Top Bgee tissues and the reviewed annotations that explain them
Bgee release: Bgee 15.2. Top 10 non-redundant gold present calls per gene; explanation = a retained annotation whose GO anatomy contains (within), develops into (precursor) or lies inside (container) the tissue. Generated by scripts/explain_tissues.py; do not edit.
PAX6 (2/10 explained specifically, 10/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001812 palpebral conjunctiva | 99.5 | GO:0043010 camera-type eye development (within camera-type eye); GO:0001654 eye development (within eye, broad); GO:0007423 sensory organ development (within sense organ, broad) | |
| CL:0000169 type B pancreatic cell | 99.3 | GO:0003309 type B pancreatic cell differentiation (within type B pancreatic cell); GO:0003322 pancreatic A cell development (colocated pancreatic A cell) | |
| UBERON:0003053 ventricular zone | 99.3 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0005351 paraflocculus | 99.1 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0004023 ganglionic eminence | 98.5 | GO:0030900 forebrain development (precursor forebrain, broad); GO:0007420 brain development (precursor brain, broad); GO:0007417 central nervous system development (precursor central nervous system, broad) | |
| UBERON:0004720 cerebellar vermis | 97.8 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0014890 right hemisphere of cerebellum | 97.3 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0000988 pons | 95.2 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0002476 lateral globus pallidus | 93.2 | GO:0030900 forebrain development (within forebrain, broad); GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad) | |
| UBERON:0003881 CA1 field of hippocampus | 91.8 | GO:0021987 cerebral cortex development (within cerebral cortex, broad); GO:0030900 forebrain development (within forebrain, broad); GO:0007420 brain development (within brain, broad) |
ATOH1 (7/10 explained specifically, 7/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0004991 mucosa of transverse colon | 86.2 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0001052 rectum | 84.8 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0003454 small intestine Peyer's patch | 77.0 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0004993 mucosa of sigmoid colon | 71.3 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0002114 duodenum | 65.9 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0001154 vermiform appendix | 60.3 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0001153 caecum | 57.5 | GO:0060575 intestinal epithelial cell differentiation (colocated intestinal epithelial cell) | |
| UBERON:0002385 muscle tissue | 48.0 | unexplained | |
| UBERON:0035805 muscle layer of sigmoid colon | 40.6 | unexplained | |
| UBERON:0001043 esophagus | 24.7 | unexplained |
NEUROD1 (4/10 explained specifically, 8/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0005351 paraflocculus | 99.5 | GO:0021549 cerebellum development (within cerebellum); GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0004720 cerebellar vermis | 99.5 | GO:0021549 cerebellum development (within cerebellum); GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0014890 right hemisphere of cerebellum | 96.9 | GO:0021549 cerebellum development (within cerebellum); GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0000006 islet of Langerhans | 95.4 | GO:2000675 negative regulation of type B pancreatic cell apoptotic process (container type B pancreatic cell); GO:0031018 endocrine pancreas development (within endocrine pancreas); GO:0031016 pancreas development (within pancreas) | |
| UBERON:0004023 ganglionic eminence | 90.4 | GO:0048562 embryonic organ morphogenesis (within embryo, broad); GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0000988 pons | 88.6 | GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 84.7 | unexplained | |
| UBERON:0007023 adult organism | 84.1 | unexplained | |
| UBERON:0005343 cortical plate | 82.1 | GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0002771 middle temporal gyrus | 80.9 | GO:0007399 nervous system development (within nervous system, broad); GO:0022008 neurogenesis (within nervous system, broad) |
OLIG2 (9/10 explained specifically, 9/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0005363 inferior vagus X ganglion | 95.3 | unexplained | |
| UBERON:0001875 globus pallidus | 93.6 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0001876 amygdala | 93.0 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0002691 ventral tegmental area | 92.7 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0001906 subthalamic nucleus | 92.6 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0002038 substantia nigra | 92.4 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0006469 C1 segment of cervical spinal cord | 91.7 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0001954 Ammon's horn | 91.4 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0007227 superior vestibular nucleus | 91.1 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) | |
| UBERON:0001874 putamen | 91.0 | GO:0021778 oligodendrocyte cell fate specification (colocated oligodendrocyte); GO:0048709 oligodendrocyte differentiation (colocated oligodendrocyte) |
MITF (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001782 pigmented layer of retina | 99.2 | unexplained | |
| UBERON:0004502 skeletal muscle tissue of biceps brachii | 97.3 | unexplained | |
| UBERON:0002080 heart right ventricle | 97.3 | unexplained | |
| UBERON:0002000 gluteal muscle | 96.8 | unexplained | |
| UBERON:0002349 myocardium | 96.7 | unexplained | |
| UBERON:0004511 skeletal muscle tissue of rectus abdominis | 96.7 | unexplained | |
| UBERON:0001379 vastus lateralis | 96.6 | unexplained | |
| UBERON:0001476 deltoid | 96.3 | unexplained | |
| UBERON:0000057 urethra | 96.2 | unexplained | |
| UBERON:0000362 renal medulla | 96.2 | unexplained |
CRYAA (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0000082 adult mammalian kidney | 89.1 | unexplained | |
| UBERON:0001114 right lobe of liver | 80.0 | unexplained | |
| UBERON:0010533 metanephros cortex | 61.1 | unexplained | |
| UBERON:0002114 duodenum | 40.8 | unexplained | |
| UBERON:0000451 prefrontal cortex | 39.8 | unexplained | GO:0007601 visual perception |
| UBERON:0002436 primary visual cortex | 38.8 | unexplained | GO:0007601 visual perception |
| UBERON:0001871 temporal lobe | 37.4 | unexplained | GO:0007601 visual perception |
| UBERON:0001954 Ammon's horn | 36.3 | unexplained | GO:0007601 visual perception |
| UBERON:0009835 anterior cingulate cortex | 35.9 | unexplained | GO:0007601 visual perception |
| UBERON:0001873 caudate nucleus | 35.9 | unexplained | GO:0007601 visual perception |
INS (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| CL:0000169 type B pancreatic cell | 100.0 | unexplained | |
| UBERON:0001150 body of pancreas | 99.8 | unexplained | |
| UBERON:0001114 right lobe of liver | 64.3 | unexplained | |
| UBERON:0001233 right adrenal gland | 63.3 | unexplained | |
| UBERON:0001234 left adrenal gland | 62.3 | unexplained | |
| UBERON:0001235 adrenal cortex | 60.0 | unexplained | |
| UBERON:0012249 ectocervix | 59.6 | unexplained | |
| UBERON:0002345 descending thoracic aorta | 59.0 | unexplained | |
| UBERON:0001303 left uterine tube | 57.4 | unexplained | |
| UBERON:0001625 right coronary artery | 55.9 | unexplained |
GCG (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| CL:0000169 type B pancreatic cell | 100.0 | unexplained | |
| UBERON:0001150 body of pancreas | 99.0 | unexplained | |
| UBERON:0001052 rectum | 98.4 | unexplained | |
| UBERON:0004993 mucosa of sigmoid colon | 98.2 | unexplained | |
| UBERON:0000331 ileal mucosa | 95.1 | unexplained | |
| UBERON:0003454 small intestine Peyer's patch | 89.9 | unexplained | |
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 88.8 | unexplained | |
| UBERON:0004991 mucosa of transverse colon | 87.1 | unexplained | |
| UBERON:0000397 colonic epithelium | 76.7 | unexplained | |
| UBERON:0000399 jejunal mucosa | 71.7 | unexplained |
ALB (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001114 right lobe of liver | 100.0 | unexplained | |
| UBERON:0001150 body of pancreas | 99.5 | unexplained | |
| UBERON:0000082 adult mammalian kidney | 96.0 | unexplained | |
| UBERON:0001231 nephron tubule | 95.5 | unexplained | |
| UBERON:0000006 islet of Langerhans | 95.0 | unexplained | |
| UBERON:0000397 colonic epithelium | 93.3 | unexplained | |
| UBERON:0000074 renal glomerulus | 93.2 | unexplained | |
| UBERON:0018303 adrenal tissue | 90.6 | unexplained | |
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 87.8 | unexplained | |
| UBERON:0010533 metanephros cortex | 86.8 | unexplained |
HNF1A (2/10 explained specifically, 2/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001114 right lobe of liver | 88.2 | GO:0001889 liver development (within liver) | |
| UBERON:0004991 mucosa of transverse colon | 85.7 | unexplained | |
| UBERON:0000082 adult mammalian kidney | 78.0 | unexplained | |
| UBERON:0002114 duodenum | 77.8 | unexplained | |
| UBERON:0001150 body of pancreas | 77.6 | GO:0031016 pancreas development (within pancreas) | |
| UBERON:0003454 small intestine Peyer's patch | 74.8 | unexplained | |
| UBERON:0000399 jejunal mucosa | 74.8 | unexplained | |
| CL:0000655 secondary oocyte | 74.3 | unexplained | |
| UBERON:0010533 metanephros cortex | 71.2 | unexplained | |
| UBERON:0001161 body of stomach | 70.8 | unexplained |
GATA1 (1/10 explained specifically, 5/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002483 trabecular bone tissue | 85.7 | unexplained | |
| UBERON:0000178 blood | 85.3 | GO:0043306 positive regulation of mast cell degranulation (colocated leukocyte, broad) | |
| UBERON:0002371 bone marrow | 82.2 | GO:0043306 positive regulation of mast cell degranulation (colocated leukocyte, broad) | |
| CL:0000576 monocyte | 81.2 | GO:0043306 positive regulation of mast cell degranulation (within leukocyte, broad) | |
| CL:0000094 granulocyte | 70.1 | GO:0030222 eosinophil differentiation (container eosinophil); GO:0035854 eosinophil fate commitment (container eosinophil); GO:0043306 positive regulation of mast cell degranulation (within leukocyte, broad) | |
| UBERON:0002167 right lung | 68.1 | unexplained | |
| UBERON:0008952 upper lobe of left lung | 63.4 | unexplained | |
| UBERON:0002106 spleen | 58.9 | GO:0043306 positive regulation of mast cell degranulation (colocated leukocyte, broad) | |
| UBERON:0002110 gall bladder | 56.2 | unexplained | |
| UBERON:0035833 lower esophagus muscularis layer | 53.1 | unexplained |
TH (0/10 explained specifically, 4/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001966 substantia nigra pars reticulata | 94.9 | GO:0007601 visual perception (within nervous system, broad); GO:0007612 learning (within nervous system, broad); GO:0007613 memory (within nervous system, broad) | |
| UBERON:0001965 substantia nigra pars compacta | 93.2 | GO:0007601 visual perception (within nervous system, broad); GO:0007612 learning (within nervous system, broad); GO:0007613 memory (within nervous system, broad) | |
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 86.7 | unexplained | |
| UBERON:0001233 right adrenal gland | 76.8 | unexplained | |
| UBERON:0001898 hypothalamus | 76.7 | GO:0007601 visual perception (within nervous system, broad); GO:0007612 learning (within nervous system, broad); GO:0007613 memory (within nervous system, broad) | |
| UBERON:0001234 left adrenal gland | 76.3 | unexplained | |
| UBERON:0001235 adrenal cortex | 72.2 | unexplained | |
| CL:0000670 ∩ UBERON:0000991 primordial germ cell in gonad | 72.0 | unexplained | |
| UBERON:0001873 caudate nucleus | 71.7 | GO:0007601 visual perception (within nervous system, broad); GO:0007612 learning (within nervous system, broad); GO:0007613 memory (within nervous system, broad) | |
| UBERON:0001114 right lobe of liver | 68.4 | unexplained |
FOXN1 (0/10 explained specifically, 4/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001949 gingival epithelium | 91.6 | GO:0030858 positive regulation of epithelial cell differentiation (colocated epithelial cell, broad); GO:0008544 epidermis development (within tissue, broad) | |
| UBERON:0004262 upper leg skin | 91.2 | unexplained | |
| UBERON:0035834 lower esophagus mucosa | 89.2 | unexplained | |
| UBERON:0001416 skin of abdomen | 89.0 | unexplained | |
| UBERON:0000989 penis | 87.9 | GO:0030858 positive regulation of epithelial cell differentiation (colocated epithelial cell, broad) | |
| UBERON:0006920 esophagus squamous epithelium | 87.2 | GO:0030858 positive regulation of epithelial cell differentiation (colocated epithelial cell, broad); GO:0008544 epidermis development (within tissue, broad) | |
| UBERON:0001554 skin of hip | 85.8 | unexplained | |
| UBERON:0000997 mammalian vulva | 83.4 | unexplained | |
| UBERON:0002030 nipple | 82.4 | GO:0030858 positive regulation of epithelial cell differentiation (colocated epithelial cell, broad) | |
| UBERON:0000167 oral cavity | 80.8 | unexplained |
AIRE (0/10 explained specifically, 2/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 73.2 | unexplained | |
| UBERON:0001898 hypothalamus | 67.8 | unexplained | |
| UBERON:0003027 cingulate cortex | 63.2 | unexplained | |
| UBERON:0000029 lymph node | 61.8 | GO:0002507 tolerance induction (within immune system, broad); GO:0002509 central tolerance induction to self antigen (within immune system, broad) | |
| CL:0000094 granulocyte | 60.8 | GO:0002507 tolerance induction (within immune system, broad); GO:0002509 central tolerance induction to self antigen (within immune system, broad) | |
| UBERON:0001882 nucleus accumbens | 59.6 | unexplained | |
| UBERON:0002810 right frontal lobe | 59.4 | unexplained | |
| UBERON:0002038 substantia nigra | 58.7 | unexplained | |
| UBERON:0009834 dorsolateral prefrontal cortex | 58.4 | unexplained | |
| UBERON:0004991 mucosa of transverse colon | 58.3 | unexplained |
GBX2 (0/10 explained specifically, 7/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| CL:0000670 ∩ UBERON:0000991 primordial germ cell in gonad | 80.4 | unexplained | |
| CL:0000089 ∩ UBERON:0000473 male germ line stem cell (sensu Vertebrata) in testis | 75.8 | unexplained | |
| UBERON:0001874 putamen | 65.2 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| CL:0002255 stromal cell of endometrium | 63.2 | unexplained | |
| UBERON:0001873 caudate nucleus | 61.1 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| UBERON:0006469 C1 segment of cervical spinal cord | 58.3 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| UBERON:0001898 hypothalamus | 56.8 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| UBERON:0001882 nucleus accumbens | 54.8 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| UBERON:0002038 substantia nigra | 52.3 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) | |
| UBERON:0014890 right hemisphere of cerebellum | 51.1 | GO:0007399 nervous system development (within nervous system, broad); GO:0051960 regulation of nervous system development (within nervous system, broad) |
FGF8 (6/10 explained specifically, 7/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| CL:0000670 ∩ UBERON:0000991 primordial germ cell in gonad | 79.8 | unexplained | |
| UBERON:0013540 Brodmann (1909) area 9 | 59.2 | GO:0021884 forebrain neuron development (colocated neuron of the forebrain); GO:0021954 central nervous system neuron development (colocated central nervous system neuron); GO:0022008 neurogenesis (within nervous system, broad) | |
| CL:0000576 monocyte | 58.1 | GO:0060348 bone development (precursor bone element, broad) | |
| UBERON:0009835 anterior cingulate cortex | 56.9 | GO:0021884 forebrain neuron development (colocated neuron of the forebrain); GO:0021954 central nervous system neuron development (colocated central nervous system neuron); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0002810 right frontal lobe | 54.6 | GO:0021884 forebrain neuron development (colocated neuron of the forebrain); GO:0021954 central nervous system neuron development (colocated central nervous system neuron); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0035834 lower esophagus mucosa | 54.2 | unexplained | |
| UBERON:0002436 primary visual cortex | 51.9 | GO:0021884 forebrain neuron development (colocated neuron of the forebrain); GO:0021954 central nervous system neuron development (colocated central nervous system neuron); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0001898 hypothalamus | 50.9 | GO:0021884 forebrain neuron development (colocated neuron of the forebrain); GO:0021954 central nervous system neuron development (colocated central nervous system neuron); GO:0022008 neurogenesis (within nervous system, broad) | |
| UBERON:0000178 blood | 48.5 | unexplained | |
| UBERON:0004534 right testis | 48.1 | GO:0008406 gonad development (within gonad) |
PTF1A (2/10 explained specifically, 5/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001150 body of pancreas | 97.6 | GO:0031016 pancreas development (within pancreas) | |
| UBERON:0000006 islet of Langerhans | 68.0 | GO:0031016 pancreas development (within pancreas) | |
| CL:0000670 ∩ UBERON:0000991 primordial germ cell in gonad | 67.0 | unexplained | |
| UBERON:0001161 body of stomach | 60.1 | unexplained | |
| UBERON:0004534 right testis | 59.2 | unexplained | |
| UBERON:0004533 left testis | 59.0 | unexplained | |
| UBERON:0013540 Brodmann (1909) area 9 | 58.3 | GO:0048699 generation of neurons (within nervous system, broad) | |
| UBERON:0001160 fundus of stomach | 58.3 | unexplained | |
| UBERON:0001874 putamen | 57.7 | GO:0048699 generation of neurons (within nervous system, broad) | |
| UBERON:0001882 nucleus accumbens | 56.9 | GO:0048699 generation of neurons (within nervous system, broad) |
RORA (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0004262 upper leg skin | 99.5 | unexplained | |
| UBERON:0002736 lateral nuclear group of thalamus | 99.1 | unexplained | |
| UBERON:0001554 skin of hip | 99.0 | unexplained | |
| UBERON:0002030 nipple | 98.1 | unexplained | |
| UBERON:0000997 mammalian vulva | 97.0 | unexplained | |
| UBERON:0004511 skeletal muscle tissue of rectus abdominis | 97.0 | unexplained | |
| UBERON:0001507 biceps brachii | 96.8 | unexplained | |
| UBERON:0018303 adrenal tissue | 96.8 | unexplained | |
| UBERON:0004263 upper arm skin | 96.4 | unexplained | |
| UBERON:0000979 tibia | 96.4 | unexplained |
RELN (0/10 explained specifically, 8/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002264 olfactory bulb | 99.1 | GO:0021800 cerebral cortex tangential migration (within telencephalon, broad); GO:0021819 layer formation in cerebral cortex (within telencephalon, broad); GO:0007420 brain development (within brain, broad) | |
| UBERON:0004720 cerebellar vermis | 98.9 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007612 learning (within nervous system, broad) | |
| UBERON:0002245 cerebellar hemisphere | 98.6 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007612 learning (within nervous system, broad) | |
| UBERON:0000044 dorsal root ganglion | 98.1 | GO:0007612 learning (within nervous system, broad); GO:0007616 long-term memory (within nervous system, broad); GO:0008306 associative learning (within nervous system, broad) | |
| UBERON:0001675 trigeminal ganglion | 98.1 | GO:0007612 learning (within nervous system, broad); GO:0007616 long-term memory (within nervous system, broad); GO:0008306 associative learning (within nervous system, broad) | |
| CL:0000115 endothelial cell | 94.9 | unexplained | |
| UBERON:0001323 tibial nerve | 94.1 | GO:0007612 learning (within nervous system, broad); GO:0007616 long-term memory (within nervous system, broad); GO:0008306 associative learning (within nervous system, broad) | |
| UBERON:0000988 pons | 94.1 | GO:0007420 brain development (within brain, broad); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007612 learning (within nervous system, broad) | |
| UBERON:0015488 sural nerve | 93.7 | GO:0007612 learning (within nervous system, broad); GO:0007616 long-term memory (within nervous system, broad); GO:0008306 associative learning (within nervous system, broad) | |
| CL:0000083 epithelial cell of pancreas | 91.9 | unexplained |
SHH (2/10 explained specifically, 7/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001114 right lobe of liver | 85.7 | GO:0060684 epithelial-mesenchymal cell signaling (colocated epithelial cell, broad) | |
| UBERON:0015488 sural nerve | 83.9 | GO:0030326 embryonic limb morphogenesis (within limb, broad); GO:0042733 embryonic digit morphogenesis (within limb, broad) | |
| UBERON:0001323 tibial nerve | 80.7 | GO:0030326 embryonic limb morphogenesis (within limb, broad); GO:0042733 embryonic digit morphogenesis (within limb, broad) | |
| UBERON:0035827 right adrenal gland cortex | 80.1 | unexplained | |
| UBERON:0035825 left adrenal gland cortex | 78.0 | unexplained | |
| UBERON:0010533 metanephros cortex | 74.3 | GO:0001656 metanephros development (within metanephros); GO:0060684 epithelial-mesenchymal cell signaling (colocated epithelial cell, broad) | |
| UBERON:0004991 mucosa of transverse colon | 72.8 | GO:0001569 branching involved in blood vessel morphogenesis (within tube, broad); GO:0001658 branching involved in ureteric bud morphogenesis (within tube, broad); GO:0048754 branching morphogenesis of an epithelial tube (within tube, broad) | |
| UBERON:0002110 gall bladder | 72.7 | GO:0060684 epithelial-mesenchymal cell signaling (colocated epithelial cell, broad) | |
| UBERON:0001255 urinary bladder | 72.5 | GO:0060684 epithelial-mesenchymal cell signaling (colocated mesenchymal cell); GO:2000729 positive regulation of mesenchymal cell proliferation involved in ureter development (colocated mesenchymal cell) | |
| UBERON:0000044 dorsal root ganglion | 70.3 | unexplained |
SMO (0/10 explained specifically, 5/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0003053 ventricular zone | 94.3 | GO:0007417 central nervous system development (within central nervous system, broad) | |
| UBERON:0002119 left ovary | 90.0 | unexplained | |
| UBERON:0002118 right ovary | 89.7 | unexplained | |
| UBERON:0004023 ganglionic eminence | 89.4 | GO:0048853 forebrain morphogenesis (precursor forebrain, broad); GO:0007417 central nervous system development (precursor central nervous system, broad) | |
| UBERON:0000458 endocervix | 89.2 | unexplained | |
| UBERON:0012249 ectocervix | 87.8 | GO:0090190 positive regulation of branching involved in ureteric bud morphogenesis (within tube, broad) | |
| UBERON:0009853 body of uterus | 87.5 | GO:0090190 positive regulation of branching involved in ureteric bud morphogenesis (within tube, broad) | |
| UBERON:0002196 adenohypophysis | 87.1 | GO:0048853 forebrain morphogenesis (within forebrain, broad); GO:0007417 central nervous system development (within central nervous system, broad) | |
| UBERON:0001114 right lobe of liver | 87.1 | unexplained | |
| UBERON:0010533 metanephros cortex | 86.5 | unexplained |
FBXO41 (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0003881 CA1 field of hippocampus | 96.9 | unexplained | |
| UBERON:0004167 orbitofrontal cortex | 95.6 | unexplained | |
| UBERON:0006483 Brodmann (1909) area 46 | 95.4 | unexplained | |
| UBERON:0004720 cerebellar vermis | 95.2 | unexplained | |
| UBERON:0002661 superior frontal gyrus | 94.8 | unexplained | |
| UBERON:0002581 postcentral gyrus | 94.6 | unexplained | |
| UBERON:0002728 entorhinal cortex | 93.9 | unexplained | |
| UBERON:0002810 right frontal lobe | 93.7 | unexplained | |
| UBERON:0000451 prefrontal cortex | 93.2 | unexplained | |
| UBERON:0003027 cingulate cortex | 93.1 | unexplained |
DNER (1/10 explained specifically, 9/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002736 lateral nuclear group of thalamus | 99.3 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0004720 cerebellar vermis | 99.3 | GO:0021590 cerebellum maturation (within cerebellum); GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0001966 substantia nigra pars reticulata | 99.2 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0001965 substantia nigra pars compacta | 99.1 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0001831 parotid gland | 98.9 | unexplained | |
| UBERON:0001906 subthalamic nucleus | 98.7 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0002476 lateral globus pallidus | 98.7 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0005363 inferior vagus X ganglion | 98.5 | GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0007227 superior vestibular nucleus | 98.4 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) | |
| UBERON:0002477 medial globus pallidus | 98.3 | GO:0007417 central nervous system development (within central nervous system, broad); GO:0007399 nervous system development (within nervous system, broad) |
PTPN11 (0/10 explained specifically, 8/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002477 medial globus pallidus | 99.3 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0002870 dorsal motor nucleus of vagus nerve | 99.3 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0013554 Brodmann (1909) area 23 | 99.0 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0002401 visceral pleura | 99.0 | unexplained | |
| UBERON:0002400 parietal pleura | 98.9 | unexplained | |
| UBERON:0001906 subthalamic nucleus | 98.9 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0001966 substantia nigra pars reticulata | 98.8 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0002127 inferior olivary complex | 98.8 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0003911 choroid plexus epithelium | 98.8 | GO:0007420 brain development (within brain, broad) | |
| UBERON:0002476 lateral globus pallidus | 98.7 | GO:0007420 brain development (within brain, broad) |
EN1 (2/10 explained specifically, 5/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001966 substantia nigra pars reticulata | 83.4 | GO:0030901 midbrain development (within midbrain); GO:0008344 adult locomotory behavior (within nervous system, broad); GO:0035176 social behavior (within nervous system, broad) | |
| UBERON:0001511 skin of leg | 79.7 | GO:0030326 embryonic limb morphogenesis (within limb, broad) | |
| UBERON:0001388 gastrocnemius | 79.2 | GO:0030326 embryonic limb morphogenesis (within limb, broad) | |
| UBERON:0004252 hindlimb stylopod muscle | 78.6 | GO:0030326 embryonic limb morphogenesis (within limb, broad) | |
| UBERON:0001965 substantia nigra pars compacta | 78.4 | GO:0030901 midbrain development (within midbrain); GO:0008344 adult locomotory behavior (within nervous system, broad); GO:0035176 social behavior (within nervous system, broad) | |
| UBERON:0001416 skin of abdomen | 76.2 | unexplained | |
| UBERON:0001554 skin of hip | 76.2 | unexplained | |
| UBERON:0001134 skeletal muscle tissue | 71.3 | unexplained | |
| UBERON:0002190 subcutaneous adipose tissue | 69.7 | unexplained | |
| UBERON:0000029 lymph node | 60.2 | unexplained |
EN2 (1/10 explained specifically, 1/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002129 cerebellar cortex | 88.5 | GO:0021587 cerebellum morphogenesis (within cerebellum) | |
| UBERON:0004252 hindlimb stylopod muscle | 60.5 | unexplained | |
| UBERON:0002038 substantia nigra | 59.5 | unexplained | |
| UBERON:0001295 endometrium | 54.2 | unexplained | |
| UBERON:0007023 adult organism | 53.7 | unexplained | |
| UBERON:0001388 gastrocnemius | 51.4 | unexplained | |
| UBERON:0002119 left ovary | 51.1 | unexplained | |
| UBERON:0006469 C1 segment of cervical spinal cord | 50.6 | unexplained | |
| UBERON:0002118 right ovary | 49.3 | unexplained | |
| UBERON:0004358 caput epididymis | 47.1 | unexplained |
G6PC1 (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0001114 right lobe of liver | 98.0 | unexplained | |
| UBERON:0001231 nephron tubule | 91.9 | unexplained | |
| UBERON:0000399 jejunal mucosa | 90.3 | unexplained | |
| UBERON:0000082 adult mammalian kidney | 82.9 | unexplained | |
| UBERON:0002114 duodenum | 76.0 | unexplained | |
| UBERON:0001225 cortex of kidney | 73.9 | unexplained | |
| UBERON:0000331 ileal mucosa | 72.6 | unexplained | |
| UBERON:0000362 renal medulla | 72.1 | unexplained | |
| UBERON:0002110 gall bladder | 72.1 | unexplained | |
| UBERON:0007023 adult organism | 70.2 | unexplained |
G6PC3 (0/10 explained specifically, 0/10 at all)
| Bgee tissue | score | explained by (retained) | only a rejected row would explain |
|---|---|---|---|
| UBERON:0002196 adenohypophysis | 97.6 | unexplained | |
| UBERON:0001233 right adrenal gland | 97.0 | unexplained | |
| UBERON:0001234 left adrenal gland | 96.9 | unexplained | |
| UBERON:0006469 C1 segment of cervical spinal cord | 96.7 | unexplained | |
| UBERON:0001235 adrenal cortex | 96.4 | unexplained | |
| UBERON:0001119 right lobe of thyroid gland | 96.4 | unexplained | |
| UBERON:0010533 metanephros cortex | 96.4 | unexplained | |
| CL:0002255 stromal cell of endometrium | 96.2 | unexplained | |
| UBERON:0001120 left lobe of thyroid gland | 96.2 | unexplained | |
| UBERON:0002098 apex of heart | 95.8 | unexplained |