression was most evident in Klf3 Ϫ/Ϫ subcutaneous (6.7-fold) and epididymal (3.3-fold) white adipose depots and in the heart (6.6-fold) and pancreas (4.2-fold).
    > Following the demonstration that Lgals3 is derepressed in Klf3 Ϫ/Ϫ tissues at the mRNA level, we next sought to determine whether this up-regulation was reflected at the protein level. Whole cell protein extracts were prepared from wild-type and Klf3 Ϫ/Ϫ fat depots and spleens, and the expression of galectin-3 protein was assessed by Western blotting (Fig. 1, C-F).

[5] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.701)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[6] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.692)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.

[7] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.690)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

[8] LGALS3 (galectin 3) mediates an unconventional secretion of SNCA/α-synuclein in response to lysosomal membrane damage by the autophagic-lysosomal pathway in human midbrain dopamine neurons

  • Authors: Kevin J. Burbidge, D. J. Rademacher, Jessica E Mattick, Stephanie R. Zack, A. Grillini et al.
  • Year: 2021
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/cc5e102f7ebd04ebabcf3db8dfc995e5999c4629
  • DOI: 10.1080/15548627.2021.1967615
  • PMID: 34612142
  • PMCID: 9196737
  • Citations: 49
  • Summary: A human midbrain dopamine (mDA) neuronal culture model is used to provide evidence in support of a cellular mechanism that explains the cell-to-cell transfer of pathological forms of SNCA that are observed in PD and it is demonstrated that LGALS3 (galectin 3) mediates the release of S NCA following vesicular damage.
  • Evidence snippets:
  • Snippet 1 (score: 0.682)
    > Galectin recruitment to damaged vesicles leads to their recognition by autophagic adapter proteins and, subsequently, to their degradation via autophagy [25][26][27]. We and others have demonstrated that fibrillar forms of SNCA, MAPT/tau and other amyloids can induce vesicle damage following endocytosis, leading to the recruitment of LGALS3, LGALS8, autophagic adaptors, and effector proteins [6,[28][29][30]. When postmortem brain tissue from five PD patients was stained for LGALS3 and SNCA phosphorylated at serine 129 (p-S129) to identify LBs, a majority of the examined LBs displayed LGALS3 coronas [28]. The presence of LGALS3 in LBs suggests a history of membrane damage.
    > Accumulating evidence reveals that the biological functions of galectin proteins are central to the ALP impairment that occurs in PD and other neurodegenerative diseases [31][32][33][34][35]. The Deretic group demonstrated that the re-localization of LGALS3, LGALS8, and LGALS9 to damaged lysosomal compartments coordinates the cellular autophagic response [36][37][38][39][40]. Specifically, in combination with ULK1, TRIM16 (tripartite motif containing 16), and ATG16L1, LGALS3 facilitates the recruitment of autophagic adaptors, receptors, and effectors to damaged lysosomal membranes [38,40]. A recent genome-wide association study reported that single nucleotide polymorphisms in LGALS3 (gene transcript) are associated with an increased risk of PD [35]. Additionally, increased LGALS3 in the cerebrospinal fluid of PD patients has been reported [31,34,41].
    > Recent studies have also demonstrated that galectins and proteins normally associated with ALP degradation also act to promote an unconventional secretory mechanism referred to as secretory autophagy [39,42,43].

[9] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.673)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).

[10] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.671)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[11] Gene Prioritization for Imaging Genetics Studies Using Gene Ontology and a Stratified False Discovery Rate Approach

  • Authors: R. Baldock, A. Ferguson, W. M. Brown, Sejal Patel, M Mallar Chakravarty et al.
  • Year: 2016
  • Venue: Frontiers in Neuroinformatics
  • URL: https://www.semanticscholar.org/paper/9a53e7ac6c4f67e80679c6eb8016c4ccced3d7c9
  • DOI: 10.3389/fninf.2016.00014
  • PMID: 27092072
  • PMCID: 4823264
  • Citations: 8
  • Influential citations: 1
  • Summary: A novel method that utilizes Gene Ontology, an online database, to select and prioritize certain genes, employing a stratified false discovery rate (sFDR) approach to investigate their associations with imaging phenotypes is developed.
  • Evidence snippets:
  • Snippet 1 (score: 0.665)
    > Therefore the parent term that is regulated was selected, in this case the term "receptormediated endocytosis, " and the parent term that regulates a biological process but does not specify positive or negative regulation ("regulation of receptor-mediated endocytosis") is removed-shown in a yellow box -because the child term is more specific in terms of explaining how it is regulating the parent term (e.g., negative regulation of receptor-mediated endocytosis), Figure 3C.
    > Step 4: Quick GO was used to extract all the genes that are associated to the OGO terms (as displayed in Figure 4 in green boxes) in the pruned "transport system" network. SNPs from these genes were extracted from the ENIGMA2 and ADNI1 (Supplementary Section 2) dataset using a reference file containing the start and end positions of the transcribed gene portion according to the Homo sapiens build 37 protein and coding genes from National Center for Biotechnology Information (NCBI). This list of SNPs formed the priority list for sFDR.

Notes

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  • No synthesis or second-stage model call is performed.

Asta

(LGALS3-hypotheses/function-support-go-0048030/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has disaccharide binding (GO:0048030). Gene/protein: LGALS3. Or... Asta Asta Scientific Corpus Retrieval 15 citations 2026-06-22T04:45:50.124782 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has disaccharide binding (GO:0048030). Gene/protein: LGALS3. Or...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 15
  • Snippets retrieved: 20

Relevant Papers

[1] Clusterin Seals the Ocular Surface Barrier in Mouse Dry Eye

  • Authors: Aditi Bauskar, W. Mack, J. Mauris, P. Argüeso, M. Heur et al.
  • Year: 2015
  • Venue: PLoS ONE
  • URL: https://www.semanticscholar.org/paper/ddc53237e6b4b7c325cb047e4eaf34098273148e
  • DOI: 10.1371/journal.pone.0138958
  • PMID: 26402857
  • PMCID: 4581869
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that CLU prevents and ameliorates ocular surface barrier disruption by a remarkable sealing mechanism dependent on attainment of a critical all-or-none concentration, and suggests CLU as a biotherapeutic for dry eye.
  • Evidence snippets:
  • Snippet 1 (score: 0.933)
    > In other cases, CLU spots were clearly separate.
    > Next we considered what kinds of ocular surface molecules might bind CLU.
    > LGALS3, a key component of the ocular surface barrier, is a member of the galectin class of beta-galactosidebinding proteins. What is known about the glycosyl moiety of CLU is consistent with LGALS3 binding [25,27]. CLU applied to an LGALS3-sepharose affinity column bound to the beads and was not eluted 0.1 M sucrose, a disaccharide that does not compete with LGALS3 sugar binding, but was mostly eluted with a competitive inhibitor of LGALS3 sugar binding, 0.1 M beta-lactose (Fig 5C). This suggests that CLU binding to LGALS3 is specific for the beta-galactoside-binding function.

[2] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.812)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).

[3] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.809)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.
  • Snippet 2 (score: 0.753)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.

[4] Impairment of lysosomal quality control in Huntington disease

  • Authors: P. Rusmini, F. Mina, M. Valenza, Martina Vitali, V. Ferrari et al.
  • Year: 2025
  • Venue: Cell Death & Disease
  • URL: https://www.semanticscholar.org/paper/c874bbb3c9e6aa0a3f74519c022f3fa822daf4a8
  • DOI: 10.1038/s41419-025-08103-z
  • PMID: 41145409
  • PMCID: 12559425
  • Citations: 4
  • Influential citations: 1
  • Summary: TFEB and TFE3 are sequestered in muHTT aggregates, and muHTT proteins associates with LMP triggering the translocation of LGALS3 to the lumen of lysosomes, with a close relation between polyQ size and severity of these events.
  • Evidence snippets:
  • Snippet 1 (score: 0.791)
    > In HD, high levels of LGALS3 have been found in plasma and brain of patients and mice. LGALS3 upregulation was observed in HD mice before the motor symptoms, in the microglia LGALS3 was found associated to damaged lysosomes and its suppression in microglia ameliorated the HD mice phenotype [36].
    > LGALS3 is emerging as a key factor for NDs for its intracellular role in lysosomal damage, but also for its functions linked to its secretion in the extracellular space. Many pieces of evidence suggest its detrimental role in neurodegeneration, even if a protective role of LGALS3 has been reported (reviewed in ref. [75]). LGALS3 mechanisms of action need further investigation but its pharmacological modulation might represent a valuable target for intervention for NDs. LGALS3 inhibitors have already been tested in metabolic and fibrotic diseases, and these approaches might be applied to NDs. 3′-bis-(4aryltriazol-1-yl) thiodigalactoside (GB039, formerly named TD139), a synthetic small molecule that antagonizes LGALS3 activity by binding to the carbohydrate recognition domain, was effective in idiopathic pulmonary fibrosis and retinal degeneration [76,77]. Pectins, plant cell wall polysaccharides, mostly obtained from citrus and apples, represent natural LGALS3 inhibitors [78,79].
    > In summary, our experiments suggest that LQC impairment might contribute to HD. Indeed, the LGALS3 accumulation observed in HD cellular models due to TFEB and TFE3 sequestration by muHTT inclusions causes LMP and lysophagy impairment, in turn, influences LQC.
    > Fig. 8 TFEB and TFE3 sequestration affects the LQC. A, B NSC-34 cells were transfected with wt or muHTT.

[5] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.791)
    > We previously observed that genomic loss of galectin-3 (Gal-3; encoded by Lgals3) in mice has a significant protective effect on age-related bone loss. Gal-3 has both intracellular and extracellular functionality, and we wanted to assess whether the affect we observed in the Lgals3 knockout (KO) mice could be attributed to the ability of Gal-3 to bind glycoproteins. Mutation of a highly conserved arginine to a serine in human Gal-3 (LGALS3-R186S) blocks glycan binding and secretion. We generated mice with the equivalent mutation (Lgals3-R200S) and observed a subsequent reduction in Gal-3 secretion from mouse embryonic fibroblasts and in circulating blood. When examining bone structure in aged mice, we noticed some similarities to the Lgals3-KO mice and some differences. First, we observed greater bone mass in Lgals3-R200S mutant mice, as was previously observed in Lgals3-KO mice. Like Lgals3-KO mice, significantly increased trabecular bone mass was only observed in female Lgals3-R200S mice. These results suggest that the greater bone mass observed is driven by the loss of extracellular Gal-3 functionality. However, the results from our cortical bone expansion data showed a sex-dependent difference, with only male Lgals3-KO mice having an increased response, contrasting with our earlier study. These notable sex differences suggest a potential role for sex hormones, most likely androgen signaling, being involved. In summary, our results suggest that targeting extracellular Gal-3 function may be a suitable treatment for age-related loss of bone mass.
    > Galectin-3 (Gal-3; encoded by Lgals3) is a protein that functions outside the cell to regulate glycoprotein secretion and turnover [1,2] and intracellularly in protein chaperoning and mRNA splicing [3,4]. We previously found that genomic deletion of Gal-3 in mice (Lgals3-KO) protects the mice against age-related [5] or sex-hormone deprivation bone loss [6]. A better understanding of the
  • Snippet 2 (score: 0.785)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.
  • Snippet 3 (score: 0.750)
    > In this study, we generated the Lgals3-R200S allele using CRISPR/Cas9 and a single-stranded DNA oligonucleotide as a template for homologous recombination. Mutation of the cognate arginine to serine in human Gal-3 (R186S) prevents Gal-3 secretion and glycan-binding [30,31,40]. Because mutation of the functionally equivalent arginine in galectin-7 also prevents glycan-binding [32,33], the R200S mutation in Gal-3 should be functionally equivalent. As confirmation, our surface biotinylation experiment demonstrated a dose-dependent reduction in surface Gal-3 in heterozygous and homozygous Lgals3-R200S mice. In our aged mouse bone studies, we observed a sexdependent increase in trabecular bone mass in female Lgals3-R200S mice. Yet only male Lgals3-R200S had significant increase in cortical bone expansion. The increased cortical bone expansion was coupled with reduced tissue quality (reduced max stress), and no change in tissue or whole bone stiffness values.
    > Similar to the findings presented here, we previously observed that female mice with genomic loss of Gal-3 (Lgals3-KO mice) had significant protection against age-related trabecular bone loss between 24 and 36 weeks of age [5]. But Lgals3-KO mice also had increased cortical bone expansion, whereas only male Lgals3-R200S did in this study. The effect size of the increases in cortical bone size was greater in Lgals3-KO females than males [5]. The similarities between Lgals3-R200S and Lgals3-KO mice (i.e., increased trabecular bone mass in female mice and increased cortical bone expansion in males) likely reflect the role of extracellular Gal-3 loss in increasing bone mass. Conversely, the differences between the two models (tissue stiffness and lack of female cortical bone expansion) could reflect the role of intracellular Gal-3.
    > The female dominance of the cortical bone expansion in

[6] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.780)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[7] SMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis

  • Authors: Qin Xia, Hanfei Zheng, Yang Li, Wanting Xu, Chengwei Wu et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/7ab13fe72fa12a55aa9304ce52199d1494c8974a
  • DOI: 10.1080/15548627.2023.2267413
  • PMID: 37909662
  • PMCID: 11062382
  • Citations: 20
  • Summary: This study showed that SMURF1 affected lysosomal biogenesis in response to lysosomal damage by preventing TFEB nuclear translocation, and determined that LLOMe-mediated TFEB nuclear import is dependent on SMURF1 under the condition of MTORC1 inhibition.
  • Evidence snippets:
  • Snippet 1 (score: 0.758)
    > Immunofluorescence assay showed that PPP3R1 was also recruited to lysosomes upon LLOMe treatment in a LGALS3-dependent manner (Figure S4A).To identify the role of PPP3R1 in the formation of complex, as expected, we first found that PPP3CB directly binds with PPP3R1 in a LLOMe-enhanced manner (Figure 6A, B).Considering that PPP3CB was directly associated with LGALS3, we also checked the interaction between PPP3R1 and LGALS3.The results showed that PPP3R1 indirectly binds with LGALS3 (Figure 6C).Similarly, LLOMe treatment also promoted the binding affinity between PPP3R1 and LGALS3 (Figure 6D).We next mapped the key interaction domain of LGALS3 with PPP3R1, and showed the NT domain of LGALS3 was essential for the association with PPP3R1 (Figure 6E, F).Furthermore, overexpression of PPP3CB increased, suppression of PPP3CB abolished, the interactions of PPP3R1 and LGALS3 (Figure 6G, H), suggesting PPP3CB is also the bridge for the interaction between LGALS3 and PPP3R1.Interestingly, we also detected that SMURF1 indirectly interacted with PPP3R1, but not MCOLN1, in a LLOMe-enhanced manner (Figure S4B-E).Given that both SMURF1 and PPP3R1 were indirectly bound with the NT domain of LGALS3, we asked whether SMURF1 affected the interactions between PPP3R1 and LGALS3.Our data indicated that suppression of SMURF1 decreased, overexpression of SMURF1 increased, the interactions of PPP3R1 and LGALS3 (Figure 6I, J), suggesting SMURF1 promotes the recruitment of PPP3R1 by LGALS3.We next mapped the key HECT domain of SMURF1 which was essential for interaction with PPP3R1 (Figure 6K, L).
  • Snippet 2 (score: 0.748)
    > Consistently,
    > LGALS3 and PPP3R1 were required for binding of PPP3CB and TFEB evidenced by knocking down LGALS3 or PPP3R1 decreased, while overexpression of LGALS3 or PPP3R1 increased, the interaction of PPP3CB and TFEB (Figure 8K, L).Of note, we found that the enhanced PPP3CB and TFEB interaction mediated by SMURF1 overexpression was abolished by LGALS3 deletion (Figure 8M).Overall, these data strengthened our hypothesis that LGALS3 and SMURF1 contribute to PPP3CB from "close" to "open" form, which facilitates TFEB docking to the AID domain (Figure 8N).

[8] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.750)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[9] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.747)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.747)
    > However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8). LGALS3 has been shown to be critical for CD44 endocytosis so LGALS3 would be expected to promote CD44 surface expression [54]. In AML cells with LGALS3 supported CD44 surface expression, CD74 would be predicted to augment signaling mediated by CD44.
    > LGALS3 is well known as an immune regulatory molecule that suppresses host anti-tumor immune surveillance by diverse mechanisms [1,2,55].
    > LGALS3 blocks or at least dampens immune cell function by reducing surface expression of glycosylated T cell receptor in T cells and preventing NK cell receptor binding to antigen [1,2]. LGALS3 has emerged as a critical component in MSC in AML patients to impact response to therapy [56]. It is likely that LGALS3 secreted from MSC and other support cells in the AML microenvironment negatively impacts immune surveillance in AML patients. It is yet to be determined if LGALS3 derived from the leukemia cells plays a role as an immune response inhibitor in AML.
    > LGALS9 is emerging as an important immune checkpoint inhibitor molecule as a TIM-3 binding partner [2,57]. LGALS9 also regulates T cell function as a CD44 binding partner [58]. Whereas LGALS3 binding to CD44 promotes metastasis, LGALS9 binding to CD44 suppresses this process [59,60]. Future RPPA studies to determine the role of LGALS9 and galectins other than LGALS3 are warranted.
    > For the first time, an at risk AML population has been found that is associated with active LGALS3 and active CD74 networks (Fig. 9A and B). At present, it is unclear which if any proteins within the LGALS3 or CD74 networks is driving this phenomenon. CD44, SPP1, and CLPP are highly induced in the patient cohort with both networks active compared to patients with normal-like state (Fig. 8).

[10] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.747)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[11] Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis

  • Authors: Runji Chen, D. McVey, D. Shen, Xiaoxin Huang, Shu Ye
  • Year: 2023
  • Venue: Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
  • URL: https://www.semanticscholar.org/paper/472c313e2214a97757712ab0a8b39b133bd6a6bc
  • DOI: 10.1161/JAHA.123.031121
  • PMID: 37815057
  • PMCID: 10757534
  • Citations: 133
  • Influential citations: 2
  • Summary: This review article discusses the 9 VSMC phenotypes that have been reported in atherosclerotic lesions and classifies them into differentiated VSMCs, intermediately dedifferentiated VSMCs, and dedifferentiated VSMCs.
  • Evidence snippets:
  • Snippet 1 (score: 0.744)
    > Lgals3 (also referred to as galectin-3) is considered a marker of macrophage-like cells. 13,31 Rong et al detected a population of VSMCs that expressed Lgals3 following cholesterol loading in vitro. 31 Recently, Alencar et al found that Lgals3 activation is not a specific marker of the differentiation of VSMCs to a macrophage-like state but rather it is a marker of VSMCs entering a transitional state, with increased expression of genes associated with stem cells that are capable of extracellular matrix remodeling. 16 Of note, similar to SEM-like cells, Lgals3 + cells also have increased expression of lymphocyte antigen 6 family member A and vascular cell adhesion molecule 1. Further studies to investigate if SEM-like cells are derived from Lgals3 + cells are warranted.
    > Using mouse, rat, and human models of cholesterolloading in VSMCs, Li et al found that SREBP1 (sterol regulatory-element binding protein-1) and Krüppel-like factor-15 induced up-and downregulation of Lgals3, respectively, via binding to the Lgals3 gene promoter (albeit at different sites). 45 Likewise, Lgals3 promoted SREBP1 gene expression, producing a feedforward loop upregulated by cholesterol loading. 45 Moreover, Lgals3 and SREBP1 downregulated myocardin-related transcription factor A expression in VSMCs. 45 In another study, Owsiany et al used a dual lineage tracing model and found that Lgals3 + VSMCs produce monocyte chemoattractant protein 1, a proinflammatory chemokine. 15 Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15
  • Authors: Xiaofeng Li, Bing Yang
  • Year: 2025
  • Venue: Animal Bioscience
  • URL: https://www.semanticscholar.org/paper/b3da4d3a37ec0fae40140d0cf95db98d90b41079
  • DOI: 10.5713/ab.25.0108
  • PMID: 40506039
  • PMCID: 12580959
  • Citations: 1
  • Summary: A novel paradigm wherein histone phosphorylation coordinates intestinal morphogenesis is established, providing mechanistic insights for optimizing poultry intestinal health and nutritional strategies.
  • Evidence snippets:
  • Snippet 1 (score: 0.738)
    > LGALS3 Galectin 3
    > LGALS3 encodes a member of the galectin family of carbohydrate binding proteins which play an important role in numerous cellular functions including apoptosis, innate immunity, cell adhesion and T-cell regulation. The protein exhibits antimicrobial activity against bacteria and fungi.

[13] Lysosomal damage is a therapeutic target in Duchenne muscular dystrophy

  • Authors: Abbass Jaber, Laura Palmieri, R. Bakour, N. Bourg, A. Hong et al.
  • Year: 2025
  • Venue: Science Advances
  • URL: https://www.semanticscholar.org/paper/3265a29ad8c2d48b294017fd50b6df9188b55ecb
  • DOI: 10.1126/sciadv.adv6805
  • PMID: 41124255
  • PMCID: 12542950
  • Citations: 7
  • Summary: Lysosomal perturbations in myofibers of patients with DMD and animal models are identified, highlighting lysosomal damage as an important pathomechanism in DMD and suggesting that combining trehalose with gene therapy could enhance therapeutic efficacy.
  • Evidence snippets:
  • Snippet 1 (score: 0.738)
    > To investigate whether cholesterol accumulation in dystrophic muscle is associated with the impaired lysosomal function, we sought a method to quantify lysosomal damage. Several studies have recently focused on lysosomal dysfunction, in which LMP plays a central role (18). However, very few studies have investigated lysosome damage in muscle. One identified marker of LMP is Gal-3 (or LGALS3), which is part of the galectins, a family of lectins that bind specifically to carbohydrates (19). These lectins are present in the cytosol, nucleus, and extracellular matrix and are translocated to the membrane of damaged lysosomes before their removal by the autophagy machinery (20). To analyze LGALS3 expression in a myogenic environment and its capacity to detect LMP, we differentiated healthy human immortalized myoblasts into elongated myotubes for 7 days and then performed immunostaining for LGALS3 and lysosome-associated membrane protein 2 (LAMP2), which is commonly used as a lysosome marker (21). A diffuse expression of LGALS3 was observed in the cells (fig. S1A). Treatment with l-leucyl-l-leucine methyl ester (LLOMe), a lysomotropic agent that induces lysosome-specific membrane damage (22), for 30 min at 2.5 mM triggered the formation of LGALS3-positive puncta, which colocalized with LAMP2, indicating typical damaged lysosomes. An up-regulation of LGALS3 was also detected by Western blotting after 30 min to 1 hour of LLOMe treatment (fig. S1, B and C). LGALS3 puncta were markedly reduced 3 hours after treatment, and LGALS3 expression was restored to the control level, demonstrating efficient lysosomal repair by the cells. This pattern correlated inversely with the amount of LGALS3 released in the media, detected by an enzyme-linked immunosorbent assay (ELISA) assay (fig.

[14] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/613a09b176431cdca195e6b3c439b4edbe4f92af
  • DOI: 10.1186/s12868-018-0428-x
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.736)
    > Galectins are an evolutionarily ancient family of proteins sharing a high binding affinity for carbohydrates with β-galactoside linkages. In the extracellular space, galectins interact (through a conserved carbohydrate recognition domain, aka CRD) with glycosylated proteins to mediate both cell-to-cell interactions and cell-to-matrix adhesion. Galectins are thus pattern recognition molecules specialized to distinguish carbohydrate moieties.
    > Within the galectin family, galectin-3 (also known as Lgals3) has unique properties. Its preferred ligand is N-acetyllactosamine [1]. It is also the only galectin containing a conserved N-domain as well as a single CRD domain. This N-domain allows Lgals3 not bound to a carbohydrate target to form multimeric complexes [2].
    > In this manner, low extracellular Lgals3 concentrations tend to inhibit extracellular interactions and adhesion [3], while high Lgals3 extracellular concentrations facilitate cellular adhesion [4,5]. Lgals3 affinity for ECM substrates is also modulated by phosphorylation at its Ser6 residue [6].
    > Lgals3 is an NFκB target gene [7]; Lgals3 protein is widely distributed throughout most tissue sites (as demonstrated by the TiGER Tissue specific gene expression and regulation database; [8]). Furthermore, within specific tissues, Lgals3 protein expression is widespread, with extracellular [9], membrane bound, cytoplasmic, and nuclear localizations (for review, see [10]).

[15] Mice lacking galectin-3 (Lgals3) function have decreased home cage movement

  • Authors: Tammy R. Chaudoin, S. Bonasera
  • Year: 2018
  • Venue: BMC Neuroscience
  • URL: https://www.semanticscholar.org/paper/26255eafb963932be62ecb55d4943930217cb63f
  • DOI: 10.1186/s12868-018-0428-x
  • PMID: 29716523
  • PMCID: 5930520
  • Citations: 7
  • Influential citations: 1
  • Summary: P perturbation of behavioral circadian rhythms in Lgals3−/− mice is noted, with mice at both ages demonstrating greater variability in day-to-day performance of feeding, drinking, and movement compared to wildtype.
  • Evidence snippets:
  • Snippet 1 (score: 0.733)
    > Galectins are an evolutionarily ancient family of proteins sharing a high binding affinity for carbohydrates with β-galactoside linkages. In the extracellular space, galectins interact (through a conserved carbohydrate recognition domain, aka CRD) with glycosylated proteins to mediate both cell-to-cell interactions and cell-to-matrix adhesion. Galectins are thus pattern recognition molecules specialized to distinguish carbohydrate moieties.
    > Within the galectin family, galectin-3 (also known as Lgals3) has unique properties. Its preferred ligand is N-acetyllactosamine [1]. It is also the only galectin containing a conserved N-domain as well as a single CRD domain. This N-domain allows Lgals3 not bound to a carbohydrate target to form multimeric complexes [2].
    > In this manner, low extracellular Lgals3 concentrations tend to inhibit extracellular interactions and adhesion [3], while high Lgals3 extracellular concentrations facilitate cellular adhesion [4,5]. Lgals3 affinity for ECM substrates is also modulated by phosphorylation at its Ser6 residue [6].
    > Lgals3 is an NFκB target gene [7]; Lgals3 protein is widely distributed throughout most tissue sites (as demonstrated by the TiGER Tissue specific gene expression and regulation database; [8]). Furthermore, within specific tissues, Lgals3 protein expression is widespread, with extracellular [9], membrane bound, cytoplasmic, and nuclear localizations (for review, see [10]).

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0048245/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has eosinophil chemotaxis (GO:0048245). Gene/protein: LGALS3. O... Asta Asta Scientific Corpus Retrieval 13 citations 2026-06-22T04:47:08.924360 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has eosinophil chemotaxis (GO:0048245). Gene/protein: LGALS3. O...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 13
  • Snippets retrieved: 19

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.894)
    > Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].According to Table S1, the expression of LGALS3 was statistically positively correlated with several chemokines of immune cells, involving monocytes/macrophages (CCL2, CCL3, CCL5, CCL7, CCL13, CCL17, and CCL22), T lymphocytes (CCL2, CCL1, CCL17, and CCL22), eosinophils (CCL11, CCL26, CCL5, CCL7, CCL13, and CCL3), mast cells (CCR1, CCR2, CCR3, CCR4, CCR5, CXCR2, and CXCR4), and neutrophils (CXCL8).Taken together, these outcomes indicate that LGALS3 is positively associated with immune cell infiltration and cell chemotaxis and could have a crucial function in HCC tumor immune microenvironment.
    > LGALS3 expression correlation and immune cell biomarkers in HCC Next, we wanted to investigate the LGALS3 function in HCC tumor immunity further.Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.
  • Snippet 2 (score: 0.839)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 3 (score: 0.768)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 4 (score: 0.755)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 5 (score: 0.736)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.
  • Snippet 6 (score: 0.707)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.
  • Authors: Shizhen Lei, Mang Hu, Zhongtao Wei
  • Year: 2024
  • Venue: Frontiers in Aging Neuroscience
  • URL: https://www.semanticscholar.org/paper/d298311ebc5a23bc38669dd6a0d0878c1197a687
  • DOI: 10.3389/fnagi.2024.1322519
  • PMID: 38361503
  • PMCID: 10867226
  • Citations: 7
  • Summary: Findings supported that high plasma levels of C3b, CTNNB1, CCL1, and CCL3L1 were associated with increased risk of AMD, thereby highlighting the role of systemic inflammation in AMD pathogenesis and providing the rationale for developing new preventative and therapeutic strategies.
  • Evidence snippets:
  • Snippet 1 (score: 0.807)
    > Related GO annotations Related diseases CCL1 GO:0090026 positive regulation of monocyte chemotaxis; GO:0048245 eosinophil chemotaxis; GO:0032740 positive regulation of interleukin-17 production.
    > Asthma, allergic rhinitis, rheumatoid arthritis, and multiple sclerosis CCL3L1 GO:0048245 eosinophil chemotaxis; GO:0072677 eosinophil migration; GO:0002548 monocyte chemotaxis.
    > HIV infection/AIDS, rheumatoid arthritis C3b GO:0001970 positive regulation of activation of membrane attack complex; GO:0150064 vertebrate eye-specific patterning; GO:0001798 positive regulation of type IIa hypersensitivity.
    > Atypical hemolytic uremic syndrome (aHUS) and AMD CTNNB1 GO:0007403 glial cell fate determination; GO:0044336 canonical Wnt signaling pathway involved in negative regulation of apoptotic process; GO:0061324 canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation.
    > Several types of cancer, including uveal melanoma, colorectal cancer, and ovarian cancer SRPs, senescence-related proteins; AMD, age-related macular degeneration; GO, Gene Ontology.
    > In conclusion, we provided the genetic evidence that plasma levels of C3b, CTNNB1, CCL1, and CCL3L1 are causally associated with risk of AMD, which highlights the role of systemic inflammation in the pathophysiology of AMD. Given that the genes encoding these four proteins are all druggable targets, the findings may contribute to understanding the pathogenesis of AMD and the development of new therapeutic or preventive strategy for AMD.

[3] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.763)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[4] Selective Myeloid Depletion of Galectin-3 Offers Protection Against Acute and Chronic Lung Injury

  • Authors: D. Humphries, R. Mills, R. Dobie, N. Henderson, T. Sethi et al.
  • Year: 2021
  • Venue: Frontiers in Pharmacology
  • URL: https://www.semanticscholar.org/paper/a99f52230baf060d40c3fc80a916fafa3ed62d03
  • DOI: 10.3389/fphar.2021.715986
  • PMID: 34526900
  • PMCID: 8435800
  • Citations: 30
  • Influential citations: 3
  • Summary: Myeloid cell derived Gal-3 drives acute and chronic lung inflammation and supports direct targeting of galectin-3 as an attractive new therapy for lung inflammation.
  • Evidence snippets:
  • Snippet 1 (score: 0.725)
    > Lgals3 flox mice (Lgals3 fl/fl ) were generated as described by Maupin et al. (2018) and crossed with mice expressing either the LysM-cre or the Pdgfrb-cre transgene to obtain mice with a new genomic Lgals3-null allele in the myeloid or mesenchymal compartment. Gal-3 depletion was initially examined in bonemarrow derived cells from LysM-cre + , LysM-cre -and Gal-3 -/- mice (Figures 1A-C). Monocytes and neutrophils obtained from the bone marrow of LysM-cre + mice exhibited a 35 and 75% reduction in surface Gal-3 expression, respectively, when compared to LysM-cre -mice, indicating predominate depletion in neutrophils following recombination. No changes were observed in eosinophils, which displayed low levels of Gal-3. The apparent higher mean fluorescence in Gal-3 −/− eosinophils is due to increased cellular autofluorescence in those cells. There was no difference in the frequency of monocytes, neutrophils or eosinophils between the genotypes (Figure 1D).

[5] The deficiency of galectin-3 in stromal cells leads to enhanced tumor growth and bone marrow metastasis

  • Authors: J. X. Pereira, Maria Carolina Braga Azeredo, Felipe Sá Martins, R. Chammas, F. L. Oliveira et al.
  • Year: 2016
  • Venue: BMC Cancer
  • URL: https://www.semanticscholar.org/paper/5f5ef422f3c44fa24a457d97d0c915ae8188a279
  • DOI: 10.1186/s12885-016-2679-1
  • PMID: 27526676
  • PMCID: 4986277
  • Citations: 12
  • Influential citations: 1
  • Summary: It is demonstrated for the first time that the absence of galectin-3 in the host microenvironment favors the growth of the primary tumors, the metastatic spread to the inguinal lymph nodes and bone marrow colonization by metastatic 4T1 tumor cells.
  • Evidence snippets:
  • Snippet 1 (score: 0.724)
    > We next investigated whether galectin-3 could influence the development of metastasis to the lymph node. Therefore, 28 days post orthotopic injection (p.o.i) of 4T1 cells in Lgals3+/+ or Lgals3−/− mice, the lymph nodes were excised and the presence of CK-19 positive cells was analyzed by immunohistochemistry. We observed that 4T1 cells (CK-19+) were predominantly present in the capsule of the draining lymph node in Lgals3+/+ mice (Fig. 3a) whereas in Lgals3−/− mice, CK-19+ cells were organized as "sheets-like" within the lymph node parenchyma and also found in the capsule (Fig. 3b). Moreover, we evaluated the presence of lymph node metastasis in Lgals3+/+ and Lgals3−/− mice using the 6-thioguanine clonogenic assay and found significant fewer metastasis in Lgals3+/+ mice in comparison to Lgals3−/− mice, both 21 and 28 days p.o.i. (Fig. 3c, p < 0,05). Interestingly though, we also found an increased CK-19 mRNA levels in Lgals3−/− mice at an earlier stage (15 days) p.o.i. (Fig. 3d, p < 0,05). These results suggest that Lgals3−/− mice are more permissive for 4T1 tumor cells dissemination to the inguinal lymph nodes.
    > Galectin-3-deficient bone marrow microenvironment supports more efficiently the growth of metastatic 4T1
    > We have previously described that Lgals3−/− mice presented structural and functional differences in the bone marrow [17]. Likewise, in this study we confirmed differences in terms of cellularity and projections of bone tissue inside the cavity between Balb/c Lgals3+/+ and Lgals3 −/− mice (Fig. 4a and b).

[6] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.715)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex
  • Authors: Xiaofeng Li, Bing Yang
  • Year: 2025
  • Venue: Animal Bioscience
  • URL: https://www.semanticscholar.org/paper/b3da4d3a37ec0fae40140d0cf95db98d90b41079
  • DOI: 10.5713/ab.25.0108
  • PMID: 40506039
  • PMCID: 12580959
  • Citations: 1
  • Summary: A novel paradigm wherein histone phosphorylation coordinates intestinal morphogenesis is established, providing mechanistic insights for optimizing poultry intestinal health and nutritional strategies.
  • Evidence snippets:
  • Snippet 1 (score: 0.713)
    > Notably, as broilers age (from D0 to D7), the intestinal VH increases accordingly, indicating a positive balance between intestinal cell proliferation and apoptosis (i.e., cell proliferation predominates over apoptosis). Through transcriptional network analysis, we identified eight histone phosphorylation-associated hub genes (LGALS3, ITGB2, IRF7, SOCS3, CSF1R, KIF23, SMC2, and DLGAP5) that mechanistically link epigenetic regulation to developmental programming.
    > LGALS3 (galectin-3) plays critical roles in macrophage chemotaxis, mucosal barrier maintenance, intestinal epithelial cell (IEC) apoptosis regulation, and inflammatory responses [21][22][23]. Our study revealed a 6.59-fold increase in LGALS3 gene expression in the duodenum at D7 compared to D0 (Supplement 6), with functional analysis confirming its involvement in macrophage chemotaxis (Supplement 7). These findings align with Sun et al [21], who reported that LGALS3 silencing in necrotizing enterocolitis models inhibited the TLR4/NF-κB pathway, subsequently reducing IEC apoptosis and inflammation [21]. Emerging evidence further suggests LGALS3' s protective functions through ER stress modulation, autophagy regulation, and inflammasome control in intestinal Behçet' s disease [22], along with its capacity to upregulate key mucosal barrier components (MUC2, Occludin, and ZO-1) [23]. Collectively, these observations suggest LGALS3 promotes duodenal development through: 1) mucosal barrier reinforcement via tight junction protein upregulation, 2) inflammatory control through TLR4/NF-κB-mediated macrophage regulation, and 3) cellular homeostasis maintenance via ER stress/autophagy pathways.

[8] Galectin-3, histone deacetylases, and Hedgehog signaling: Possible convergent targets in schistosomiasis-induced liver fibrosis

  • Authors: F. L. de Oliveira, Katia Carneiro, J. Brito, M. Cabanel, J. X. Pereira et al.
  • Year: 2017
  • Venue: PLoS Neglected Tropical Diseases
  • URL: https://www.semanticscholar.org/paper/6dc6d6f3529841361a1ccf76eac911be181636c7
  • DOI: 10.1371/journal.pntd.0005137
  • PMID: 28231240
  • PMCID: 5322873
  • Citations: 31
  • Summary: A possible involvement of Galectin-3 (Gal-3), histone deacetylases (HDACs), and Hedgehog (Hh) signaling with macrophage activation during Th1/Th2 immune responses, fibrogranuloma reaction, and tissue repair during schistosomiasis is suggested.
  • Evidence snippets:
  • Snippet 1 (score: 0.710)
    > It is interesting to point out the presence of myeloid progenitor cells in contact with the hepatocytes, indicating a spreading of these cells out of the periovular granulomas in Lgals3-/-mice (Fig 3D and 3F).
    > Another interesting finding of our studies concerning the composition of inflammatory cells around the egg granulomas in Lgals3-/-mice was the predominance of eosinophils in liver granulomas compared with Lgals3+/+ mice [32]. The GR-HSCs of both groups of mice expressed similar levels of IL-5, the critical cytokines for differentiation and proliferation of eosinophils [41]. In contrast, eotaxin, a main chemoatractant chemokine for eosinophils [42], was significantly downregulated in GR-HSCs in the absence of Gal-3 (Fig 3H). In this context, we can suggest that in the absence of Gal-3, the low expression of eotaxin in GR-HSCs, even without alteration in IL-5 expression, favored the local proliferation of myeloid cells instead of the mobilization from bone marrow (Fig 4).

[9] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.708)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.

[10] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.701)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 2 (score: 0.701)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.

[11] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.699)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[12] Beyond Colonoscopy: Exploring New Cell Surface Biomarkers for Detection of Early, Heterogenous Colorectal Lesions

  • Authors: Saleh M. Ramezani, Arianna Parkhideh, P. Bhattacharya, M. Farach-Carson, D. Harrington
  • Year: 2021
  • Venue: Frontiers in Oncology
  • URL: https://www.semanticscholar.org/paper/4b48091d0ad86a2121491218707db23e88605000
  • DOI: 10.3389/fonc.2021.657701
  • PMID: 34290978
  • PMCID: 8287259
  • Citations: 13
  • Summary: This review contextualizes existing and emergent CRC surface biomarkers and assess each’s potential as a candidate marker for early marker-based detection of CRC lesions and presents an overview of recent advances in imaging techniques useful for visual detection of surface biomarker detection.
  • Evidence snippets:
  • Snippet 1 (score: 0.696)
    > Galectin 3, or LGALS3, is a member of the galectin family, a group of carbohydrate-binding lectins characterized by their binding affinity for beta-galactosides (85).
    > LGALS3 is expressed at the cell surface, where it interacts with the extracellular matrix, especially with glycoproteins, and has the ability to affect intracellular signaling pathways (42). LGALS3-expressing cells also possess higher ALDH1 activity, which often correlates with a dedifferentiated cancer stem cell phenotype, than do their LGALS3-negative counterparts (86).
    > The correlation of LGALS3 expression in CRC with clinical pathological characteristics has been explored in several immunohistochemical and RT-PCR studies. In one study, the IHC staining of CRC tissue (n=61) and normal adjacent tissue (n=23) samples showed significantly higher LGALS3 expression in cancer tissue (62.5%) versus normal cancer-adjacent tissue (13.0%) (41). In another study, 75% of CRC tissue samples stain high for LGALS3, and ten CRC cell lines were shown to have increased LGALS3 protein levels compared to HeLa cells (42).
    > LGALS3 expression varies according to cancer staging and the degree of differentiation of the adenocarcinoma. LGALS3 mRNA levels were higher in early stage colorectal cancers (58% in stage I) compared to advanced cancers (50% in stage IV) (43). Protein analysis found higher LGALS3 levels in primary adenocarcinomas than in metastatic adenocarcinomas, and stronger LGALS3 staining in well-differentiated tumor areas compared to poorly differentiated tumor areas (43). Conversely, colorectal adenocarcinomas may display higher levels of LGALS3 than do colorectal adenomas; one study sets the rate of colorectal adenocarcinoma expression of LGALS3 at 95% while only 73% of adenomas were positive for LGALS3 (43).

[13] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.689)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

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Asta

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Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has macrophage chemotaxis (GO:0048246). Gene/protein: LGALS3. O... Asta Asta Scientific Corpus Retrieval 11 citations 2026-06-22T04:47:16.130840 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has macrophage chemotaxis (GO:0048246). Gene/protein: LGALS3. O...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 11
  • Snippets retrieved: 20

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.980)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 2 (score: 0.947)
    > Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].According to Table S1, the expression of LGALS3 was statistically positively correlated with several chemokines of immune cells, involving monocytes/macrophages (CCL2, CCL3, CCL5, CCL7, CCL13, CCL17, and CCL22), T lymphocytes (CCL2, CCL1, CCL17, and CCL22), eosinophils (CCL11, CCL26, CCL5, CCL7, CCL13, and CCL3), mast cells (CCR1, CCR2, CCR3, CCR4, CCR5, CXCR2, and CXCR4), and neutrophils (CXCL8).Taken together, these outcomes indicate that LGALS3 is positively associated with immune cell infiltration and cell chemotaxis and could have a crucial function in HCC tumor immune microenvironment.
    > LGALS3 expression correlation and immune cell biomarkers in HCC Next, we wanted to investigate the LGALS3 function in HCC tumor immunity further.Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.
  • Snippet 3 (score: 0.814)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 4 (score: 0.809)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 5 (score: 0.792)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.
  • Snippet 6 (score: 0.766)
    > Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.Table S2 lists that LGALS3 demonstrated a significant positive association with various immune cell biomarkers, including B cell (CD19 and CD79A), CD4 + T cell (CD4), CD8 + T cell (CD8A and CD8B), neutrophil (ITGAM and CCR7), M1 macrophage (NOS2, IRF5, and PTGS2), M2 macrophage (CD163, VSIG4, and MS4A4A), dendritic cell (HLA-DPB1, HLA-DQB1, HLA-DRA, HLA-DPA1, CD1C, NRP1, and ITGAX) and CAFs (FAP, ACTA2, S100A4, PDPN, PDGFR, and CD70) in HCC.
    > Our results indicate that LGALS3 has a significant positive connection to the immune infiltration within HCC, especially CAFs.

[2] LGALS3 Is a Poor Prognostic Factor in Diffusely Infiltrating Gliomas and Is Closely Correlated With CD163+ Tumor-Associated Macrophages

  • Authors: Wan-Ming Hu, Yuan-Zhong Yang, Tian Zhang, Changling Qin, Xuenong Li
  • Year: 2020
  • Venue: Frontiers in Medicine
  • URL: https://www.semanticscholar.org/paper/53b083f91a08aefebb5f9edaaa95625e2dc98f2b
  • DOI: 10.3389/fmed.2020.00182
  • PMID: 32528967
  • PMCID: 7254797
  • Citations: 18
  • Influential citations: 1
  • Summary: LGALS3 was an independent poor prognostic marker in diffusely infiltrating gliomas and was positively correlated with immune cell infiltration, particularly CD163+ tumor-associated macrophages in the TCGA dataset, Rembrandt dataset, and the SYSUCC cohort.
  • Evidence snippets:
  • Snippet 1 (score: 0.856)
    > This may explain why LGALS3 positive glioma patients have a significantly shorter OS than LGALS3 negative patients, suggesting that LGALS3 may play a role in malignant progression in glioma through changing the immune microenvironment in glioma. Some studies have also confirmed that LGALS3 played a key role in glioma development through increasing cell motility and invasion (21,22). Vladimirova et al. (23) found that LGALS3 expression was mediated by Runx-2 transcription factors, which contributed to the malignant progression of glial tumors. Conversely, only Gordower et al. (24) reported that LGALS3 expression decreased as the WHO level increased in astrocytic tumors. We think the reason for this difference may be partially due to the small number of patient samples in their study. Moreover, online database analysis also verified our results. Patients with high expression of LGALS3 mRNA had a poor prognosis.
    > LGALS3 was closely related to IDH status, CD163+ TAMs and was mainly expressed in IDH wild-type glioma. It is worth noting that LGALS3 mRNA was highly expressed in the mesenchymal subtype, a more malignant TCGA GBM subtype with a higher tendency for recurrence, metastasis, and increased vascularity.
    > Most importantly, we found that LGALS3 was involved in the regulation of the glioma immune microenvironment, particularly CD163+ TAMs. There is growing evidence that complex tumor microenvironments contribute to the malignant progression of gliomas (25,26). Among the components of the tumor microenvironment, tumor-associated macrophages (TAMs) are considered to provide important support for tumor growth. Macrophages are divided into M1 and M2 subtypes according to their functions. Typically, CD68 is a general marker for macrophages, while CD163 is considered to be a highly specific marker for M2 type macrophages.
  • Snippet 2 (score: 0.791)
    > Background: Glioma, the most common brain tumor, is a heterogeneous group of glia-derived tumors, the majority of which have characteristics of diffuse infiltration and immunosuppression. The LGALS protein family is a large class of sugar-binding proteins. Among them, LGALS3 has been reported to promote tumor development and progression in some cancers. However, the clinical significance and biological functions of LGALS3 in glioma remain virtually unknown. The purpose of our research is to detect LGALS3 expression and its prognostic value in glioma and reveal the relationship between its expression and the clinico/molecular-pathological features of patients and immune cell infiltration. Methods: LGALS3 protein expression was examined by immunohistochemistry. The mRNA expression data of LGALS3 was downloaded and analyzed from TCGA and Rembrandt datasets. The association between LGALS3 and glioma clinically relevant diagnostic/molecular markers (IDH, 1p19q, ATRX, MGMT, and TERT) was examined using the Chi-Squared (χ2) test. The correlation between LGALS3 expression and the infiltration of multiple intra-tumoral immune cell types, including B cells (CD20), T cells (CD4 and CD8), macrophages (CD68), and M2 tumor-associated macrophages (CD163), was evaluated by Spearman correlation analysis. Kaplan-Meier analysis and the Cox regression analysis were applied to evaluate the prognostic value of LGALS3 in glioma. The log-rank test was used to evaluate Kaplan-Meier results for significance. Results: Out of all 304 glioma cases, LGALS3 protein was expressed in 125 glioma cases (41.1%, 125/304), with 69.2% (9/13) in WHO I, 9.8% (8/82) in WHO II, 34.2% (26/76) in WHO III, and 61.7% (82/133) in WHO IV. The expression of LGALS3 was correlated with patient age, WHO grade, PHH3 (mitosis), Ki67 index,
  • Snippet 3 (score: 0.782)
    > Spearman correlation analysis revealed that CD20+ B cells were not correlated with LGALS3 expression (Figure 3F), but significant positive correlations were found between the infiltration of CD4+ T cells (Figure 3G), CD8+ T cells (Figure 3H), CD68+ macrophages (Figure 3I), CD163+ TAMs (Figure 3J), and the expression of LGALS3. In addition, the number of CD163+ TAMs infiltration was strongly correlated with LGALS3 (R = 0.724) in our cohort (Figure 3J).
  • Snippet 4 (score: 0.774)
    > Typically, CD68 is a general marker for macrophages, while CD163 is considered to be a highly specific marker for M2 type macrophages. CD68+ macrophages are usually activated during antigen presentation and inflammatory responses, while CD163+ macrophages have a large number of anti-inflammatory cytokines that contribute to immunosuppression and promote tumor development. Multiple studies have shown that TAMs can actively suppress adaptive immunity, promote tumor growth, and angiogenesis, and are very similar to M2 macrophages (27,28). A previous study (29) confirmed that CD163+ TAMs played an important role in the biological process of glioma and that high expression of CD163 predicted poor prognosis in glioma patients. Another study suggested that the expression level of LGALS3 might affect macrophage infiltration in brain tumors (30), but only 16 GBM samples were used in their study. In the present study, we investigated the relationship between LGALS3 and TAMs in a large sample (304 glioma cases including 133 cases of GBM). We found that CD163+ TAMs were abundant in glioma, particularly in GBM and that LGALS3 was strongly correlated with the number of TAMs. GO and KEGG analyses also revealed that LGALS3 was involved in important inflammation and immune pathways, including cytokine signaling, NF-kappa B, NOD receptor, and the TNF signaling pathway. These results indicated that LGALS3 was involved in inflammatory and immune responses, which further contributed to malignant progression and shorter survival in glioma patients. However, the mechanism by which LGALS3 affects the glioma immune microenvironment and the exact pathways associated with LGALS3 in glioma need to be further explored in future studies.
    > In conclusion, we have shown that LGALS3 is a novel biomarker that is highly expressed in pilocytic astrocytoma, GBM, and IDH wild-type LGG. LGALS3 is associated with poor prognosis in diffusely infiltrating glioma and served as an important prognostic biomarker in LGG and GBM.
  • Authors: Xiaofeng Li, Bing Yang
  • Year: 2025
  • Venue: Animal Bioscience
  • URL: https://www.semanticscholar.org/paper/b3da4d3a37ec0fae40140d0cf95db98d90b41079
  • DOI: 10.5713/ab.25.0108
  • PMID: 40506039
  • PMCID: 12580959
  • Citations: 1
  • Summary: A novel paradigm wherein histone phosphorylation coordinates intestinal morphogenesis is established, providing mechanistic insights for optimizing poultry intestinal health and nutritional strategies.
  • Evidence snippets:
  • Snippet 1 (score: 0.838)
    > Notably, as broilers age (from D0 to D7), the intestinal VH increases accordingly, indicating a positive balance between intestinal cell proliferation and apoptosis (i.e., cell proliferation predominates over apoptosis). Through transcriptional network analysis, we identified eight histone phosphorylation-associated hub genes (LGALS3, ITGB2, IRF7, SOCS3, CSF1R, KIF23, SMC2, and DLGAP5) that mechanistically link epigenetic regulation to developmental programming.
    > LGALS3 (galectin-3) plays critical roles in macrophage chemotaxis, mucosal barrier maintenance, intestinal epithelial cell (IEC) apoptosis regulation, and inflammatory responses [21][22][23]. Our study revealed a 6.59-fold increase in LGALS3 gene expression in the duodenum at D7 compared to D0 (Supplement 6), with functional analysis confirming its involvement in macrophage chemotaxis (Supplement 7). These findings align with Sun et al [21], who reported that LGALS3 silencing in necrotizing enterocolitis models inhibited the TLR4/NF-κB pathway, subsequently reducing IEC apoptosis and inflammation [21]. Emerging evidence further suggests LGALS3' s protective functions through ER stress modulation, autophagy regulation, and inflammasome control in intestinal Behçet' s disease [22], along with its capacity to upregulate key mucosal barrier components (MUC2, Occludin, and ZO-1) [23]. Collectively, these observations suggest LGALS3 promotes duodenal development through: 1) mucosal barrier reinforcement via tight junction protein upregulation, 2) inflammatory control through TLR4/NF-κB-mediated macrophage regulation, and 3) cellular homeostasis maintenance via ER stress/autophagy pathways.

[4] Phenotypic Switching of Vascular Smooth Muscle Cells in Atherosclerosis

  • Authors: Runji Chen, D. McVey, D. Shen, Xiaoxin Huang, Shu Ye
  • Year: 2023
  • Venue: Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
  • URL: https://www.semanticscholar.org/paper/472c313e2214a97757712ab0a8b39b133bd6a6bc
  • DOI: 10.1161/JAHA.123.031121
  • PMID: 37815057
  • PMCID: 10757534
  • Citations: 133
  • Influential citations: 2
  • Summary: This review article discusses the 9 VSMC phenotypes that have been reported in atherosclerotic lesions and classifies them into differentiated VSMCs, intermediately dedifferentiated VSMCs, and dedifferentiated VSMCs.
  • Evidence snippets:
  • Snippet 1 (score: 0.835)
    > Lgals3 (also referred to as galectin-3) is considered a marker of macrophage-like cells. 13,31 Rong et al detected a population of VSMCs that expressed Lgals3 following cholesterol loading in vitro. 31 Recently, Alencar et al found that Lgals3 activation is not a specific marker of the differentiation of VSMCs to a macrophage-like state but rather it is a marker of VSMCs entering a transitional state, with increased expression of genes associated with stem cells that are capable of extracellular matrix remodeling. 16 Of note, similar to SEM-like cells, Lgals3 + cells also have increased expression of lymphocyte antigen 6 family member A and vascular cell adhesion molecule 1. Further studies to investigate if SEM-like cells are derived from Lgals3 + cells are warranted.
    > Using mouse, rat, and human models of cholesterolloading in VSMCs, Li et al found that SREBP1 (sterol regulatory-element binding protein-1) and Krüppel-like factor-15 induced up-and downregulation of Lgals3, respectively, via binding to the Lgals3 gene promoter (albeit at different sites). 45 Likewise, Lgals3 promoted SREBP1 gene expression, producing a feedforward loop upregulated by cholesterol loading. 45 Moreover, Lgals3 and SREBP1 downregulated myocardin-related transcription factor A expression in VSMCs. 45 In another study, Owsiany et al used a dual lineage tracing model and found that Lgals3 + VSMCs produce monocyte chemoattractant protein 1, a proinflammatory chemokine. 15 Knockout of monocyte chemoattractant protein 1 specifically in Lgals3 + VSMCs resulted in the formation of atherosclerotic lesions with a greater ACTA2 content in the fibrous cap and decreased Lgals3 + cell content, a feature of stable plaque. 15

[5] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.794)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[6] Secreted Factors and EV-miRNAs Orchestrate the Healing Capacity of Adipose Mesenchymal Stem Cells for the Treatment of Knee Osteoarthritis

  • Authors: E. Ragni, C. Perucca Orfei, P. De Luca, A. Colombini, M. Viganò et al.
  • Year: 2020
  • Venue: International Journal of Molecular Sciences
  • URL: https://www.semanticscholar.org/paper/7d8d9d140ae309da10710f17dc979236a67fb966
  • DOI: 10.3390/ijms21051582
  • PMID: 32111031
  • PMCID: 7084308
  • Citations: 67
  • Influential citations: 1
  • Summary: Light is shed about the way ASCs regulate cell homeostasis and regenerative pathways in an OA-resembling environment, therefore suggesting a rationale for the use of MSC-enriched clinical products, such as stromal vascular fraction and microfragmented adipose tissue, in joint pathologies.
  • Evidence snippets:
  • Snippet 1 (score: 0.788)
    > 903, seven) and regulation of protein secretion (GO:0050708, 19) and, for the (ii) response to stimulus cascade-inflammatory response (GO:0006954, 31). Further, due to the reported role of ASCs in modulating synovial macrophages, the inflammatory response list was sifted through a Panther algorithm to identify specific and macrophage-related GO terms. A few terms emerged: macrophage chemotaxis (GO:0048246, two factors) and migration (GO:1905517), both defined by CCL3 and CCL5; the positive regulation of macrophage differentiation (GO:0045651) and regulation of macrophage differentiation (GO:0045649), both defined by CSF1 and TGFB1; the positive regulation of macrophage chemotaxis (GO:0010759, CCL5 and CSF1) and regulation of macrophage chemotaxis (GO:0010758, CSF1, CCL5 and MIF) and the positive regulation of macrophage activation (GO:0043032, CCL3 and IL13) and regulation of macrophage activation (GO:0043030, CCL3, IL13 and MIF). Eventually, to have a comprehensive overview of the entire dataset, in the inflammatory response terms, nine proteins of the > 10 ng group also fell (CCL2, CXCL10, CXCL5, EGFR, ICAM1, IGFBP4, IL6, TIMP1 and TNFRSF1A). CCL2 belonged to macrophage chemotaxis, LIF to the regulation of macrophage differentiation and IL1RL1 and IL6 to macrophage activation. Related to macrophages and their ability to migrate, monocyte chemotaxis (GO:0002548, IL6 and CCL2) emerged. Interestingly, other GO terms related with motility were identified, like leukocyte chemotaxis (GO:0030595, IL6, CCL2, CXCL5 and CXCL10); lymphoc

[7] Macrophage-derived Spp1 promotes intramuscular fat in dystrophic muscle

  • Authors: Philip K Farahat, Chino Kumagai-Cresse, Raquel L. Aragón, Feiyang Ma, Justin K. Amakor et al.
  • Year: 2025
  • Venue: JCI Insight
  • URL: https://www.semanticscholar.org/paper/25c265aed44730ce4b23491cd7ac24d8c3fcf94b
  • DOI: 10.1172/jci.insight.181946
  • PMID: 40626359
  • PMCID: 12288893
  • Citations: 7
  • Summary: A role for myeloid-derived Spp1 in the differentiation of stromal cells towards an adipogenic fate, leading to accumulation of intramuscular fat in dystrophic muscles is suggested.
  • Evidence snippets:
  • Snippet 1 (score: 0.786)
    > Lgals3 clusters 2 and 3 expressed the highest Spp1. All Spp1-expressing clusters showed a drastic reduction in Spp1 in the cKO (Figure 2B, compare blue and green) (8). Lgals3-2 cells also expressed Arg1 while Lgals3-3 expressed Igf1 (11). The proportion of different monocyte/macrophage subtypes was evaluated in the 2 genotypes (Figure 2, C and D). While the proportion of Lgals3-3 and Lgals3-2 remained similar in the 2 genotypes, a mild increase in Lgals3-1 was observed in the cKO, while both monocyte subclusters slightly decreased in the cKO (Figure 2C). Although the overall number of macrophages increased in the cKO (mdx:969 vs cKO 4,028), cKO macrophages did not show large changes in the cellular frequency of subtypes (Figure 2D). Inflammatory genes were either unchanged or slightly reduced in the cKO, including the chemokines Ccl3 and Ccl4 (Figure 2F) and Tgfb1 (Supplemental Figure 2B). However, IFN genes such as Ifi207, Ifi204, and Isg15 were slightly increased in cKO monocytes (Figure 2F).

[8] Macrophages secrete murinoglobulin-1 and galectin-3 to regulate neutrophil degranulation after myocardial infarction

  • Authors: Upendra Chalise, M. Daseke, William J. Kalusche, Shelby R. Konfrst, Jocelyn R. Rodriguez-Paar et al.
  • Year: 2022
  • Venue: Molecular Omics
  • URL: https://www.semanticscholar.org/paper/446873a6222f1a5c4299cb80c95f7f9ff792e9f8
  • DOI: 10.1039/d1mo00519g
  • PMID: 35230372
  • PMCID: 8963000
  • Citations: 18
  • Summary: In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals3 to accentuate neutrophil degranulation to regulate infarct wall thinning.
  • Evidence snippets:
  • Snippet 1 (score: 0.765)
    > Inflammation presides early after myocardial infarction (MI) as a key event in cardiac wound healing. Ischemic cardiomyocytes secrete inflammatory cues to stimulate infiltration of leukocytes, predominantly macrophages and neutrophils. Infiltrating neutrophils degranulate to release a series of proteases including matrix metalloproteinase (MMP)-9 to break down extracellular matrix and remove necrotic myocytes to create space for the infarct scar to form. While neutrophil to macrophage communication has been explored, the reverse has been understudied. We used a proteomics approach to catalogue the macrophage secretome at MI day 1. Murinoglobulin-1 (MUG1) was the highest-ranked secreted protein (4.1-fold upregulated at MI day 1 vs. day 0 pre-MI cardiac macrophages, p = 0.004). By transcriptomics evaluation, galectin-3 (Lgals3) was 2.2-fold upregulated (p = 0.008) in MI day 1 macrophages. We explored the direct roles of MUG1 and Lgals3 on neutrophil degranulation. MUG1 blunted while Lgals3 amplified neutrophil degranulation in response to phorbol 12-myristate 13-acetate or interleukin-1β, as measured by MMP-9 secretion. Lgals3 itself also stimulated MMP-9 secretion. To determine if MUG1 regulated Lgals3, we co-stimulated neutrophils with MUG1 and Lgals3. MUG1 limited degranulation stimulated by Lgals3 by 64% (p < 0.001). In vivo, MUG1 was elevated in the infarct region at MI days 1 and 3, while Lgals3 increased at MI day 7. The ratio of MUG1 to Lgals3 positively correlated with infarct wall thickness, revealing that MUG1 attenuated infarct wall thinning. In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals
  • Snippet 2 (score: 0.755)
    > while Lgals3 increased at MI day 7. The ratio of MUG1 to Lgals3 positively correlated with infarct wall thickness, revealing that MUG1 attenuated infarct wall thinning. In conclusion, macrophages at MI day 1 secrete MUG1 to limit and Lgals3 to accentuate neutrophil degranulation to regulate infarct wall thinning.

[9] Galectin-3, histone deacetylases, and Hedgehog signaling: Possible convergent targets in schistosomiasis-induced liver fibrosis

  • Authors: F. L. de Oliveira, Katia Carneiro, J. Brito, M. Cabanel, J. X. Pereira et al.
  • Year: 2017
  • Venue: PLoS Neglected Tropical Diseases
  • URL: https://www.semanticscholar.org/paper/6dc6d6f3529841361a1ccf76eac911be181636c7
  • DOI: 10.1371/journal.pntd.0005137
  • PMID: 28231240
  • PMCID: 5322873
  • Citations: 31
  • Summary: A possible involvement of Galectin-3 (Gal-3), histone deacetylases (HDACs), and Hedgehog (Hh) signaling with macrophage activation during Th1/Th2 immune responses, fibrogranuloma reaction, and tissue repair during schistosomiasis is suggested.
  • Evidence snippets:
  • Snippet 1 (score: 0.756)
    > Indeed, considering that the first step of the infection is under the control of a macrophage, the outcome of the disease needs to be further investigated, including in the Lgals3-/-infected mice. The downmodulation of macrophages in Lgals3-/-infected mice during the first step of the infection could be directly associated with a type of fibrogranulomatous reaction in the liver and, consequently, drive profibrotic events during schistosomiasis.

[10] Galectin-3 Identifies a Subset of Macrophages With a Potential Beneficial Role in Atherosclerosis

  • Authors: K. Di Gregoli, M. Somerville, Rosaria Bianco, Anita C. Thomas, Aleksandra Frankow et al.
  • Year: 2020
  • Venue: Arteriosclerosis, Thrombosis, and Vascular Biology
  • URL: https://www.semanticscholar.org/paper/7cc49f01469f15e073d249c35f5b1deb45262ade
  • DOI: 10.1161/ATVBAHA.120.314252
  • PMID: 32295421
  • PMCID: 7253188
  • Citations: 79
  • Summary: A prominent protective role is revealed for galectin-3 in regulating macrophage polarization and invasive capacity and, therefore, delaying plaque progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.749)
    > Macrophage buildup within atherosclerotic lesions is at least, in part, due to enhanced monocyte/macrophage recruitment and is associated with the progression of plaques. 35 As macrophage (CD68-positive cells) content was increased within plaques of galectin-3 mice, we assessed galectin-3 modulation on macrophage accumulation in vitro and in vivo, as a surrogate indicator of steady-state invasion. The in vitro invasive capacity of macrophages from Lgals3 −/− mice was significantly increased in comparison to cells from Lgals3 +/+ wild-type mice (2.2-fold increase; P<0.001; Figure 3A). Conversely, the number of invading Lgals3 −/− macrophages was diminished through addition of exogenous recombinant galectin-3 compared with untreated cells (69%; P<0.001; Figure 3B). Furthermore, and consistent with our in vitro data, the number of macrophages recruited and accrued within implanted Matrigel-infused sponges was significantly increased within Lgals3 −/− mice in comparison to Lgals3 +/+ animals (1.6-fold increase; P<0.001; Figure 3C). These data support a key role for galectin-3 in retarding macrophage invasive capacity and may explain the observed increase in (CD68 positive) macrophage numbers within brachiocephalic plaques of Lgals 3 −/− :Apoe −/− mice.

[11] Physical Activity Attenuates the Obesity-Induced Dysregulated Expression of Brown Adipokines in Murine Interscapular Brown Adipose Tissue

  • Authors: T. Sakurai, Toshiyuki Fukutomi, Sachiko Yamamoto, Eriko Nozaki, T. Kizaki
  • Year: 2021
  • Venue: International Journal of Molecular Sciences
  • URL: https://www.semanticscholar.org/paper/c62f909c1038a72ef7c427bfa9914983c22b5422
  • DOI: 10.3390/ijms221910391
  • PMID: 34638731
  • PMCID: 8508858
  • Citations: 2
  • Summary: Results indicate that PA attenuates the obesity-induced dysregulated expression of brown adipokines and suggests that Lgals3 and Lgal3bp are involved in brown adipocyte differentiation.
  • Evidence snippets:
  • Snippet 1 (score: 0.748)
    > In the present study, we identified humoral factors from HB2 brown adipocytes similar to those reported by Villarroya et al. [30] using murine brown preadipocytes in BAT. Among these humoral factors, Ccl9, Lgals3, and Lgals3bp were found to be brown adipokines with gene expressions that were largely influenced by obesity and PA. Ccl9, which is also known as macrophage inflammatory protein 1-γ, is a chemokine belonging to the CC chemokine family [45] and is known to play an important role in anti-leukemia and bone resorption procedures. Although there are very few reports of the effect of Ccl9 on adipocytes, it is known to inhibit the differentiation of white adipocytes [46].
    > The Lgals3 protein (galectin-3) is involved in biological processes such as cell adhesion, inflammation, and apoptosis. Lgals3 is upregulated in the WAT and the BAT of obese mice and can attenuate insulin signaling in white adipocytes [41]. Furthermore, obese and diabetic individuals were shown to have higher blood levels of the Lgals3 protein, which parallels the deterioration of glucose homeostasis and suggests that Lgals3 may be involved in the development of obesity and type 2 diabetes [41]. In addition, studies using Lgals3 KO mice reported decreases in body and fat masses in HFD-fed Lgals3 KO mice by comparison with control mice [47]. However, another study using Lgals3 KO mice demonstrated that Lgals3 deficiency accelerates adiposity, levels of adipose tissue, and systemic inflammation associated with altered glucose homeostasis [48,49]. Additionally, Lgals3 is known to stimulate the differentiation of preadipocytes into mature white adipocytes in vitro [47]. On the other hand, human Lgals3bp has long been regarded as an important clinical tumor biomarker associated with disease diagnosis, negative prognosis, and poor response to therapy [50].

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0050918/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has positive chemotaxis (GO:0050918). Gene/protein: LGALS3. Org... Asta Asta Scientific Corpus Retrieval 11 citations 2026-06-22T04:46:17.107395 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has positive chemotaxis (GO:0050918). Gene/protein: LGALS3. Org...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 11
  • Snippets retrieved: 19

Relevant Papers

[1] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.826)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].
  • Snippet 2 (score: 0.810)
    > Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].According to Table S1, the expression of LGALS3 was statistically positively correlated with several chemokines of immune cells, involving monocytes/macrophages (CCL2, CCL3, CCL5, CCL7, CCL13, CCL17, and CCL22), T lymphocytes (CCL2, CCL1, CCL17, and CCL22), eosinophils (CCL11, CCL26, CCL5, CCL7, CCL13, and CCL3), mast cells (CCR1, CCR2, CCR3, CCR4, CCR5, CXCR2, and CXCR4), and neutrophils (CXCL8).Taken together, these outcomes indicate that LGALS3 is positively associated with immune cell infiltration and cell chemotaxis and could have a crucial function in HCC tumor immune microenvironment.
    > LGALS3 expression correlation and immune cell biomarkers in HCC Next, we wanted to investigate the LGALS3 function in HCC tumor immunity further.Utilizing GEPIA databases, we studied the correlation between LGALS3 expression and immune cell biomarkers within HCC.
  • Snippet 3 (score: 0.777)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 4 (score: 0.774)
    > analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly higher immune cell scores and immune checkpoint expression levels. Finally, GSVA analysis was performed to predict potential signaling pathways linked to LGALS3 and HCP5 in immune evasion and metabolic reprogramming of HCC. Our findings indicated that the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Snippet 5 (score: 0.750)
    > Zhang et al. [14] suggested overexpression of LGALS3 promoted HCC bone metastasis and induced associated skeletal complications.Nevertheless, the expression, prognosis, epigenetic, and molecular regulatory mechanisms of LGALS3 in HCC have been incompletely studied.In addition, LGALS3 relation with immune infiltration in HCC TME has yet to be inadequately investigated.
    > This work began with a pan-cancer study of LGALS3 expression and its predictive value in a variety of human malignancies.We further explored the LGALS3 potential upstream regulatory noncoding RNAs (ncRNAs) involving microRNAs (miRNAs) as well as long noncoding RNAs (lncRNAs) throughout HCC.Subsequently, in HCC, a correlation analysis was investigated between LGALS3 and tumor immunity-related indicators involving cell chemotaxis, immune checkpoints, immune cell biomarkers, and infiltration.Eventually, the association between the expression of LGALS3 and signaling pathways was examined in HCC.Findings demonstrated that LGALS3 might have a role in the malignancy of HCC and immune cell infiltration via the HCP5/hsa-miR-27b-3p/ LGALS3 axis, suggesting that a novel HCP5/hsa-miR-27b-3p/LGALS3 axis could be a biomarker for prognosis and treatment target for HCC patients.
  • Snippet 6 (score: 0.707)
    > LGALS3 has a crucial function in mediating cell adhesion as well as cell-cell interaction by recognizing complex carbohydrates on the surface of cells [22,23], as well as regulates cell apoptosis, autophagy, and inflammation [24,25].Interestingly, recent studies suggested that LGALS3 involves in essential cancer-related mechanisms, including cellular metabolism, carcinogenesis, metastasis, neoplasia, angiogenesis, as well as immune escape [26][27][28].In addition, LGALS3 is highly expressed and implicated in different cancer types progression such as HCC, gastric, colorectal, pancreatic carcinomas, melanomas or glioblastomas and breast cancer [29,30].Indeed, LGALS3 has been considered a potential marker for these malignancies.Interestingly, LGALS3, which is differentially expressed in different cancers, has been shown to exhibit tumor suppressor activity in certain cancer types.The different roles of LGALS3 may be attributed to different potential mechanisms that appear cancer-type dependent.The different locations and mutations of LGALS3 also contribute to its various functions.However, LGALS3 remains inadequately understood in HCC and requires further investigation.First, we conducted an extensive investigation of the expression profile, clinical prognosis, and pathologic stage of LGALS3 in HCC through an in-depth analysis of the public database.On the basis of TCGA and CPTAC datasets, we found that LGALS3 gene and protein expression was elevated in HCC tissues.Moreover, the OS and DSS were lesser in patients with HCC having higher expression levels of LGALS3 contrasted to those with low expression levels of LGALS3 based on GEPIA2 and Kaplan-Meier plotter datasets.Meanwhile, the expression of LGALS3 within HCC was significantly associated with the advanced tumor stage and grade, indicating that elevated LGALS3 expression could increase tumor progression.Song et al. [31] indicated that galectin-3 promoted HCC tumorigenesis and metastasis via β-catenin signalling in vitro and in vivo.

[2] Increased LGALS3 expression independently predicts shorter overall survival in patients with the proneural subtype of glioblastoma

  • Authors: Xia He, Sunfu Zhang, Jun-chen Chen, Dekang Li
  • Year: 2019
  • Venue: Cancer Medicine
  • URL: https://www.semanticscholar.org/paper/e5ebda3eeb9ae3c62aaea1ded13f19ca3632de24
  • DOI: 10.1002/cam4.2075
  • PMID: 30848102
  • PMCID: 6536958
  • Citations: 23
  • Influential citations: 1
  • Summary: It is inferred that LGALS3 expression serves as an independent biomarker of shorter OS in the proneural subtype of GBM, the expression of which might be regulated in an epigenetic manner.
  • Evidence snippets:
  • Snippet 1 (score: 0.761)
    > Using IHC staining images and protein expression scoring in the HPA, we examined LGALS3 and LGALS3BP protein expression in normal brain and GBM tissues. According to the data in the HPA, LGALS3 and LGALS3BP protein expression was not detectable in glial cells in normal brain tissues (Figure 2 with LGALS3 examined, 8 cases showed positive LGALS3 staining (3 low and 5 medium) (Figure 2, right). In addition, 8 out of 10 GBM cases had positive LGALS3BP staining (1 low, 2 medium and 5 high). These findings confirmed that LGALS3 and LGALS3BP were expressed at the protein level in GBM tissues.

[3] In-depth quantitative proteomics analysis revealed C1GALT1 depletion in ECC-1 cells mimics an aggressive endometrial cancer phenotype observed in cancer patients with low C1GALT1 expression

  • Authors: A. Montero‐Calle, Á. López-Janeiro, Marta L. Mendes, Daniel Perez-Hernandez, Irene Echevarría et al.
  • Year: 2023
  • Venue: Cellular Oncology
  • URL: https://www.semanticscholar.org/paper/92b64e01bcb30f7457ddb8cc4be26de8b0c7cf69
  • DOI: 10.1007/s13402-023-00778-w
  • PMID: 36745330
  • PMCID: 10205863
  • Citations: 19
  • Summary: C1GALT1 stably depleted ECC-1 cells mimic an EC aggressive phenotype observed in patients and might be useful for the identification and validation of EC markers of progression.
  • Evidence snippets:
  • Snippet 1 (score: 0.744)
    > Finally, since LGALS3 (Galectin-3) has been shown to interact with O-glycans in the mucosal epithelium [30], and considering its overexpression observed by proteomics and further confirmed by PCR and WB analyses upon depletion of C1GALT1, we focused on the role of LGALS3 in EC by IHC.
    > A total of 151 out of 178 cores from 79 EC patients were considered adequate for LGALS3 expression assessment by IHC. Morphologic assessment of LGALS3 IHC staining characteristics revealed different staining patterns (Fig. 5 A). Out of the 151 evaluable cores, 45 (29.8%) showed absent LGALS3 expression. LGALS3 positive samples showed variable and low intensity protein expression (mean positive tumor cells per sample = 35.4%). A small subset of cores (13/151, 8.6%) demonstrated diffuse (> 90% positive tumor cells per sample) staining. LGALS3 score varied across histologic types, with serous and undifferentiated tumors displaying the highest protein expression (median IHC LGALS3 score = 10, 20, 50 and 55 for endometrioid, clear cell, serous and undifferentiated tumor types, respectively) (Fig. 5B). Interestingly, the aggressive histologic variants (clear cell, serous and undifferentiated) showed higher LGALS3 IHC scores than endometrioid variants (p value < 0.001). In addition, LGALS3 expression positively correlated with tumor grade. High grade tumors (G3) displayed higher protein expression (median LGALS3 IHC score = 30) compared to low grade tumors (median LGALS3 IHC score for G1/G2 tumors = 10). This finding was independent of histologic type, as similar results were observed when analyzing endometrioid tumors.
    > Finally, we interrogated the correlation between the expression levels of LGALS3 and C1GALT1.

[4] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.740)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.
  • Snippet 2 (score: 0.712)
    > Scale bar: 10 μm. (I) Immunofluorescent analysis of the colocalization of LGALS3 with ubiquitin in CRC cells treated with or without 0.50 μM periplocin for 24 h. Scale bar: 10 μm. (J) Representative fluorescent images of CRC cells transiently expressing Mrfp-GFP-tandem fluorescent-tagged LGALS3 (tfGal3) followed by 0.50 μM periplocin treatment for 24 h. Scale bar: 10 μm. (K) Quantitative analysis of the GFP + RFP + or GFP − RFP + LGALS3 puncta in (J). (L) the relative decreased ratio of Magic Red intensity, relative increased ratio of LysoSensor Blue intensity, relative increased ratio of the interaction between LGALS3 and TRIM16, and relative increased ratio of LC3B-II protein level in DLD-1 cells following 0.50 μM periplocin treatment at different time periods. Results are representative of three independent experiments. Data are presented as mean ± SD. P < 0.05, P < 0.01, **P < 0.001. for LGALS3 degradation, we generated lysine to arginine mutants of LGALS3 at K196 or Lys210 (LGALS3 K196R or LGALS3 K210R ). As shown in Figure 6I, the ubiquitinconjugated level of LGALS3 K196R mutant was comparable to the wild type (WT), whereas K210 mutation significantly decreased LGALS3 ubiquitination. These results suggest that periplocin elevates LGALS3 level by preventing K210 ubiquitination and proteasomal degradation. In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3.
  • Snippet 3 (score: 0.711)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.

[5] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.739)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[6] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.731)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.716)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.

[7] The deficiency of galectin-3 in stromal cells leads to enhanced tumor growth and bone marrow metastasis

  • Authors: J. X. Pereira, Maria Carolina Braga Azeredo, Felipe Sá Martins, R. Chammas, F. L. Oliveira et al.
  • Year: 2016
  • Venue: BMC Cancer
  • URL: https://www.semanticscholar.org/paper/5f5ef422f3c44fa24a457d97d0c915ae8188a279
  • DOI: 10.1186/s12885-016-2679-1
  • PMID: 27526676
  • PMCID: 4986277
  • Citations: 12
  • Influential citations: 1
  • Summary: It is demonstrated for the first time that the absence of galectin-3 in the host microenvironment favors the growth of the primary tumors, the metastatic spread to the inguinal lymph nodes and bone marrow colonization by metastatic 4T1 tumor cells.
  • Evidence snippets:
  • Snippet 1 (score: 0.725)
    > We next investigated whether galectin-3 could influence the development of metastasis to the lymph node. Therefore, 28 days post orthotopic injection (p.o.i) of 4T1 cells in Lgals3+/+ or Lgals3−/− mice, the lymph nodes were excised and the presence of CK-19 positive cells was analyzed by immunohistochemistry. We observed that 4T1 cells (CK-19+) were predominantly present in the capsule of the draining lymph node in Lgals3+/+ mice (Fig. 3a) whereas in Lgals3−/− mice, CK-19+ cells were organized as "sheets-like" within the lymph node parenchyma and also found in the capsule (Fig. 3b). Moreover, we evaluated the presence of lymph node metastasis in Lgals3+/+ and Lgals3−/− mice using the 6-thioguanine clonogenic assay and found significant fewer metastasis in Lgals3+/+ mice in comparison to Lgals3−/− mice, both 21 and 28 days p.o.i. (Fig. 3c, p < 0,05). Interestingly though, we also found an increased CK-19 mRNA levels in Lgals3−/− mice at an earlier stage (15 days) p.o.i. (Fig. 3d, p < 0,05). These results suggest that Lgals3−/− mice are more permissive for 4T1 tumor cells dissemination to the inguinal lymph nodes.
    > Galectin-3-deficient bone marrow microenvironment supports more efficiently the growth of metastatic 4T1
    > We have previously described that Lgals3−/− mice presented structural and functional differences in the bone marrow [17]. Likewise, in this study we confirmed differences in terms of cellularity and projections of bone tissue inside the cavity between Balb/c Lgals3+/+ and Lgals3 −/− mice (Fig. 4a and b).

[8] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.724)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[9] Mutation of the galectin‐3 glycan‐binding domain ( Lgals3‐R200S) enhances cortical bone expansion in male mice and trabecular bone mass in female mice

  • Authors: Kevin A. Maupin, Daniel T. Dick, Vari Vivarium, Transgenics Core, B. Williams
  • Year: 2020
  • Venue: FEBS Open Bio
  • URL: https://www.semanticscholar.org/paper/6ab62ea9acc6fef617d0b1f237c1a477f45b05c7
  • DOI: 10.1002/2211-5463.13483
  • PMID: 36062328
  • PMCID: 9527582
  • Citations: 2
  • Summary: The results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3, while the cortical bone phenotypeof Lgal3- KO mice may have also been influenced by Loss of intracellular galECTin- 3.
  • Evidence snippets:
  • Snippet 1 (score: 0.714)
    > The study of galectin-3 is complicated by its ability to function both intracellularly and extracellularly. While the mechanism of galectin-3 secretion is unclear, studies have shown that the mutation of a highly conserved arginine to a serine in human galectin-3 (LGALS3-R186S) blocks glycan binding and secretion. To gain insight into the roles of extracellular and intracellular functions of galectin-3, we generated mice with the equivalent mutation (Lgals3-R200S) using CRISPR/Cas9-directed homologous recombination. Consistent with a reduction in galectin-3 secretion, we observed significantly reduced galectin-3 protein levels in the plasma of heterozygous and homozygous mutant mice. We observed a similar increased bone mass phenotype in Lgals3-R200S mutant mice at 36 weeks as we previously observed in Lgals3-KO mice with slight variation. Like Lgals3-KO mice, Lgals3-R200S females, but not males, had significantly increased trabecular bone mass. However, only male Lgals3-R200S mice showed increased cortical bone expansion, which we had previously observed in both male and female Lgals3-KO mice and only in female mice using a separate Lgals3 null allele (Lgals3). These results suggest that the trabecular bone phenotype of Lgals3-KO mice was driven primarily by loss of extracellular galectin-3. However, the cortical bone phenotype of Lgals3-KO mice may have also been influenced by loss of intracellular galectin-3. Future analyses of these mice will aid in identifying the cellular and molecular mechanisms that contribute to the Lgals3-deficient bone phenotype as well as aid in distinguishing the extracellular vs. intracellular roles of galectin-3 in various signaling pathways.

[10] Impairment of lysosomal quality control in Huntington disease

  • Authors: P. Rusmini, F. Mina, M. Valenza, Martina Vitali, V. Ferrari et al.
  • Year: 2025
  • Venue: Cell Death & Disease
  • URL: https://www.semanticscholar.org/paper/c874bbb3c9e6aa0a3f74519c022f3fa822daf4a8
  • DOI: 10.1038/s41419-025-08103-z
  • PMID: 41145409
  • PMCID: 12559425
  • Citations: 4
  • Influential citations: 1
  • Summary: TFEB and TFE3 are sequestered in muHTT aggregates, and muHTT proteins associates with LMP triggering the translocation of LGALS3 to the lumen of lysosomes, with a close relation between polyQ size and severity of these events.
  • Evidence snippets:
  • Snippet 1 (score: 0.704)
    > In HD, high levels of LGALS3 have been found in plasma and brain of patients and mice. LGALS3 upregulation was observed in HD mice before the motor symptoms, in the microglia LGALS3 was found associated to damaged lysosomes and its suppression in microglia ameliorated the HD mice phenotype [36].
    > LGALS3 is emerging as a key factor for NDs for its intracellular role in lysosomal damage, but also for its functions linked to its secretion in the extracellular space. Many pieces of evidence suggest its detrimental role in neurodegeneration, even if a protective role of LGALS3 has been reported (reviewed in ref. [75]). LGALS3 mechanisms of action need further investigation but its pharmacological modulation might represent a valuable target for intervention for NDs. LGALS3 inhibitors have already been tested in metabolic and fibrotic diseases, and these approaches might be applied to NDs. 3′-bis-(4aryltriazol-1-yl) thiodigalactoside (GB039, formerly named TD139), a synthetic small molecule that antagonizes LGALS3 activity by binding to the carbohydrate recognition domain, was effective in idiopathic pulmonary fibrosis and retinal degeneration [76,77]. Pectins, plant cell wall polysaccharides, mostly obtained from citrus and apples, represent natural LGALS3 inhibitors [78,79].
    > In summary, our experiments suggest that LQC impairment might contribute to HD. Indeed, the LGALS3 accumulation observed in HD cellular models due to TFEB and TFE3 sequestration by muHTT inclusions causes LMP and lysophagy impairment, in turn, influences LQC.
    > Fig. 8 TFEB and TFE3 sequestration affects the LQC. A, B NSC-34 cells were transfected with wt or muHTT.

[11] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.702)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

Notes

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Asta

(LGALS3-hypotheses/function-support-go-0090280/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has positive regulation of calcium ion import (GO:0090280). Gen... Asta Asta Scientific Corpus Retrieval 12 citations 2026-06-22T04:47:23.748620 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has positive regulation of calcium ion import (GO:0090280). Gen...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 12
  • Snippets retrieved: 20

Relevant Papers

[1] Identification of an Internal Gene to the Human Galectin-3 Gene with Two Different Overlapping Reading Frames That Do Not Encode Galectin-3*

  • Authors: M. Guittaut, Stéphane Charpentier, Thierry Normand, Martine Dubois, J. Raimond et al.
  • Year: 2001
  • Venue: The Journal of Biological Chemistry
  • URL: https://www.semanticscholar.org/paper/75ca62f4b6eb66b3bcdac062664da410941fdcaa
  • DOI: 10.1074/JBC.M002523200
  • PMID: 11160123
  • Citations: 37
  • Influential citations: 6
  • Summary: It is demonstrated that these transcripts arise from an internal gene embedded within LGALS3 and named galig (Galectin-3 internal gene), which appears to be tightly regulated and principally activated in leukocytes from peripheral blood.
  • Evidence snippets:
  • Snippet 1 (score: 0.733)
    > Human Rapid-Scan Gene Expression Panel was used to detect the alternative transcripts in various human tissues using RT-PCR. The primers used were designed to amplify a 923-or 629-bp fragment.
    > LGALS3 transcripts were detected as a 457-bp DNA and actin transcripts as a 640-bp DNA. PCR was performed using 0.25 ng or 2.5 ng (10ϫ) template cDNA.
    > average of other human proteins is 10 times lower. This rich content in tryptophans confers hydrophobic properties that may account for the membrane localization of the ORF2⅐EGFP protein (Fig. 6). Consistent with the mitochondrial localization of the ORF2⅐EGFP fusion protein, this sequence exhibits the common properties of mitochondrial-imported proteins such as the enrichment of arginine, leucine, and serine residues (36).
    > Tissue Specificity of galig Expression-Detection of galig transcripts in HOS cells and colon tumor cells revealed a low expression level. Based on this observation, the rationale that the appearance of galig transcripts may have resulted from a leaky transcription of a cryptic promoter rather than from an independently functioning promoter could not be excluded. Screening of several human tissues indicated clearly that galig is a tightly regulated gene whose expression is most efficient in leukocytes from peripheral blood. The low level of transcription in bone marrow indicates that galig is specifically expressed in mature forms of leukocytes. Whereas the precise quantification of galig mRNA has not been addressed in these experiments, it is clear that these transcripts are much less abundant than LGALS3 transcripts. This may not be surprising considering that LGALS3 is known to be highly expressed when activated (37,38). Indeed, the amount of LGALS3 transcripts appeared as abundant as those from actin genes. This shows a different type of regulation by the galig and LGALS3 promoters. In particular, muscle, stomach, and uterus, although expressing low levels of galig transcripts, revealed no LGALS3 transcripts, thus indicating an independent functioning of the two promoters.

[2] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.721)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.640)
    > The role of other galectins such as LGALS1 in AML biology is not clear.
    > LGALS1 may substitute for some LGALS3 functions particularly those involved in survival pathways as knock down of either LGALS1 or LGALS3 sensitized AML cells to BH3 mimetic drugs [15]. The failure of LGALS3 suppression to affect many of the RPPA identified proteins with the exception of PPP2R2A/B/C/D (Fig. 5) may reflect LGALS1 activity in these cells that may not be present in the primary AML cells. It is possible that many of the LGALS3 network proteins act to regulate LGALS3 rather than being regulated by the galectin. It is also possible that LGALS3 and some of the LGALS3 network proteins are subject to regulation by a yet unidentified common regulator(s). Further examination of the mechanism regulating the LGALS3 network is ongoing.
    > Network analysis from the data identifies a new extremely poor prognosis group based on the interaction between the LGALS3 and CD74 associated protein networks revealing potential biological pathways that may be critical in supporting AML cell survival. AML patients with both networks active are 8.5% of patients in the study (Fig. 9A) and thus this group may represent a sizeable population of AML patients. It is possible the two proteins regulate independent survival pathways that may have a synergistic effect on survival when both are active. The top ten biological processes associated with LGALS3 network include processes associated with cell metabolism (GO:0031325; GO:0032268; and GO:0032270), cell migration (GO:0030355), and response to growth factor stimulus (GO:0071363) and response to chemical stimulus (GO:0070887) (Supplemental Table 1). While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14].
  • Snippet 3 (score: 0.626)
    > Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated. Induction of PPP2R2A protein (Fig. 5) but not gene expression (Fig. 7) in THP-1 cells expressing LGALS3 shRNA suggests that LGALS3 acts directly on the PP2A subunits via a post-transcriptional mechanism in these cells. The TCGA data (Table 3) however suggests that there is a positive correlation between gene expression of LGALS3 and PPP2R2A suggesting that a common pathway may regulate the two genes. Fig. 8. Progeny clustering identified an optimal number of 4 distinct protein clusters for this ProFnGrp. Protein networks were generated and showed interactions between "core-proteins" (large nodes) and other probed proteins (small nodes) from the data set. Clustering method has been described in our previous publication (ref. [37]) and further information on these protein networks can be found on our website "Leukemia Profile Atlases", available at https://www.leukemiaatlas.org/. Progeny clustering identified one protein cluster with expression similar to that of the normal CD34+ samples which was designated as "normal-state" while three "leukemia-specific" protein patterns characterized by high expression individually of CD74, LGAL3, and a fourth state with both on. PPP2RA/B/C/D was the only LGALS3 network protein demonstrated to be directly regulated by LGALS3 in the THP-1 cells (Fig. 5). In our previous study we saw potent suppression of AKT signaling by LGALS3 inhibition, so perhaps the mechanism involves LGALS3 suppression of the AKT phosphatase [15]. However, we did not see suppression of LGALS3 affect other network proteins in the THP-1 cells (data not shown). The role of other galectins such as LGALS1 in AML biology is not clear.
  • Snippet 4 (score: 0.623)
    > While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14]. Many of the CD74 network associated biological processes involved immune regulation (Supplemental Table 3) though it is unclear if CD74 network regulates potential immune response in AML. Many of the CD74 network associated biological processes did include those involved in regulation of cell death and apoptosis (Supplemental Table 3). Of the 31 proteins correlated with CD74 expression, 19 are associated with the biological pathway regulation of cell death (GO.0010941) and 16 are associated with the biological pathway negative regulation of apoptotic process (GO.0043066). The raises the question of what the cross-talk is between the LGALS3 and CD74 networks? Gene expression analysis of CD74, CD44, and CLPP in the THP-1 LKO cells versus THP-1 cells with LGALS3 shRNA showed no or only slight changes in these genes (Fig. 7). Protein expression of CD74, CD44, and CLPP were similar in THP-1 LKO and THP-1 LGALS3 shRNA cells (data not shown). While LGALS3 supports AKT activation via RAS, CD74 would be expected to support AKT via MIF mediated signaling involving CD44 and/or CXCR4 [19][20][21][22][23][24][25][26][27]. Though the functional roles of LGALS3 and CD74 in this process are very different, each network would contribute to activation and perhaps may explain why patients with both active networks do so poorly (Fig. 9A and B). Unfortunately, CXCR4 is not represented in the RPPA panel due to lack of validated antibody. However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8).

[3] Systematic identification of potential key microRNAs and circRNAs in the dorsal root ganglia of mice with sciatic nerve injury

  • Authors: Youfen Yu, Xueru Xu, Chunshui Lin, Rongguo Liu
  • Year: 2023
  • Venue: Frontiers in Molecular Neuroscience
  • URL: https://www.semanticscholar.org/paper/bb63dc0bb6c65149c674451492fc049ff2f4ce8f
  • DOI: 10.3389/fnmol.2023.1119164
  • PMID: 36998510
  • PMCID: 10043392
  • Citations: 4
  • Summary: Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis demonstrated that these differentially expressed mRNAs and targeting miRNAs were involved in signal transduction, positive regulation of receptor-mediated endocytosis and regulation of neuronal synaptic plasticity in NeP.
  • Evidence snippets:
  • Snippet 1 (score: 0.719)
    > The metabolic processes included positive regulation of apoptotic process (GO:0043065), negative regulation of neuron death (GO:1901215), regulation of angiogenesis (GO:0045765), positive regulation of calcium ion import (GO:0090280), positive regulation of receptor-mediated endocytosis (GO:0048260), positive regulation of serotonin secretion (GO:0014064), positive regulation of chemokine production (GO:0032722), etc. For CC, almost all of the enriched terms were related to cellular metabolic processes, intracellular organelles and signal transmission, such as neuronal cell body (GO:0043025), glial cell projection (GO:0097386), neuron projection (GO:0043005), glutamatergic synapse (GO:0098978), Golgi apparatus (GO:0005794), axon cytoplasm (GO:1904115), and postsynaptic density (GO:0014069). Regarding MF, the enriched terms were almost all associated with protein binding, sequence-specific binding and ion channel activity, including chemokine receptor binding (GO:0048020), neuropeptide hormone activity (GO:0005184), calmodulin binding (GO:0005516), transcription factor activity (GO:0003700), sequence-specific DNA binding (GO:0043565), transmembrane transporter activity (GO:0022857), extracellular-glutamate-gated ion channel activity (GO:0005234), and ligand-gated ion channel activity (GO:0015276).
    > In summary, the involvement of intracellular and extracellular signaling pathways in immune, inflammatory and oxidative stress processes as well as endocrine metabolic processes may be closely related to the onset and development of NeP.
  • Snippet 2 (score: 0.675)
    > KEGG functional analysis of DEmRNAs showed the top 17 representative enrichment pathways, including the MAPK signaling pathway, calcium signaling pathway, p53 signaling pathway, HIF-1 signaling pathway, and cytokine-cytokine receptor interaction (Figure 2A; Supplementary Table S2).
    > Furthermore, we performed GO analysis of DEGs, and the enriched results were highly significant, including 131 entries enriched in biological process (BP), 36 entries in cellular component (CC) and 34 entries in molecular function (MF) (Figures 2B-D; Supplementary Table S2). For BP, DEmRNAs were mainly enriched in inflammatory and immune processes as well as endocrine metabolism processes. The inflammatory and immune processes included inflammatory response The construction of protein-protein interaction network and identification of hub genes. (GO:0006954), neutrophil chemotaxis (GO:0030593), cellular response to interleukin-1 (GO:0071347), macrophage chemotaxis (GO:0048246), cytokine-mediated signaling pathway (GO:0019221), positive regulation of tumor necrosis factor production (GO:0032760), immune system process (GO:0002376), etc. The metabolic processes included positive regulation of apoptotic process (GO:0043065), negative regulation of neuron death (GO:1901215), regulation of angiogenesis (GO:0045765), positive regulation of calcium ion import (GO:0090280), positive regulation of receptor-mediated endocytosis (GO:0048260), positive regulation of serotonin secretion (GO:0014064), positive regulation of chemokine production (GO:0032722), etc.

[4] Comparative transcriptome analysis provides clues to molecular mechanisms underlying blue-green eggshell color in the Jinding duck (Anas platyrhynchos)

  • Authors: Zhepeng Wang, Guohua Meng, Yun Bai, Ruifang Liu, Yu Du et al.
  • Year: 2017
  • Venue: BMC Genomics
  • URL: https://www.semanticscholar.org/paper/9d37ba3b57ef695a83d1039fe094ded0df9f4b38
  • DOI: 10.1186/s12864-017-4135-2
  • PMID: 28899357
  • PMCID: 5596863
  • Citations: 28
  • Summary: Given the involvement of membrane cholesterol contents, ions and ATP levels in modulating the transport activity of bile pigment transporters, the data suggest a potential association between duck BGEC and the transportActivity of the related transporter.
  • Evidence snippets:
  • Snippet 1 (score: 0.698)
    > During eggshell formation, a series of ions, including Ca 2+ , HCO 3 − , Na + , K + , H + , and Cl − participate in the mineralization process [40]. Here, a total of 13 Ca 2+ , 10 Na + , 8 K + , 5 H + , and 1 Cl − transporter and two HCO 3 − synthesis genes were identified among the candidate genes (Additional files 2, and 4). Among the 13 Ca 2+ transport genes, ATP2C2, HTP1B, PKD2, RASA3, CACNB2, TRPC1, TRPC4, and TRPV2 were further annotated as calcium ion import (GO:0070509) and positive regulation of calcium ion import (GO:0090280) (Additional file 5). These Ca 2+ import genes were almost all downregulated in the BSD groups, with the exception of HTR1B and ATP2C2 (Fig. 5). In contrast, three Ca 2+ pumps (ATP2A2, ATP2B2, and ATP2C2) were all upregulated (Fig. 5). Genes mediating Na + , K + , H + , and Cl − transport were almost all upregulated, with the exception of one Na + (PKD2) and two K + (PKD2 and KCNF1) transport genes (Fig. 5). In addition, two HCO 3 − synthesis genes (CA2 and CA8) were upregulated in the BSD groups (Fig. 5).
    > We identified a considerable number of candidate genes involved in ion transport coupled ATP hydrolysis (i.e. Ca 2+ pumps and Na + /K + exchangers) and synthesis (i.e. H + transporters).

[5] Lgals3 Promotes Calcium Oxalate Crystal Formation and Kidney Injury Through Histone Lactylation‐Mediated FGFR4 Activation

  • Authors: Zehua Ye, Yushi Sun, Songyuan Yang, Lei Li, Bojun Li et al.
  • Year: 2025
  • Venue: Advanced Science
  • URL: https://www.semanticscholar.org/paper/adbfa30b5832407d200a5eade9196d41be08050e
  • DOI: 10.1002/advs.202413937
  • PMID: 39903812
  • PMCID: 11947994
  • Citations: 18
  • Summary: Findings suggest that Lgals3 may play a key role in CaOx stone formation and kidney injury by interacting with PKM2 and promoting both H3K18la‐mediated gene transcription and activation.
  • Evidence snippets:
  • Snippet 1 (score: 0.695)
    > The incidence of kidney stones is increasing worldwide. However, the underlying mechanism of the process of kidney stone formation and the kidney damage caused are not well understood. Here, it is observed that Lgals3, a β‐galactoside‐binding protein, is significantly increased in tissues with calcium oxalate (CaOx) stones, and in both in vivo and in vitro models. Lgals3 expression is positively correlated with the deposition of CaOx crystals. Knockout of Lgals3 markedly reduces the deposition of CaOx crystal and renal fibrosis in vivo. Furthermore, Lgals3 deficiency decrease the glycolytic rate and lactate production during the process of CaOx deposition and inhibited histone lactylation of H3K18la. Mechanistic studies shows that Lgals3 directly interacted with the key glycolysis protein pyruvate kinase M2 (PKM2) and promoted its expression by modulating E3 ligase Trim21, preventing the ubiquitination of PKM2. Furthermore, H3K18 lactylation promoted CaOx crystal deposition and kidney injury in vivo and in vitro. Lgals3 deficiency inhibites the transcription, activation, and expression of FGFR4 through inhibition of H3K18la. These findings suggest that Lgals3 may play a key role in CaOx stone formation and kidney injury by interacting with PKM2 and promoting both H3K18la‐mediated gene transcription and activation.
  • Snippet 2 (score: 0.661)
    > [23] The result of the present study revealed that Lgals3 exhibited several novel functions and mechanisms in the formation of kidney stones and the development of renal fibrosis (Figure 13). It was found that Lgals3 was highly expressed in CaOx crystal deposition and stimulated the activation of glycolysis during crystal deposition and renal fibrosis. Knockout or pharmacological inhibition of Lgals3 demonstrated a significant reduction of crystal deposition and renal fibrosis. In addition, IP-MS analysis identified PKM2, a key molecule in the regulation of glycolytic function, as the direct binding target of Lgals3. Furthermore, this study integrated analyses of CUT&Tag and RNA-seq and demonstrated that Lgals3mediated histone lactylation promoted FGFR4 expression during the formation of CaOx stones and renal fibrosis. [24] Lgals3 is considered a disease-associated biomarker and it is significantly increased in cases of acute myocardial infarction or AKI. [25,26] urthermore, recent investigations have shown that it has significant potential as a therapeutic target for various inflammatory and fibrotic illnesses, including lung or kidney fibrosis. [27] n this study, it was found that Lgals3 expression was increased in both mouse and human CaOx crystal kidney tissues. This study utilized Lgals3 −/-mice and demonstrated that Lgals3 deficiency alleviated CaOx crystal deposition and renal fibrosis. The deposition of CaOx crystals and the development of renal fibrosis are complex processes regulated by numerous genes and signaling pathways. RNA-seq and 4D-DIA proteomics were performed to detect alterations in mRNA and protein expression in Lgals3-deficient cells under COM stimulation. The KEGG analysis showed that Lgals3 deficiency primarily enriched metabolicrelated pathways, specifically glycolysis. When cells are exposed to various stimuli, the mitochondrial energy metabolism undergoes alterations, leading to significant activation of glycolysis, which in turn increases the overall energy supply. [28]
  • Snippet 3 (score: 0.653)
    > To explore the role of Lgals3 in kidney injury caused by CaOx crystal, Lgals3 knockout (Lgals3 −/− ) mice were generated (Figure S3A,B, Supporting Information). qPCR, Western blot and immunohistochemistry staining were used to verify knockout efficiency (Figure S3C-E, Supporting Information). Subsequently, a CaOx kidney stone model was established (Figure 2A). CaOx crystal deposition markedly elevated blood urea nitrogen (BUN) and creatinine levels, whereas Lgals3 knockout ameliorated kidney function (Figure 2B,C). Histological assessment of kidney pathology by hematoxylin and eosin (HE) and Von Kossa staining showed that tubular injury and CaOx crystal deposition were significantly increased in the model group, whereas knockout of Lgals3 alleviated kidney injury and CaOx crystal formation (Figure 2D). Meanwhile, renal fibrotic structural alterations were evaluated, and Lgals3 knockout reduced collagen fiber deposition (Figure 2E,F). In addition, Inflammatory responses play a crucial role in the formation of calcium oxalate kidney stones. We found that CaOx crystals leads to an increase in the expression of inflammatory cytokines such as IL-1,IL-6 and TNF- (Figure S3F, Supporting Information). Conversely, the knockout of Lgals3 results in a significant decrease in the expression of these inflammatory factors.
    > To identify the role of Lgals3 in vitro, a Lgals3-knockdown HK-2 cell line was established and western blot analysis confirmed that Lgals3 knockdown was successful (Figure S4A, Supporting Information). The HK-2 cells were treated with COM for 48h to established the cell model. Immunofluorescence staining found that Lgals3 knockdown alleviated -SMA expression in COM-treated HK-2 cells (Figure S4C, Supporting Information). Western blot analysis showed a significant decrease in fibrosis-related protein expression under the stimulation of COM in vitro (Figure S4D, Supporting Information).

[6] Periplocin suppresses the growth of colorectal cancer cells by triggering LGALS3 (galectin 3)-mediated lysophagy

  • Authors: Kui Wang, Shuyue Fu, Lixia Dong, Dingyue Zhang, Mao Wang et al.
  • Year: 2023
  • Venue: Autophagy
  • URL: https://www.semanticscholar.org/paper/3dadfc351823c4e325e65c171ab3765871189c80
  • DOI: 10.1080/15548627.2023.2239042
  • PMID: 37471054
  • Citations: 35
  • Influential citations: 2
  • Summary: It is shown that periplocin exhibits promising anticancer activity against CRC both in vitro and in vivo, and is indicated as a potential therapeutic option for the treatment of CRC.
  • Evidence snippets:
  • Snippet 1 (score: 0.658)
    > We next investigated the mechanism underlying periplocinmediated lysophagy. The expression of LGALS3, a key lysophagy marker [46], was found to be upregulated following periplocin treatment as evidenced by immunofluorescent staining (Figure 2M). To this end, we presumed that periplocin-induced lysophagy might be attributable to the upregulation of LGALS3. Indeed, periplocin treatment prominently elevated the protein level of LGALS3 as evidence by immunoblotting analysis (Figure 6A). The increased protein level of LGALS3 was further confirmed in tumor xenografts from periplocin-treated mice (Figure 6B,C). However, no obvious change was observed on the mRNA level of LGALS3 in periplocin-treated cells compared with controls (Figure S6A), suggesting that transcriptional regulation was not involved in increased LGALS3 expression following periplocin treatment. Therefore, we postulated that periplocin might elevate LGALS3 by regulating protein stability. Of note, cycloheximide (CHX, a translational inhibitor) treatment led to an obvious decrease in LGALS3 protein level in control cells, but had no obvious effect on the upregulated protein level of LGALS3 in periplocin-treated cells, suggesting periplocin maintains LGALS3 stability (Figure 6D,E). In support of this, treatment with MG132 (a proteasome inhibitor) failed to further enhance the protein level of LGALS3 in response to periplocin treatment (Figure 6F,G). These data suggest that periplocin may prevent proteasomal degradation of LGALS3.
    > We therefore measured the effect of periplocin on LGALS3 ubiquitination. As shown in Figure 6H, periplocin markedly decreased the ubiquitin-conjugated level of LGALS3.
  • Snippet 2 (score: 0.651)
    > In addition, periplocin was found to stabilize the protein level of LGALS3 against thermal changes using a cellular thermal shift assay (CETSA) (Figure 6J,K), implying the binding of periplocin with LGALS3. The interaction between periplocin and LGALS3 was further confirmed by drug affinity responsive target stability (DARTS) analysis, as evidenced by a more stable property of LGALS3 protein against pronase digestion in response to periplocin treatment (Figure 6L,M). Moreover, using semiflexible docking analysis, we found that LGALS3 showed a good binding activity for periplocin, with a binding energy of −6.689 kcal/mol. Glu165, Arg162, Gly152, Gln150, Arg144, and Asn143 of LGALS3 were identified as possible sites for periplocin binding (Figure 6N,O), which required further experimental investigation. Together, these data suggest that periplocin binds and prevents ubiquitin-mediated degradation of LGALS3 in CRC cells.

[7] Lysosomal damage is a therapeutic target in Duchenne muscular dystrophy

  • Authors: Abbass Jaber, Laura Palmieri, R. Bakour, N. Bourg, A. Hong et al.
  • Year: 2025
  • Venue: Science Advances
  • URL: https://www.semanticscholar.org/paper/3265a29ad8c2d48b294017fd50b6df9188b55ecb
  • DOI: 10.1126/sciadv.adv6805
  • PMID: 41124255
  • PMCID: 12542950
  • Citations: 7
  • Summary: Lysosomal perturbations in myofibers of patients with DMD and animal models are identified, highlighting lysosomal damage as an important pathomechanism in DMD and suggesting that combining trehalose with gene therapy could enhance therapeutic efficacy.
  • Evidence snippets:
  • Snippet 1 (score: 0.642)
    > To confirm the inflammatory origin of these regions, coimmunostaining for LGALS3 and CD11b was performed on serial TA muscle cross sections (Fig. 1F). An overlay of both staining (CD11b and LGALS3) was observed between the myofibers, confirming the presence of infiltrating macrophages, while LGALS3 staining was also evident within myofibers. This indicates that the up-regulation of Gal-3 in muscle lysates reflects contributions from both immune infiltrates and myogenic sources.
    > To specifically quantify LMP in myofibers, we measured the number of LAMP2 + LGALS3 + puncta within myofibers, excluding inflammatory areas using a segmentation method (fig. S2A). This analysis revealed a significant increase in LAMP2 + LGALS3 + puncta in dystrophic muscle compared to WT controls (mean puncta = 9 for Dmd mdx-4Cv versus 1 in WT) (Fig. 1G), confirming that LGALS3 upregulation in Dmd mdx-4Cv muscles is not solely due to macrophage infiltration but also reflects myogenic up-regulation and recruitment to the lysosome, suggesting substantial LMP in dystrophic myofibers.
    > To validate these findings in human and large animal models, we analyzed muscle biopsies from patients with DMD and golden retriever muscular dystrophy (GRMD) dogs. LGALS3 up-regulation within myofibers was consistently observed in biopsies of patients with DMD from children aged 2 and nearly 4 years (Fig. 1H and fig. S2B) and in 6-month-old GRMD dogs (Fig. 1H). In all cases, LGALS3 colocalized with LAMP2 in most myofibers, further supporting the presence of LMP and myofiber-intrinsic Gal-3 up-regulation across species.

[8] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.642)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 2 (score: 0.616)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].

[9] Microarray assay of circular RNAs reveals cicRNA.7079 as a new anti-apoptotic molecule in spinal cord injury in mice.

  • Authors: Ying Yao, Jingyu Wang, T. He, Heyangzi Li, Jue Hu et al.
  • Year: 2020
  • Venue: Brain research bulletin
  • URL: https://www.semanticscholar.org/paper/8e327ffbb4c66488f7c21b3dc5f8bcd5321ffdae
  • DOI: 10.1016/j.brainresbull.2020.08.004
  • PMID: 32882320
  • Citations: 24
  • Summary: The anticipation of anti-apoptosis circRNA 7079 may provide potential research targets for SCI in mice and contribute to new insights into the mechanism of apoptosis after SCI.
  • Evidence snippets:
  • Snippet 1 (score: 0.627)
    > the expression of downstream target genes. Our current study Our current study verified that lgals3 is the downstream target of the cicRNA.7079-mmu-miR-6953-5p axis. To date, the mechanisms of the regulation of lgals3 expression in CNS were barely known. In this study, we identified a new regulatory mechanism of lgals3 expression in motor neurons. The previous study reported that lgals3 was increased on day 14 after SCI in rats' spinal cord (Chih-Yen et al., 2011). In line with that, lgals3 was increased at day 3 after SCI in mice spinal cord in our study. Lgals3, has been described as a mediator of apoptosis. The anti-apoptotic role of lgals3 has been was demonstrated in peritoneal macrophages (Hsu et al., 2000), myocardial cells (Al-Salam et al., 2020), and melanoma cells (Wang et al., 2019a). Our study provided evidence that the anti-apoptotic effect of cicRNA.7079 was mediated by mmu-miR-6953-5p -lgals3 axis in motor neurons. Lgals3 containing the anti-death Asp-Trp-Gly-Arg (NWGR) motif, plays an anti-apoptotic effect possibly through its interaction with Bcl-2 family members, Akt-1, NF kappa-B, beta-cateninn, and cathepsin D proteins (Yang et al., 1996;Al-Salam et al., 2020;Akahani et al., 1997). Therefore, the detailed mechanism by which lgals3 regulates apoptosis in motor neurons needs to be further investigated.
    > Recently, circRNA expression profile in rat spinal cord at 6 h after SCI was identified by RNA-seq finding out that 99 circRNAs were up- Fig. 6. The apoptosis-related ceRNA network analysis. The top 30 apoptosis-related circRNAs were plotted as triangles. LncRNAs were plotted as rectangles. miRNAs were plotted as V-shapes.

[10] SREBP1 regulates Lgals3 activation in response to cholesterol loading

  • Authors: Jing Li, Hongtao Shen, G. Owens, Lian‐Wang Guo
  • Year: 2022
  • Venue: Molecular Therapy. Nucleic Acids
  • URL: https://www.semanticscholar.org/paper/6c55d666855233ff0e7035d46075997924da854c
  • DOI: 10.1016/j.omtn.2022.05.028
  • PMID: 35694209
  • PMCID: 9168384
  • Citations: 13
  • Summary: Results identify a previously uncharacterized cholesterol-responsive dyad—SREBP1 and LGALS3, constituting a feedforward circuit that can be blocked by BETs inhibition in SMC phenotypic transition and potential interventional targets.
  • Evidence snippets:
  • Snippet 1 (score: 0.623)
    > Thus far, our data have shown transcriptional control of LGALS3 by SREBP1, likely in combination with BRD2. Of note, LGALS3 was initially used as a macrophage marker reciprocally regulating SREBP1 levels (Figure 5). In fact, increasing evidence in the literature supports the notion that LGALS3 is not merely a marker, but it actively participates in various cellular events while distributed broadly in intra-or extra-cellular locations of different cell types. 30 e were thus prompted to examine its possible influence on cholesterol-induced SMC phenotype. The data in Figure 7A show that LGALS3 silencing and overexpression potently mitigated and pro-moted an SMC migratory behavior, respectively, and LGALS3 knockdown without cholesterol loading appeared to be pro-apoptotic (Figure S6). These results agree with previous reports. 30,36 Consistent with SREBP1 regulation of LGALS3 (Figure 1), silencing SREBP1 reduced SMC migration as well (Figure 7B). Because cholesterol loading resulted in remarkable lipid accumulation inside SMCs (Figure 7C), we were curious as to whether this treatment had turned SMCs into an adipocyte-like phenotype, a question not previously addressed. We found that although three lipid-storage factors, SREBP1 (Figure 1), FABP4, and ACC1, were elevated after cholesterol loading, other adipogenic factors including CEBPA, PPARg, adiponectin, and ACAT2, decreased (Figure 7D). This result was confirmed by experiments with rat primary SMCs (Figure S7). Indicative of a specific role for LGALS3, its silencing significantly inhibited cholesterolinduced upregulation of SREBP1 (Figure 5), FABP4, and ACC1, albeit without a significant effect on other markers (Figure 7E). Accordingly, the effects of SREBP1 silencing on these markers largely followed the pattern that resulted from LGALS3 silencing (Figure 7F).

[11] Thyroid malignant neoplasm-associated biomarkers as targets for oncolytic virotherapy

  • Authors: Mi Guan, Yanping Ma, S. Shah, G. Romano
  • Year: 2016
  • Venue: Oncolytic Virotherapy
  • URL: https://www.semanticscholar.org/paper/9f79d851e32ad25e83c0a2d64e12919bf81a89f8
  • DOI: 10.2147/OV.S99856
  • PMID: 27579295
  • PMCID: 4996252
  • Citations: 4
  • Summary: This review focuses on the strategy of biomarkers for the production of novel TMN oncolytic therapeutics, which may improve the specificity of targeting of tumor cells and limit adverse effects in patients.
  • Evidence snippets:
  • Snippet 1 (score: 0.620)
    > The Galectin-3 (LGALS3) is a protein that is encoded by a single gene, LGALS3, located on chromosome 14, locus q21-q22. 63 The molecular weight of this protein is ∼30 kDa, and it contains a carbohydrate-recognition-binding domain of ∼130 amino acids that enable the specific binding of β-galactosides. This protein localizes to the extracellular matrix, the cytoplasm, and the nucleus. It plays a role in numerous cellular functions including cell adhesion, cell activation and chemoattraction, cell growth, differentiation, cell cycle, apoptosis, innate immunity, cell adhesion, and T-cell regulation. 63,64 It has been known that LGALS3 is distributed widely around the tissues but in a low level.
    > To date, LGALS3 has been extensively studied as an IHC marker of thyroid malignancy, and a high diagnostic accuracy has been reported even for difficult pathological diagnoses. 64 Feilchenfeldt et al reported that the mRNA levels of LGALS3 and thyroglobulin in 28 benign and 31 malignant thyroid samples were quantified by real-time PCR. The LGALS3 expression at the mRNA was 60% (12/20) and the protein level was 100% (8/8), respectively. 65 The positive rate was 84% (41/49) when combined with the LGALS3 and HBME-1 in PTC specimens. 66 Two groups of researchers have detected the LGALS3 by IHC in PTC specimens. Saleh et al have shown that the sensitivity and the specificity for LGALS3 were 92.3% and 77.3%, respectively. 67 Song et al reported that positive expression of LGALS3 was 97% (427/441) in PTC group and 51% (77/151) in the benign thyroid lesions group. 68 These results may further support the notion that the high level of LGALS3 antigen expression occurs in patients with PTC. There are a number of different types of oncolytic viruses that have been altered from natural viruses in the laboratory such as adenovirus, reovirus, measles virus, herpes simplex

[12] Extracellular Vesicles from iPSC-Derived Glial Progenitor Cells Prevent Glutamate-Induced Excitotoxicity by Stabilising Calcium Oscillations and Mitochondrial Depolarisation

  • Authors: M. Shedenkova, Anastasiia A. Gurianova, I. Krasilnikova, A. Sudina, E. Karpulevich et al.
  • Year: 2025
  • Venue: Cells
  • URL: https://www.semanticscholar.org/paper/6a7fa01a0c5294235731390acdd5215a4a803f13
  • DOI: 10.3390/cells14231915
  • PMID: 41369405
  • PMCID: 12691032
  • Citations: 1
  • Summary: The obtaining results demonstrated the improvement of neuronal survival by reducing intracellular calcium levels and stabilising mitochondrial membrane potential under glutamate-induced excitotoxicity via PI3K-Akt signalling pathway activation.
  • Evidence snippets:
  • Snippet 1 (score: 0.619)
    > The final category of identified processes involved the maintenance of intracellular homeostasis, which encompassed the following pathways: regulation of metal ion transport, positive regulation of transmembrane transport, positive regulation of secretion by cell, peptide hormone secretion, neuropeptide signalling pathway, positive regulation of ion transmembrane transporter activity, receptor recycling, and regulation of membrane depolarisation (Figure 12A).
    > Analysis of down-regulated pathways revealed significant enrichment of processes associated with neuronal physiology, including axonogenesis, regulation of cellular response to stress, dendrite development, regulation of synapse organisation, calcium ion transport, regulation of synapse structure or activity, axon guidance, neuron projection guidance, regulation of calcium ion transport, calcium ion transmembrane import into cytosol, negative regulation of epigenetic gene expression, neuron projection organisation, actin-mediated cell contraction, regulation of calcium ion transmembrane transport via high voltage-gated calcium channel, and axo-dendritic protein transport (Figure 12B).
    > For deeper functional insights, we performed KEGG pathway enrichment analysis, consistent with our previous experimental approach. Additionally, Figure 13A displays a heatmap of selected differentially expressed genes, illustrating specific expression patterns across experimental conditions. Up-regulated DEGs showed significant enrichment in several signalling pathways, including focal adhesion, PI3K-Akt signalling pathway, ECM-receptor interaction, motor proteins, phagosome, regulation of actin cytoskeleton, and glutathione metabolism (Figure 13A). Down-regulated DEGs were significantly associated with pathways, including cAMP signalling pathway, MAPK signalling pathway, calcium signalling pathway, dopaminergic synapse, cGMP-PKG signalling pathway, Ras signalling pathway, cellular senescence, Wnt signalling pathway, axon guidance, long-term potentiation, cholinergic synapse, Apelin signalling pathway, glutamatergic synapse, and GABAergic synapse (Figure 13B). Gene set enrichment analysis (GSEA) identified coordinated gene expression patterns distinguishing the glutamate (GL) and extracellular vesicle-treated (GL_EV) groups.

Notes

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Asta

(LGALS3-hypotheses/function-support-go-2001237/asta.md)
Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has negative regulation of extrinsic apoptotic signaling pathwa... Asta Asta Scientific Corpus Retrieval 15 citations 2026-06-22T04:47:30.958453 citations file

Asta Literature Retrieval: Literature evidence for LGALS3 (Homo sapiens): LGALS3 has negative regulation of extrinsic apoptotic signaling pathwa...

This report is retrieval-only and is generated directly from Asta results.

  • Papers retrieved: 15
  • Snippets retrieved: 20

Relevant Papers

[1] LGALS3 is connected to CD74 in a previously unknown protein network that is associated with poor survival in patients with AML

  • Authors: P. Ruvolo, Chenyue W. Hu, Y. Qiu, V. Ruvolo, Robin L. Go et al.
  • Year: 2019
  • Venue: EBioMedicine
  • URL: https://www.semanticscholar.org/paper/46bbdbcb4660389e13acba24499cc415d75f18e0
  • DOI: 10.1016/j.ebiom.2019.05.025
  • PMID: 31105032
  • PMCID: 6604360
  • Citations: 25
  • Influential citations: 2
  • Summary: The data suggest that the LGALS3 network and the CD74 network each support AML cell survival and the two networks may cooperate in a novel high risk AML population.
  • Evidence snippets:
  • Snippet 1 (score: 0.870)
    > LGALS3 is associated with active Fig. 7. Suppression of LGALS3 does not alter gene expression of LGALS3 network protein genes or CD74 in THP-1 cells. RNA from THP-1 transductant cells with either LKO vector control shRNA or LGALS3 shRNA was isolated, cDNA produced, and mRNA levels of ATG7, LGALS3, ITGAL, CCND3, PRKCA, PARP1, CD74, MYC, CD44, SSBP2, PPP2R2A, CLPP, and B2M were determined by qRT-PCR and levels normalized to ABL-1 as described in "Materials and methods".
    > AKT and MAPK signaling. The protein with the strongest positive correlation with LGALS3 is with ATG7, an autophagy protein that has recently been implicated in maintaining hematopoietic stem cells and serving as a survival factor in AML [46,47]. Recent studies implicate LGALS3 in regulation of autophagy via autophagasome formation, though whether the mechanism involves ATG7 is not clear [48]. Interestingly, phosphorylated PKC delta was positively correlated with LGALS3. PKC delta is viewed as a pro-stress kinase but recent studies suggest that the enzyme has pro-survival properties [49][50][51]. Kinehara and colleagues suggest that PKC delta may act in human pluripotent stem cells as part of a mechanism to regulate stem cell renewal [52]. The data also suggest a novel relationship between LGALS3 and PP2A. The negative correlation of LGALS3 expression with PPP2R2A/B/C/D could reflect LGALS3 suppression of PP2A. The PP2A isoform containing PPP2R2A dephosphorylates both AKT and PKC alpha [53]. Thus, potential suppression of the PP2A subunit by LGALS3 could account for elevated AKT and PKC alpha phosphorylation in samples where LGALS3 expression is elevated.
  • Snippet 2 (score: 0.777)
    > While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14]. Many of the CD74 network associated biological processes involved immune regulation (Supplemental Table 3) though it is unclear if CD74 network regulates potential immune response in AML. Many of the CD74 network associated biological processes did include those involved in regulation of cell death and apoptosis (Supplemental Table 3). Of the 31 proteins correlated with CD74 expression, 19 are associated with the biological pathway regulation of cell death (GO.0010941) and 16 are associated with the biological pathway negative regulation of apoptotic process (GO.0043066). The raises the question of what the cross-talk is between the LGALS3 and CD74 networks? Gene expression analysis of CD74, CD44, and CLPP in the THP-1 LKO cells versus THP-1 cells with LGALS3 shRNA showed no or only slight changes in these genes (Fig. 7). Protein expression of CD74, CD44, and CLPP were similar in THP-1 LKO and THP-1 LGALS3 shRNA cells (data not shown). While LGALS3 supports AKT activation via RAS, CD74 would be expected to support AKT via MIF mediated signaling involving CD44 and/or CXCR4 [19][20][21][22][23][24][25][26][27]. Though the functional roles of LGALS3 and CD74 in this process are very different, each network would contribute to activation and perhaps may explain why patients with both active networks do so poorly (Fig. 9A and B). Unfortunately, CXCR4 is not represented in the RPPA panel due to lack of validated antibody. However, CD44 is present and interestingly is most elevated in patients with active LGALS3 network and CD74 network (Fig. 8).
  • Snippet 3 (score: 0.755)
    > Galectin 3 (LGALS3) is a beta-galactoside binding protein that participates in diverse cellular processes that support cell growth and cell survival [1][2][3][4][5][6][7][8][9]. There are at least fourteen known galectin family members of which ten are found in mammalian cells [1]. There are three families of galectins based on structure but LGALS3 is unique in that it is the only member of the chimeric group [1]. LGALS3 is the only galectin which can form pentamers and this enables the galectin to form lattices and thus participate in endocytotic processes [1].
    > LGALS3 is an excellent example of a molecule that acts as a tumor promoter in the context of the entire tumor microenvironment by promoting survival of malignant cells, supporting metastasis, suppressing immune surveillance, and modulating inflammatory expression of chemokines/cytokines [1][2][3][4][5][6][7][8][9].
    > LGALS3 supports cell survival by diverse mechanisms. The galectin has been shown to associate with BCL2 via a NWGR motif common to both proteins to help the anti-apoptotic molecule support mitochondrial integrity during stress challenge [7][8][9]. LGALS3 also supports cell proliferation via the WNT signaling pathway. LGALS3 can bind beta Catenin and Axin and also supports beta catenin protein stability by promoting Protein Kinase B (AKT) suppression of GSK3 beta [10][11][12].
    > LGALS3 is critical for RAS signaling and thus supports Mitogen Activated Protein Kinase (MAPK) and AKT cascades [1,2,[12][13][14][15][16][17]. LGALS3 positively regulates BCL2 and MCL-1 gene and protein expression in AML cells by supporting both ERK and AKT pathways [1,2,[12][13][14][15][16][17].
  • Snippet 4 (score: 0.755)
    > LGALS3 positively regulates BCL2 and MCL-1 gene and protein expression in AML cells by supporting both ERK and AKT pathways [1,2,[12][13][14][15][16][17]. Suppression of LGALS3 by shRNA or with GCS-100 (an inhibitor of LGALS1 and LGALS3) blocks both AKT and ERK signaling pathways [15,17].
    > LGALS3 regulated pathways are involved in expression of genes and protein associated with cancer stem cells (CSC) and thus the galectin likely supports CSC [9]. Recent data suggests that LGALS3 supports malignant cell survival in AML [6,15,18]. In a cohort of Taiwanese AML patients, Cheng and colleagues reported that elevated LGALS3 mRNA was prognostic for poor survival outcome [18]. However, in that study the impact of LGALS3 protein expression or associations of the galectin with potential LGALS3 target proteins was not examined.
    > CD74 (also known as the invariant chain protein) is best known as a chaperone for major histocompatibility (MHC) Class II molecules involved in antigen presentation [19,20]. In addition to mediating MHC Class II molecule endocytosis, CD74 protects these molecules from proteolysis [19][20][21]. CD74 also has MHC Class II independent functions that involve the pro-inflammatory cytokine macrophage inhibitory factor (MIF) and cell surface signaling molecules CD44 and CXCR4 [19][20][21]. CD74 was found to bind MIF but CD74 alone is unable to initiate MIF signaling which requires either CD44 or CXCR4 [19][20][21][22][23]. CD74 dependent MIF signaling pathways include ERK, JNK, and AKT [24][25][26][27]. CD74 dependent MIF signaling has been shown to suppress p53 function and to activate NF kappa B [26,28].
  • Snippet 5 (score: 0.754)
    > The role of other galectins such as LGALS1 in AML biology is not clear.
    > LGALS1 may substitute for some LGALS3 functions particularly those involved in survival pathways as knock down of either LGALS1 or LGALS3 sensitized AML cells to BH3 mimetic drugs [15]. The failure of LGALS3 suppression to affect many of the RPPA identified proteins with the exception of PPP2R2A/B/C/D (Fig. 5) may reflect LGALS1 activity in these cells that may not be present in the primary AML cells. It is possible that many of the LGALS3 network proteins act to regulate LGALS3 rather than being regulated by the galectin. It is also possible that LGALS3 and some of the LGALS3 network proteins are subject to regulation by a yet unidentified common regulator(s). Further examination of the mechanism regulating the LGALS3 network is ongoing.
    > Network analysis from the data identifies a new extremely poor prognosis group based on the interaction between the LGALS3 and CD74 associated protein networks revealing potential biological pathways that may be critical in supporting AML cell survival. AML patients with both networks active are 8.5% of patients in the study (Fig. 9A) and thus this group may represent a sizeable population of AML patients. It is possible the two proteins regulate independent survival pathways that may have a synergistic effect on survival when both are active. The top ten biological processes associated with LGALS3 network include processes associated with cell metabolism (GO:0031325; GO:0032268; and GO:0032270), cell migration (GO:0030355), and response to growth factor stimulus (GO:0071363) and response to chemical stimulus (GO:0070887) (Supplemental Table 1). While it is unclear how LGALS3 might mechanistically influence leukemic cell recovery and growth after therapy, perhaps regulation of these cellular processes are important in addition to the well documented role of LGALS3 in regulation of cell cycle and cell proliferation [1,2,13,14].

[2] Parthenolide leads to proteomic differences in thyroid cancer cells and promotes apoptosis

  • Authors: Meng Cui, Zhe Wang, Letao Huang, Jia-He Wang
  • Year: 2022
  • Venue: BMC Complementary Medicine and Therapies
  • URL: https://www.semanticscholar.org/paper/7f36ac62e89f19c15f02a3e0b01306e4f458dd67
  • DOI: 10.1186/s12906-022-03579-0
  • PMID: 35366876
  • PMCID: 8977004
  • Citations: 11
  • Summary: Parthenolide may influence the biological behavior of human thyroid cancer cells by affecting the expression of proteins related to cell metabolism and DNA replication, leading to an anti-proliferative effect.
  • Evidence snippets:
  • Snippet 1 (score: 0.830)
    > The above experiments confirmed that PTL can induce apoptosis of BCPAP cells, and in the proteomics clustering results, 6 proteins (IL1B, ITGA6, CASP8, GCLM, HMOX1 and HSPA1A) were classified into 'negative regulation of extrinsic apoptotic signaling pathway' (GO: 2001237). After bioinformatics screening, three were selected to further verify expression differences by PRM. HMOX1 and GCLM were up-regulated and IL1B was down-regulated in BCPAP cells treated with PTL (Fig. 7).

[3] Dual RNA Sequencing Reveals Key Events When Different Giardia Life Cycle Stages Interact With Human Intestinal Epithelial Cells In Vitro

  • Authors: L. Rojas, Jana Grüttner, S. Ma'ayeh, Feifei Xu, S. Svärd
  • Year: 2022
  • Venue: Frontiers in Cellular and Infection Microbiology
  • URL: https://www.semanticscholar.org/paper/a07b7add52e16b284f33a3757df71a8f8338df7b
  • DOI: 10.3389/fcimb.2022.862211
  • PMID: 35573800
  • PMCID: 9094438
  • Citations: 12
  • Influential citations: 1
  • Summary: It is shown that different life cycle stages of Giardia induce different gene expression responses in the host cells and that the IECs in turn differentially affect the gene expression in trophozoites and early encysting cells.
  • Evidence snippets:
  • Snippet 1 (score: 0.816)
    > Studies of giardiasis patients have shown an increased number of apoptotic cells in the duodenum (Troeger et al., 2007). Recent studies of Giardia-host cell interactions using 3D stem cellenriched organoid cultures from human duodenal biopsies and WB trophozoites show induction of apoptosis after 48 h interaction (Holthaus et al., 2021). WB parasites of all life-cycle stages up-regulate pro-apoptotic and anti-apoptotic genes (Table S1). This ambiguity was first observed when Giardia WB trophozoite-Caco-2 interactions were studied using microarrays (Roxström-Lindquist et al., 2005), and it was also observed during GS trophozoite infection of Caco-2 cells (Ma'ayeh et al., 2018). Differentially transcribed apoptosis-related genes are listed in Figure S4. Both intrinsic and extrinsic apoptosis pathway genes were identified as DEGs during infection. GO term enrichment analysis showed that the regulation of apoptotic process (GO:0042981) was enriched in up-regulated DEGs during all 3 time-points from all three life cycle stages. Extrinsic apoptosis pathway genes were differentially expressed (e.g., TNFRSF10A, B, and D) and GO term enrichment showed that tumor necrosis factor-mediated signaling pathway (GO:0033209) and negative regulation of extrinsic apoptotic signaling pathway (GO:2001237) were enriched for in the DEGs. This is in line with a recent report (Liu et al., 2020b) showing that Giardia trophozoites can activate CASP3/8 signaling pathways via activation of TNFR1 and K63 deubiquitination of RIP1, which in turn is caused by up-regulation of CYLD and A20. GO term enrichment analysis also detected the term intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (GO:0070059).

[4] Microarray assay of circular RNAs reveals cicRNA.7079 as a new anti-apoptotic molecule in spinal cord injury in mice.

  • Authors: Ying Yao, Jingyu Wang, T. He, Heyangzi Li, Jue Hu et al.
  • Year: 2020
  • Venue: Brain research bulletin
  • URL: https://www.semanticscholar.org/paper/8e327ffbb4c66488f7c21b3dc5f8bcd5321ffdae
  • DOI: 10.1016/j.brainresbull.2020.08.004
  • PMID: 32882320
  • Citations: 24
  • Summary: The anticipation of anti-apoptosis circRNA 7079 may provide potential research targets for SCI in mice and contribute to new insights into the mechanism of apoptosis after SCI.
  • Evidence snippets:
  • Snippet 1 (score: 0.773)
    > the expression of downstream target genes. Our current study Our current study verified that lgals3 is the downstream target of the cicRNA.7079-mmu-miR-6953-5p axis. To date, the mechanisms of the regulation of lgals3 expression in CNS were barely known. In this study, we identified a new regulatory mechanism of lgals3 expression in motor neurons. The previous study reported that lgals3 was increased on day 14 after SCI in rats' spinal cord (Chih-Yen et al., 2011). In line with that, lgals3 was increased at day 3 after SCI in mice spinal cord in our study. Lgals3, has been described as a mediator of apoptosis. The anti-apoptotic role of lgals3 has been was demonstrated in peritoneal macrophages (Hsu et al., 2000), myocardial cells (Al-Salam et al., 2020), and melanoma cells (Wang et al., 2019a). Our study provided evidence that the anti-apoptotic effect of cicRNA.7079 was mediated by mmu-miR-6953-5p -lgals3 axis in motor neurons. Lgals3 containing the anti-death Asp-Trp-Gly-Arg (NWGR) motif, plays an anti-apoptotic effect possibly through its interaction with Bcl-2 family members, Akt-1, NF kappa-B, beta-cateninn, and cathepsin D proteins (Yang et al., 1996;Al-Salam et al., 2020;Akahani et al., 1997). Therefore, the detailed mechanism by which lgals3 regulates apoptosis in motor neurons needs to be further investigated.
    > Recently, circRNA expression profile in rat spinal cord at 6 h after SCI was identified by RNA-seq finding out that 99 circRNAs were up- Fig. 6. The apoptosis-related ceRNA network analysis. The top 30 apoptosis-related circRNAs were plotted as triangles. LncRNAs were plotted as rectangles. miRNAs were plotted as V-shapes.
  • Authors: Ziwei Xie, Yue He, Yuxin Feng, Xiaohong Wang
  • Year: 2024
  • Venue: Frontiers in Endocrinology
  • URL: https://www.semanticscholar.org/paper/a437f1ce179ac605a4b4d5733d5e488db5fbabe5
  • DOI: 10.3389/fendo.2024.1372221
  • PMID: 39149122
  • PMCID: 11324423
  • Citations: 15
  • Influential citations: 3
  • Summary: This study systematically elucidated the molecular characteristics of PCD in EM and identified TNFSF12, AP3M1, and PDK2 as key biomarkers, providing new directions for the early diagnosis and personalized treatment of EM.
  • Evidence snippets:
  • Snippet 1 (score: 0.748)
    > Functional annotation and pathway enrichment analyses were performed on the DPGs. The results of the GO enrichment analysis indicate that these genes are involved in multiple signaling pathways associated with PCD (Figure 2D). The pathways encompassed are the intrinsic apoptotic signaling pathway, regulation of apoptotic signaling pathway, regulation of autophagy, macroautophagy, intrinsic apoptotic signaling pathway triggered by DNA damage, extrinsic apoptotic signaling pathway, mitochondrial structure organization, apoptotic mitochondrial changes, negative regulation of apoptotic signaling pathway, and regulation of intrinsic apoptotic signaling pathway. The KEGG pathway enrichment analysis (Figure 2E) indicated that these genes are involved in pathways, such as lysosome, apoptosis, autophagy, and necroptosis.

[6] Identification and Characterization of Non-Coding RNAs in Thymoma

  • Authors: Guanglei Ji, R. Ren, Xichao Fang
  • Year: 2021
  • Venue: Medical Science Monitor : International Medical Journal of Experimental and Clinical Research
  • URL: https://www.semanticscholar.org/paper/e0ad5ef5a9e860f17008417de010a1dc1b91e301
  • DOI: 10.12659/MSM.929727
  • PMID: 34219124
  • PMCID: 8268976
  • Citations: 15
  • Influential citations: 2
  • Summary: A network analysis of the lncRNA-mRNA-miRNA regulation axes identified a cluster of miRNAs upregulated in thymomas, that can trigger the expression of target protein-coding genes, and lead to the disruption of several biological pathways, including the PI3K-Akt signaling pathway, FoxO signaling pathways, and HIF-1 signaling pathway.
  • Evidence snippets:
  • Snippet 1 (score: 0.740)
    > We constructed an lncRNA-mRNA-miRNA regulation network based on the gene co-expression correlation analysis between DELs, mRNAs, and DEMs identified in thymomas (Figure 7). In this network, the upregulated miRNA hsa-let-7a-3 exhibits interactions with 8 protein-coding genes (INSR, IGF1, IL10, IGF1R, ITGB3, COL5A2, ZNF322, PXDN, TGFBR1) and can increase their expressions. The majority of target genes of DELs and DEMs are enriched in several biological pathways, including the PI3K-Akt signaling pathway (P value=0.0), the FoxO signaling pathway (P value=0.0), the HIF-1 signaling pathway (P value=0.0), the proteoglycans in cancer (P value=0.01), and other cancer pathways (P value=0.01), the Supplementary Table 2 shows these details. Most target genes were associated with various GO terms, including immune response (GO: 0006955), hepatic immune response (GO: 0002384), positive regulation of DNA replication (GO: 0045740), positive regulation of cell proliferation (GO: 0008284), positive regulation of MAPK cascade (GO: 0043410), positive regulation of DNA replication (GO: 0045740), positive regulation of cell proliferation (GO: 0008284), negative regulation of extrinsic apoptotic signaling pathway (GO: 2001237), and negative regulation of apoptotic process (GO: 0043066). Supplementary Table 3 shows these details. Our network and pathway analyses show the overexpression of miRNA clusters activates the PI3K-Akt/FoxO/HIF-1/Rap-1 signaling pathway, suggesting that PI3K/Akt/HIF-1/ Rap-1 inhibitors may be therapeutic targets for thymoma patients. The hsa-let-7a family of miRNAs is thought to inhibit migration, invasion, and tumor growth by targeting the AKT2 e929727-12

[7] High LGALS3 expression induced by HCP5/hsa-miR-27b-3p correlates with poor prognosis and tumor immune infiltration in hepatocellular carcinoma

  • Authors: Yinghui Ren, Yongmei Qian, Qicheng Zhang, Xiaoping Li, Mingjiang Li et al.
  • Year: 2024
  • Venue: Cancer Cell International
  • URL: https://www.semanticscholar.org/paper/552bd37c67dea75d0c33a9a0de2acdafcf0dcf6e
  • DOI: 10.1186/s12935-024-03309-1
  • PMID: 38643145
  • PMCID: 11031979
  • Citations: 13
  • Summary: It is hypothesized that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC and the upregulation of LGALS3 via the HCP5/hsa-miR-27b-3p axis is associated with unfavorable prognosis and increased tumor immune infiltration in HCC.
  • Evidence snippets:
  • Snippet 1 (score: 0.738)
    > Hepatocellular carcinoma (HCC) is widely recognized for its unfavorable prognosis. Increasing evidence has revealed that LGALS3 has an essential function in initiating and developing several malignancies in humans. Nevertheless, thorough analysis of the expression profile, clinical prognosis, pathway prediction, and immune infiltration of LGALS3 has not been fully explored in HCC. In this study, an initial pan-cancer analysis was conducted to investigate the expression and prognosis of LGALS3. Following a comprehensive analysis, which included expression analysis and correlation analysis, noncoding RNAs that contribute to the overexpression of LGALS3 were subsequently identified. This identification was further validated using HCC clinical tissue samples. TIMER2 and GEPIA2 were employed to examine the correlation between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration in HCC. The R program was applied to analyze the expression distribution of immune score in in HCC patients with high and low LGALS3 expression. The expression profiles of immune checkpoints were also analyzed. Use R to perform GSVA analysis in order to explore potential signaling pathways. First, we conducted pan-cancer analysis for LGALS3 expression level through an in-depth analysis of public databases and found that HCC has a high LGALS3 gene and protein expression level, which were then verified in clinical HCC specimens. Meanwhile, high LGALS3 gene expression is related to malignant progression and poor prognosis of HCC. Univariate and multivariate analyses confirmed that LGALS3 could serve as an independent prognostic marker for HCC. Next, by combining comprehensive analysis and validation on HCC clinical tissue samples, we hypothesize that the HCP5/hsa-miR-27b-3p axis could serve as the most promising LGALS3 regulation mechanism in HCC. KEGG and GO analyses highlighted that the LGALS3-related genes were involved in tumor immunity. Furthermore, we detected a significant positive association between LGALS3 and HCP5 with immunological checkpoints, cell chemotaxis, and immune infiltration. In addition, high LGALS3 expression groups had significantly
  • Snippet 2 (score: 0.723)
    > To delineate the driving mechanism of LGALS3 for the malignant progression of HCC, the KEGG and GO analysis was conducted.The volcano plot and heatmap showed significantly differentially expressed genes between LGALS3 high-and low-expression groups (Figure S3A-B).The KEGG pathway analysis revealed that these LGALS3-related genes were enriched in the IL-17 signaling pathway, ECM-receptor interaction pathway, central carbon metabolism in cancer pathway, leukocyte transendothelial migration pathway and PI3K-Akt signaling pathway.Meanwhile, the GO analysis revealed that these genes were strongly associated with cell chemotaxis, leukocyte chemotaxis, regulation of leukocyte migration, as well as regulation of chemotaxis (Fig. 5A).Accumulating evidence has proven the immune system has an essential role in malignancy pathogenesis [17], and LGALS3 is closely correlated with CD163 + tumor-associated macrophages (TAM) in glioma [10].Therefore, we studied the association between LGALS3 level and the immune infiltration level in HCC.There was no statistical difference in immune cell infiltration levels over a number of LGALS3 copy numbers (Fig. 5B).Meanwhile, immune infiltration analysis revealed that expression of LGALS3 showed a significant positive association with several immune cell populations, involving CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, dendritic cell, as well as cancer-associated fibroblasts (CAFs) within HCC (Fig. 5C-E).Based on these results, we further evaluated the immune score in HCC patients with high and low LGALS3 expression.The scores of immune cells, including CD4 + T cell, CD8 + T cell, B cell, neutrophil, macrophage, and dendritic cell, were significantly higher in the high LGALS3 expression groups, as shown in Fig. 5F.Chemokines are a group of molecules that are important for the chemotaxis of immune cells [18].

[8] Pregnancy Galectinology: Insights Into a Complex Network of Glycan Binding Proteins

  • Authors: S. Blois, G. Dveksler, G. Vasta, N. Freitag, V. Blanchard et al.
  • Year: 2019
  • Venue: Frontiers in Immunology
  • URL: https://www.semanticscholar.org/paper/68fad2b87411701fa708a1f49f8b918370486857
  • DOI: 10.3389/fimmu.2019.01166
  • PMID: 31231368
  • PMCID: 6558399
  • Citations: 56
  • Influential citations: 7
  • Summary: The relevance of galectin-glycan interactions as potential therapeutic targets in pregnancy disorders is discussed and the importance of angiogenesis during decidualization and in placenta formation is discussed.
  • Evidence snippets:
  • Snippet 1 (score: 0.731)
    > Lgals3 has been implicated in the regulation of innate and adaptive immune responses, where it participates in the activation or differentiation of immune cells and contributes to phagocytic clearance of microorganisms and apoptotic cells by macrophages (117,118). Lgals3 has been reported to promote but also to inhibit T-cell apoptosis depending on whether it binds to glycoproteins on the cell surface (CD45 and CD71) or to intracellular ligands (Bcl-2) (119, 120). In the placenta, Lgals3 was detected in all trophoblastic lineages including villous cytotrophoblasts (CTB) and EVT with a reduction of Lgals3 expression observed from the VT to the trophoblastic cell columns (121). This pattern of Lgals3 expression correlates with the switch from a proliferative to a migratory trophoblast phenotype and while placental Lgals3 dysregulation has been associated with some obstetric complications including spontaneous or recurrent miscarriages, further studies are needed to understand its contribution to trophoblast biology (81,122). In addition to trophoblasts, Lgals3 is expressed by maternal decidual cells (73). While showing a different expression pattern, both Lgals1 and Lgals3 have been proposed to play a role in cell-cell and cell-matrix interactions of trophoblast during placentation (121). Studies of the importance of Lgals3 in murine pregnancy by Yang et al. indicate that Lgals3 is expressed in the luminal and glandular epithelium and that an increase in Lgals3 is required for proper embryo implantation (123). In addition, Lgals3 affects chemotaxis and morphology of endothelial cells and stimulates capillary tube formation and angiogenesis in vivo (124). Therefore, besides its proposed roles in embryo implantation, immune regulation and trophoblast-matrix interactions, Lgals3 has a potential role in placental angiogenesis.

[9] Identification of Oncosuppressing Effects of Seven Selenoproteins in Thyroid Cancer: Implications for Distinct Roles of Selenoproteins in Tumorigenesis

  • Authors: Yang Zhao, Pu Chen, Hong-jun Lv, Yuan Wu, Shu Liu et al.
  • Year: 2021
  • Venue: Unknown venue
  • URL: https://www.semanticscholar.org/paper/13df7e615ebc2fa71ed470d2f3a02f8a65b931ef
  • DOI: 10.21203/RS.3.RS-402154/V1
  • Summary: This study confirms the distinct roles of the 25 selenoproteins in thyroid cancer pathogenesis, providing useful information to uncover the currently unknown functions of seleniproteins and open up the possibility for targeted regulation of individual selenobroteins for treatment of thyroid cancer.
  • Evidence snippets:
  • Snippet 1 (score: 0.730)
    > KEGG analysis identi ed 8 pathways related to SELENOO in thyroid cancers, including hsa03013: RNA transport, hsa04668: TNF signaling pathway, hsa04550:
    > Signaling pathways regulating pluripotency of stem cells, hsa04141: Protein processing in endoplasmic reticulum, hsa04110: Cell cycle, hsa04144: Endocytosis, hsa00240: Pyrimidine metabolism, and hsa00230: Purine metabolism (Table 2).
    > With regards to SELENOV, 22 biological processes including GO:0055085 (transmembrane transport) and GO:0055114 (oxidation-reduction process) were enriched in the top 200 SELENOV-positive-correlated genes and 35 biological processes including GO: 0098609 (cell-cell adhesion), GO:0042060 (wound healing), GO: 0007155 (cell adhesion) and GO: 2001237 (negative regulation of extrinsic apoptotic signaling pathway) were enriched in the top 200 SELENOV-negatively-correlated genes by GO analysis (Table S13). The top 5 processes on each list were shown in Fig. 4F. In addition, 8 pathways including hsa04931: Insulin resistance, hsa04920: Adipocytokine signaling pathway, hsa04520: Adherens junction, hsa05205: Proteoglycans in cancer, hsa04512: ECM-receptor interaction, hsa05200: Pathways in cancer, hsa04390: Hippo signaling pathway, and hsa05412: Arrhythmogenic right ventricular cardiomyopathy (ARVC) were identi ed to be correlated with SELENOV (Table 2).

[10] Bioinformatics-Based Identification of a circRNA-miRNA-mRNA Axis in Esophageal Squamous Cell Carcinomas

  • Authors: Zhaojun Wang, Haifeng Li, Fajun Li, Xin Su, Junhang Zhang
  • Year: 2020
  • Venue: Journal of Oncology
  • URL: https://www.semanticscholar.org/paper/d2dff21c189100a75d23e26ee2a4eef452807b2d
  • DOI: 10.1155/2020/8813800
  • PMID: 33061972
  • PMCID: 7542503
  • Citations: 13
  • Influential citations: 1
  • Summary: Support is provided for the possible mechanisms of disease progression in ESCC by discovering differentially expressed nonprotein-coding RNAs and genes with potential prognostic relevance in ES CC.
  • Evidence snippets:
  • Snippet 1 (score: 0.711)
    > Genes.KEGG enrichment and GO analyses were performed for the target genes of the two DEMs (Figure 2).In the BP category, the "extrinsic apoptotic signaling pathway in absence of ligand," "negative regulation of anoikis," and "negative regulation of apoptotic process" were enriched.While "protein binding" was enriched according to the MF category, enrichment of the "nucleoplasm," "nucleus," and "cytosol" was shown in the CC category (Figure 3(b)).e KEGG pathway analysis revealed enrichment of the "focal adhesion," "estrogen signaling," "sphingolipid signaling," and "PI3K-Akt signaling" pathways (Figure 3(a)).

[11] A Network Pharmacology Approach to Understanding the Mechanisms of Action of Traditional Medicine: Rheum L. for Diabetic Kidney Disease

  • Authors: Jin Luo, C. Piao, De Jin, Li Wang, Xiaohua Zhao et al.
  • Year: 2020
  • Venue: Unknown venue
  • URL: https://www.semanticscholar.org/paper/97072294d3d8475989fea00468baf914f0e68111
  • DOI: 10.21203/rs.3.rs-76167/v1
  • Summary: A network pharmacology-based strategy was proposed to elucidate the underlying multi-component, multi-target, and multi-pathway mode of action of Rheum L. in the treatment of diabetic kidney disease using a systems pharmacology approach.
  • Evidence snippets:
  • Snippet 1 (score: 0.710)
    > The 11 biological processes were mainly involved in in ammatory response, apoptosis, brosis, and peripheral circulation. The details are shown in Fig. 7. The processes were, in the aspect of cell proliferation: positive regulation of transcription from RNA polymerase II promoter (GO:0045944), positive regulation of cell proliferation (GO:0008284), transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169), and transcription, DNA-templated (GO:0006351);in the aspect of protein metabolism: negative regulation of protein binding (GO:0032091) and positive regulation of protein binding (GO:0032092); in the aspect of in ammatory response: response to oxidative stress (GO:0006979); in the aspect of apoptosis: negative regulation of extrinsic apoptotic signaling pathway (GO:2001237); and in the aspect of peripheral circulation regulation: glucose homeostasis(GO:0042593), regulation of blood pressure(GO:0008217), and blood coagulation(GO:0007596). Based on these ve main aspects, a complex multi-path synergetic effect may be the cause of the effect of Rheum L. on DKD.

[12] Galectin-3 aggravates microglial activation and tau transmission in tauopathy

  • Authors: Jian-Jing Siew, Hui-Mei Chen, Feng‐Lan Chiu, Chia-Wei Lee, Yao-Ming Chang et al.
  • Year: 2023
  • Venue: The Journal of Clinical Investigation
  • URL: https://www.semanticscholar.org/paper/8c77eea796475aa4e26a4051432bc4d4c021d847
  • DOI: 10.1172/JCI165523
  • PMID: 37988169
  • PMCID: 10786694
  • Citations: 24
  • Influential citations: 1
  • Summary: It is shown that Gal3 was upregulated in the microglia of humans and mice with tauopathy, and is a potential therapeutic target for tauopathy.
  • Evidence snippets:
  • Snippet 1 (score: 0.710)
    > Interestingly, the 812 GAM genes shared 172 genes with the AD DAM genes (23) (Supplemental Figure 17A), including upregulated microglial activation genes (such as Clec7a, Cd68, Csf1, Apoe, and Cybb) and downregulated microglial homeostatic genes (such as P2ry12, TMEM119, Csf1r, Hexb, and Slc2a5). Collectively, GAM is a subset of microglia with several features similar to those of DAM (e.g., the enhanced inflammatory responses and protein translation processes) and some unique only to GAM (including the protein folding process, energy metabolism, transcription, and specific translation processes) (Figure 4L and Supplemental Figure 17, B-F). Additionally, we conducted a comparative analysis between GAM in Tau22 mice and the DEGs in pTau-induced iMGLs, as well as the effects of Gal3 inhibition with TD139, to explore their potential relevance for future cross-species studies. Among the identified conservation of canonical pathways, pathways such as hepatic fibrosis signaling, Rho family GTPases, neuroinflammation, integrin, and IL8 signaling, were suppressed in the presence of TD139 (Supplemental Figure 18, A and B).
    > Loss of Gal3 protects against tauopathy. To assess the importance of Gal3 in tauopathies in vivo, we crossed Tau22 mice with Gal3 knockout mice (Tau22/Lgals3 -/-, Figure 5A). The knockout of findings suggest that the Lgals3-enriched Cluster 9 may play a pivotal role in pathways associated with EVs as evidenced by the iMGL study, and may potentially contribute to the intricate interplay between microglial activity and tau transmission.
    > Because not all microglia express Lgals3, we aimed to specifically characterize the Lgals3-positive and Lgals3-negative microglia. We define Lgals3-positive microglia as cells with Lgals3 expression levels greater than or equal to 1 average log Unique Molecular Identifier (UMI) count, which serves as a reference point.

[13] Lgals3 Promotes Calcium Oxalate Crystal Formation and Kidney Injury Through Histone Lactylation‐Mediated FGFR4 Activation

  • Authors: Zehua Ye, Yushi Sun, Songyuan Yang, Lei Li, Bojun Li et al.
  • Year: 2025
  • Venue: Advanced Science
  • URL: https://www.semanticscholar.org/paper/adbfa30b5832407d200a5eade9196d41be08050e
  • DOI: 10.1002/advs.202413937
  • PMID: 39903812
  • PMCID: 11947994
  • Citations: 18
  • Summary: Findings suggest that Lgals3 may play a key role in CaOx stone formation and kidney injury by interacting with PKM2 and promoting both H3K18la‐mediated gene transcription and activation.
  • Evidence snippets:
  • Snippet 1 (score: 0.710)
    > [23] The result of the present study revealed that Lgals3 exhibited several novel functions and mechanisms in the formation of kidney stones and the development of renal fibrosis (Figure 13). It was found that Lgals3 was highly expressed in CaOx crystal deposition and stimulated the activation of glycolysis during crystal deposition and renal fibrosis. Knockout or pharmacological inhibition of Lgals3 demonstrated a significant reduction of crystal deposition and renal fibrosis. In addition, IP-MS analysis identified PKM2, a key molecule in the regulation of glycolytic function, as the direct binding target of Lgals3. Furthermore, this study integrated analyses of CUT&Tag and RNA-seq and demonstrated that Lgals3mediated histone lactylation promoted FGFR4 expression during the formation of CaOx stones and renal fibrosis. [24] Lgals3 is considered a disease-associated biomarker and it is significantly increased in cases of acute myocardial infarction or AKI. [25,26] urthermore, recent investigations have shown that it has significant potential as a therapeutic target for various inflammatory and fibrotic illnesses, including lung or kidney fibrosis. [27] n this study, it was found that Lgals3 expression was increased in both mouse and human CaOx crystal kidney tissues. This study utilized Lgals3 −/-mice and demonstrated that Lgals3 deficiency alleviated CaOx crystal deposition and renal fibrosis. The deposition of CaOx crystals and the development of renal fibrosis are complex processes regulated by numerous genes and signaling pathways. RNA-seq and 4D-DIA proteomics were performed to detect alterations in mRNA and protein expression in Lgals3-deficient cells under COM stimulation. The KEGG analysis showed that Lgals3 deficiency primarily enriched metabolicrelated pathways, specifically glycolysis. When cells are exposed to various stimuli, the mitochondrial energy metabolism undergoes alterations, leading to significant activation of glycolysis, which in turn increases the overall energy supply. [28]

[14] Characteristics of the PI3K/AKT and MAPK/ERK pathways involved in the maintenance of self-renewal in lung cancer stem-like cells

  • Authors: Jingyuan Li, Jianyu Wang, D. Xie, Qin Pei, Xue Wan et al.
  • Year: 2021
  • Venue: International Journal of Biological Sciences
  • URL: https://www.semanticscholar.org/paper/9302948464800646b146c0b29b812d6771909340
  • DOI: 10.7150/ijbs.57871
  • PMID: 33867839
  • PMCID: 8040472
  • Citations: 38
  • Influential citations: 2
  • Summary: A clinically relevant CSCs enrichment recognition model is constructed and a new insight is uncovered that PI3K/AKT and MAPK/ERK pathways as oncogenic signaling pathway and/or stem cell signaling pathway act distinctively and synergistically to regulate lung C SCs self-renewal.
  • Evidence snippets:
  • Snippet 1 (score: 0.703)
    > We firstly evaluated the enrichment relationship between the stemness score and key molecules of PI3K/AKT pathway involving PIK3CA, AKT1, mTOR and MAPK/ERK pathway involving MAP2K1, MAP2K2, MAPK1 and MAPK3 (Figure 3A-B). The KEGG enrichment analysis revealed that PI3K/AKT pathway was markedly enriched in high stemness score group (Figure 3B, P < 0.05). Moreover, we conducted GO analysis to uncover the most valuable 10 clusters of enriched sets closely associated with proliferation, differentiation, apoptosis, as well as stemness and carcinogenicity characteristics. Notably, in the high stemness score group, the PI3K/AKT was significantly enriched in the biological process categories of negative regulation of stem cell differentiation, apoptotic process involved in morphogenesis, stem cell division, etc. (Figure 3C). And the MAPK/ERK pathway was enriched in positive regulation of extrinsic apoptotic signaling pathway, intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator, negative regulation of intrinsic apoptotic signaling pathway, etc. (Figure 3D). Whereas, in the low stemness score group, PI3K/AKT pathway was enriched in regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway, regulation of mitochondrial membrane permeability involved in apoptotic process, positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway, etc. (Figure 3E). MAPK/ERK pathway was enriched in regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway, regulation of mitochondrial membrane permeability involved in apoptotic process, regulation of oxidative stress induced intrinsic apoptotic signaling pathway, etc. (Figure 3F). As for the crosstalk enrichment of these two pathways, PI3K/AKT pathway combined with MAPK/ERK pathway in high stemness score group were enriched in regulation of stem cell differentiation, negative regulation of intrinsic apoptotic signaling pathway, negative regulation of extrinsic apoptotic signaling pathway, etc. (Figure 3G).

[15] A Preliminary Study to Investigate the Genetic Background of Longevity Based on Whole-Genome Sequence Data of Two Methuselah Dogs

  • Authors: Dávid Jónás, Sára Sándor, K. Tátrai, B. Egyed, E. Kubinyi
  • Year: 2020
  • Venue: Frontiers in Genetics
  • URL: https://www.semanticscholar.org/paper/3ac24db3f845e1915648e0d3a75f2c0ff22d5ae1
  • DOI: 10.3389/fgene.2020.00315
  • PMID: 32373156
  • PMCID: 7176982
  • Citations: 6
  • Summary: A possible link between extreme longevity and the regulation of gene transcription/translation, which hypothesis should be further investigated in the future and could define an interesting direction for future research aiming to better understand longevity.
  • Evidence snippets:
  • Snippet 1 (score: 0.699)
    > Three example genes with missense mutations in protein domains as well as with some of the related GO terms are listed below:
    > 1. ENSCAFG00000003004: negative regulation of cell growth, negative regulation of apoptotic process; 2. ENSCAFG00000004892: regulation of apoptotic process, positive regulation of extrinsic apoptotic signaling pathway; 3. ENSCAFG00000019380: calcium ion transport, regulation of heart contraction, regulation of blood pressure, modulation of chemical synaptic transmission.

Notes

  • This provider combines search_papers_by_relevance with snippet_search.
  • No synthesis or second-stage model call is performed.

📚 Additional Documentation

Notes

(LGALS3-notes.md)

LGALS3 (Galectin-3, P17931) — Gene Review Notes

Summary of identity

  • Human galectin-3 / Mac-2 antigen / CBP35 / IgE-binding protein / L-29 / L-31. HGNC:6563, UniProt P17931, 250 aa, chromosome 14.
  • The only chimera-type galectin in mammals: a single C-terminal carbohydrate-recognition domain (CRD, ~residues 113–250) fused to an intrinsically disordered, proline/glycine-rich N-terminal tail (collagen-like repeats) that enables oligomerization.
  • The CRD binds β-galactosides (lactose, N-acetyllactosamine/LacNAc), structurally solved at high resolution (e.g. PDB 1A3K, 2.1 Å; UniProt RN[25] PMID:9582341).

Core molecular function: β-galactoside / carbohydrate binding + lattice formation

  • "Galactose-specific lectin which binds IgE" (UniProt FUNCTION). Cloned as a galactose-specific macrophage lectin PMID:2402511 and as a galactoside-binding lectin homologous to mouse Mac-2 [UniProt RN3 PMID:2022338].
  • Gal-3 is monomeric but achieves functional multivalency via N-terminal self-association: "galectin-3 is monomeric, and its functional multivalency therefore is somewhat of a mystery... the disordered N-terminal domain (residues ∼20-100) interacts with itself and with a part of the CRD... forming a fuzzy complex" and "galectin-3 can also undergo liquid-liquid phase separation" PMID:28893908. This is the molecular basis for lattice/agglutination.
  • Extracellular agglutination/lattice: "The mechanism through which galectin-3 agglutinates (acting as a 'bridge' to aggregate glycosylated molecules)... Our data show that its N-terminal domain (NTD) undergoes LLPS... aggregate LPS micelles. Aggregation is reversed when interactions between the LPS and the carbohydrate recognition domains are blocked by lactose" PMID:32144274. → DisProt annotated GO:0140693 molecular condensate scaffold activity from these two papers.
  • Polysaccharide binding to NT: a novel binding site within the N-terminal tail in addition to two CRD sites PMID:28973299. → supports GO:0030246 carbohydrate binding EXP DisProt.

This carbohydrate-binding + lattice-forming activity is the CORE function; nearly all downstream biology (adhesion, immune modulation, chemoattraction, apoptosis regulation) is mediated by cross-linking glycoconjugates.

Localization (intracellular + extracellular)

  • UniProt SUBCELLULAR LOCATION: Cytoplasm; Nucleus; Secreted (non-classical). Nuclear and cytoplasmic well-supported experimentally [PMID:7682704 nucleus IDA; PMID:14961764, PMID:22761016].
  • Secreted by a non-classical (leaderless) pathway facilitated by cargo receptor TMED10 → translocation cytoplasm→ERGIC→secretion [UniProt; PMID:32272059].
  • Acts both intracellularly and at the cell surface/ECM. Many HDA proteomics annotations place it in extracellular exosome/ECM/extracellular region — consistent with abundant secretion, but these are localization-by-detection (mass spec) not function.
  • Nuclear role as pre-mRNA splicing factor (UniProt FUNCTION; spliceosomal complex keyword); RNA binding HDA from mRNA interactome PMID:22658674.

Damaged-endomembrane sensing / autophagy (lysophagy)

  • "Together with TRIM16, coordinates the recognition of membrane damage with mobilization of the core autophagy regulators ATG16L1 and BECN1 in response to damaged endomembranes" [UniProt FUNCTION; PMID:27693506]. Gal-3 detects exposed luminal glycans on ruptured endo/lysosomal membranes and recruits autophagy machinery (a glycan-sensing function). Important, increasingly recognized intracellular role.

Immune / inflammatory roles (downstream, pleiotropic)

  • Chemoattractant for monocytes/macrophages: "galectin-3 is a novel chemoattractant for monocytes and macrophages... mediated at least in part through a PTX-sensitive (G protein-coupled) pathway"; blocked by lactose PMID:10925302. This one paper underpins many BHF-UCL IDA annotations (monocyte/eosinophil/macrophage/neutrophil chemotaxis, positive chemotaxis, mononuclear cell migration, Ca2+ influx, chemoattractant activity).
  • T-cell modulation: overexpression increases T-cell growth and confers resistance to apoptosis (Bcl-2-like NWGR motif, interacts with Bcl-2) PMID:8692888. Underpins regulation of T cell proliferation (IMP) and regulation of T cell apoptotic process / extrinsic apoptotic signaling.
  • Negatively regulates TCR signaling at the immunological synapse, reduces TCR clustering, drives endocytosis-related changes PMID:19706535. Underpins immunological synapse localization (IDA) and the human IDA negative-regulation-of-endocytosis annotation; the ISS T-cell terms are transferred from mouse ortholog P16110.
  • Acts as a soluble inhibitory ligand of NKp30/NCR3, blocking B7-H6–NKp30 activation → inhibits NK / NKT / ILC2 activation [PMID:25315772 tumor escape; PMID:26582946 ILC2/NKp30, where Gal-3 = "an inhibitory ligand"]. Underpins receptor ligand inhibitor activity (GO:0141069 IDA) and negative regulation of NK T cell activation.
  • Anti-apoptotic in tumor cells; EGF downregulates cytoplasmic Gal-3 to permit apoptosis PMID:22761016 → negative regulation of extrinsic apoptotic signaling pathway (IDA).
  • NOT annotation: Gal-3 does NOT positively regulate dendritic cell differentiation [PMID:16116184 — this paper is about galectin-9 inducing DC maturation; the NOT|involved_in for Gal-3 reflects that Gal-3 lacks this activity]. Keep negated annotation.

Glycosylation / lattice at the cell surface (mechanistic exemplar)

  • β1,6-GlcNAc-branched N-glycans (GnT-V products) on receptors are recognized by Gal-3, retaining them at the surface and modulating their function: "GnT-V overexpression enhances galectin-3's cell-surface retention and promotes PTPRT's dimerization mediated by galectin-3" PMID:24846175. Underpins protein phosphatase binding (IPI, PTPRT/O14522), positive regulation of protein localization to plasma membrane, positive regulation of protein-containing complex assembly. The "protein phosphatase inhibitor activity" (GO:0004864 IDA) is indirect (it promotes PTPRT dimerization which lowers PTPRT activity) — this is a glycan-lattice effect, not a direct enzyme-inhibitor MF; flag as over-annotation/keep-non-core.

Interactions ("protein binding", GO:0005515)

~25 GO:0005515 IPI annotations, mostly from high-throughput interactome screens (PMID:25416956, 28514442, 31515488, 32296183, 33961781, 40205054) or single-partner IPI (MMP7 PMID:20812334 — MMP7 cleaves Gal-3; CD6/ALCAM PMID:24945728; CHI3L1/IL13RA2 PMID:29427412; endoglin/ENG PMID:31540324; MICA PMID:21712812; SARS-CoV-2 spike PMID:32915505; F1F0-ATP synthase ATP5B PMID:19016746). Generic "protein binding" is uninformative per curation guidelines — mark as over-annotated; the informative MF is carbohydrate/galactoside binding (many of these are glycan-dependent contacts). Do NOT remove (experimental IPI), but down-grade to over-annotated.

Verdict logic applied

  • CORE: carbohydrate binding (GO:0030246), galactoside binding (GO:0016936), molecular condensate scaffold activity / lattice (GO:0140693), and the glycan-sensing endomembrane-damage role.
  • Generic GO:0005515 protein binding → MARK_AS_OVER_ANNOTATED (uninformative).
  • HDA proteomics localizations (exosome, ECM, membrane, mitochondrial inner membrane, extracellular region) → mostly KEEP_AS_NON_CORE; the mitochondrial inner membrane IDA (PMID:19016746) is a single ATP-synthase-interaction study, treat as non-core/over-annotated.
  • Immune/chemotaxis/apoptosis BP terms → KEEP_AS_NON_CORE (real but pleiotropic, downstream of lattice function).
  • IBA, IDA core lectin & nucleus/cytoplasm localizations → ACCEPT.
  • Redundant IEA/IBA that duplicate experimental annotations → ACCEPT or KEEP_AS_NON_CORE.
  • ARBA IEA broad T-cell process terms (GO_REF:0000117) → KEEP_AS_NON_CORE (real but transferred/pleiotropic).
  • GO:0048018 receptor ligand activity (ARBA IEA) → the better-supported MF is the inhibitory-ligand activity (GO:0141069, IDA); generic receptor ligand activity is borderline — MARK_AS_OVER_ANNOTATED in favor of the specific IDA term.

GO terms verified for core_functions (hard-validated, MF/BP/CC branch)

  • GO:0030246 carbohydrate binding — MF (in GOA already)
  • GO:0016936 galactoside binding — MF (QuickGO verified, def "Binding to a glycoside in which the sugar group is galactose")
  • GO:0140693 molecular condensate scaffold activity — MF (in GOA, DisProt)
  • GO:0061684 (chaperone-mediated autophagy? no) — not used
  • locations: GO:0005634 nucleus, GO:0005737 cytoplasm, GO:0005576 extracellular region, GO:0009986 cell surface, GO:0031012 extracellular matrix (all CC, in GOA)
  • BP: GO:0061709 (reticulophagy? no). Endomembrane damage response — GO:0061912 selective autophagy? Will use GO:0007165 sparingly. For lattice/adhesion will keep BP minimal.

Falcon integration (2026-06-21)

Integrated the FutureHouse Falcon deep-research report (LGALS3-deep-research-falcon.md, 23 citations)
into the existing, already-complete review. Conservative enrichment only — no action flips on the
105 reviewed annotations.

References added (resolved to PMID via NCBI ID converter, fetched with fetch-pmid, full text cached)

  • PMID:32521192 — Jia et al. 2020, Autophagy, "MERIT, a cellular system coordinating lysosomal
    repair, removal and replacement" (DOI 10.1080/15548627.2020.1779451; Falcon key jia2020meritacellular).
    HIGH/VERIFIED. Landmark lysophagy paper. Verbatim: PMID:32521192
  • PMID:34612142 — Burbidge et al. 2022, Autophagy, "LGALS3 (galectin 3) mediates an unconventional
    secretion of SNCA/α-synuclein…" (DOI 10.1080/15548627.2021.1967615; Falcon burbidge2022lgals3(galectin3)).
    HIGH/VERIFIED. Verbatim: PMID:34612142
  • PMID:41194217 — Liu et al. 2025, Biol Direct, "Galectin-3 directs mitophagy…" (DOI
    10.1186/s13062-025-00692-1; Falcon liu2025galectin3directsmitophagy). MEDIUM/VERIFIED. Ties LLPS to
    intracellular organelle QC. Verbatim: PMID:41194217.

Note: Falcon also cites the TMED10 secretion paper (zhang2020atranslocationpathway, Cell 2020); this is the
SAME paper already in the review as PMID:32272059 (the title there reads "A Translocation Pathway for
Vesicle-Mediated Unconventional Protein Secretion"). Not re-added.

Annotation / core_function enrichment

  • Added a NEW existing_annotation GO:0062093 lysophagy (involved_in, IDA, PMID:32521192), with
    supporting_text from Jia 2020 and a second verbatim quote on glycan-recognition being required to
    initiate autophagy. This captures the damaged-endomembrane glycan-sensing → ESCRT repair →
    TRIM16-dependent lysophagy role, which was previously only in description and proposed_new_terms
    but absent from GOA/existing_annotations. GO:0062093 verified via QuickGO ("the selective autophagy
    process in which a damaged lysosome is degraded by macroautophagy").
  • Strengthened core_function GO:0140693 (molecular condensate scaffold activity) with the Liu 2025
    verbatim quote showing LLPS-disrupting mutations abolish galectin-3 mitophagy — direct functional
    evidence that the LLPS/condensate activity drives intracellular organelle quality control.
  • Strengthened the proposed_new_terms "damaged endomembrane glycan sensor activity" with the Jia 2020
    verbatim "detects membrane damage by detecting exposed lumenal glycosyl groups" (previously only a weak
    title-fragment quote from PMID:27693506).

Falcon claims NOT integrated (with reasons)

  • Pyroptosis: Falcon explicitly argues galectin-8 (not galectin-3) couples endomembrane damage to
    noncanonical inflammasome/pyroptosis (shivcharan2025). The existing review already contains no LGALS3
    pyroptosis annotation, so nothing to add or change — consistent with Falcon's caution.
  • Direct synaptic remodeling / Lewy-body localization: Falcon flags both as over-extensions (indirect
    / pathology-specific). No such annotations exist in the review; not added (would be over-annotation).
  • Integrin (αvβ1/αvβ5/αvβ6) and TGFβRII binding in fibrosis (calver2024): real but context-specific
    fibrosis mechanism. Not added as a new annotation — would be generic "protein binding"/context-specific
    signaling that the review already deliberately down-weights; left for the notes only.
  • Mitophagy as an existing_annotation: kept the Liu 2025 paper as a reference and folded its LLPS
    evidence into the condensate-scaffold core_function, but did NOT add a standalone mitophagy
    existing_annotation — it is emerging/single-study and more context-specific than lysosomal lysophagy,
    per Falcon's own "moderate / emerging" grading.
  • Falcon's cancer/heart-failure review citations (radziejewska2023, zaborska2023, tan2021, lozinski2024,
    mukherjee2025, zhang2025) are secondary reviews restating known lectin/lattice biology already covered
    by primary citations in the review; not added as top-level references.

2026-06-22 — asta IBA-support sift (manual)

Ran just gene-iba-support-research asta human LGALS3 over the 15 IBA annotations that lacked
independent literature support (outputs in LGALS3-hypotheses/function-support-*/asta.md). asta
(Semantic Scholar relevance + snippet retrieval) returned 11–16 papers per term with verbatim
snippets, PMIDs/DOIs and scores. I manually sifted every report.

Outcome: no supported_by added from this pass. None of asta's candidates are adequate,
term-specific primary evidence for the GO term in question. The hits fall into three
false-positive classes:

  1. Frequency bias toward recent disease papers. The same modern cancer/disease studies recur
    across many unrelated terms (HCC prognosis PMID:38643145; periplocin/CRC lysophagy PMID:37471054;
    glioma prognosis PMID:32528967), surfaced because they use the symbol "LGALS3" plus a process word,
    not because they assay that function.
  2. Review / family-level statements, not primary, gene-specific evidence (e.g. Liu & Rabinovich
    2010 PMID:20146714 "Galectins, beta-galactoside-binding animal lectins"; Pregnancy Galectinology
    review PMID:31231368). True but family-level orientation only.
  3. Right gene, wrong specific process. PMID:35230372 is "Macrophages secrete … galectin-3 to
    regulate neutrophil degranulation after myocardial infarction" — asta's snippet paraphrased it
    as neutrophil "migration", but the paper assays degranulation, so it does not support
    GO:0030593 neutrophil chemotaxis. (This is the receptor/process-mismatch trap to watch for.)

Crucially, asta failed to surface the foundational primary literature that actually established
these galectin-3 functions — e.g. galectin-3 as a monocyte/macrophage chemoattractant (Sano et al.
2000), the εBP/IgE-binding-protein biochemistry, and Mac-2/laminin binding. No laminin-, IgE/εBP-,
or chemoattractant-titled primary paper appeared in any report; the only "disaccharide binding" hit
was an incidental bone-phenotype study (PMID:36062328).

Tuning leverage for next runs (the query is the prompt, truncated to ~500 chars, so wording
matters): include legacy synonyms (galectin-3, Mac-2, εBP) alongside LGALS3, and consider
asta date/citation params — the relevance model here skews to recent, highly-cited genomics-era
papers and misses pre-2005 foundational biochemistry. For a well-studied gene like LGALS3, a targeted
classic-literature lookup is more productive than asta; asta's recall value is likely higher for
poorly-studied genes.

2026-06-22 — manual PubMed curation of IBA support

Followed the rule: first check whether the deep-research (asta) report already surfaced the right
paper; if not, iterate manually; if so, curate the snippet.
The asta report surfaced the correct
foundational paper in 0 of 11 checked functions, so all support below was found by manual PubMed
(NCBI E-utilities) search and verified verbatim against the fetched abstract in publications/.

Added supported_by to 12 of 15 IBA annotations:

Term GO Reference Note
monocyte chemotaxis GO:0002548 PMID:10925302 (Sano 2000) galectin-3 induces monocyte migration, chemotactic
macrophage chemotaxis GO:0048246 PMID:10925302 "chemoattractant for monocytes and macrophages"
positive chemotaxis GO:0050918 PMID:10925302 parent of the above
positive regulation of calcium ion import GO:0090280 PMID:10925302 "galectin-3 caused a Ca2+ influx in monocytes" (same paper)
laminin binding GO:0043236 PMID:2332426 (Woo 1990) Mac-2 = laminin-binding protein = galectin-3
disaccharide binding GO:0048030 PMID:11434930 ITC of galactose/poly-LacNAc binding; lactose/LacNAc are the disaccharide ligands
IgE binding GO:0019863 PMID:8347574 εBP (=Mac-2=galectin-3) "by virtue of its affinity for IgE"; ortholog (rat εBP) evidence, acceptable for an IBA
nucleus GO:0005634 PMID:12070075 galectin-3 in nuclear/cytoplasmic SMN complex; pre-mRNA splicing factor
cytoplasm GO:0005737 PMID:12070075 nucleocytoplasmic shuttling
immunological synapse GO:0001772 PMID:19706535 "recruited to the cytoplasmic side of the immunological synapse"
eosinophil chemotaxis GO:0048245 PMID:23576987 Gal-3−/− mice show decreased airway eosinophil recruitment
neutrophil chemotaxis GO:0030593 PMID:11823514 galectin-3 promotes neutrophil extravasation/recruitment (mechanism is adhesion-mediated transmigration, not a soluble chemoattractant gradient — supporting, not definitive, for the chemotaxis term)

Not curated (3) — left honestly unsupported:

  • GO:0031012 extracellular matrix — galectin-3 is clearly secreted/extracellular, but I did not
    find a clean primary statement that it localises to the extracellular matrix specifically (vs
    extracellular fluids / cell surface). Needs a dedicated ECM-deposition paper.
  • GO:0045806 negative regulation of endocytosis — the galectin-lattice-restricts-receptor-
    endocytosis concept (Partridge/Dennis 2004; Lajoie 2007) is plausible but no clean primary paper
    surfaced in a quick search; not added.
  • GO:2001237 negative regulation of extrinsic apoptotic signaling pathway — galectin-3 is broadly
    anti-apoptotic (intracellular, NWGR/BH1 motif), but a paper tying it specifically to the extrinsic
    (death-receptor) pathway was not located in a quick search; not added.

Net: manual PubMed cleanly recovered the foundational literature (Sano 2000, Woo 1990, the εBP/IgE
papers, the shuttling papers) that asta entirely missed — reinforcing the deprecation recommendation
(issue #1599).

📄 View Raw YAML

id: P17931
gene_symbol: LGALS3
product_type: PROTEIN
status: DRAFT
taxon:
  id: NCBITaxon:9606
  label: Homo sapiens
description: |-
  Galectin-3 (Mac-2, CBP35, IgE-binding protein) is the only chimera-type member of the
  galectin family of beta-galactoside-binding lectins. It comprises a single C-terminal
  carbohydrate-recognition domain (CRD), which binds beta-galactosides such as lactose and
  N-acetyllactosamine (LacNAc), joined to an intrinsically disordered, proline/glycine-rich
  N-terminal tail. Although the protein is monomeric, the N-terminal tail mediates
  concentration-dependent self-association and liquid-liquid phase separation, giving
  galectin-3 functional multivalency so that it cross-links glycoconjugates into ordered
  lattices and agglutinates glycosylated cells and particles. Galectin-3 acts both
  intracellularly and extracellularly. Inside the cell it is found in the cytoplasm and
  nucleus (where it has been implicated as a pre-mRNA splicing factor and RNA-binding
  protein) and, together with TRIM16, it senses ruptured endo/lysosomal membranes by
  recognizing newly exposed luminal glycans and helps mobilize the autophagy machinery. It
  reaches the cell surface and extracellular space through a non-classical, TMED10-facilitated
  secretory route. Extracellularly it modulates cell adhesion, cross-links cell-surface
  glycoproteins (including branched N-glycans generated by GnT-V), acts as a chemoattractant
  for monocytes and macrophages, regulates T-cell, NK-cell and innate-lymphoid-cell activation
  and apoptosis, and contributes to inflammation, fibrosis and tumor biology. Its
  high-resolution CRD structure and beta-galactoside specificity make it a prominent drug
  target.
references:
- id: GO_REF:0000024
  title: Manual transfer of experimentally-verified manual GO annotation data to orthologs
    by curator judgment of sequence similarity
  findings: []
- id: GO_REF:0000033
  title: Annotation inferences using phylogenetic trees
  findings: []
- id: GO_REF:0000044
  title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location
    vocabulary mapping, accompanied by conservative changes to GO terms applied by
    UniProt
  findings: []
- id: GO_REF:0000052
  title: Gene Ontology annotation based on curation of immunofluorescence data
  findings: []
- id: GO_REF:0000108
  title: Automatic assignment of GO terms using logical inference, based on on inter-ontology
    links
  findings: []
- id: GO_REF:0000117
  title: Electronic Gene Ontology annotations created by ARBA machine learning models
  findings: []
- id: GO_REF:0000120
  title: Combined Automated Annotation using Multiple IEA Methods
  findings: []
- id: PMID:10925302
  title: Human galectin-3 is a novel chemoattractant for monocytes and macrophages.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: PubMed-verified primary paper; underpins the BHF-UCL chemotaxis/migration
      IDA annotations. Shows galectin-3 chemoattracts monocytes/macrophages, blocked by lactose,
      via a PTX-sensitive pathway - i.e. a downstream consequence of its lectin/lattice activity.
- id: PMID:14961764
  title: Nucling mediates apoptosis by inhibiting expression of galectin-3 through
    interference with nuclear factor kappaB signalling.
  findings: []
- id: PMID:16116184
  title: Galectin-9 induces maturation of human monocyte-derived dendritic cells.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: This paper is about galectin-9, not galectin-3; it grounds a NOT annotation
      indicating galectin-3 does not promote dendritic cell differentiation.
- id: PMID:19016746
  title: Identification of mitochondrial F(1)F(0)-ATP synthase interacting with galectin-3
    in colon cancer cells.
  findings: []
- id: PMID:19056867
  title: Large-scale proteomics and phosphoproteomics of urinary exosomes.
  findings: []
- id: PMID:19199708
  title: Proteomic analysis of human parotid gland exosomes by multidimensional protein
    identification technology (MudPIT).
  findings: []
- id: PMID:19706535
  title: Galectin-3 negatively regulates TCR-mediated CD4+ T-cell activation at the
    immunological synapse.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: PubMed-verified; supports immunological synapse localization and negative
      regulation of TCR signaling / endocytosis. The ISS T-cell terms are transferred from
      mouse ortholog (P16110) using this paper.
- id: PMID:19946888
  title: Defining the membrane proteome of NK cells.
  findings: []
- id: PMID:20551380
  title: Proteomics characterization of extracellular space components in the human
    aorta.
  findings: []
- id: PMID:20812334
  title: Matrilysin-1 (MMP7) cleaves galectin-3 and inhibits wound healing in intestinal
    epithelial cells.
  findings: []
- id: PMID:21492153
  title: Analysis of proteomic changes induced upon cellular differentiation of the
    human intestinal cell line Caco-2.
  findings: []
  reference_review:
    relevance: LOW
    correctness: VERIFIED
    review_notes: Proteomic differentiation study of Caco-2 cells; correlative IEP evidence
      for an association with epithelial cell differentiation, not a direct functional assay.
- id: PMID:21712812
  title: A novel strategy for evasion of NK cell immunity by tumours expressing core2
    O-glycans.
  findings: []
- id: PMID:2261464
  title: 'Human IgE-binding protein: a soluble lectin exhibiting a highly conserved
    interspecies sequence and differential recognition of IgE glycoforms.'
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Original cloning/characterization establishing galectin-3 as a soluble
      lectin that binds IgE glycoforms.
- id: PMID:22658674
  title: Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
  findings: []
- id: PMID:22664934
  title: Comparison of tear protein levels in breast cancer patients and healthy controls
    using a de novo proteomic approach.
  findings: []
- id: PMID:22761016
  title: Downregulation of galectin-3 by EGF mediates the apoptosis of HepG2 cells.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Supports an anti-apoptotic role of cytoplasmic galectin-3 in tumor cells
      and its nuclear/cytoplasmic localization.
- id: PMID:23533145
  title: In-depth proteomic analyses of exosomes isolated from expressed prostatic
    secretions in urine.
  findings: []
- id: PMID:23580065
  title: Shotgun proteomics reveals specific modulated protein patterns in tears of
    patients with primary open angle glaucoma naïve to therapy.
  findings: []
- id: PMID:2402511
  title: Molecular cloning of a human macrophage lectin specific for galactose.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Original cloning of galectin-3 as a galactose-specific macrophage lectin;
      supports laminin binding and the core galactoside-binding identity.
- id: PMID:24846175
  title: β1,6 GlcNAc branches-modified PTPRT attenuates its activity and promotes
    cell migration by STAT3 pathway.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Shows galectin-3 binds branched N-glycans on PTPRT and promotes its
      dimerization, indirectly reducing phosphatase activity - a glycan-lattice effect, not a
      direct enzyme-inhibitor molecular function.
- id: PMID:24945728
  title: Modulation of CD6 function through interaction with Galectin-1 and -3.
  findings: []
- id: PMID:25037231
  title: Extracellular matrix signatures of human primary metastatic colon cancers
    and their metastases to liver.
  findings: []
- id: PMID:25315772
  title: Tumor-released Galectin-3, a soluble inhibitory ligand of human NKp30, plays
    an important role in tumor escape from NK cell attack.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Establishes galectin-3 as a soluble inhibitory ligand of NKp30 (NCR3),
      supporting receptor ligand inhibitor activity and negative regulation of NK/NKT activation.
- id: PMID:25416956
  title: A proteome-scale map of the human interactome network.
  findings: []
- id: PMID:26582946
  title: Group 2 Innate Lymphoid Cells Express Functional NKp30 Receptor Inducing
    Type 2 Cytokine Production.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Galectin-3 acts as an inhibitory ligand blocking NKp30-B7-H6 activation of
      ILC2; supports receptor ligand inhibitor activity and the negative-regulation immune terms.
- id: PMID:27068509
  title: 'Extracellular matrix remodelling in response to venous hypertension: proteomics
    of human varicose veins.'
  findings: []
- id: PMID:27559042
  title: Glycoproteomics Reveals Decorin Peptides With Anti-Myostatin Activity in
    Human Atrial Fibrillation.
  findings: []
- id: PMID:27693506
  title: TRIMs and Galectins Globally Cooperate and TRIM16 and Galectin-3 Co-direct
    Autophagy in Endomembrane Damage Homeostasis.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available. Establishes galectin-3 + TRIM16 cooperation in sensing
      damaged endomembranes and directing autophagy - a key intracellular glycan-sensing function.
- id: PMID:28327460
  title: Comprehensive proteomic characterization of stem cell-derived extracellular
    matrices.
  findings: []
- id: PMID:28514442
  title: Architecture of the human interactome defines protein communities and disease
    networks.
  findings: []
- id: PMID:28675934
  title: Characterization of the Extracellular Matrix of Normal and Diseased Tissues
    Using Proteomics.
  findings: []
- id: PMID:28893908
  title: The intrinsically disordered N-terminal domain of galectin-3 dynamically
    mediates multisite self-association of the protein through fuzzy interactions.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available. Mechanistic basis for galectin-3 multivalency - the
      disordered N-terminal tail self-associates and drives liquid-liquid phase separation.
- id: PMID:28973299
  title: Novel polysaccharide binding to the N-terminal tail of galectin-3 is likely
    modulated by proline isomerization.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available. NMR mapping of carbohydrate binding sites including a
      novel site in the N-terminal tail; supports carbohydrate binding (EXP, DisProt).
- id: PMID:29427412
  title: Galectin-3 Interacts with the CHI3L1 Axis and Contributes to Hermansky-Pudlak
    Syndrome Lung Disease.
  findings: []
- id: PMID:31515488
  title: Extensive disruption of protein interactions by genetic variants across the
    allele frequency spectrum in human populations.
  findings: []
- id: PMID:31540324
  title: Endoglin Protein Interactome Profiling Identifies TRIM21 and Galectin-3 as
    New Binding Partners.
  findings: []
- id: PMID:32144274
  title: Liquid-liquid phase separation and extracellular multivalent interactions
    in the tale of galectin-3.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available. Shows the N-terminal domain drives LLPS and that this
      explains galectin-3's extracellular agglutination/bridging of glycosylated molecules.
- id: PMID:32272059
  title: A Translocation Pathway for Vesicle-Mediated Unconventional Protein Secretion.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Establishes the TMED10-facilitated non-classical secretion route for
      galectin-3 (cytoplasm to ERGIC to extracellular); supports cytoplasm and extracellular
      region localization.
- id: PMID:32296183
  title: A reference map of the human binary protein interactome.
  findings: []
- id: PMID:32521192
  title: MERIT, a cellular system coordinating lysosomal repair, removal and replacement.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available (PMC). Landmark study establishing that cytosolic
      LGALS3/galectin-3 detects lysosomal membrane damage by binding exposed luminal
      glycans, then recruits/organizes ESCRT components (PDCD6IP/ALIX, CHMP4A, CHMPB)
      for membrane repair and, at later stages, cooperates with TRIM16 to drive
      autophagic removal (lysophagy) of damaged lysosomes. Directly supports the
      damaged-endomembrane glycan-sensing role and the new lysophagy annotation.
- id: PMID:32915505
  title: Structural Characterization of N-Linked Glycans in the Receptor Binding Domain
    of the SARS-CoV-2 Spike Protein and their Interactions with Human Lectins.
  findings: []
- id: PMID:33961781
  title: Dual proteome-scale networks reveal cell-specific remodeling of the human
    interactome.
  findings: []
- id: PMID:34612142
  title: LGALS3 (galectin 3) mediates an unconventional secretion of SNCA/α-synuclein
    in response to lysosomal membrane damage by the autophagic-lysosomal pathway in
    human midbrain dopamine neurons.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Full text available (PMC). Shows LGALS3 senses lysosomal membrane
      damage and mediates TRIM16/ATG16L1-dependent autophagic (unconventional)
      secretion of SNCA/alpha-synuclein in human midbrain dopamine neurons, linking
      the galectin-3 damaged-endomembrane sensing role to secretory autophagy and
      cell-to-cell propagation of pathological alpha-synuclein. Context-specific
      neuronal disease mechanism downstream of the core glycan-sensing function.
- id: PMID:40205054
  title: Multimodal cell maps as a foundation for structural and functional genomics.
  findings: []
- id: PMID:41194217
  title: Galectin-3 directs mitophagy in response to Parkin-/proteasome-dependent
    rupture of mitochondrial outer membrane.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Full text available (PMC). Proteomic study showing galectin-3 is
      enriched on the ruptured outer membrane of damaged mitochondria, relocalizes
      from the cytosol to enclose them, interacts with PHB2 and recruits ULK1 to
      drive PINK1/Parkin mitophagy. Critically, residue mutations that abolish
      galectin-3 liquid-liquid phase separation (LLPS) abrogate its mitochondrial
      relocalization and mitophagy function, directly tying the LLPS/condensate-scaffold
      molecular function to intracellular organelle quality control. Emerging,
      context-specific extension of the damaged-endomembrane glycan-sensing role.
- id: PMID:7682704
  title: Decreased expression of Mac-2 (carbohydrate binding protein 35) and loss
    of its nuclear localization are associated with the neoplastic progression of
    colon carcinoma.
  findings: []
  reference_review:
    relevance: MEDIUM
    correctness: VERIFIED
    review_notes: Supports nuclear localization of galectin-3 (Mac-2/CBP35) in colonic
      epithelium.
- id: PMID:8692888
  title: Expression of galectin-3 modulates T-cell growth and apoptosis.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: Shows galectin-3 overexpression promotes T-cell growth and resistance to
      apoptosis; notes Bcl-2-like NWGR motif and lactose-inhibitable Bcl-2 interaction.
- id: PMID:9162064
  title: Strikingly different localization of galectin-3 and galectin-4 in human colon
    adenocarcinoma T84 cells. Galectin-4 is localized at sites of cell adhesion.
  findings: []
- id: PMID:9447709
  title: Detection and distribution of the carbohydrate binding protein galectin-3
    in human notochord, intervertebral disc and chordoma.
  findings: []
- id: PMID:9582341
  title: X-ray crystal structure of the human galectin-3 carbohydrate recognition
    domain at 2.1-A resolution.
  findings: []
  reference_review:
    relevance: HIGH
    correctness: VERIFIED
    review_notes: High-resolution structure of the galectin-3 CRD; structural basis of
      beta-galactoside recognition (PDB 1A3K).
- id: Reactome:R-HSA-6798743
  title: Exocytosis of secretory granule membrane proteins
  findings: []
- id: Reactome:R-HSA-6800426
  title: Exocytosis of ficolin-rich granule membrane proteins
  findings: []
- id: Reactome:R-HSA-8938382
  title: LGALS3 gene expression is stimulated by RUNX1 and RUNX2
  findings: []
- id: PMID:11434930
  title: "Thermodynamic analysis of the binding of galactose and poly-N-acetyllactosamine derivatives to human galectin-3."
  findings: []
- id: PMID:2332426
  title: "The major non-integrin laminin binding protein of macrophages is identical to carbohydrate binding protein 35 (Mac-2)."
  findings: []
- id: PMID:8347574
  title: "Epsilon BP, a beta-galactoside-binding animal lectin, recognizes IgE receptor (Fc epsilon RI) and activates mast cells."
  findings: []
- id: PMID:12070075
  title: "Shuttling of galectin-3 between the nucleus and cytoplasm."
  findings: []
- id: PMID:23576987
  title: "Eosinophil-expressed galectin-3 regulates cell trafficking and migration."
  findings: []
- id: PMID:11823514
  title: "Role of galectin-3 as an adhesion molecule for neutrophil extravasation during streptococcal pneumonia."
  findings: []
existing_annotations:
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    summary: Galectin-3 is secreted and functions extracellularly, cross-linking ECM
      glycoproteins (e.g. laminin) into lattices. Extracellular matrix as a site of action is
      consistent with the lectin/lattice function, though it is a downstream/extracellular role
      rather than the gene's primary intracellular biology.
    action: KEEP_AS_NON_CORE
    reason: Well-supported extracellular site of action via phylogenetic inference, but a
      pleiotropic extracellular localization rather than a core defining feature.
- term:
    id: GO:0048030
    label: disaccharide binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    supported_by:
    - reference_id: PMID:11434930
      supporting_text: "Recognized by its specificity for galactose, a detailed characterization of its sugar binding ability has been investigated by isothermal titration calorimetry."
    summary: Galectin-3 binds beta-galactoside disaccharides such as lactose and LacNAc through
      its CRD. This is a more specific child of carbohydrate binding and accurately captures the
      core lectin activity.
    action: ACCEPT
    reason: Disaccharide (beta-galactoside) binding is phylogenetically conserved and central
      to galectin-3 function; well supported experimentally.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    supported_by:
    - reference_id: PMID:12070075
      supporting_text: "galectin-3 was identified as a component of a nuclear and cytoplasmic complex, the survival of motor neuron complex, through its interaction with Gemin4."
    summary: Galectin-3 is present and active in the nucleus (implicated as a pre-mRNA splicing
      factor and RNA-binding protein). Nuclear localization is well established experimentally
      and by phylogenetic inference.
    action: ACCEPT
    reason: Nuclear localization is a conserved, experimentally corroborated feature of
      galectin-3.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    supported_by:
    - reference_id: PMID:12070075
      supporting_text: "Shuttling of galectin-3 between the nucleus and cytoplasm."
    summary: Galectin-3 is predominantly cytoplasmic in many cell types, with roles in
      endomembrane-damage sensing and anti-apoptotic signaling. Cytoplasmic localization is
      well supported.
    action: ACCEPT
    reason: Cytoplasmic localization is conserved and experimentally corroborated.
- term:
    id: GO:0050918
    label: positive chemotaxis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: "Human galectin-3 is a novel chemoattractant for monocytes and macrophages."
    summary: Galectin-3 acts as a chemoattractant for monocytes/macrophages, a downstream
      immune-modulatory consequence of its extracellular lectin activity. Real but pleiotropic.
    action: KEEP_AS_NON_CORE
    reason: Phylogenetically inferred chemoattractant role corroborated experimentally
      (PMID:10925302), but a downstream process rather than the core molecular function.
- term:
    id: GO:0001772
    label: immunological synapse
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: is_active_in
  review:
    supported_by:
    - reference_id: PMID:19706535
      supporting_text: "Galectin-3 was recruited to the cytoplasmic side of the immunological synapse (IS) in activated T cells."
    summary: Galectin-3 localizes to the immunological synapse where it negatively regulates
      TCR signaling. A specialized site of action, downstream of the lattice function.
    action: KEEP_AS_NON_CORE
    reason: Specialized cell-type-specific site of action; supported but not core to the gene's
      general function.
- term:
    id: GO:0002548
    label: monocyte chemotaxis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: "galectin-3 induced human monocyte migration in vitro in a dose-dependent manner, and it was chemotactic at high concentrations (1.0 microM) but chemokinetic at low concentrations (10-100 nM)."
    summary: Monocyte chemotaxis is a documented downstream immune activity (PMID:10925302).
      Pleiotropic, not core.
    action: KEEP_AS_NON_CORE
    reason: Real but downstream immune process; redundant with the experimental IDA annotation.
- term:
    id: GO:0019863
    label: IgE binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    supported_by:
    - reference_id: PMID:8347574
      supporting_text: "IgE-binding protein (epsilon BP) was originally identified in rat basophilic leukemia (RBL) cells by virtue of its affinity for IgE."
    summary: Galectin-3 was originally identified and named as the "IgE-binding protein";
      IgE binding is the historical defining activity and a specific glycan-mediated
      manifestation of the core carbohydrate-binding function. Accepted as core, consistent
      with the IDA IgE-binding annotation and the accepted disaccharide-binding (GO:0048030)
      core function.
    action: ACCEPT
    reason: Historical defining activity ("IgE-binding protein"); a specific manifestation of
      the core CRD glycan-binding function, kept consistent with the IDA annotation.
- term:
    id: GO:0030593
    label: neutrophil chemotaxis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:11823514
      supporting_text: "Role of galectin-3 as an adhesion molecule for neutrophil extravasation during streptococcal pneumonia."
    summary: Galectin-3 promotes neutrophil chemotaxis/adhesion in inflammation. Downstream
      immune role.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process.
- term:
    id: GO:0043236
    label: laminin binding
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: enables
  review:
    supported_by:
    - reference_id: PMID:2332426
      supporting_text: "The major non-integrin laminin binding protein of macrophages is identical to carbohydrate binding protein 35 (Mac-2)."
    summary: Galectin-3 binds laminin (a heavily glycosylated ECM glycoprotein) via its CRD;
      historically named laminin-binding protein. A specific glycan-dependent binding event.
    action: KEEP_AS_NON_CORE
    reason: A specific glycoprotein-binding facet of the core lectin function.
- term:
    id: GO:0045806
    label: negative regulation of endocytosis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: Galectin-3 lattices retain glycoproteins at the cell surface and reduce their
      endocytosis (e.g. at the immunological synapse, PMID:19706535). Downstream consequence of
      lattice formation.
    action: KEEP_AS_NON_CORE
    reason: Downstream regulatory effect of surface-lattice formation; not a core function.
- term:
    id: GO:0048245
    label: eosinophil chemotaxis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:23576987
      supporting_text: "allergen-challenged mice deficient in Gal-3 (Gal-3(-/-)) exhibit decreased airway recruitment of eosinophils (Eos)"
    summary: Galectin-3 promotes eosinophil chemotaxis in allergic inflammation. Downstream
      immune role.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process.
- term:
    id: GO:0048246
    label: macrophage chemotaxis
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: "Human galectin-3 is a novel chemoattractant for monocytes and macrophages."
    summary: Galectin-3 chemoattracts macrophages (PMID:10925302). Downstream immune role.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process; redundant with experimental IDA.
- term:
    id: GO:0090280
    label: positive regulation of calcium ion import
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: "Galectin-3 caused a Ca2+ influx in monocytes at high, but not low, concentrations, and both lactose and PTX inhibited this response."
    summary: Galectin-3 triggers a Ca2+ influx in monocytes at high concentrations
      (PMID:10925302), a signaling consequence of receptor cross-linking. Downstream effect.
    action: KEEP_AS_NON_CORE
    reason: Downstream signaling consequence of lattice/receptor cross-linking; not core.
- term:
    id: GO:2001237
    label: negative regulation of extrinsic apoptotic signaling pathway
  evidence_type: IBA
  original_reference_id: GO_REF:0000033
  qualifier: involved_in
  review:
    summary: Galectin-3 has anti-apoptotic activity (Bcl-2-like, NWGR motif; PMID:8692888,
      PMID:22761016). A pleiotropic, context-dependent process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic apoptosis-regulatory role; not the core molecular function.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Galectin-3 is secreted via a non-classical route and is abundant extracellularly.
      Localization is correct but downstream of intracellular biology.
    action: KEEP_AS_NON_CORE
    reason: Correct secreted localization (SubCell mapping), pleiotropic extracellular site.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Nuclear localization, consistent with the experimental IDA and IBA annotations.
    action: ACCEPT
    reason: Correct nuclear localization corroborated by multiple experimental annotations.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IEA
  original_reference_id: GO_REF:0000044
  qualifier: located_in
  review:
    summary: Cytoplasmic localization, consistent with experimental IDA/IBA annotations.
    action: ACCEPT
    reason: Correct cytoplasmic localization corroborated by multiple experimental annotations.
- term:
    id: GO:0007165
    label: signal transduction
  evidence_type: IEA
  original_reference_id: GO_REF:0000108
  qualifier: involved_in
  review:
    summary: This is an extremely general term auto-inferred from the receptor-ligand-activity
      annotation. It conveys little about galectin-3's actual function and is far less
      informative than the specific immune-modulatory and lectin activities.
    action: MARK_AS_OVER_ANNOTATED
    reason: Uninformative high-level BP term derived by inter-ontology inference; better
      captured by specific processes.
- term:
    id: GO:0030246
    label: carbohydrate binding
  evidence_type: IEA
  original_reference_id: GO_REF:0000120
  qualifier: enables
  review:
    summary: Carbohydrate binding is the core molecular function of galectin-3. The IEA
      annotation is fully consistent with extensive experimental and structural data.
    action: ACCEPT
    reason: Correct core molecular function; redundant with experimental EXP/TAS annotations.
- term:
    id: GO:0042129
    label: regulation of T cell proliferation
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: involved_in
  review:
    summary: ARBA-predicted; galectin-3 does modulate T-cell growth (PMID:8692888). Real but
      pleiotropic and also captured by the experimental IMP annotation.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic immune process; redundant with experimental annotation.
- term:
    id: GO:0046636
    label: negative regulation of alpha-beta T cell activation
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: involved_in
  review:
    summary: ARBA-predicted; consistent with negative regulation of TCR signaling at the
      synapse (PMID:19706535). Pleiotropic immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune regulation; supported but not core.
- term:
    id: GO:0048018
    label: receptor ligand activity
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: enables
  review:
    summary: ARBA-predicted generic receptor ligand activity. For galectin-3 the experimentally
      supported activity is specifically an inhibitory ligand of NKp30 (GO:0141069, IDA);
      generic receptor ligand activity is less precise and partly conflicts with the inhibitory
      role.
    action: MARK_AS_OVER_ANNOTATED
    reason: Less precise than the experimentally supported receptor ligand inhibitor activity;
      generic prediction.
- term:
    id: GO:0070232
    label: regulation of T cell apoptotic process
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: involved_in
  review:
    summary: ARBA-predicted; consistent with the experimental IDA annotation (PMID:8692888).
      Pleiotropic immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic immune process; redundant with experimental annotation.
- term:
    id: GO:0071677
    label: positive regulation of mononuclear cell migration
  evidence_type: IEA
  original_reference_id: GO_REF:0000117
  qualifier: involved_in
  review:
    summary: ARBA-predicted; consistent with the experimental chemotaxis annotation
      (PMID:10925302). Downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process; redundant with experimental annotation.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19706535
  qualifier: enables
  review:
    summary: A generic protein-binding (IPI) record recording a physical interaction from
      PMID:19706535. Generic protein binding is uninformative per curation guidelines and
      conveys no specific functional information about galectin-3. The informative molecular
      function is its carbohydrate/galactoside binding, with most partner contacts being
      glycan-mediated; this generic protein-binding term does not capture an annotated
      function and the specific physical-interaction details are better recorded elsewhere.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding conveys no specific functional information; the informative
      MF is carbohydrate binding.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:20812334
  qualifier: enables
  review:
    summary: Interaction with MMP7 (which cleaves galectin-3). Generic protein binding is
      uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:21712812
  qualifier: enables
  review:
    summary: Interaction with MICA in the context of NK-cell evasion. Generic protein binding
      is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:2402511
  qualifier: enables
  review:
    summary: From the original cloning paper (here the AHSG/fetuin-A interaction). Generic
      protein binding is uninformative; the paper's value is establishing the galactose-specific
      lectin identity.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:24945728
  qualifier: enables
  review:
    summary: Interaction with CD6 (PMID:24945728). Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25315772
  qualifier: enables
  review:
    summary: Interaction with NKp30/NCR3 as a soluble inhibitory ligand. The informative MF is
      receptor ligand inhibitor activity (GO:0141069), not generic protein binding.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; better captured by receptor ligand inhibitor activity.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:25416956
  qualifier: enables
  review:
    summary: High-throughput interactome screen. Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:28514442
  qualifier: enables
  review:
    summary: High-throughput interactome screen. Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:29427412
  qualifier: enables
  review:
    summary: Interaction with the CHI3L1/IL13RA2 axis. Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:31515488
  qualifier: enables
  review:
    summary: Interaction-disruption-by-variant screen. Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:31540324
  qualifier: enables
  review:
    summary: Interaction with endoglin (ENG). Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32296183
  qualifier: enables
  review:
    summary: High-throughput binary interactome screen. Generic protein binding is
      uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:32915505
  qualifier: enables
  review:
    summary: Interaction with SARS-CoV-2 spike glycoprotein, a glycan-mediated lectin contact.
      Generic protein binding is uninformative; the activity is carbohydrate (glycan) binding.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; the underlying activity is glycan recognition.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:33961781
  qualifier: enables
  review:
    summary: High-throughput interactome screen. Generic protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:40205054
  qualifier: enables
  review:
    summary: High-throughput cell-map interactome study (ALCAM interaction). Generic protein
      binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding from a high-throughput screen; not informative.
- term:
    id: GO:0005654
    label: nucleoplasm
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: HPA immunofluorescence places galectin-3 in the nucleoplasm, consistent with its
      established nuclear localization.
    action: ACCEPT
    reason: Specific, experimentally supported nuclear sub-localization.
- term:
    id: GO:0005829
    label: cytosol
  evidence_type: IDA
  original_reference_id: GO_REF:0000052
  qualifier: located_in
  review:
    summary: HPA immunofluorescence places galectin-3 in the cytosol, consistent with its
      established cytoplasmic localization.
    action: ACCEPT
    reason: Specific, experimentally supported cytosolic localization.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: EXP
  original_reference_id: PMID:32272059
  qualifier: located_in
  review:
    summary: Galectin-3 is secreted via the TMED10-facilitated non-classical pathway into the
      extracellular region. Experimentally supported but downstream localization.
    action: KEEP_AS_NON_CORE
    reason: Correct secreted localization; pleiotropic extracellular site of action.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: EXP
  original_reference_id: PMID:32272059
  qualifier: located_in
  review:
    summary: Cytoplasmic pool of galectin-3 is the substrate for non-classical secretion via
      TMED10 (PMID:32272059). Consistent with established cytoplasmic localization.
    action: ACCEPT
    reason: Experimentally supported cytoplasmic localization.
- term:
    id: GO:0004864
    label: protein phosphatase inhibitor activity
  evidence_type: IDA
  original_reference_id: PMID:24846175
  qualifier: enables
  review:
    summary: In PMID:24846175 galectin-3 binds branched N-glycans on the phosphatase PTPRT and
      promotes its dimerization, which indirectly reduces PTPRT catalytic activity. This is a
      glycan-lattice effect on receptor clustering, not a direct allosteric/competitive
      phosphatase-inhibitor molecular function.
    action: MARK_AS_OVER_ANNOTATED
    reason: The effect on phosphatase activity is indirect (via glycan-mediated dimerization),
      not a direct enzyme-inhibitor molecular function.
    supported_by:
    - reference_id: PMID:24846175
      supporting_text: GnT-V overexpression enhances galectin-3's cell-surface retention and
        promotes PTPRT's dimerization mediated by galectin-3. Increased dimerization subsequently
        reduces PTPRT's catalytic activity
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: IDA
  original_reference_id: PMID:26582946
  qualifier: is_active_in
  review:
    summary: Secreted galectin-3 acts extracellularly as an inhibitory ligand of NKp30 on ILC2
      (PMID:26582946). Experimentally supported extracellular site of action.
    action: KEEP_AS_NON_CORE
    reason: Correct extracellular site of action; pleiotropic immune context.
- term:
    id: GO:0051134
    label: negative regulation of NK T cell activation
  evidence_type: IDA
  original_reference_id: PMID:26582946
  qualifier: involved_in
  review:
    summary: Galectin-3 blocks NKp30-B7-H6 activation (PMID:26582946), inhibiting NK/ILC2
      activation. Downstream immune-modulatory process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic downstream immune process.
    supported_by:
    - reference_id: PMID:26582946
      supporting_text: This interaction can be blocked by NKp30 blocking Ab and an inhibitory
        ligand, galectin-3.
- term:
    id: GO:0141069
    label: receptor ligand inhibitor activity
  evidence_type: IDA
  original_reference_id: PMID:26582946
  qualifier: enables
  review:
    summary: Galectin-3 acts as a soluble inhibitory ligand of the NKp30 (NCR3) receptor,
      blocking its activation by B7-H6 (PMID:26582946, PMID:25315772). This is a specific,
      experimentally supported molecular function.
    action: ACCEPT
    reason: Specific, experimentally supported molecular function (inhibitory NKp30 ligand).
    supported_by:
    - reference_id: PMID:26582946
      supporting_text: This interaction can be blocked by NKp30 blocking Ab and an inhibitory
        ligand, galectin-3.
- term:
    id: GO:0030246
    label: carbohydrate binding
  evidence_type: EXP
  original_reference_id: PMID:28973299
  qualifier: enables
  review:
    summary: NMR mapping (PMID:28973299) demonstrates carbohydrate binding at two CRD sites and
      a novel N-terminal-tail site. This is the core molecular function of galectin-3.
    action: ACCEPT
    reason: Direct experimental evidence for the core carbohydrate-binding molecular function.
    supported_by:
    - reference_id: PMID:28973299
      supporting_text: epitopes for binding to three sites on 15N-labeled Gal-3, two within its
        carbohydrate recognition domain (CRD) and one at a novel site within the NT
- term:
    id: GO:0140693
    label: molecular condensate scaffold activity
  evidence_type: IDA
  original_reference_id: PMID:28893908
  qualifier: enables
  review:
    summary: The disordered N-terminal domain drives multisite self-association and
      liquid-liquid phase separation (PMID:28893908), the molecular basis of galectin-3's
      multivalency and lattice/condensate formation. A core, distinctive molecular function.
    action: ACCEPT
    reason: Experimentally supported; underpins galectin-3's distinctive lattice/condensate
      behavior.
    supported_by:
    - reference_id: PMID:28893908
      supporting_text: galectin-3 can also undergo liquid-liquid phase separation
- term:
    id: GO:0140693
    label: molecular condensate scaffold activity
  evidence_type: IDA
  original_reference_id: PMID:32144274
  qualifier: enables
  review:
    summary: Galectin-3's N-terminal domain undergoes LLPS and bridges/aggregates glycosylated
      molecules (PMID:32144274), explaining its extracellular agglutination function. Supports
      the condensate-scaffold/lattice activity.
    action: ACCEPT
    reason: Experimentally supported condensate-scaffold/lattice activity.
    supported_by:
    - reference_id: PMID:32144274
      supporting_text: its N-terminal domain (NTD) undergoes LLPS driven by interactions between
        its aromatic residues
- term:
    id: GO:0031334
    label: positive regulation of protein-containing complex assembly
  evidence_type: IDA
  original_reference_id: PMID:24846175
  qualifier: involved_in
  review:
    summary: Galectin-3 promotes glycan-dependent dimerization of PTPRT (PMID:24846175), an
      instance of promoting receptor complex assembly via lattice formation. A downstream
      consequence of the lattice function.
    action: KEEP_AS_NON_CORE
    reason: Downstream consequence of glycan-lattice formation; not a core function in itself.
    supported_by:
    - reference_id: PMID:24846175
      supporting_text: promotes PTPRT's dimerization mediated by galectin-3
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: HDA
  original_reference_id: PMID:28327460
  qualifier: colocalizes_with
  review:
    summary: High-throughput proteomic detection of galectin-3 in stem-cell-derived ECM.
      Localization-by-detection, consistent with secretion.
    action: KEEP_AS_NON_CORE
    reason: Proteomics colocalization; consistent with secreted galectin-3 but not a functional
      or core annotation.
- term:
    id: GO:0019903
    label: protein phosphatase binding
  evidence_type: IPI
  original_reference_id: PMID:24846175
  qualifier: enables
  review:
    summary: Galectin-3 binds the phosphatase PTPRT (PMID:24846175). This is a glycan-mediated
      contact; more informatively captured by carbohydrate binding, but a specific documented
      partner.
    action: KEEP_AS_NON_CORE
    reason: Specific documented interaction; glycan-mediated and downstream of lectin activity.
- term:
    id: GO:1903078
    label: positive regulation of protein localization to plasma membrane
  evidence_type: IDA
  original_reference_id: PMID:24846175
  qualifier: involved_in
  review:
    summary: Galectin-3 lattices retain glycoproteins (e.g. PTPRT) at the cell surface,
      prolonging plasma-membrane residence (PMID:24846175). Downstream consequence of lattice
      formation.
    action: KEEP_AS_NON_CORE
    reason: Downstream consequence of surface-lattice formation; not a core function.
    supported_by:
    - reference_id: PMID:24846175
      supporting_text: addition of β1,6 GlcNAc branches on PTPRT prolongs PTPRT's cell-surface
        retention time
- term:
    id: GO:0009986
    label: cell surface
  evidence_type: ISS
  original_reference_id: GO_REF:0000024
  qualifier: located_in
  review:
    summary: Galectin-3 associates with the cell surface after non-classical secretion, where
      it forms glycan lattices. Cell-surface localization is consistent with its extracellular
      lattice function.
    action: KEEP_AS_NON_CORE
    reason: Correct extracellular/cell-surface site of action; pleiotropic.
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: HDA
  original_reference_id: PMID:28675934
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in tissue ECM. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: HDA
  original_reference_id: PMID:25037231
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in colon cancer ECM. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: HDA
  original_reference_id: PMID:27068509
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in varicose-vein ECM. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: HDA
  original_reference_id: PMID:27559042
  qualifier: located_in
  review:
    summary: Glycoproteomic detection of galectin-3 in atrial-fibrillation tissue ECM.
      Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0031012
    label: extracellular matrix
  evidence_type: HDA
  original_reference_id: PMID:20551380
  qualifier: colocalizes_with
  review:
    summary: Proteomic characterization of aortic extracellular space detected galectin-3.
      Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0030667
    label: secretory granule membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6798743
  qualifier: located_in
  review:
    summary: Reactome places galectin-3 at the secretory (specific) granule membrane in the
      context of neutrophil degranulation. Consistent with packaging for secretion in
      neutrophils; specialized cell-type context.
    action: KEEP_AS_NON_CORE
    reason: Cell-type-specific granule localization from pathway annotation; not core.
- term:
    id: GO:0101003
    label: ficolin-1-rich granule membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6800426
  qualifier: located_in
  review:
    summary: Reactome places galectin-3 at the ficolin-1-rich granule membrane in neutrophil
      degranulation. Specialized cell-type context.
    action: KEEP_AS_NON_CORE
    reason: Cell-type-specific granule localization from pathway annotation; not core.
- term:
    id: GO:2001200
    label: positive regulation of dendritic cell differentiation
  evidence_type: IDA
  original_reference_id: PMID:16116184
  qualifier: involved_in
  negated: true
  review:
    summary: This is a NOT annotation. PMID:16116184 shows galectin-9 (not galectin-3) induces
      dendritic-cell maturation; galectin-3 lacks this activity. The negated annotation
      correctly records the absence of this function for galectin-3.
    action: ACCEPT
    reason: Correctly recorded negative (NOT) annotation distinguishing galectin-3 from
      galectin-9.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:23533145
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in urinary/prostatic-secretion exosomes.
      Localization-by-detection, consistent with secretion.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization; consistent with secretion but not core or functional.
- term:
    id: GO:0016020
    label: membrane
  evidence_type: HDA
  original_reference_id: PMID:19946888
  qualifier: located_in
  review:
    summary: NK-cell membrane proteome detection. Very general localization-by-detection term.
    action: MARK_AS_OVER_ANNOTATED
    reason: Extremely general localization from a proteomics screen; uninformative.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IDA
  original_reference_id: PMID:7682704
  qualifier: located_in
  review:
    summary: Direct experimental evidence of nuclear localization of galectin-3 (Mac-2/CBP35)
      in colonic epithelium (PMID:7682704). Core localization.
    action: ACCEPT
    reason: Direct experimental evidence for nuclear localization.
- term:
    id: GO:0050860
    label: negative regulation of T cell receptor signaling pathway
  evidence_type: ISS
  original_reference_id: PMID:19706535
  qualifier: involved_in
  review:
    summary: Transferred from mouse ortholog (P16110); galectin-3 negatively regulates TCR
      signaling at the synapse. Pleiotropic downstream immune regulation.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune-regulatory process (ortholog transfer).
- term:
    id: GO:2000521
    label: negative regulation of immunological synapse formation
  evidence_type: ISS
  original_reference_id: PMID:19706535
  qualifier: involved_in
  review:
    summary: Transferred from mouse ortholog; galectin-3 limits TCR clustering at the synapse.
      Pleiotropic downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process (ortholog transfer).
- term:
    id: GO:2001189
    label: negative regulation of T cell activation via T cell receptor contact with
      antigen bound to MHC molecule on antigen presenting cell
  evidence_type: ISS
  original_reference_id: PMID:19706535
  qualifier: involved_in
  review:
    summary: Transferred from mouse ortholog; a highly specific child term of the negative TCR
      regulation role. Pleiotropic downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic, highly specific downstream immune process (ortholog transfer).
- term:
    id: GO:0042129
    label: regulation of T cell proliferation
  evidence_type: IMP
  original_reference_id: PMID:8692888
  qualifier: involved_in
  review:
    summary: Galectin-3 overexpression increases T-cell growth rates (PMID:8692888), an
      experimentally supported but pleiotropic immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic immune process supported by experimental evidence.
    supported_by:
    - reference_id: PMID:8692888
      supporting_text: Transfectants expressing galectin-3 displayed higher growth rates than
        control transfectants
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:9447709
  qualifier: located_in
  review:
    summary: Direct detection of cytoplasmic galectin-3 in notochord/intervertebral disc tissue
      (PMID:9447709). Core localization.
    action: ACCEPT
    reason: Direct experimental evidence for cytoplasmic localization.
- term:
    id: GO:0001772
    label: immunological synapse
  evidence_type: IDA
  original_reference_id: PMID:19706535
  qualifier: located_in
  review:
    summary: Galectin-3 localizes to the immunological synapse where it down-regulates TCR
      signaling (PMID:19706535). Specialized site of action.
    action: KEEP_AS_NON_CORE
    reason: Specialized cell-type-specific site of action; not core.
- term:
    id: GO:0002548
    label: monocyte chemotaxis
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 chemoattracts monocytes (PMID:10925302), blocked by lactose and a CRD
      fragment, via a PTX-sensitive pathway. Downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic downstream immune process.
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: galectin-3 is a novel chemoattractant for monocytes and macrophages
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IDA
  original_reference_id: PMID:22761016
  qualifier: located_in
  review:
    summary: Galectin-3 detected in the nucleus (PMID:22761016). Consistent with established
      nuclear localization.
    action: ACCEPT
    reason: Experimentally supported nuclear localization.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:22761016
  qualifier: located_in
  review:
    summary: Cytoplasmic galectin-3 mediates anti-apoptotic activity; EGF suppresses cytoplasmic
      galectin-3 to permit apoptosis (PMID:22761016). Consistent with cytoplasmic localization.
    action: ACCEPT
    reason: Experimentally supported cytoplasmic localization.
    supported_by:
    - reference_id: PMID:22761016
      supporting_text: High concentrations of EGF suppressed cytoplasmic expression of galectin-3
- term:
    id: GO:0019863
    label: IgE binding
  evidence_type: IDA
  original_reference_id: PMID:2261464
  qualifier: enables
  review:
    summary: Galectin-3 was originally identified and named as the "IgE-binding protein,"
      so IgE binding is the historical defining activity of this gene product. It is a
      direct manifestation of the CRD's beta-galactoside / glycan-binding activity (the
      core molecular function), recognizing IgE glycoforms via its lectin domain. Because
      it is a specific, directly demonstrated (IDA) instance of the core carbohydrate-binding
      activity, it is accepted as core, consistent with the IBA disaccharide-binding
      (GO:0048030) annotation being accepted as core.
    action: ACCEPT
    reason: Historical defining activity of galectin-3 ("IgE-binding protein"); a specific,
      experimentally demonstrated manifestation of the core CRD glycan-binding function,
      consistent with treating the underlying beta-galactoside/glycan recognition as core.
- term:
    id: GO:0030593
    label: neutrophil chemotaxis
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 promotes neutrophil chemotaxis (PMID:10925302). Downstream immune
      process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic downstream immune process.
- term:
    id: GO:0042056
    label: chemoattractant activity
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: enables
  review:
    summary: Galectin-3 functions as a chemoattractant for monocytes/macrophages (PMID:10925302).
      This is an experimentally supported molecular function, mediated by its lectin/lattice
      activity at the cell surface. Real but a specialized immune-context activity.
    action: KEEP_AS_NON_CORE
    reason: Experimentally supported but specialized immune-context molecular function, downstream
      of the core lectin activity.
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: galectin-3 induced human monocyte migration in vitro in a dose-dependent
        manner
- term:
    id: GO:0045806
    label: negative regulation of endocytosis
  evidence_type: IDA
  original_reference_id: PMID:19706535
  qualifier: involved_in
  review:
    summary: Galectin-3 lattices reduce receptor endocytosis at the immunological synapse
      (PMID:19706535). Downstream consequence of surface-lattice formation.
    action: KEEP_AS_NON_CORE
    reason: Downstream consequence of lattice formation; not core.
- term:
    id: GO:0048245
    label: eosinophil chemotaxis
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 promotes eosinophil chemotaxis (PMID:10925302). Downstream immune
      process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic downstream immune process.
- term:
    id: GO:0048246
    label: macrophage chemotaxis
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 chemoattracts macrophages (PMID:10925302). Downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Real but pleiotropic downstream immune process.
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: Cultured human macrophages and alveolar macrophages also migrated toward
        galectin-3
- term:
    id: GO:0050918
    label: positive chemotaxis
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 drives positive chemotaxis of myeloid cells (PMID:10925302). Downstream
      immune process; redundant parent of the specific chemotaxis terms.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process.
- term:
    id: GO:0070232
    label: regulation of T cell apoptotic process
  evidence_type: IDA
  original_reference_id: PMID:8692888
  qualifier: involved_in
  review:
    summary: Galectin-3 expression confers resistance to apoptosis in T cells (PMID:8692888).
      Pleiotropic immune/apoptosis process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune/apoptosis process.
    supported_by:
    - reference_id: PMID:8692888
      supporting_text: galectin-3 expression in these cells confers resistance to apoptosis
        induced by anti-Fas antibody and staurosporine
- term:
    id: GO:0071674
    label: mononuclear cell migration
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 induces mononuclear cell (monocyte) migration (PMID:10925302).
      Downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process.
- term:
    id: GO:0071677
    label: positive regulation of mononuclear cell migration
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 positively regulates mononuclear cell migration (PMID:10925302).
      Downstream immune process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream immune process.
- term:
    id: GO:0090280
    label: positive regulation of calcium ion import
  evidence_type: IDA
  original_reference_id: PMID:10925302
  qualifier: involved_in
  review:
    summary: Galectin-3 induces Ca2+ influx in monocytes at high concentrations (PMID:10925302).
      Downstream signaling consequence of receptor cross-linking.
    action: KEEP_AS_NON_CORE
    reason: Downstream signaling consequence; not core.
    supported_by:
    - reference_id: PMID:10925302
      supporting_text: Galectin-3 caused a Ca2+ influx in monocytes at high, but not low,
        concentrations
- term:
    id: GO:1902041
    label: regulation of extrinsic apoptotic signaling pathway via death domain receptors
  evidence_type: IMP
  original_reference_id: PMID:8692888
  qualifier: involved_in
  review:
    summary: Galectin-3 confers resistance to Fas (death-receptor)-induced apoptosis in T cells
      (PMID:8692888). Pleiotropic apoptosis-regulatory process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream apoptosis-regulatory process.
    supported_by:
    - reference_id: PMID:8692888
      supporting_text: confers resistance to apoptosis induced by anti-Fas antibody and
        staurosporine
- term:
    id: GO:2001237
    label: negative regulation of extrinsic apoptotic signaling pathway
  evidence_type: IDA
  original_reference_id: PMID:22761016
  qualifier: involved_in
  review:
    summary: Cytoplasmic galectin-3 has anti-apoptotic activity; its downregulation by EGF
      permits apoptosis (PMID:22761016). Pleiotropic apoptosis-regulatory process.
    action: KEEP_AS_NON_CORE
    reason: Pleiotropic downstream apoptosis-regulatory process.
    supported_by:
    - reference_id: PMID:22761016
      supporting_text: overexpression of galectin-3 could reduce EGF-induced apoptosis in HepG2
        cells
- term:
    id: GO:0003723
    label: RNA binding
  evidence_type: HDA
  original_reference_id: PMID:22658674
  qualifier: enables
  review:
    summary: Galectin-3 was captured in a high-throughput mRNA-interactome screen (PMID:22658674)
      and has a proposed nuclear pre-mRNA splicing role. RNA binding is plausible but rests on a
      proteome-wide capture rather than a dedicated functional assay.
    action: KEEP_AS_NON_CORE
    reason: Plausible nuclear RNA-associated role from a high-throughput screen; not a core,
      directly demonstrated molecular function.
- term:
    id: GO:0043236
    label: laminin binding
  evidence_type: IDA
  original_reference_id: PMID:2402511
  qualifier: enables
  review:
    summary: Galectin-3 binds laminin (PMID:2402511); historically named laminin-binding protein.
      A specific glycoprotein-binding facet of the core lectin function.
    action: KEEP_AS_NON_CORE
    reason: Specific glycoprotein-binding facet of the core lectin function.
- term:
    id: GO:0030855
    label: epithelial cell differentiation
  evidence_type: IEP
  original_reference_id: PMID:21492153
  qualifier: involved_in
  review:
    summary: Galectin-3 expression changes during Caco-2 enterocyte differentiation
      (PMID:21492153), an IEP (expression-pattern) correlation rather than a direct functional
      assay. Pleiotropic, correlative.
    action: KEEP_AS_NON_CORE
    reason: Correlative expression-pattern (IEP) evidence; pleiotropic developmental process.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: HDA
  original_reference_id: PMID:22664934
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in tears. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0005576
    label: extracellular region
  evidence_type: HDA
  original_reference_id: PMID:23580065
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in tears (glaucoma study). Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:19199708
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in parotid-gland exosomes. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0070062
    label: extracellular exosome
  evidence_type: HDA
  original_reference_id: PMID:19056867
  qualifier: located_in
  review:
    summary: Proteomic detection of galectin-3 in urinary exosomes. Localization-by-detection.
    action: KEEP_AS_NON_CORE
    reason: Proteomics localization consistent with secretion; not core.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6798743
  qualifier: located_in
  review:
    summary: Reactome places galectin-3 at the plasma membrane in the neutrophil-degranulation
      pathway. Consistent with cell-surface association after secretion.
    action: KEEP_AS_NON_CORE
    reason: Cell-surface association from pathway annotation; not core.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-6800426
  qualifier: located_in
  review:
    summary: Reactome plasma-membrane annotation (ficolin-rich granule pathway). Consistent with
      cell-surface association.
    action: KEEP_AS_NON_CORE
    reason: Cell-surface association from pathway annotation; not core.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: Reactome:R-HSA-8938382
  qualifier: located_in
  review:
    summary: Reactome plasma-membrane annotation (RUNX-regulated expression pathway). Consistent
      with cell-surface association after secretion.
    action: KEEP_AS_NON_CORE
    reason: Cell-surface association from pathway annotation; not core.
- term:
    id: GO:0005515
    label: protein binding
  evidence_type: IPI
  original_reference_id: PMID:19016746
  qualifier: enables
  review:
    summary: Interaction with mitochondrial F1F0-ATP synthase in colon cancer cells. Generic
      protein binding is uninformative.
    action: MARK_AS_OVER_ANNOTATED
    reason: Generic protein binding; not an informative molecular function.
- term:
    id: GO:0005743
    label: mitochondrial inner membrane
  evidence_type: IDA
  original_reference_id: PMID:19016746
  qualifier: located_in
  review:
    summary: A single study (PMID:19016746) reports galectin-3 at the mitochondrial inner
      membrane via interaction with F1F0-ATP synthase in colon cancer cells. This is an
      unusual, context-specific localization not corroborated by the broader literature
      (cytoplasm/nucleus/secreted), so it is treated as non-core.
    action: KEEP_AS_NON_CORE
    reason: Single-study, context-specific localization not corroborated by the broader
      literature; retained but non-core.
- term:
    id: GO:0005634
    label: nucleus
  evidence_type: IDA
  original_reference_id: PMID:14961764
  qualifier: located_in
  review:
    summary: Galectin-3 detected in the nucleus (PMID:14961764). Consistent with established
      nuclear localization.
    action: ACCEPT
    reason: Experimentally supported nuclear localization.
- term:
    id: GO:0005737
    label: cytoplasm
  evidence_type: IDA
  original_reference_id: PMID:14961764
  qualifier: located_in
  review:
    summary: Galectin-3 detected in the cytoplasm (PMID:14961764). Consistent with established
      cytoplasmic localization.
    action: ACCEPT
    reason: Experimentally supported cytoplasmic localization.
- term:
    id: GO:0030246
    label: carbohydrate binding
  evidence_type: TAS
  original_reference_id: PMID:9162064
  qualifier: enables
  review:
    summary: Carbohydrate binding, the core molecular function, asserted by a primary study
      (PMID:9162064). Redundant with the EXP/IEA carbohydrate-binding annotations.
    action: ACCEPT
    reason: Core molecular function; well supported.
- term:
    id: GO:0005886
    label: plasma membrane
  evidence_type: TAS
  original_reference_id: PMID:9162064
  qualifier: located_in
  review:
    summary: Galectin-3 associates with the plasma membrane / cell surface (PMID:9162064),
      consistent with its extracellular lattice function after secretion.
    action: KEEP_AS_NON_CORE
    reason: Cell-surface association; consistent with secreted lattice function but not core.
- term:
    id: GO:0062093
    label: lysophagy
  evidence_type: IDA
  original_reference_id: PMID:32521192
  qualifier: involved_in
  review:
    summary: Cytosolic galectin-3 detects lysosomal membrane rupture by binding luminal
      glycans newly exposed to the cytosol, recruits and organizes ESCRT components
      (PDCD6IP/ALIX, CHMP4A, CHMPB) for membrane repair, and at later stages cooperates
      with TRIM16 to engage the autophagy machinery (ATG16L1, ATG13, LC3) in selective
      autophagic removal of severely damaged lysosomes (PMID:32521192, PMID:27693506).
      This glycan-damage-sensing lysophagy role is among the strongest intracellular
      functions of galectin-3 and is not currently represented in GOA; it is added here
      as a NEW annotation. The same machinery also mediates galectin-3-dependent
      secretory autophagy of alpha-synuclein after vesicular damage (PMID:34612142).
    action: NEW
    reason: Strongly supported intracellular function (damaged-endomembrane glycan
      sensing leading to ESCRT repair and TRIM16-dependent lysophagy) that is absent
      from the existing GOA annotations; added as a core glycan-sensing process.
    supported_by:
    - reference_id: PMID:32521192
      supporting_text: LGALS3 (galectin 3) detects
        membrane damage by detecting exposed lumenal glycosyl groups, recruits and
        organizes ESCRT components PDCD6IP/ALIX, CHMP4A, and CHMPB at damaged sites on
        the lysosomes, and facilitates ESCRT-driven repair of lysosomal membrane. At
        later stages, LGALS3 cooperates with TRIM16, an autophagy receptor-regulator, to
        engage autophagy machinery in removal of excessively damaged lysosomes.
    - reference_id: PMID:32521192
      supporting_text: The capacity of LGALS3 to recognize glycans is required to initiate autophagy in response to lysosomal damage.
core_functions:
- description: Beta-galactoside / N-acetyllactosamine binding by the C-terminal carbohydrate
    recognition domain (CRD). This is the defining, evolutionarily conserved molecular function
    of galectin-3 and the basis for essentially all of its downstream biology.
  molecular_function:
    id: GO:0030246
    label: carbohydrate binding
  supported_by:
  - reference_id: PMID:28973299
    supporting_text: epitopes for binding to three sites on 15N-labeled Gal-3, two within its
      carbohydrate recognition domain (CRD) and one at a novel site within the NT
  - reference_id: PMID:2402511
    supporting_text: hMac-2 synthesized in vitro is recognized by the M3/38 monoclonal
      antibody to Mac-2 and binds to the desialylated glycoprotein asialofetuin and to
      laminin, a major component of basement membranes
- description: Galactoside-specific recognition (lactose / LacNAc), the precise specificity of
    the galectin-3 CRD, the basis of its beta-galactoside specificity.
  molecular_function:
    id: GO:0016936
    label: galactoside binding
  locations:
  - id: GO:0009986
    label: cell surface
  - id: GO:0031012
    label: extracellular matrix
  supported_by:
  - reference_id: PMID:9582341
    supporting_text: We report here the x-ray crystal structure of the human galectin-3
      CRD, in complex with lactose and N-acetyllactosamine, at 2.1-A resolution
- description: Self-association and liquid-liquid phase separation driven by the intrinsically
    disordered N-terminal tail, which gives the monomeric galectin-3 functional multivalency and
    lets it scaffold glycoconjugate lattices/condensates and agglutinate (bridge) glycosylated
    cells and particles. This lattice-forming activity is the distinctive feature of galectin-3
    relative to other galectins.
  molecular_function:
    id: GO:0140693
    label: molecular condensate scaffold activity
  locations:
  - id: GO:0005737
    label: cytoplasm
  - id: GO:0005634
    label: nucleus
  - id: GO:0005576
    label: extracellular region
  supported_by:
  - reference_id: PMID:28893908
    supporting_text: galectin-3 can also undergo liquid-liquid phase separation
  - reference_id: PMID:32144274
    supporting_text: its N-terminal domain (NTD) undergoes LLPS driven by interactions between
      its aromatic residues
  - reference_id: PMID:41194217
    supporting_text: mutations in key residues that confer the liquid-liquid phase separation (LLPS)
      properties of Galectin-3 abrogates its mitochondrial relocalization, ULK1
      recruitment, and mitophagy, suggesting that the capacity to form biomolecular
      condensates around the damaged mitochondria is crucial for the mitophagy
      function of Galectin-3
- description: Glycan-based sensing of damaged endomembranes. Cytosolic galectin-3 uses
    its carbohydrate-recognition activity to detect ruptured endo/lysosomal membranes by
    binding luminal beta-galactoside glycans that become exposed on the cytosolic face,
    thereby marking the damaged compartment and mobilizing membrane repair (ESCRT) and
    selective autophagy (TRIM16-dependent lysophagy). This is a major intracellular role
    of galectin-3 and is mechanistically built on the same CRD carbohydrate-binding
    activity. (No dedicated 'damaged-endomembrane glycan sensor' MF term exists in GO;
    the role is represented here by the core carbohydrate-binding MF, with the lysophagy
    process captured in existing_annotations as GO:0062093.)
  molecular_function:
    id: GO:0030246
    label: carbohydrate binding
  locations:
  - id: GO:0005737
    label: cytoplasm
  supported_by:
  - reference_id: PMID:32521192
    supporting_text: LGALS3 (galectin 3) detects membrane damage by detecting exposed
      lumenal glycosyl groups
  - reference_id: PMID:32521192
    supporting_text: The capacity of LGALS3 to recognize glycans is required to initiate autophagy in response to lysosomal damage.
proposed_new_terms:
- proposed_name: galectin-glycan lattice assembly
  proposed_definition: The process of cross-linking multivalent glycoconjugates (glycoproteins
    and glycolipids) on a cell surface or in the extracellular matrix into an ordered,
    higher-order lattice by a galectin, regulating the residence time, clustering, and signaling
    of the cross-linked glycoproteins.
  justification: Galectin-3 (and other galectins) form 'galectin-glycan lattices' that retain
    receptors at the cell surface and modulate their endocytosis and signaling. Current GO terms
    (carbohydrate binding, molecular condensate scaffold activity, negative regulation of
    endocytosis, positive regulation of protein localization to plasma membrane) only capture
    facets of this distinctive, well-described mechanism, with no single term for the lattice
    assembly process itself.
  supported_by:
  - reference_id: PMID:32144274
    supporting_text: acting as a "bridge" to aggregate glycosylated molecules
- proposed_name: damaged endomembrane glycan sensor activity
  proposed_definition: Binding to luminal glycans that become exposed on the cytosolic face of
    ruptured endosomal or lysosomal membranes, marking the damaged compartment for autophagic
    clearance.
  justification: Galectin-3 (with TRIM16) senses ruptured endo/lysosomal membranes by recognizing
    newly exposed luminal glycans and mobilizes the autophagy machinery (lysophagy). This
    glycan-damage-sensing role is mechanistically distinct from generic carbohydrate binding and
    is increasingly central to galectin-3 biology, but is not represented by a dedicated MF term.
  supported_by:
  - reference_id: PMID:27693506
    supporting_text: Endomembrane Damage Homeostasis
  - reference_id: PMID:32521192
    supporting_text: LGALS3 (galectin 3) detects
        membrane damage by detecting exposed lumenal glycosyl groups
suggested_questions:
- question: Is the nuclear pre-mRNA splicing / RNA-binding role of galectin-3 a direct,
    sequence- or structure-specific RNA-binding activity, or an indirect association via
    glycosylated/RNP partners captured in proteome-wide screens?
- question: To what extent does liquid-liquid phase separation of the N-terminal domain operate
    intracellularly (e.g. in endomembrane-damage sensing) versus only in the extracellular
    agglutination context?
suggested_experiments:
- hypothesis: The carbohydrate-recognition activity of the CRD is required for galectin-3-mediated
    sensing of damaged endomembranes and recruitment of the autophagy machinery.
  description: Compare wild-type galectin-3 with a CRD point mutant (e.g. R186S, which abolishes
    beta-galactoside binding) for recruitment to ruptured lysosomes (induced by LLOMe or silica)
    and for co-recruitment of TRIM16/ATG16L1/BECN1, by live-cell imaging and co-IP.
  experiment_type: structure-function / mutagenesis with damage-induced autophagy assay
- hypothesis: N-terminal-domain-driven self-association/LLPS is necessary for galectin-3 lattice
    formation and the consequent retention of branched-N-glycan receptors at the cell surface.
  description: Compare full-length galectin-3 with N-terminal-tail deletion and aromatic-residue
    mutants (tryptophan/tyrosine substitutions that impair LLPS) for surface-receptor residence
    time (e.g. of GnT-V-modified receptors), lattice formation, and endocytosis rates.
  experiment_type: domain-deletion / point-mutation with quantitative cell-surface imaging