Reactome Inventory Results

Reactome Inventory Results

Back to Reactome-GO Alignment

Generated by inventory_reactome.py from local gene reviews, module YAMLs, cached Reactome records, and gocams/index.tsv.

Headline Counts

Inventory Rows Distinct Reactome IDs
Gene-review existing annotations 16334 6660
Module source citations 325 279
Human GO-CAM activities 5604 n/a
Human GO-CAM activities overlapping Reactome-citing modules 92 n/a

Gene-Review Rows By Aspect

Aspect Rows
CC 14734
MF 905
BP 691
UNKNOWN 4

Gene-Review Rows By Action

Review action Rows
ACCEPT 13124
KEEP_AS_NON_CORE 2616
MARK_AS_OVER_ANNOTATED 248
MODIFY 193
REMOVE 100
UNDECIDED 45
NEW 8

Gene-Review Rows By Organism

Organism Rows
human 15900
mouse 328
rat 37
yeast 32
DROME 24
KLEPN 6
worm 4
SCHPO 3

Reactome-Rich Modules

Module Unique Reactome IDs Source rows
adrenal_steroidogenesis 14 14
urea_cycle 9 9
heparan_sulfate_lysosomal_degradation 8 8
phosphocreatine_shuttle 7 10
cobalamin_absorption_transport 7 9
n_glycan_llo_assembly_lumenal 7 8
cholesterol_synthesis_post_lanosterol 7 7
de_novo_pyrimidine_synthesis 7 7
glycosphingolipid_lysosomal_degradation 6 7
bile_acid_synthesis_sidechain_conjugation 6 6

Output Tables